gsm,organ,disease_status,disease_ontology_names,tissue_ontology_name,sample_kind,organism,organism_common_name,life_stage,sex,platform,assay_name,has_image,image_stain,n_obs,study_title,published_gse,gse,organism_taxon_id,organisms,organism_taxon_ids,co_detected_organisms,xenograft,multi_species,organism_basis,organism_raw,feature_species,organ_source,tissue_ontology_id,tissue_raw,disease_ontology_ids,disease_status_source,disease_raw,condition_raw,life_stage_source,life_stage_luna,age_raw,sex_source,sex_raw,donor_key,donor_id_raw,preservation,preservation_raw,platform_basis,assay_type,technology_raw,panel_name,instrument_software,observation_unit,n_vars,expression_state,coordinate_units,um_per_unit,um_basis,image_um_per_px,image_registration,segmentation,molecules,flags,qc_flags,verification,review_decision,review_category,review_notes,pubmed_ids,dois,content_group,group_kind,aliases,split,source_pipeline,sample_dir,annotation_version,annotation_confidence,annotation_low_confidence,metadata_flags
GSM3036911,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,956,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,GSE111672,GSE111672,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreatic adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,spatial transcriptomics,,,spot,25753,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31932730,,GSM3036911,,,val,sda-all,samples/GSE111672/GSM3036911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM3405534,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,996,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,GSE111672,GSE111672,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreatic adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,spatial transcriptomics,,,spot,16528,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31932730,,GSM3405534,,,val,sda-all,samples/GSE111672/GSM3405534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100721,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,316,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,GSE111672,GSE111672,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreatic adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,spatial transcriptomics,,,spot,19738,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31932730,,GSM4100721,,,val,sda-all,samples/GSE111672/GSM4100721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100722,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,288,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,GSE111672,GSE111672,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreatic adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,spatial transcriptomics,,,spot,19738,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31932730,,GSM4100722,,,val,sda-all,samples/GSE111672/GSM4100722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100723,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,321,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,GSE111672,GSE111672,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreatic adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,spatial transcriptomics,,,spot,19738,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31932730,,GSM4100723,,,val,sda-all,samples/GSE111672/GSM4100723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100724,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,242,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,GSE111672,GSE111672,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreatic adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,spatial transcriptomics,,,spot,19738,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31932730,,GSM4100724,,,val,sda-all,samples/GSE111672/GSM4100724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100726,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,359,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,GSE111672,GSE111672,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreatic adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,spatial transcriptomics,,,spot,19738,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31932730,,GSM4100726,,,val,sda-all,samples/GSE111672/GSM4100726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4100728,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,288,Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas,GSE111672,GSE111672,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreatic adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,spatial transcriptomics,,,spot,19738,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31932730,,GSM4100728,,,val,sda-all,samples/GSE111672/GSM4100728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM3399129,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,52,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:771,771,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,11353,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399129,,,train,sda-all,samples/GSE120374/GSM3399129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399130,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,62,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:771,771,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,11633,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399130,,,train,sda-all,samples/GSE120374/GSM3399130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.49}",disease_status;life_stage,low_confidence_annotation
GSM3399131,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,57,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:771,771,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,10784,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399131,,,train,sda-all,samples/GSE120374/GSM3399131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM3399132,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,54,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:771,771,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,11245,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399132,,,train,sda-all,samples/GSE120374/GSM3399132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM3399133,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,99,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:771,771,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13176,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399133,,,train,sda-all,samples/GSE120374/GSM3399133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399134,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,59,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:771,771,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,11099,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399134,,,train,sda-all,samples/GSE120374/GSM3399134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM3399135,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,62,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:771,771,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,11652,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399135,,,train,sda-all,samples/GSE120374/GSM3399135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM3399136,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,91,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p100,extracted field,male,GSE120374:652,652,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12391,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399136,,,train,sda-all,samples/GSE120374/GSM3399136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM3399137,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,97,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:652,652,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,11607,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399137,,,train,sda-all,samples/GSE120374/GSM3399137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM3399138,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,99,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p100,extracted field,male,GSE120374:652,652,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13046,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399138,,,train,sda-all,samples/GSE120374/GSM3399138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399139,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,78,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:664,664,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12955,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399139,,,train,sda-all,samples/GSE120374/GSM3399139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM3399140,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,81,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:664,664,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12381,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399140,,,train,sda-all,samples/GSE120374/GSM3399140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399141,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,82,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:664,664,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,11596,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399141,,,train,sda-all,samples/GSE120374/GSM3399141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM3399142,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,89,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:636,636,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12460,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399142,,,train,sda-all,samples/GSE120374/GSM3399142,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM3399143,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,88,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:636,636,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12385,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399143,,,train,sda-all,samples/GSE120374/GSM3399143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399144,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,72,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:672,672,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12038,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399144,,,train,sda-all,samples/GSE120374/GSM3399144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM3399145,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,86,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:672,672,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13040,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399145,,,train,sda-all,samples/GSE120374/GSM3399145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM3399146,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,87,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:635,635,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,11807,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399146,,,train,sda-all,samples/GSE120374/GSM3399146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM3399147,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,82,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:635,635,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,11193,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399147,,,train,sda-all,samples/GSE120374/GSM3399147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399148,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,99,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:635,635,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12765,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399148,,,train,sda-all,samples/GSE120374/GSM3399148,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399149,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,101,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:2465,2465,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12631,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399149,,,train,sda-all,samples/GSE120374/GSM3399149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.42}",disease_status;life_stage,low_confidence_annotation
GSM3399150,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,138,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:2476,2476,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14215,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399150,,,train,sda-all,samples/GSE120374/GSM3399150,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399151,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,112,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:2476,2476,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13113,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399151,,,train,sda-all,samples/GSE120374/GSM3399151,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM3399152,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,123,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:2476,2476,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13237,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399152,,,train,sda-all,samples/GSE120374/GSM3399152,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399153,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,121,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:2476,2476,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13591,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399153,,,train,sda-all,samples/GSE120374/GSM3399153,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM3399154,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,146,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:2476,2476,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13700,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399154,,,train,sda-all,samples/GSE120374/GSM3399154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM3399155,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,137,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:769,769,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13678,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399155,,,train,sda-all,samples/GSE120374/GSM3399155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399156,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,157,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:769,769,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13426,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399156,,,train,sda-all,samples/GSE120374/GSM3399156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399157,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,158,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:769,769,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12957,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399157,,,train,sda-all,samples/GSE120374/GSM3399157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM3399158,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,158,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p100,extracted field,male,GSE120374:651,651,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12902,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399158,,,train,sda-all,samples/GSE120374/GSM3399158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM3399159,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,165,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:651,651,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13467,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399159,,,train,sda-all,samples/GSE120374/GSM3399159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM3399160,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,182,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:2524,2524,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13250,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399160,,,train,sda-all,samples/GSE120374/GSM3399160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.39}",disease_status;life_stage,low_confidence_annotation
GSM3399161,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,161,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:2524,2524,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13208,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399161,,,train,sda-all,samples/GSE120374/GSM3399161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.53}",disease_status;life_stage,low_confidence_annotation
GSM3399162,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,107,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:2524,2524,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12777,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399162,,,train,sda-all,samples/GSE120374/GSM3399162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.43}",disease_status;life_stage,low_confidence_annotation
GSM3399163,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,258,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1055,1055,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13707,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399163,,,train,sda-all,samples/GSE120374/GSM3399163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM3399164,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,270,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1055,1055,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13822,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399164,,,train,sda-all,samples/GSE120374/GSM3399164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.81}",,
GSM3399165,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,151,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1056,1056,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14217,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399165,,,train,sda-all,samples/GSE120374/GSM3399165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399166,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,161,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1056,1056,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15064,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399166,,,train,sda-all,samples/GSE120374/GSM3399166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM3399167,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,179,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1056,1056,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14970,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399167,,,train,sda-all,samples/GSE120374/GSM3399167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM3399168,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,268,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:1057,1057,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15313,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399168,,,train,sda-all,samples/GSE120374/GSM3399168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM3399169,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,243,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1057,1057,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14577,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399169,,,train,sda-all,samples/GSE120374/GSM3399169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.79}",,
GSM3399170,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,186,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1057,1057,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14632,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399170,,,train,sda-all,samples/GSE120374/GSM3399170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399171,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,198,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1057,1057,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14227,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399171,,,train,sda-all,samples/GSE120374/GSM3399171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM3399172,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,301,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1058,1058,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14047,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399172,,,train,sda-all,samples/GSE120374/GSM3399172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM3399173,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,220,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1058,1058,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13528,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399173,,,train,sda-all,samples/GSE120374/GSM3399173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM3399174,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,272,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:973,973,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14618,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399174,,,train,sda-all,samples/GSE120374/GSM3399174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399175,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,273,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:974,974,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14023,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399175,,,train,sda-all,samples/GSE120374/GSM3399175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM3399176,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,157,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:1087,1087,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15349,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399176,,,train,sda-all,samples/GSE120374/GSM3399176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM3399177,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,173,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:1087,1087,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15398,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399177,,,train,sda-all,samples/GSE120374/GSM3399177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM3399178,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,355,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:1087,1087,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15627,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399178,,,train,sda-all,samples/GSE120374/GSM3399178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.45}",disease_status;life_stage,low_confidence_annotation
GSM3399179,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,299,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:1087,1087,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14635,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399179,,,train,sda-all,samples/GSE120374/GSM3399179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.43}",disease_status;life_stage,low_confidence_annotation
GSM3399180,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,301,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:975,975,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15189,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399180,,,train,sda-all,samples/GSE120374/GSM3399180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM3399181,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,372,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:975,975,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14900,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399181,,,train,sda-all,samples/GSE120374/GSM3399181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399182,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,405,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:975,975,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14837,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399182,,,train,sda-all,samples/GSE120374/GSM3399182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM3399183,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,305,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:975,975,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14866,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399183,,,train,sda-all,samples/GSE120374/GSM3399183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM3399184,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,322,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:975,975,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14831,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399184,,,train,sda-all,samples/GSE120374/GSM3399184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM3399185,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,231,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:976,976,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13684,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399185,,,train,sda-all,samples/GSE120374/GSM3399185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM3399186,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,240,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:976,976,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14310,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399186,,,train,sda-all,samples/GSE120374/GSM3399186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM3399187,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,259,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:976,976,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13840,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399187,,,train,sda-all,samples/GSE120374/GSM3399187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM3399188,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,262,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:976,976,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14390,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399188,,,train,sda-all,samples/GSE120374/GSM3399188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399189,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,349,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:1037,1037,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13544,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399189,,,train,sda-all,samples/GSE120374/GSM3399189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399190,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,320,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1040,1040,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14282,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399190,,,train,sda-all,samples/GSE120374/GSM3399190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399191,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,238,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1040,1040,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14169,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399191,,,train,sda-all,samples/GSE120374/GSM3399191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399192,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,344,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p70,extracted field,female,GSE120374:1241,1241,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15413,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399192,,,train,sda-all,samples/GSE120374/GSM3399192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",disease_status,low_confidence_annotation
GSM3399193,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,307,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,neonatal or infant,p70,extracted field,female,GSE120374:1241,1241,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15682,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399193,,,train,sda-all,samples/GSE120374/GSM3399193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM3399194,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,288,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p70,extracted field,female,GSE120374:1241,1241,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15368,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399194,,,train,sda-all,samples/GSE120374/GSM3399194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM3399195,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,232,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p70,extracted field,female,GSE120374:1241,1241,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15033,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399195,,,train,sda-all,samples/GSE120374/GSM3399195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",disease_status,low_confidence_annotation
GSM3399196,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,241,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p70,extracted field,female,GSE120374:1241,1241,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15268,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399196,,,train,sda-all,samples/GSE120374/GSM3399196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",disease_status,low_confidence_annotation
GSM3399197,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,219,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,neonatal or infant,p70,extracted field,female,GSE120374:1241,1241,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14911,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399197,,,train,sda-all,samples/GSE120374/GSM3399197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM3399198,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,197,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1277,1277,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15408,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399198,,,train,sda-all,samples/GSE120374/GSM3399198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM3399199,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,219,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1277,1277,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14699,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399199,,,train,sda-all,samples/GSE120374/GSM3399199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM3399200,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,108,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1277,1277,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15510,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399200,,,train,sda-all,samples/GSE120374/GSM3399200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM3399201,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,124,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1277,1277,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15082,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399201,,,train,sda-all,samples/GSE120374/GSM3399201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM3399202,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,147,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1277,1277,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15170,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399202,,,train,sda-all,samples/GSE120374/GSM3399202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM3399203,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,270,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:1298,1298,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15857,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399203,,,train,sda-all,samples/GSE120374/GSM3399203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM3399204,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,200,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:1298,1298,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15800,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399204,,,train,sda-all,samples/GSE120374/GSM3399204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM3399205,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,236,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:1298,1298,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16181,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399205,,,train,sda-all,samples/GSE120374/GSM3399205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.64}",disease_status,low_confidence_annotation
GSM3399206,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,253,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:1298,1298,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14949,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399206,,,train,sda-all,samples/GSE120374/GSM3399206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399207,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,316,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:1298,1298,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15971,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399207,,,train,sda-all,samples/GSE120374/GSM3399207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.54}",disease_status;life_stage,low_confidence_annotation
GSM3399208,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,211,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:1294,1294,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15258,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399208,,,train,sda-all,samples/GSE120374/GSM3399208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM3399209,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,221,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:1294,1294,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399209,,,train,sda-all,samples/GSE120374/GSM3399209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.76}",disease_status,low_confidence_annotation
GSM3399210,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,234,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:1294,1294,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15647,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399210,,,train,sda-all,samples/GSE120374/GSM3399210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM3399211,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,215,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:1294,1294,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14788,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399211,,,train,sda-all,samples/GSE120374/GSM3399211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.73}",disease_status,low_confidence_annotation
GSM3399212,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,237,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:1294,1294,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15393,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399212,,,train,sda-all,samples/GSE120374/GSM3399212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM3399213,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,269,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:1294,1294,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14854,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399213,,,train,sda-all,samples/GSE120374/GSM3399213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.66}",disease_status,low_confidence_annotation
GSM3399214,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,281,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1248,1248,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14902,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399214,,,train,sda-all,samples/GSE120374/GSM3399214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM3399215,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,195,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:1244,1244,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15430,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399215,,,train,sda-all,samples/GSE120374/GSM3399215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399216,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,273,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:1244,1244,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15845,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399216,,,train,sda-all,samples/GSE120374/GSM3399216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM3399217,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,243,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:1244,1244,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15712,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399217,,,train,sda-all,samples/GSE120374/GSM3399217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 0.76}",disease_status,low_confidence_annotation
GSM3399218,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,246,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:1244,1244,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15323,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399218,,,train,sda-all,samples/GSE120374/GSM3399218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM3399219,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,253,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p100,extracted field,female,GSE120374:1244,1244,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15834,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399219,,,train,sda-all,samples/GSE120374/GSM3399219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM3399220,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,308,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1250,1250,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16136,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399220,,,train,sda-all,samples/GSE120374/GSM3399220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399221,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,242,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1250,1250,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15948,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399221,,,train,sda-all,samples/GSE120374/GSM3399221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM3399222,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,252,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1250,1250,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16036,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399222,,,train,sda-all,samples/GSE120374/GSM3399222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399223,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,283,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p70,extracted field,male,GSE120374:1250,1250,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15357,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399223,,,train,sda-all,samples/GSE120374/GSM3399223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM3399224,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,240,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1250,1250,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13868,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399224,,,train,sda-all,samples/GSE120374/GSM3399224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM3399225,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,319,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1250,1250,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14545,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399225,,,train,sda-all,samples/GSE120374/GSM3399225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.8}",,
GSM3399226,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,334,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:1245,1245,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14146,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399226,,,train,sda-all,samples/GSE120374/GSM3399226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399227,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,238,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p100,extracted field,female,GSE120374:1245,1245,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13789,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399227,,,train,sda-all,samples/GSE120374/GSM3399227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.26}",disease_status;life_stage,low_confidence_annotation
GSM3399228,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,304,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1238,1238,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14662,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399228,,,train,sda-all,samples/GSE120374/GSM3399228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM3399229,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,340,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1238,1238,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14685,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399229,,,train,sda-all,samples/GSE120374/GSM3399229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399230,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,204,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1238,1238,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14855,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399230,,,train,sda-all,samples/GSE120374/GSM3399230,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399231,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,250,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p70,extracted field,male,GSE120374:1238,1238,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14120,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399231,,,train,sda-all,samples/GSE120374/GSM3399231,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM3399232,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,337,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,female,GSE120374:1265,1265,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15385,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399232,,,train,sda-all,samples/GSE120374/GSM3399232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM3399233,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,342,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,female,GSE120374:1265,1265,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14794,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399233,,,train,sda-all,samples/GSE120374/GSM3399233,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399234,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,290,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,female,GSE120374:1265,1265,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15355,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399234,,,train,sda-all,samples/GSE120374/GSM3399234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM3399235,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,275,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1080,1080,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15467,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399235,,,train,sda-all,samples/GSE120374/GSM3399235,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399236,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,325,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1080,1080,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15389,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399236,,,train,sda-all,samples/GSE120374/GSM3399236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM3399237,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,272,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1266,1266,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14572,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399237,,,train,sda-all,samples/GSE120374/GSM3399237,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.67}",,
GSM3399238,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,310,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1266,1266,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14416,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399238,,,train,sda-all,samples/GSE120374/GSM3399238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM3399239,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,359,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1266,1266,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14745,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399239,,,train,sda-all,samples/GSE120374/GSM3399239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399240,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,311,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1266,1266,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15051,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399240,,,train,sda-all,samples/GSE120374/GSM3399240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM3399241,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,304,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1266,1266,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14949,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399241,,,train,sda-all,samples/GSE120374/GSM3399241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM3399242,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,239,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1266,1266,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14660,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399242,,,train,sda-all,samples/GSE120374/GSM3399242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM3399243,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,312,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1266,1266,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14847,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399243,,,train,sda-all,samples/GSE120374/GSM3399243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM3399244,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,287,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1266,1266,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14636,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399244,,,train,sda-all,samples/GSE120374/GSM3399244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399245,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,351,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1266,1266,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14674,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399245,,,train,sda-all,samples/GSE120374/GSM3399245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM3399246,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,273,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1266,1266,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14568,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399246,,,train,sda-all,samples/GSE120374/GSM3399246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM3399247,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,276,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1351,1351,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14501,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399247,,,train,sda-all,samples/GSE120374/GSM3399247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.72}",,
GSM3399248,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,215,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1351,1351,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14343,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399248,,,train,sda-all,samples/GSE120374/GSM3399248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM3399249,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,301,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1351,1351,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14565,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399249,,,train,sda-all,samples/GSE120374/GSM3399249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399250,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,247,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1351,1351,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14324,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399250,,,train,sda-all,samples/GSE120374/GSM3399250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM3399251,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,260,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1351,1351,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14750,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399251,,,train,sda-all,samples/GSE120374/GSM3399251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.67}",,
GSM3399252,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,298,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1351,1351,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15084,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399252,,,train,sda-all,samples/GSE120374/GSM3399252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.81}",,
GSM3399253,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,287,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1351,1351,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14912,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399253,,,train,sda-all,samples/GSE120374/GSM3399253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM3399254,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,280,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1351,1351,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14308,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399254,,,train,sda-all,samples/GSE120374/GSM3399254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM3399255,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,312,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1351,1351,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14991,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399255,,,train,sda-all,samples/GSE120374/GSM3399255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM3399256,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,299,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:998,998,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14877,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399256,,,train,sda-all,samples/GSE120374/GSM3399256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399257,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,277,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:998,998,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14514,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399257,,,train,sda-all,samples/GSE120374/GSM3399257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM3399258,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,272,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:998,998,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13902,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399258,,,train,sda-all,samples/GSE120374/GSM3399258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM3399259,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,270,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:998,998,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14524,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399259,,,train,sda-all,samples/GSE120374/GSM3399259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM3399260,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,289,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:998,998,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14518,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399260,,,train,sda-all,samples/GSE120374/GSM3399260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM3399261,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,280,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:998,998,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14646,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399261,,,train,sda-all,samples/GSE120374/GSM3399261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399262,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,183,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:998,998,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14675,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399262,,,train,sda-all,samples/GSE120374/GSM3399262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM3399263,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,256,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:998,998,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14387,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399263,,,train,sda-all,samples/GSE120374/GSM3399263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM3399264,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,221,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:998,998,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14596,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399264,,,train,sda-all,samples/GSE120374/GSM3399264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM3399265,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,206,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:998,998,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14762,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399265,,,train,sda-all,samples/GSE120374/GSM3399265,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM3399266,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,381,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1083,1083,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14764,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399266,,,train,sda-all,samples/GSE120374/GSM3399266,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM3399267,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,244,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1083,1083,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14509,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399267,,,train,sda-all,samples/GSE120374/GSM3399267,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM3399268,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,331,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1083,1083,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14553,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399268,,,train,sda-all,samples/GSE120374/GSM3399268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM3399269,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,344,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1083,1083,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14644,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399269,,,train,sda-all,samples/GSE120374/GSM3399269,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM3399270,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,330,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1083,1083,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14594,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399270,,,train,sda-all,samples/GSE120374/GSM3399270,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM3399271,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,270,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1083,1083,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14526,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399271,,,train,sda-all,samples/GSE120374/GSM3399271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 0.45}",disease_status;life_stage,low_confidence_annotation
GSM3399272,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,396,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1083,1083,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14149,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399272,,,train,sda-all,samples/GSE120374/GSM3399272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM3399273,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,333,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1083,1083,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14521,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399273,,,train,sda-all,samples/GSE120374/GSM3399273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM3399274,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,326,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1083,1083,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14264,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399274,,,train,sda-all,samples/GSE120374/GSM3399274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM3399275,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,226,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1083,1083,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14426,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399275,,,train,sda-all,samples/GSE120374/GSM3399275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.32}",disease_status;life_stage,low_confidence_annotation
GSM3399276,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,259,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1473,1473,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13471,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399276,,,train,sda-all,samples/GSE120374/GSM3399276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM3399277,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,295,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1352,1352,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14245,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399277,,,train,sda-all,samples/GSE120374/GSM3399277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM3399278,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,211,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1352,1352,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14557,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399278,,,train,sda-all,samples/GSE120374/GSM3399278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM3399279,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,285,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p100,extracted field,male,GSE120374:1352,1352,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13998,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399279,,,train,sda-all,samples/GSE120374/GSM3399279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399280,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,326,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p100,extracted field,female,GSE120374:1305,1305,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,13971,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399280,,,train,sda-all,samples/GSE120374/GSM3399280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM3399281,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,306,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1542,1542,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16316,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399281,,,train,sda-all,samples/GSE120374/GSM3399281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM3399282,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,215,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1542,1542,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16014,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399282,,,train,sda-all,samples/GSE120374/GSM3399282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM3399283,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,285,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1542,1542,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16181,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399283,,,train,sda-all,samples/GSE120374/GSM3399283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM3399284,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,311,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:1542,1542,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15912,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399284,,,train,sda-all,samples/GSE120374/GSM3399284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399285,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,277,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1542,1542,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15752,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399285,,,train,sda-all,samples/GSE120374/GSM3399285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399286,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,303,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1542,1542,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15881,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399286,,,train,sda-all,samples/GSE120374/GSM3399286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM3399287,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,296,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:1310,1310,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16258,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399287,,,train,sda-all,samples/GSE120374/GSM3399287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM3399288,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,224,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:1310,1310,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16086,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399288,,,train,sda-all,samples/GSE120374/GSM3399288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399289,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,266,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:1310,1310,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16343,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399289,,,train,sda-all,samples/GSE120374/GSM3399289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399290,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,302,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:1310,1310,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16070,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399290,,,train,sda-all,samples/GSE120374/GSM3399290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM3399291,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,224,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:1310,1310,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15869,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399291,,,train,sda-all,samples/GSE120374/GSM3399291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM3399292,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,251,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:1310,1310,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15685,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399292,,,train,sda-all,samples/GSE120374/GSM3399292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM3399293,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,297,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:1310,1310,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16266,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399293,,,train,sda-all,samples/GSE120374/GSM3399293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM3399294,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,267,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:1310,1310,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16164,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399294,,,train,sda-all,samples/GSE120374/GSM3399294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM3399295,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,292,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:2967,2967,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15622,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399295,,,train,sda-all,samples/GSE120374/GSM3399295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399296,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,310,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:2967,2967,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15688,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399296,,,train,sda-all,samples/GSE120374/GSM3399296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM3399297,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,293,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:2967,2967,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15518,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399297,,,train,sda-all,samples/GSE120374/GSM3399297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM3399298,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,328,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:2967,2967,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15401,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399298,,,train,sda-all,samples/GSE120374/GSM3399298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM3399299,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,304,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:2967,2967,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15454,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399299,,,train,sda-all,samples/GSE120374/GSM3399299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM3399300,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,282,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,adult,p120,extracted field,male,GSE120374:2967,2967,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15298,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399300,,,train,sda-all,samples/GSE120374/GSM3399300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399301,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,289,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1486,1486,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15303,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399301,,,train,sda-all,samples/GSE120374/GSM3399301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.56}",disease_status;life_stage,low_confidence_annotation
GSM3399302,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,311,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1486,1486,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15148,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399302,,,train,sda-all,samples/GSE120374/GSM3399302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM3399303,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,309,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1486,1486,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15154,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399303,,,train,sda-all,samples/GSE120374/GSM3399303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM3399304,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,323,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1486,1486,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14981,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399304,,,train,sda-all,samples/GSE120374/GSM3399304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM3399305,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,271,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1486,1486,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15219,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399305,,,train,sda-all,samples/GSE120374/GSM3399305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM3399306,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,309,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p70,extracted field,male,GSE120374:1486,1486,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14491,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399306,,,train,sda-all,samples/GSE120374/GSM3399306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 0.67}",disease_status,low_confidence_annotation
GSM3399307,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,250,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3167,3167,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16149,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399307,,,train,sda-all,samples/GSE120374/GSM3399307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.76}",disease_status,low_confidence_annotation
GSM3399308,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,212,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3167,3167,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15784,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399308,,,train,sda-all,samples/GSE120374/GSM3399308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399309,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,275,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3167,3167,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16033,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399309,,,train,sda-all,samples/GSE120374/GSM3399309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM3399310,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,244,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3167,3167,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15563,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399310,,,train,sda-all,samples/GSE120374/GSM3399310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM3399311,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,282,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3167,3167,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15761,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399311,,,train,sda-all,samples/GSE120374/GSM3399311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.64}",disease_status,low_confidence_annotation
GSM3399312,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,289,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3167,3167,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15776,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399312,,,train,sda-all,samples/GSE120374/GSM3399312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM3399313,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,262,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1394,1394,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16397,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399313,,,train,sda-all,samples/GSE120374/GSM3399313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM3399314,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,238,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1394,1394,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15856,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399314,,,train,sda-all,samples/GSE120374/GSM3399314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM3399315,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,309,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1394,1394,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16480,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399315,,,train,sda-all,samples/GSE120374/GSM3399315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399316,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,306,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1394,1394,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15970,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399316,,,train,sda-all,samples/GSE120374/GSM3399316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM3399317,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,305,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1394,1394,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16411,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399317,,,train,sda-all,samples/GSE120374/GSM3399317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399318,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,352,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1394,1394,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16036,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399318,,,train,sda-all,samples/GSE120374/GSM3399318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM3399319,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,278,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1396,1396,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16898,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399319,,,train,sda-all,samples/GSE120374/GSM3399319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399320,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,328,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1396,1396,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16866,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399320,,,train,sda-all,samples/GSE120374/GSM3399320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399321,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,278,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1396,1396,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16706,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399321,,,train,sda-all,samples/GSE120374/GSM3399321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399322,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,335,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1396,1396,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16560,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399322,,,train,sda-all,samples/GSE120374/GSM3399322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399323,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,303,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,adult,p120,extracted field,female,GSE120374:1396,1396,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16368,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399323,,,train,sda-all,samples/GSE120374/GSM3399323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM3399324,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,367,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16475,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399324,,,train,sda-all,samples/GSE120374/GSM3399324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399325,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,341,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16491,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399325,,,train,sda-all,samples/GSE120374/GSM3399325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399326,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,336,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16299,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399326,,,train,sda-all,samples/GSE120374/GSM3399326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399327,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,353,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16180,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399327,,,train,sda-all,samples/GSE120374/GSM3399327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM3399328,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,259,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16123,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399328,,,train,sda-all,samples/GSE120374/GSM3399328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399329,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,251,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15612,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399329,,,train,sda-all,samples/GSE120374/GSM3399329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399330,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,375,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16569,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399330,,,train,sda-all,samples/GSE120374/GSM3399330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM3399331,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,340,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16348,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399331,,,train,sda-all,samples/GSE120374/GSM3399331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM3399332,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,346,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15648,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399332,,,train,sda-all,samples/GSE120374/GSM3399332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM3399333,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,375,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15759,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399333,,,train,sda-all,samples/GSE120374/GSM3399333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399334,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,270,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15166,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399334,,,train,sda-all,samples/GSE120374/GSM3399334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399335,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,285,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3163,3163,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15393,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399335,,,train,sda-all,samples/GSE120374/GSM3399335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM3399336,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,337,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3153,3153,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16359,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399336,,,train,sda-all,samples/GSE120374/GSM3399336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399337,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,296,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3153,3153,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15856,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399337,,,train,sda-all,samples/GSE120374/GSM3399337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399338,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,313,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3153,3153,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16396,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399338,,,train,sda-all,samples/GSE120374/GSM3399338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399339,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,348,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3153,3153,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15638,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399339,,,train,sda-all,samples/GSE120374/GSM3399339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM3399340,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,320,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3153,3153,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15949,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399340,,,train,sda-all,samples/GSE120374/GSM3399340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399341,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,293,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3153,3153,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15526,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399341,,,train,sda-all,samples/GSE120374/GSM3399341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM3399342,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,380,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3147,3147,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16815,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399342,,,train,sda-all,samples/GSE120374/GSM3399342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399343,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,327,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3147,3147,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16072,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399343,,,train,sda-all,samples/GSE120374/GSM3399343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399344,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,410,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3147,3147,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16454,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399344,,,train,sda-all,samples/GSE120374/GSM3399344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM3399345,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,370,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3147,3147,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16345,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399345,,,train,sda-all,samples/GSE120374/GSM3399345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM3399346,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,373,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3147,3147,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16578,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399346,,,train,sda-all,samples/GSE120374/GSM3399346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM3399347,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,426,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:3147,3147,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16376,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399347,,,train,sda-all,samples/GSE120374/GSM3399347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM3399348,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,264,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3162,3162,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16425,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399348,,,train,sda-all,samples/GSE120374/GSM3399348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM3399349,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,248,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3162,3162,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15859,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399349,,,train,sda-all,samples/GSE120374/GSM3399349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM3399350,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,317,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3162,3162,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16074,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399350,,,train,sda-all,samples/GSE120374/GSM3399350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399351,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,304,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3162,3162,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15830,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399351,,,train,sda-all,samples/GSE120374/GSM3399351,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM3399352,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,281,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3162,3162,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15964,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399352,,,train,sda-all,samples/GSE120374/GSM3399352,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM3399353,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,291,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,male,GSE120374:3162,3162,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15671,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399353,,,train,sda-all,samples/GSE120374/GSM3399353,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM3399354,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,315,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16475,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399354,,,train,sda-all,samples/GSE120374/GSM3399354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM3399355,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,274,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16537,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399355,,,train,sda-all,samples/GSE120374/GSM3399355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399356,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,323,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15799,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399356,,,train,sda-all,samples/GSE120374/GSM3399356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM3399357,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,291,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15172,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399357,,,train,sda-all,samples/GSE120374/GSM3399357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM3399358,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,316,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16112,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399358,,,train,sda-all,samples/GSE120374/GSM3399358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM3399359,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,302,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16605,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399359,,,train,sda-all,samples/GSE120374/GSM3399359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM3399360,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,257,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15908,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399360,,,train,sda-all,samples/GSE120374/GSM3399360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399361,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,289,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16128,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399361,,,train,sda-all,samples/GSE120374/GSM3399361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399362,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,325,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15888,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399362,,,train,sda-all,samples/GSE120374/GSM3399362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM3399363,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,271,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14728,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399363,,,train,sda-all,samples/GSE120374/GSM3399363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM3399364,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,324,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3159,3159,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17723,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399364,,,train,sda-all,samples/GSE120374/GSM3399364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM3399365,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,336,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,male,GSE120374:3172,3172,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16466,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399365,,,train,sda-all,samples/GSE120374/GSM3399365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM3399366,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,290,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,male,GSE120374:3172,3172,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16028,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399366,,,train,sda-all,samples/GSE120374/GSM3399366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399367,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,320,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,male,GSE120374:3172,3172,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15997,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399367,,,train,sda-all,samples/GSE120374/GSM3399367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM3399368,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,280,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,male,GSE120374:3172,3172,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15567,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399368,,,train,sda-all,samples/GSE120374/GSM3399368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM3399369,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,308,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,male,GSE120374:3172,3172,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16071,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399369,,,train,sda-all,samples/GSE120374/GSM3399369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM3399370,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,332,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,male,GSE120374:3172,3172,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16400,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399370,,,train,sda-all,samples/GSE120374/GSM3399370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM3399371,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,308,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,male,GSE120374:3172,3172,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16656,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399371,,,train,sda-all,samples/GSE120374/GSM3399371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.45}",disease_status;life_stage,low_confidence_annotation
GSM3399372,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,323,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,male,GSE120374:3172,3172,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16738,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399372,,,train,sda-all,samples/GSE120374/GSM3399372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM3399373,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,327,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,male,GSE120374:3172,3172,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16483,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399373,,,train,sda-all,samples/GSE120374/GSM3399373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399374,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,345,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3146,3146,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16840,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399374,,,train,sda-all,samples/GSE120374/GSM3399374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM3399375,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,328,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3146,3146,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16750,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399375,,,train,sda-all,samples/GSE120374/GSM3399375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399376,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,348,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3146,3146,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16363,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399376,,,train,sda-all,samples/GSE120374/GSM3399376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399377,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,324,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3146,3146,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16254,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399377,,,train,sda-all,samples/GSE120374/GSM3399377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM3399378,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,328,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3146,3146,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15232,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399378,,,train,sda-all,samples/GSE120374/GSM3399378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM3399379,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,331,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3146,3146,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15747,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399379,,,train,sda-all,samples/GSE120374/GSM3399379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM3399380,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,322,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3146,3146,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16509,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399380,,,train,sda-all,samples/GSE120374/GSM3399380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399381,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,283,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3150,3150,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15675,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399381,,,train,sda-all,samples/GSE120374/GSM3399381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM3399382,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,308,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3150,3150,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15608,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399382,,,train,sda-all,samples/GSE120374/GSM3399382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM3399383,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,305,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3150,3150,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16015,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399383,,,train,sda-all,samples/GSE120374/GSM3399383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399384,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,320,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3150,3150,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16632,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399384,,,train,sda-all,samples/GSE120374/GSM3399384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM3399385,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,262,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3150,3150,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15196,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399385,,,train,sda-all,samples/GSE120374/GSM3399385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM3399386,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,260,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3150,3150,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15155,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399386,,,train,sda-all,samples/GSE120374/GSM3399386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM3399387,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,303,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3150,3150,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15375,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399387,,,train,sda-all,samples/GSE120374/GSM3399387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM3399388,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,243,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3150,3150,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14488,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399388,,,train,sda-all,samples/GSE120374/GSM3399388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM3399389,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,303,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3150,3150,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15361,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399389,,,train,sda-all,samples/GSE120374/GSM3399389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM3399390,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,258,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p120,extracted field,female,GSE120374:3150,3150,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15830,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399390,,,train,sda-all,samples/GSE120374/GSM3399390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM3399391,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,250,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A12,A12,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14780,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399391,,,train,sda-all,samples/GSE120374/GSM3399391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM3399392,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,242,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A12,A12,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15047,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399392,,,train,sda-all,samples/GSE120374/GSM3399392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM3399393,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,393,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A16,A16,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16980,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399393,,,train,sda-all,samples/GSE120374/GSM3399393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM3399394,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,306,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A16,A16,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16710,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399394,,,train,sda-all,samples/GSE120374/GSM3399394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM3399395,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,380,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A16,A16,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16428,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399395,,,train,sda-all,samples/GSE120374/GSM3399395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM3399396,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,297,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A16,A16,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16680,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399396,,,train,sda-all,samples/GSE120374/GSM3399396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM3399397,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,268,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A16,A16,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15979,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399397,,,train,sda-all,samples/GSE120374/GSM3399397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM3399398,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,212,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A16,A16,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16822,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399398,,,train,sda-all,samples/GSE120374/GSM3399398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 0.79}",,
GSM3399399,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,340,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A16,A16,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15761,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399399,,,train,sda-all,samples/GSE120374/GSM3399399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM3399400,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,223,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A16,A16,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15581,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399400,,,train,sda-all,samples/GSE120374/GSM3399400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.78}",,
GSM3399401,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,246,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A16,A16,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15400,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399401,,,train,sda-all,samples/GSE120374/GSM3399401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM3399402,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,235,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A16,A16,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15670,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399402,,,train,sda-all,samples/GSE120374/GSM3399402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM3399403,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,306,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A12,A12,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16148,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399403,,,train,sda-all,samples/GSE120374/GSM3399403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM3399404,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,321,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A12,A12,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15742,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399404,,,train,sda-all,samples/GSE120374/GSM3399404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399405,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,305,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A12,A12,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16230,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399405,,,train,sda-all,samples/GSE120374/GSM3399405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM3399406,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,286,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A12,A12,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16286,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399406,,,train,sda-all,samples/GSE120374/GSM3399406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM3399407,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,304,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,juvenile,p100,extracted field,female,GSE120374:A12,A12,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16348,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399407,,,train,sda-all,samples/GSE120374/GSM3399407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.53}",disease_status;life_stage,low_confidence_annotation
GSM3399408,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,289,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,ATG7(fl/fl);ChatCre(+/-);SOD(+/-),age rule: postnatal day,adult,p100,extracted field,female,GSE120374:A12,A12,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16279,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399408,,,train,sda-all,samples/GSE120374/GSM3399408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.8}",disease_status,low_confidence_annotation
GSM3399409,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,248,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:S4,S4,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14996,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399409,,,train,sda-all,samples/GSE120374/GSM3399409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM3399410,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,191,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:S4,S4,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15007,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399410,,,train,sda-all,samples/GSE120374/GSM3399410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM3399411,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,272,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:S4,S4,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14748,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399411,,,train,sda-all,samples/GSE120374/GSM3399411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.58}",disease_status;life_stage,low_confidence_annotation
GSM3399412,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,235,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:S4,S4,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15177,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399412,,,train,sda-all,samples/GSE120374/GSM3399412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM3399413,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,210,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:S4,S4,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14638,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399413,,,train,sda-all,samples/GSE120374/GSM3399413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.5}",disease_status;life_stage,low_confidence_annotation
GSM3399414,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,265,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:S4,S4,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14766,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399414,,,train,sda-all,samples/GSE120374/GSM3399414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM3399415,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,249,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1059,1059,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15193,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399415,,,train,sda-all,samples/GSE120374/GSM3399415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399416,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,212,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:1059,1059,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15522,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399416,,,train,sda-all,samples/GSE120374/GSM3399416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM3399417,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,202,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1059,1059,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15195,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399417,,,train,sda-all,samples/GSE120374/GSM3399417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM3399418,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,159,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1059,1059,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15319,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399418,,,train,sda-all,samples/GSE120374/GSM3399418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.74}",,
GSM3399419,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,208,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,female,GSE120374:1059,1059,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14506,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399419,,,train,sda-all,samples/GSE120374/GSM3399419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.72}",,
GSM3399420,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,191,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:1059,1059,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15315,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399420,,,train,sda-all,samples/GSE120374/GSM3399420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM3399421,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,318,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,female,GSE120374:1453,1453,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15771,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399421,,,train,sda-all,samples/GSE120374/GSM3399421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM3399422,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,301,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p70,extracted field,female,GSE120374:1453,1453,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16088,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399422,,,train,sda-all,samples/GSE120374/GSM3399422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399423,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,205,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,female,GSE120374:1453,1453,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16139,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399423,,,train,sda-all,samples/GSE120374/GSM3399423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM3399424,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,194,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p70,extracted field,female,GSE120374:1453,1453,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15723,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399424,,,train,sda-all,samples/GSE120374/GSM3399424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM3399425,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,236,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p70,extracted field,female,GSE120374:1453,1453,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16161,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399425,,,train,sda-all,samples/GSE120374/GSM3399425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.72}",,
GSM3399426,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,234,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p70,extracted field,female,GSE120374:1453,1453,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16361,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399426,,,train,sda-all,samples/GSE120374/GSM3399426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM3399427,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,292,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:M0009,M0009,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14634,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399427,,,train,sda-all,samples/GSE120374/GSM3399427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM3399428,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,287,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:M0009,M0009,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16087,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399428,,,train,sda-all,samples/GSE120374/GSM3399428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM3399429,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,210,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:M0009,M0009,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14795,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399429,,,train,sda-all,samples/GSE120374/GSM3399429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399430,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,218,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:M0009,M0009,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16003,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399430,,,train,sda-all,samples/GSE120374/GSM3399430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM3399431,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,135,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:M0009,M0009,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15847,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399431,,,train,sda-all,samples/GSE120374/GSM3399431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.62}",,
GSM3399432,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,239,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:M0010,M0010,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,14606,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399432,,,train,sda-all,samples/GSE120374/GSM3399432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM3399433,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,252,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:M0010,M0010,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15109,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399433,,,train,sda-all,samples/GSE120374/GSM3399433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM3399434,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,151,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:M0010,M0010,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12886,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399434,,,train,sda-all,samples/GSE120374/GSM3399434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM3399435,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,236,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:M0010,M0010,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15315,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399435,,,train,sda-all,samples/GSE120374/GSM3399435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM3399436,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,142,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:M0010,M0010,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15932,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399436,,,train,sda-all,samples/GSE120374/GSM3399436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.6900000000000001}",,
GSM3399437,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,181,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:M0010,M0010,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16362,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399437,,,train,sda-all,samples/GSE120374/GSM3399437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM3399438,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,130,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:M0010,M0010,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15688,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399438,,,train,sda-all,samples/GSE120374/GSM3399438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM3399439,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,160,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0018155,luna,,B6SJLSOD1-G93A,age rule: postnatal day,juvenile,p30,extracted field,male,GSE120374:M0010,M0010,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16416,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399439,,,train,sda-all,samples/GSE120374/GSM3399439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM3399440,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,138,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0004976;MONDO:0024257,luna,,B6SJLSOD1-G93A,age rule: postnatal day,neonatal or infant,p30,extracted field,male,GSE120374:M0010,M0010,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15997,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399440,,,train,sda-all,samples/GSE120374/GSM3399440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM3399441,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,269,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:M0224,M0224,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15677,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399441,,,train,sda-all,samples/GSE120374/GSM3399441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM3399442,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,209,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:M0224,M0224,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15966,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399442,,,train,sda-all,samples/GSE120374/GSM3399442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM3399443,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,258,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:M0224,M0224,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16449,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399443,,,train,sda-all,samples/GSE120374/GSM3399443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM3399444,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,216,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:M0224,M0224,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16308,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399444,,,train,sda-all,samples/GSE120374/GSM3399444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM3399445,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,295,Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis,GSE120374,GSE120374,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,,luna,,B6SJLSOD1-WT,age rule: postnatal day,juvenile,p30,extracted field,female,GSE120374:M0224,M0224,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16576,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM3399445,,,train,sda-all,samples/GSE120374/GSM3399445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.62}",,
GSM4067523,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,adult,unknown,Other,HDST,True,H&E,113429,High-density spatial transcriptomics arrays for in situ tissue profiling,GSE130682,GSE130682,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,,age rule: age with unit,adult,12 weeks,not stated,,,,,,release v3,sequencing-based,High-density spatial transcriptomics arrays,,,,14198,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,31501547,,GSM4067523,,,train,hesrt,samples/GSE130682/GSM4067523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM4030472,heart,normal,,heart,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,902,Spatial Transcriptomics of Human Cardiac Tissue,GSE135805,GSE135805,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Cardiac biopsy (transplantation),,luna,,Normal control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,4029,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31862877,,GSM4030472,,,train,sda-all,samples/GSE135805/GSM4030472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM4030473,heart,disease,cardiomyopathy,heart,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,958,Spatial Transcriptomics of Human Cardiac Tissue,GSE135805,GSE135805,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Cardiac biopsy (explanted),MONDO:0004994,luna,ischemic cardiomyopathy,ischemic cardiomyopathy patient,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,10488,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31862877,,GSM4030473,,,train,sda-all,samples/GSE135805/GSM4030473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM4030474,heart,disease,dilated cardiomyopathy,heart,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,934,Spatial Transcriptomics of Human Cardiac Tissue,GSE135805,GSE135805,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Cardiac biopsy (explanted),MONDO:0005021,luna,dilated cardiomyopathy,dilated cardiomyopathy patient,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,4741,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31862877,,GSM4030474,,,train,sda-all,samples/GSE135805/GSM4030474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4030475,heart,disease,hypertrophic cardiomyopathy,heart,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,958,Spatial Transcriptomics of Human Cardiac Tissue,GSE135805,GSE135805,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Cardiac biopsy (explanted),MONDO:0005045,luna,hypertrophic cardiomyopathy,hypertrophic cardiomyopathy patient,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,12734,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,31862877,,GSM4030475,,,train,sda-all,samples/GSE135805/GSM4030475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4096261,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,2500,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic day 10,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,22969,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4096261,,,train,sda-all,samples/GSE137986/GSM4096261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4096262,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,936,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic day 10,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,22802,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4096262,,,train,sda-all,samples/GSE137986/GSM4096262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4189611,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,902,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic day 10,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,22243,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4189611,,,train,sda-all,samples/GSE137986/GSM4189611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4189612,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1667,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic day 12,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,22571,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4189612,,,train,sda-all,samples/GSE137986/GSM4189612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4189613,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,901,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic day 10,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,22846,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4189613,,,train,sda-all,samples/GSE137986/GSM4189613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4189614,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1789,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic day 10,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,18787,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4189614,,,train,sda-all,samples/GSE137986/GSM4189614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4189615,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,2500,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic day 10,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,20268,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4189615,,,train,sda-all,samples/GSE137986/GSM4189615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4364242,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1837,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic Day 11,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,20849,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4364242,,,train,sda-all,samples/GSE137986/GSM4364242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4364243,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1662,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic Day 11,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,21890,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4364243,,,train,sda-all,samples/GSE137986/GSM4364243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4364244,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1840,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic Day 11,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,21337,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4364244,,,train,sda-all,samples/GSE137986/GSM4364244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4364245,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,2109,High spatial resolution multi-omics atlas sequencing of mouse embryos,GSE137986,GSE137986,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,embryo,,luna,,,age rule: embryonic day,embryonic,Embryonic Day 11,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,20257,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,33188776,,GSM4364245,,,train,sda-all,samples/GSE137986/GSM4364245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4284316,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,666,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P2,P2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17138,counts,pixel,0.7614931074304077,platform_constant,0.7614931074304077,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284316,,,train,hesrt,samples/GSE144239/GSM4284316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM4284317,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,646,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P2,P2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17344,counts,pixel,0.7626040359088069,platform_constant,0.7626040359088069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284317,,,train,hesrt,samples/GSE144239/GSM4284317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284318,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,638,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P2,P2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17883,counts,pixel,0.7617104538561993,platform_constant,0.7617104538561993,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284318,,,train,hesrt,samples/GSE144239/GSM4284318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284319,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,590,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P5,P5,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16959,counts,pixel,0.7637965829214848,platform_constant,0.7637965829214848,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284319,,,train,hesrt,samples/GSE144239/GSM4284319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284320,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,521,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P5,P5,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17689,counts,pixel,0.7617486280738048,platform_constant,0.7617486280738048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284320,,,train,hesrt,samples/GSE144239/GSM4284320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM4284321,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,521,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P5,P5,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17399,counts,pixel,0.7617486280738048,platform_constant,0.7617486280738048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284321,,,train,hesrt,samples/GSE144239/GSM4284321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM4284322,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,1145,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P9,P9,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17823,counts,pixel,0.7605539208662603,platform_constant,0.7605539208662603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284322,,,train,hesrt,samples/GSE144239/GSM4284322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284323,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,1071,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P9,P9,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19314,counts,pixel,0.7609436740774449,platform_constant,0.7609436740774449,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284323,,,train,hesrt,samples/GSE144239/GSM4284323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM4284324,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,1182,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P9,P9,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17976,counts,pixel,0.7607692514864337,platform_constant,0.7607692514864337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284324,,,train,hesrt,samples/GSE144239/GSM4284324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM4284325,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,608,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P10,P10,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,15383,counts,pixel,0.7609618777824206,platform_constant,0.7609618777824206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284325,,,train,hesrt,samples/GSE144239/GSM4284325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284326,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,621,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P10,P10,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16642,counts,pixel,0.7618187520677493,platform_constant,0.7618187520677493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284326,,,train,hesrt,samples/GSE144239/GSM4284326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4284327,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,462,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239+GSE144240,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P10,P10,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17047,counts,pixel,0.7587550710493794,platform_constant,0.7587550710493794,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4284327,,,train,hesrt,samples/GSE144239/GSM4284327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM4565823,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,744,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P4,P4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.538375052218066,platform_constant,4.538375052218066,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4565823,,,train,hesrt,samples/GSE144239/GSM4565823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM4565824,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,696,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P4,P4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.538375052218043,platform_constant,4.538375052218043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4565824,,,train,hesrt,samples/GSE144239/GSM4565824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM4565825,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3650,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P6,P6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.538375052218043,platform_constant,4.538375052218043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4565825,,,train,hesrt,samples/GSE144239/GSM4565825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM4565826,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3838,Single Cell and Spatial Analysis of Human Squamous Cell Carcinoma [ST],GSE144239,GSE144239,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0005096,luna,cSCC,,luna,not stated,,not stated,,GSE144239:P6,P6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.5305838676876204,platform_constant,4.5305838676876204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32579974;38037084;41872488,,GSM4565826,,,train,hesrt,samples/GSE144239/GSM4565826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM4459917,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,152,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7177789283059562,platform_constant,0.7177789283059562,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459917,,,train,hesrt,samples/GSE147747/GSM4459917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459918,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,197,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7122831829594402,platform_constant,0.7122831829594402,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459918,,,train,hesrt,samples/GSE147747/GSM4459918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459919,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,240,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459919,,,train,hesrt,samples/GSE147747/GSM4459919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM4459920,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,218,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459920,,,train,hesrt,samples/GSE147747/GSM4459920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM4459921,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,269,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459921,,,train,hesrt,samples/GSE147747/GSM4459921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459922,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,274,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459922,,,train,hesrt,samples/GSE147747/GSM4459922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459923,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,287,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7413460601770779,platform_constant,0.7413460601770779,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459923,,,train,hesrt,samples/GSE147747/GSM4459923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM4459924,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,326,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7307746409185883,platform_constant,0.7307746409185883,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459924,,,train,hesrt,samples/GSE147747/GSM4459924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459925,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,361,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.728387649486892,platform_constant,0.728387649486892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459925,,,train,hesrt,samples/GSE147747/GSM4459925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459926,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,357,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7254604943244073,platform_constant,0.7254604943244073,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459926,,,train,hesrt,samples/GSE147747/GSM4459926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459927,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,393,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7365302821694607,platform_constant,0.7365302821694607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459927,,,train,hesrt,samples/GSE147747/GSM4459927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459928,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,403,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7274824952933211,platform_constant,0.7274824952933211,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459928,,,train,hesrt,samples/GSE147747/GSM4459928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM4459929,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,488,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7166282264688141,platform_constant,0.7166282264688141,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459929,,,train,hesrt,samples/GSE147747/GSM4459929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459930,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,461,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7151860116497669,platform_constant,0.7151860116497669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459930,,,train,hesrt,samples/GSE147747/GSM4459930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459931,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,381,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7141239624994147,platform_constant,0.7141239624994147,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459931,,,train,hesrt,samples/GSE147747/GSM4459931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459932,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,470,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7083294642576037,platform_constant,0.7083294642576037,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459932,,,train,hesrt,samples/GSE147747/GSM4459932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459933,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,491,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.712753312747814,platform_constant,0.712753312747814,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459933,,,train,hesrt,samples/GSE147747/GSM4459933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM4459934,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,512,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7086659226992144,platform_constant,0.7086659226992144,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459934,,,train,hesrt,samples/GSE147747/GSM4459934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459935,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,487,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7167187776628312,platform_constant,0.7167187776628312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459935,,,train,hesrt,samples/GSE147747/GSM4459935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM4459936,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,522,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7074491253228741,platform_constant,0.7074491253228741,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459936,,,train,hesrt,samples/GSE147747/GSM4459936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459937,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,494,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7148405310516956,platform_constant,0.7148405310516956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459937,,,train,hesrt,samples/GSE147747/GSM4459937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459938,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,506,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7309314915767978,platform_constant,0.7309314915767978,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459938,,,train,hesrt,samples/GSE147747/GSM4459938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459939,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,546,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7200298972224366,platform_constant,0.7200298972224366,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459939,,,train,hesrt,samples/GSE147747/GSM4459939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459940,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,433,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7359104255046374,platform_constant,0.7359104255046374,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459940,,,train,hesrt,samples/GSE147747/GSM4459940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459941,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,509,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7244921009874591,platform_constant,0.7244921009874591,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459941,,,train,hesrt,samples/GSE147747/GSM4459941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459942,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,580,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7304657090429815,platform_constant,0.7304657090429815,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459942,,,train,hesrt,samples/GSE147747/GSM4459942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459943,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,589,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7272397313972512,platform_constant,0.7272397313972512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459943,,,train,hesrt,samples/GSE147747/GSM4459943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459944,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,556,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.728929569188911,platform_constant,0.728929569188911,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459944,,,train,hesrt,samples/GSE147747/GSM4459944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459945,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,546,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7234021020435523,platform_constant,0.7234021020435523,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459945,,,train,hesrt,samples/GSE147747/GSM4459945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459946,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,560,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7239314281706696,platform_constant,0.7239314281706696,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459946,,,train,hesrt,samples/GSE147747/GSM4459946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459947,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,519,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7295451887874109,platform_constant,0.7295451887874109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459947,,,train,hesrt,samples/GSE147747/GSM4459947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459948,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,581,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7174837987292205,platform_constant,0.7174837987292205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459948,,,train,hesrt,samples/GSE147747/GSM4459948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459949,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,603,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7183725600582873,platform_constant,0.7183725600582873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459949,,,train,hesrt,samples/GSE147747/GSM4459949,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459950,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,577,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7153866401680602,platform_constant,0.7153866401680602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459950,,,train,hesrt,samples/GSE147747/GSM4459950,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459951,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,571,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7211143751262884,platform_constant,0.7211143751262884,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459951,,,train,hesrt,samples/GSE147747/GSM4459951,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459952,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,591,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7173530054592623,platform_constant,0.7173530054592623,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459952,,,train,hesrt,samples/GSE147747/GSM4459952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459953,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,604,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7163422245111931,platform_constant,0.7163422245111931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459953,,,train,hesrt,samples/GSE147747/GSM4459953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459954,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,556,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.716593622152593,platform_constant,0.716593622152593,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459954,,,train,hesrt,samples/GSE147747/GSM4459954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459955,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,536,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7176874183605242,platform_constant,0.7176874183605242,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459955,,,train,hesrt,samples/GSE147747/GSM4459955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459956,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,620,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7232097763809395,platform_constant,0.7232097763809395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459956,,,train,hesrt,samples/GSE147747/GSM4459956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459957,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,576,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7209430618858328,platform_constant,0.7209430618858328,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459957,,,train,hesrt,samples/GSE147747/GSM4459957,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM4459958,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,589,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7252100493093233,platform_constant,0.7252100493093233,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459958,,,train,hesrt,samples/GSE147747/GSM4459958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM4459959,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,604,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7266855964182916,platform_constant,0.7266855964182916,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459959,,,train,hesrt,samples/GSE147747/GSM4459959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459960,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,574,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7238347788233109,platform_constant,0.7238347788233109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459960,,,train,hesrt,samples/GSE147747/GSM4459960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459961,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,639,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7211266256657287,platform_constant,0.7211266256657287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459961,,,train,hesrt,samples/GSE147747/GSM4459961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459962,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,617,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7202309898305036,platform_constant,0.7202309898305036,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459962,,,train,hesrt,samples/GSE147747/GSM4459962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459963,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,606,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7246277512998457,platform_constant,0.7246277512998457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459963,,,train,hesrt,samples/GSE147747/GSM4459963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459964,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,508,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7132518469096335,platform_constant,0.7132518469096335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459964,,,train,hesrt,samples/GSE147747/GSM4459964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459965,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,549,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7164578289712764,platform_constant,0.7164578289712764,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459965,,,train,hesrt,samples/GSE147747/GSM4459965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM4459966,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,534,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7164862510699711,platform_constant,0.7164862510699711,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459966,,,train,hesrt,samples/GSE147747/GSM4459966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM4459967,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,508,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7450246502237837,platform_constant,0.7450246502237837,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459967,,,train,hesrt,samples/GSE147747/GSM4459967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459968,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,494,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7357630911684067,platform_constant,0.7357630911684067,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459968,,,train,hesrt,samples/GSE147747/GSM4459968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459969,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,460,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7452950271362069,platform_constant,0.7452950271362069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459969,,,train,hesrt,samples/GSE147747/GSM4459969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM4459970,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,469,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7407957435996176,platform_constant,0.7407957435996176,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459970,,,train,hesrt,samples/GSE147747/GSM4459970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459971,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,462,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7433651969715908,platform_constant,0.7433651969715908,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459971,,,train,hesrt,samples/GSE147747/GSM4459971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459972,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,450,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A1,A1,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7393782280924578,platform_constant,0.7393782280924578,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459972,,,train,hesrt,samples/GSE147747/GSM4459972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459973,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,527,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7215744810367211,platform_constant,0.7215744810367211,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459973,,,train,hesrt,samples/GSE147747/GSM4459973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459974,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,548,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7223915583463696,platform_constant,0.7223915583463696,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459974,,,train,hesrt,samples/GSE147747/GSM4459974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459975,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,524,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7166222034690247,platform_constant,0.7166222034690247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459975,,,train,hesrt,samples/GSE147747/GSM4459975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM4459976,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,484,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459976,,,train,hesrt,samples/GSE147747/GSM4459976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459977,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,490,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7445577407947976,platform_constant,0.7445577407947976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459977,,,train,hesrt,samples/GSE147747/GSM4459977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459978,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,478,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7459477191606944,platform_constant,0.7459477191606944,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459978,,,train,hesrt,samples/GSE147747/GSM4459978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459979,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,479,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7452030197544703,platform_constant,0.7452030197544703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459979,,,train,hesrt,samples/GSE147747/GSM4459979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459980,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,428,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7389892965286344,platform_constant,0.7389892965286344,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459980,,,train,hesrt,samples/GSE147747/GSM4459980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4459981,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,419,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A2,A2,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7313145279328939,platform_constant,0.7313145279328939,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459981,,,train,hesrt,samples/GSE147747/GSM4459981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM4459982,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,386,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A3,A3,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7376903728642603,platform_constant,0.7376903728642603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459982,,,train,hesrt,samples/GSE147747/GSM4459982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM4459983,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,406,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A3,A3,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.735467166338759,platform_constant,0.735467166338759,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459983,,,train,hesrt,samples/GSE147747/GSM4459983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459984,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,237,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A3,A3,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7388465155166551,platform_constant,0.7388465155166551,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459984,,,train,hesrt,samples/GSE147747/GSM4459984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM4459985,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,250,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A3,A3,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7377839476671044,platform_constant,0.7377839476671044,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459985,,,train,hesrt,samples/GSE147747/GSM4459985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459986,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,279,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A3,A3,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7307531064548638,platform_constant,0.7307531064548638,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459986,,,train,hesrt,samples/GSE147747/GSM4459986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM4459987,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,276,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A3,A3,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7266489955085792,platform_constant,0.7266489955085792,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459987,,,train,hesrt,samples/GSE147747/GSM4459987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM4459988,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,245,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A3,A3,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7314719615917352,platform_constant,0.7314719615917352,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459988,,,train,hesrt,samples/GSE147747/GSM4459988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM4459989,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,240,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A3,A3,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.729558806395335,platform_constant,0.729558806395335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459989,,,train,hesrt,samples/GSE147747/GSM4459989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM4459990,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,188,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A3,A3,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7303833780421948,platform_constant,0.7303833780421948,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459990,,,train,hesrt,samples/GSE147747/GSM4459990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4459991,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),True,H&E,214,Molecular Atlas of the Adult Mouse Brain,GSE147747,GSE147747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,age rule: age with unit,adult,9 weeks,extracted field,male,GSE147747:A3,A3,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23371,counts,pixel,0.7237648833052647,platform_constant,0.7237648833052647,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,32637622,,GSM4459991,,,train,hesrt,samples/GSE147747/GSM4459991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5026144,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2511,Neuroinflammatory astrocyte subtypes in the mouse brain,GSE148612,GSE148612,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,24h_Saline_i.p.,luna,juvenile,30–35 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.174543086023732,platform_constant,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026144,,,test,hesrt,samples/GSE148612/GSM5026144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5026145,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,3113,Neuroinflammatory astrocyte subtypes in the mouse brain,GSE148612,GSE148612,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,24h_Saline_i.p.,luna,juvenile,30–35 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.174543086023732,platform_constant,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026145,,,test,hesrt,samples/GSE148612/GSM5026145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5026146,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2728,Neuroinflammatory astrocyte subtypes in the mouse brain,GSE148612,GSE148612,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,24h_Saline_i.p.,luna,juvenile,30–35 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.173404329338715,platform_constant,4.173404329338715,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026146,,,test,hesrt,samples/GSE148612/GSM5026146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5026147,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2419,Neuroinflammatory astrocyte subtypes in the mouse brain,GSE148612,GSE148612,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,24h_LPS_i.p.,luna,juvenile,30–35 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.173404329338708,platform_constant,4.173404329338708,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026147,,,test,hesrt,samples/GSE148612/GSM5026147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5026148,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2157,Neuroinflammatory astrocyte subtypes in the mouse brain,GSE148612,GSE148612,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,24h_LPS_i.p.,luna,juvenile,30–35 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.173404329338708,platform_constant,4.173404329338708,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026148,,,test,hesrt,samples/GSE148612/GSM5026148,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5026149,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2730,Neuroinflammatory astrocyte subtypes in the mouse brain,GSE148612,GSE148612,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,24h_LPS_i.p.,luna,juvenile,30–35 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.173404329338708,platform_constant,4.173404329338708,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34413515,,GSM5026149,,,test,hesrt,samples/GSE148612/GSM5026149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4644079,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,grayscale bright-field (heuristic),3805,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,GSE153424,GSE153424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,,luna,,barcoded,age rule: postnatal day,neonatal or infant,P14,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,27999,counts,um,1.0,verified,3.8708851699241063,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35210624,,GSM4644079,,,train,sda-all,samples/GSE153424/GSM4644079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644080,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,grayscale bright-field (heuristic),4128,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,GSE153424,GSE153424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,,luna,,barcoded,age rule: postnatal day,neonatal or infant,P14,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,27999,counts,um,1.0,verified,3.9273645819217258,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35210624,,GSM4644080,,,train,sda-all,samples/GSE153424/GSM4644080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644081,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,grayscale bright-field (heuristic),4169,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,GSE153424,GSE153424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,,luna,,barcoded,age rule: postnatal day,neonatal or infant,P14,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,27999,counts,um,1.0,verified,3.9277393421166704,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35210624,,GSM4644081,,,train,sda-all,samples/GSE153424/GSM4644081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM4644082,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,grayscale bright-field (heuristic),3922,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,GSE153424,GSE153424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,,luna,,barcoded,age rule: postnatal day,neonatal or infant,P14,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,27999,counts,um,1.0,verified,3.912362885307886,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35210624,,GSM4644082,,,train,sda-all,samples/GSE153424/GSM4644082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644083,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,3736,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,GSE153424,GSE153424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,,luna,,barcoded,age rule: postnatal day,neonatal or infant,P14,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,27999,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,35210624,,GSM4644083,,,train,sda-all,samples/GSE153424/GSM4644083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644084,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,3563,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,GSE153424,GSE153424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,,luna,,barcoded,age rule: postnatal day,neonatal or infant,P14,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,27999,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,35210624,,GSM4644084,,,train,sda-all,samples/GSE153424/GSM4644084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644085,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,3610,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,GSE153424,GSE153424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,,luna,,barcoded,age rule: postnatal day,neonatal or infant,P14,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,27999,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,35210624,,GSM4644085,,,train,sda-all,samples/GSE153424/GSM4644085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4644086,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,3734,Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics,GSE153424,GSE153424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,,luna,,barcoded,age rule: postnatal day,neonatal or infant,P14,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,27999,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,35210624,,GSM4644086,,,train,sda-all,samples/GSE153424/GSM4644086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4656179,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2500,The spatial landscape of gene expression isoforms in tissue sections,GSE153859,GSE153859,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,hippocampus,,luna,,,age rule: age with unit,adult,2 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.716119783594065,platform_constant,4.716119783594065,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36928528,10.1101/2020.08.24.252296,SS-GSM4656179,same_section_within_series,GSM4656182,train,hesrt,samples/GSE153859/GSM4656179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9, ""life_stage"": 0.99}",,
GSM4656180,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2560,The spatial landscape of gene expression isoforms in tissue sections,GSE153859,GSE153859,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,hippocampus,,luna,,,age rule: age with unit,adult,2 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.716119783594065,platform_constant,4.716119783594065,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36928528,10.1101/2020.08.24.252296,SS-GSM4656180,same_section_within_series,GSM4656183,train,hesrt,samples/GSE153859/GSM4656180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM4656181,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,918,The spatial landscape of gene expression isoforms in tissue sections,GSE153859,GSE153859,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002264,olfactory bulb,,luna,,,age rule: age with unit,adult,2 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.360439716717719,platform_constant,4.360439716717719,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36928528,10.1101/2020.08.24.252296,SS-GSM4656181,same_section_within_series,GSM4656184,train,hesrt,samples/GSE153859/GSM4656181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM4663999,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1888,The orchestrated cellular and molecular responses of the kidney to endotoxin define a precise sepsis timeline.,GSE154107,GSE154107,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,sepsis,cecal ligation puncture,age rule: age with unit,adult,10 weeks,not stated,,GSE154107:129SV,129SV,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.279166708281583,platform_constant,4.279166708281583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33448928,,CG-25f97205805e,cross_gse_redeposit,GSM5224981,train,hesrt,samples/GSE154107/GSM4663999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6736780,embryo (whole),normal,,embryo,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,False,,1862,The Single-cell and spatial transcriptional landscape of human development,GSE155121,GSE155121,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000922,embryo,,luna,,,age rule: post-conception / gestational weeks,embryonic,PCW4,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37192616,,GSM6736780,,,train,sda-all,samples/GSE155121/GSM6736780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.4, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6736781,embryo (whole),normal,,embryo,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,False,,1877,The Single-cell and spatial transcriptional landscape of human development,GSE155121,GSE155121,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000922,embryo,,luna,,,age rule: post-conception / gestational weeks,embryonic,PCW4,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37192616,,GSM6736781,,,train,sda-all,samples/GSE155121/GSM6736781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM6736782,embryo (whole),normal,,embryo,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,False,,1709,The Single-cell and spatial transcriptional landscape of human development,GSE155121,GSE155121,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000922,embryo,,luna,,,age rule: post-conception / gestational weeks,embryonic,PCW4,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37192616,,GSM6736782,,,train,sda-all,samples/GSE155121/GSM6736782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6736783,embryo (whole),normal,,embryo,whole embryo/organism,Homo sapiens,human,embryonic,unknown,Visium,Visium,False,,1607,The Single-cell and spatial transcriptional landscape of human development,GSE155121,GSE155121,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000922,embryo,,luna,,,age rule: post-conception / gestational weeks,embryonic,PCW4,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37192616,,GSM6736783,,,train,sda-all,samples/GSE155121/GSM6736783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.43, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6736784,embryo (whole),normal,,embryo,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,False,,1989,The Single-cell and spatial transcriptional landscape of human development,GSE155121,GSE155121,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000922,embryo,,luna,,,age rule: post-conception / gestational weeks,embryonic,PCW4,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37192616,,GSM6736784,,,train,sda-all,samples/GSE155121/GSM6736784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6736785,embryo (whole),normal,,embryo,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,False,,1489,The Single-cell and spatial transcriptional landscape of human development,GSE155121,GSE155121,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000922,embryo,,luna,,,age rule: post-conception / gestational weeks,embryonic,PCW4,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37192616,,GSM6736785,,,train,sda-all,samples/GSE155121/GSM6736785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6736786,embryo (whole),normal,,embryo,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,False,,1890,The Single-cell and spatial transcriptional landscape of human development,GSE155121,GSE155121,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000922,embryo,,luna,,,age rule: post-conception / gestational weeks,embryonic,PCW4,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37192616,,GSM6736786,,,train,sda-all,samples/GSE155121/GSM6736786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6736787,embryo (whole),normal,,embryo,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,False,,1861,The Single-cell and spatial transcriptional landscape of human development,GSE155121,GSE155121,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000922,embryo,,luna,,,age rule: post-conception / gestational weeks,embryonic,PCW4,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37192616,,GSM6736787,,,train,sda-all,samples/GSE155121/GSM6736787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM4745615,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,2306,Spatial transcriptome of FFPE sample by DBiT-seq,GSE156862,GSE156862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Mouse embryo E10.5,,luna,,Untreated,luna,embryonic,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,DBiT-seq,,,spot,15633,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM4745615,,,train,sda-all,samples/GSE156862/GSM4745615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4745616,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,2130,Spatial transcriptome of FFPE sample by DBiT-seq,GSE156862,GSE156862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Mouse embryo E10.5,,luna,,Untreated,luna,embryonic,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,DBiT-seq,,,spot,15880,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM4745616,,,train,sda-all,samples/GSE156862/GSM4745616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4745617,blood vessel,normal,,aorta,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,533,Spatial transcriptome of FFPE sample by DBiT-seq,GSE156862,GSE156862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000947,Mouse aorta,,luna,,Untreated,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,DBiT-seq,,,spot,11520,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM4745617,,,train,sda-all,samples/GSE156862/GSM4745617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM4745618,heart,normal,,cardiac atrium,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2107,Spatial transcriptome of FFPE sample by DBiT-seq,GSE156862,GSE156862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002081,Mouse atrium,,luna,,Untreated,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,DBiT-seq,,,spot,14783,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM4745618,,,train,sda-all,samples/GSE156862/GSM4745618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4745619,heart,normal,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2039,Spatial transcriptome of FFPE sample by DBiT-seq,GSE156862,GSE156862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Mouse ventricle,,luna,,Untreated,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,DBiT-seq,,,spot,14858,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM4745619,,,train,sda-all,samples/GSE156862/GSM4745619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4797916,colon,normal,,colon,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,2649,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,GSE158328,GSE158328,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Adult colon,,luna,,,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.241860729725631,platform_constant,4.241860729725631,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797916,,,train,hesrt,samples/GSE158328/GSM4797916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM4797917,colon,normal,,colon,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,2316,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,GSE158328,GSE158328,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Adult colon,,luna,,,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.274319570684875,platform_constant,4.274319570684875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797917,,,train,hesrt,samples/GSE158328/GSM4797917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4797918,colon,normal,,colon,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1080,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,GSE158328,GSE158328,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Fetal Colon,,luna,,,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.274319570684875,platform_constant,4.274319570684875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797918,,,train,hesrt,samples/GSE158328/GSM4797918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4797919,colon,normal,,colon,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1242,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,GSE158328,GSE158328,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Fetal Colon,,luna,,,age rule: post-conception / gestational weeks,fetal,19 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.2936641899386,platform_constant,4.2936641899386,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797919,,,train,hesrt,samples/GSE158328/GSM4797919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM4797920,small intestine,normal,,small intestine,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,346,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,GSE158328,GSE158328,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Fetal Small Intestine,,luna,,,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.527272566101819,platform_constant,4.527272566101819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797920,,,train,hesrt,samples/GSE158328/GSM4797920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM4797921,small intestine,normal,,small intestine,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,344,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,GSE158328,GSE158328,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Fetal Small Intestine,,luna,,,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.431685125685778,platform_constant,4.431685125685778,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797921,,,train,hesrt,samples/GSE158328/GSM4797921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4797922,small intestine,normal,,small intestine,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,709,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,GSE158328,GSE158328,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Fetal Small Intestine,,luna,,,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.182771437896024,platform_constant,4.182771437896024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797922,,,train,hesrt,samples/GSE158328/GSM4797922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM4797923,small intestine,normal,,small intestine,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,644,Spatiotemporal Analysis of Human Intestinal Development at Single Cell Resolution - Spatial Transcriptomics,GSE158328,GSE158328,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Fetal Small Intestine,,luna,,,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.253086368094124,platform_constant,4.253086368094124,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33406409,,GSM4797923,,,train,hesrt,samples/GSE158328/GSM4797923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM4800808,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,3024,"Cell-type, single-cell, and spatial signatures of brain-region specific splicing in postnatal development",GSE158450,GSE158450,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,,age rule: postnatal day,neonatal or infant,8 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.865693479313843,platform_constant,4.865693479313843,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,33469025;35301264;35604081;36593406,,GSM4800808,,,train,hesrt,samples/GSE158450/GSM4800808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7770348,head and neck,perturbation,,olfactory epithelium,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1387,NFI transcription factors regulate zonal olfactory receptor expression,GSE158730,GSE158730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0001997,olfactory epithelium,,luna,,NfiAfl/fl; NfiBfl/fl; NfiXfl/fl; K5CreER*/+; Rosa-CAG-tdtomfl/fl (KO),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7352146220938077,platform_constant,0.7352146220938077,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36993168,,GSM7770348,,,train,hesrt,samples/GSE158730/GSM7770348,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7770349,head and neck,perturbation,,olfactory epithelium,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1535,NFI transcription factors regulate zonal olfactory receptor expression,GSE158730,GSE158730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001997,olfactory epithelium,,luna,,NfiAfl/fl; NfiBfl/fl; NfiXfl/fl; K5CreER*/+; Rosa-CAG-tdtomfl/fl (KO),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7406594656976235,platform_constant,0.7406594656976235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36993168,,GSM7770349,,,train,hesrt,samples/GSE158730/GSM7770349,sda-tissue-disease-2.3,"{""organ"": 0.32, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7770350,airway,perturbation,,olfactory epithelium,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1562,NFI transcription factors regulate zonal olfactory receptor expression,GSE158730,GSE158730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001997,olfactory epithelium,,luna,,K5CreER*/+; Rosa-CAG-tdtomfl/fl (WT),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7405579095048963,platform_constant,0.7405579095048963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36993168,,GSM7770350,,,train,hesrt,samples/GSE158730/GSM7770350,sda-tissue-disease-2.3,"{""organ"": 0.32, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7770351,head and neck,perturbation,,olfactory epithelium,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1714,NFI transcription factors regulate zonal olfactory receptor expression,GSE158730,GSE158730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001997,olfactory epithelium,,luna,,K5CreER*/+; Rosa-CAG-tdtomfl/fl (WT),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7405579095048963,platform_constant,0.7405579095048963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36993168,,GSM7770351,,,train,hesrt,samples/GSE158730/GSM7770351,sda-tissue-disease-2.3,"{""organ"": 0.44, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM4838131,skin,disease,melanoma,skin of body,tumour tissue,Danio rerio,zebrafish,not stated,unknown,Visium,Visium,False,,2425,Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface,GSE159709,GSE159709,7955,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,Danio rerio,luna,UBERON:0002097,,MONDO:0005105,luna,melanoma,BRAF-V600E,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32268,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34725363,,GSM4838131,,,train,sda-all,samples/GSE159709/GSM4838131,sda-tissue-disease-2.4,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM4838132,skin,disease,melanoma,skin of body,tumour tissue,Danio rerio,zebrafish,not stated,unknown,Visium,Visium,False,,2179,Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface,GSE159709,GSE159709,7955,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,Danio rerio,luna,UBERON:0002097,,MONDO:0005105,luna,melanoma,BRAF-V600E,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32268,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34725363,,GSM4838132,,,train,sda-all,samples/GSE159709/GSM4838132,sda-tissue-disease-2.4,"{""organ"": 0.45, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM4838133,skin,disease,melanoma,skin of body,tumour tissue,Danio rerio,zebrafish,not stated,unknown,Visium,Visium,False,,2677,Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface,GSE159709,GSE159709,7955,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,Danio rerio,luna,UBERON:0002097,,MONDO:0005105,luna,melanoma,BRAF-V600E,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32268,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34725363,,GSM4838133,,,train,sda-all,samples/GSE159709/GSM4838133,sda-tissue-disease-2.4,"{""organ"": 0.67, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.32, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM4861202,other,normal,,trunk,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,grayscale bright-field (heuristic),198,"Single cell- Cluster-RNA seq and Spatial Transcriptomics from the trunk of mouse embryos of different genotypes (wild type, Pax2-GFP, Pax2-GFP; Gata3 knockout) and developmental stages (E8.75, E9.5, E11.5) [Spatial Transcriptomics]",GSE160137,GSE160137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002100,trunk of Pax2GFP mouse embryo,,luna,,,age rule: embryonic day,embryonic,E9.5 (21 somite stage),not stated,,,,,,release v3,sequencing-based,Visium,,,spot,53574,counts,um,1.0,verified,4.257418911812625,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,33976190,,GSM4861202,,,train,sda-all,samples/GSE160137/GSM4861202,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 0.85, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM4861203,embryo (whole),normal,,trunk,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,grayscale bright-field (heuristic),222,"Single cell- Cluster-RNA seq and Spatial Transcriptomics from the trunk of mouse embryos of different genotypes (wild type, Pax2-GFP, Pax2-GFP; Gata3 knockout) and developmental stages (E8.75, E9.5, E11.5) [Spatial Transcriptomics]",GSE160137,GSE160137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002100,trunk of Pax2GFP mouse embryo,,luna,,,age rule: embryonic day,embryonic,E9.5 (21 somite stage),not stated,,,,,,release v3,sequencing-based,Visium,,,spot,53574,counts,um,1.0,verified,4.223255518423734,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,33976190,,GSM4861203,,,train,sda-all,samples/GSE160137/GSM4861203,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.84, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM4861204,other,perturbation,,trunk,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,grayscale bright-field (heuristic),192,"Single cell- Cluster-RNA seq and Spatial Transcriptomics from the trunk of mouse embryos of different genotypes (wild type, Pax2-GFP, Pax2-GFP; Gata3 knockout) and developmental stages (E8.75, E9.5, E11.5) [Spatial Transcriptomics]",GSE160137,GSE160137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002100,trunk of Pax2GFP mouse embryo,,luna,,,age rule: embryonic day,embryonic,E9.5 (21 somite stage),not stated,,,,,,release v3,sequencing-based,Visium,,,spot,53574,counts,um,1.0,verified,4.197644959050538,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,33976190,,GSM4861204,,,train,sda-all,samples/GSE160137/GSM4861204,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM4861205,other,normal,,trunk,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,grayscale bright-field (heuristic),178,"Single cell- Cluster-RNA seq and Spatial Transcriptomics from the trunk of mouse embryos of different genotypes (wild type, Pax2-GFP, Pax2-GFP; Gata3 knockout) and developmental stages (E8.75, E9.5, E11.5) [Spatial Transcriptomics]",GSE160137,GSE160137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002100,trunk of Pax2GFP mouse embryo,,luna,,,age rule: embryonic day,embryonic,E9.5 (21 somite stage),not stated,,,,,,release v3,sequencing-based,Visium,,,spot,53574,counts,um,1.0,verified,4.203652737212028,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,33976190,,GSM4861205,,,train,sda-all,samples/GSE160137/GSM4861205,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM4904759,skeletal muscle,perturbation,,tibialis anterior,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,982,Spatial RNA sequencing of regenerating mouse hindlimb muscle,GSE161318,GSE161318,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001385,tibialis anterior muscle,,luna,,Notexin injury (Day 2),age rule: age with unit,adult,5 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33217,counts,pixel,0.36055493700865504,platform_constant,0.5000127414192713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34773081,,GSM4904759,,,train,hesrt,samples/GSE161318/GSM4904759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4904760,skeletal muscle,perturbation,,tibialis anterior,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1011,Spatial RNA sequencing of regenerating mouse hindlimb muscle,GSE161318,GSE161318,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001385,tibialis anterior muscle,,luna,,Notexin injury (Day 5),age rule: age with unit,adult,5 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33217,counts,pixel,0.359757798335236,platform_constant,0.5000000741866777,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34773081,,GSM4904760,,,train,hesrt,samples/GSE161318/GSM4904760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4904761,skeletal muscle,perturbation,,tibialis anterior,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,995,Spatial RNA sequencing of regenerating mouse hindlimb muscle,GSE161318,GSE161318,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001385,tibialis anterior muscle,,luna,,Notexin injury (Day 7),age rule: age with unit,adult,5 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33217,counts,pixel,0.36010499904808674,platform_constant,0.5000132436451113,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34773081,,GSM4904761,,,train,hesrt,samples/GSE161318/GSM4904761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9301054,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,26564,Pancreatic Cancer Datasets,GSE161369,GSE161369,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301054,,,test,sda-all,samples/GSE161369/GSM9301054,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9301055,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,74003,Pancreatic Cancer Datasets,GSE161369,GSE161369,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000171971017151,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301055,,,test,sda-all,samples/GSE161369/GSM9301055,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9301056,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,60870,Pancreatic Cancer Datasets,GSE161369,GSE161369,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000111344404148,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301056,,,test,sda-all,samples/GSE161369/GSM9301056,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9301057,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,37661,Pancreatic Cancer Datasets,GSE161369,GSE161369,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000126169939438,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301057,,,test,sda-all,samples/GSE161369/GSM9301057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9301058,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,67726,Pancreatic Cancer Datasets,GSE161369,GSE161369,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301058,,,test,sda-all,samples/GSE161369/GSM9301058,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9301059,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,91962,Pancreatic Cancer Datasets,GSE161369,GSE161369,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999889514970721,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301059,,,test,sda-all,samples/GSE161369/GSM9301059,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9301060,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,17474,Pancreatic Cancer Datasets,GSE161369,GSE161369,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_89g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49997417888865936,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301060,,,test,sda-all,samples/GSE161369/GSM9301060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9301061,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,66433,Pancreatic Cancer Datasets,GSE161369,GSE161369,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999934200631673,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42649389,,GSM9301061,,,test,sda-all,samples/GSE161369/GSM9301061,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM4983123,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,693,Nrf1 promotes heart regeneration and repair by regulating proteostasis and redox balance,GSE163631,GSE163631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart transverse section,MONDO:0005068,luna,,Myocardial infarction,luna,neonatal or infant,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,15300,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34489413,,GSM4983123,,,train,sda-all,samples/GSE163631/GSM4983123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5268644,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,544,Nrf1 promotes heart regeneration and repair by regulating proteostasis and redox balance,GSE163631,GSE163631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart transverse section,,luna,,Sham control,luna,neonatal or infant,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34489413,,GSM5268644,,,train,sda-all,samples/GSE163631/GSM5268644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5268645,heart,normal,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,960,Nrf1 promotes heart regeneration and repair by regulating proteostasis and redox balance,GSE163631,GSE163631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart transverse section,,luna,,Sham control,luna,neonatal or infant,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,14655,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34489413,,GSM5268645,,,train,sda-all,samples/GSE163631/GSM5268645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM5268646,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,376,Nrf1 promotes heart regeneration and repair by regulating proteostasis and redox balance,GSE163631,GSE163631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart transverse section,MONDO:0005068,luna,,Myocardial infarction,luna,neonatal or infant,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,14466,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34489413,,GSM5268646,,,train,sda-all,samples/GSE163631/GSM5268646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5268647,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,791,Nrf1 promotes heart regeneration and repair by regulating proteostasis and redox balance,GSE163631,GSE163631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart transverse section,MONDO:0005068,luna,,Myocardial infarction,luna,neonatal or infant,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,14519,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34489413,,GSM5268647,,,train,sda-all,samples/GSE163631/GSM5268647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5026931,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,675,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,18482,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026931,,,train,sda-all,samples/GSE165141/GSM5026931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5026932,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,684,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17530,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026932,,,train,sda-all,samples/GSE165141/GSM5026932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5026933,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,650,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,18719,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026933,,,train,sda-all,samples/GSE165141/GSM5026933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5026934,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,1288,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19468,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026934,,,train,sda-all,samples/GSE165141/GSM5026934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM5026935,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,487,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19871,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026935,,,train,sda-all,samples/GSE165141/GSM5026935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5026936,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,1389,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17765,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026936,,,train,sda-all,samples/GSE165141/GSM5026936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5026937,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,487,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19882,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026937,,,train,sda-all,samples/GSE165141/GSM5026937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM5026938,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,648,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,16366,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026938,,,train,sda-all,samples/GSE165141/GSM5026938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5026939,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,626,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17499,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026939,,,train,sda-all,samples/GSE165141/GSM5026939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5026940,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,663,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17808,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026940,,,train,sda-all,samples/GSE165141/GSM5026940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5026941,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,629,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,17504,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026941,,,train,sda-all,samples/GSE165141/GSM5026941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5026942,liver,normal,,lobe of liver,primary tissue,Mus musculus,house mouse,not stated,female,ST (legacy),ST (legacy),False,,590,Spatial Transcriptomics to define transcriptional patterns of zonation and structural components in the liver,GSE165141,GSE165141,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001113,liver tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,18241,counts,um,1.0,verified,,,,,,,VERIFIED,,,,34857782,,GSM5026942,,,train,sda-all,samples/GSE165141/GSM5026942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5089667,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,505,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],GSE166948,GSE166948+GSE166950,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,WT unwounded,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2220118081699685,platform_constant,4.2220118081699685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089667,,,val,hesrt,samples/GSE166948/GSM5089667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5089668,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,478,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],GSE166948,GSE166948+GSE166950,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,WT wounded day 3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.247916566840627,platform_constant,4.247916566840627,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089668,,,val,hesrt,samples/GSE166948/GSM5089668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.66, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5089669,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,620,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],GSE166948,GSE166948+GSE166950,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,WT wounded day 3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.222011808169958,platform_constant,4.222011808169958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089669,,,val,hesrt,samples/GSE166948/GSM5089669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.51, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM5089670,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,792,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],GSE166948,GSE166948+GSE166950,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,GFP-KI wounded day 3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.237499866942504,platform_constant,4.237499866942504,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089670,,,val,hesrt,samples/GSE166948/GSM5089670,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM5089671,skin,disease,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,881,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],GSE166948,GSE166948+GSE166950,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,GFP-KI wounded day 3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.222011808169966,platform_constant,4.222011808169966,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089671,,,val,hesrt,samples/GSE166948/GSM5089671,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.67, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5089672,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,633,Interleukin-17 governs hypoxic adaptation of injured epithelium [spatial transcriptomics],GSE166948,GSE166948+GSE166950,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,GFP-KI wounded day 3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.222011808169958,platform_constant,4.222011808169958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35709248,,GSM5089672,,,val,hesrt,samples/GSE166948/GSM5089672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM5173925,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,30827,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21354,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173925,,,train,sda-all,samples/GSE169012/GSM5173925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173926,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,35355,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21645,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173926,,,train,sda-all,samples/GSE169012/GSM5173926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173927,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,40365,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22068,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173927,,,train,sda-all,samples/GSE169012/GSM5173927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173928,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,43840,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22019,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173928,,,train,sda-all,samples/GSE169012/GSM5173928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173929,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,55086,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22170,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173929,,,train,sda-all,samples/GSE169012/GSM5173929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173930,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,52364,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21997,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173930,,,train,sda-all,samples/GSE169012/GSM5173930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173931,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,49682,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21651,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173931,,,train,sda-all,samples/GSE169012/GSM5173931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173932,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,47024,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21646,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173932,,,train,sda-all,samples/GSE169012/GSM5173932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5173933,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,56016,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21957,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173933,,,train,sda-all,samples/GSE169012/GSM5173933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173934,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,47249,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22167,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173934,,,train,sda-all,samples/GSE169012/GSM5173934,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173935,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,53359,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22428,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173935,,,train,sda-all,samples/GSE169012/GSM5173935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173936,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,49049,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22003,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173936,,,train,sda-all,samples/GSE169012/GSM5173936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173937,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,47076,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22771,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173937,,,train,sda-all,samples/GSE169012/GSM5173937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173938,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,45479,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22199,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173938,,,train,sda-all,samples/GSE169012/GSM5173938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173939,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,46893,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21826,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173939,,,train,sda-all,samples/GSE169012/GSM5173939,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5173940,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,49717,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21815,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173940,,,train,sda-all,samples/GSE169012/GSM5173940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173941,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,43088,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21809,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173941,,,train,sda-all,samples/GSE169012/GSM5173941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5173942,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,50225,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21641,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173942,,,train,sda-all,samples/GSE169012/GSM5173942,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5173943,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,52795,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21602,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173943,,,train,sda-all,samples/GSE169012/GSM5173943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173944,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,51450,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21434,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173944,,,train,sda-all,samples/GSE169012/GSM5173944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173945,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,30041,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,20479,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173945,,,train,sda-all,samples/GSE169012/GSM5173945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173946,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,34997,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,20701,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173946,,,train,sda-all,samples/GSE169012/GSM5173946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5173947,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,41337,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21506,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173947,,,train,sda-all,samples/GSE169012/GSM5173947,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5173948,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,46648,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21487,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173948,,,train,sda-all,samples/GSE169012/GSM5173948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173949,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,42455,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21533,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173949,,,train,sda-all,samples/GSE169012/GSM5173949,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173950,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,50483,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21787,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173950,,,train,sda-all,samples/GSE169012/GSM5173950,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173951,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,49562,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21767,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173951,,,train,sda-all,samples/GSE169012/GSM5173951,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5173952,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,45535,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21398,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173952,,,train,sda-all,samples/GSE169012/GSM5173952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5173953,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,39903,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21738,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173953,,,train,sda-all,samples/GSE169012/GSM5173953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5173954,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,37956,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21660,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173954,,,train,sda-all,samples/GSE169012/GSM5173954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173955,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,41202,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21653,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173955,,,train,sda-all,samples/GSE169012/GSM5173955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173956,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,44306,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21673,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173956,,,train,sda-all,samples/GSE169012/GSM5173956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173957,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,38022,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21766,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173957,,,train,sda-all,samples/GSE169012/GSM5173957,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173958,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,49988,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21931,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173958,,,train,sda-all,samples/GSE169012/GSM5173958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5173959,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,49694,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22051,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173959,,,train,sda-all,samples/GSE169012/GSM5173959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173960,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,51734,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22004,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173960,,,train,sda-all,samples/GSE169012/GSM5173960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5173961,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,50418,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,21902,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173961,,,train,sda-all,samples/GSE169012/GSM5173961,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5173962,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,49625,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22038,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173962,,,train,sda-all,samples/GSE169012/GSM5173962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173963,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,52260,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,22165,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173963,,,train,sda-all,samples/GSE169012/GSM5173963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5173964,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Slide-seq,Slide-seq,False,,35047,Spatial transcriptome analysis (Slide-seq2) of mouse main olfactory bulb,GSE169012,GSE169012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0009951,Main olfactory bulb,,luna,,wild type,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Slide-seq,,,bead,19207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35314823;40768336,,GSM5173964,,,train,sda-all,samples/GSE169012/GSM5173964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5213483,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2604,10X Visium Spatial transcriptomics of murine colon in steady state and during recovery after DSS colitis,GSE169749,GSE169749,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35149721,,GSM5213483,,,train,hesrt,samples/GSE169749/GSM5213483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5213484,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3630,10X Visium Spatial transcriptomics of murine colon in steady state and during recovery after DSS colitis,GSE169749,GSE169749,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0005292,luna,,DSS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35149721,,GSM5213484,,,train,hesrt,samples/GSE169749/GSM5213484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5224027,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,768,"A new epithelial cell subpopulation predicts response to surgery, chemotherapy, and immunotherapy in bladder cancer",GSE171351,GSE171351,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder,MONDO:0004992,luna,bladder cancer,muscle-invasive bladder cancer (MIBC),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.4878048780487805,platform_constant,0.5000078590627138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34385456;37344596,,GSM5224027,,,val,hesrt,samples/GSE171351/GSM5224027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5224028,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1017,"A new epithelial cell subpopulation predicts response to surgery, chemotherapy, and immunotherapy in bladder cancer",GSE171351,GSE171351,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder,MONDO:0004992,luna,bladder cancer,muscle-invasive bladder cancer (MIBC),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.4878048780487805,platform_constant,0.5000078590627138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34385456;37344596,,GSM5224028,,,val,hesrt,samples/GSE171351/GSM5224028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5224029,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1469,"A new epithelial cell subpopulation predicts response to surgery, chemotherapy, and immunotherapy in bladder cancer",GSE171351,GSE171351,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder,MONDO:0004992,luna,bladder cancer,muscle-invasive bladder cancer (MIBC),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.4878048780487805,platform_constant,0.5000078590627138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34385456;37344596,,GSM5224029,,,val,hesrt,samples/GSE171351/GSM5224029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5224030,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,832,"A new epithelial cell subpopulation predicts response to surgery, chemotherapy, and immunotherapy in bladder cancer",GSE171351,GSE171351,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder,MONDO:0004992,luna,bladder cancer,muscle-invasive bladder cancer (MIBC),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.4878048780487805,platform_constant,0.5000065522116626,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34385456;37344596,,GSM5224030,,,val,hesrt,samples/GSE171351/GSM5224030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5224978,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,3007,Integration of spatial and single cell transcriptomics localizes epithelial-immune cross-talk in kidney injury,GSE171406,GSE171406,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney,,luna,Reference,Reference,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34003797,,CG-96e459c3bbd8,cross_gse_redeposit,GSM6047774,train,hesrt,samples/GSE171406/GSM5224978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5224979,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1835,Integration of spatial and single cell transcriptomics localizes epithelial-immune cross-talk in kidney injury,GSE171406,GSE171406,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney,,luna,Reference,Reference,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34003797,,GSM5224979,,,train,hesrt,samples/GSE171406/GSM5224979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5224980,kidney,disease,ischemia reperfusion injury,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2064,Integration of spatial and single cell transcriptomics localizes epithelial-immune cross-talk in kidney injury,GSE171406,GSE171406,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney,MONDO:0005203,luna,Ischemia Reperfuion Injury,Ischemia Reperfuion Injury,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34003797,,GSM5224980,,,train,hesrt,samples/GSE171406/GSM5224980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5255579,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1591,Cell type inference in human lung tissue by domain adaptation of single-cell and spatial transcriptomic data,GSE172416,GSE172416,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,GSE172416:No.1,No.1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.937069137291552,platform_constant,3.937069137291552,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35191503,,GSM5255579,,,val,hesrt,samples/GSE172416/GSM5255579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5255580,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2683,Cell type inference in human lung tissue by domain adaptation of single-cell and spatial transcriptomic data,GSE172416,GSE172416,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,GSE172416:No.1,No.1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0054589902768925,platform_constant,4.0054589902768925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35191503,,GSM5255580,,,val,hesrt,samples/GSE172416/GSM5255580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5273010,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2260,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,GSE173651,GSE173651,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.19310355561932,platform_constant,4.19310355561932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273010,,,train,hesrt,samples/GSE173651/GSM5273010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5273011,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2692,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,GSE173651,GSE173651,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.19310355561932,platform_constant,4.19310355561932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273011,,,train,hesrt,samples/GSE173651/GSM5273011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.45, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM5273012,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1869,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,GSE173651,GSE173651,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.19310355561932,platform_constant,4.19310355561932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273012,,,train,hesrt,samples/GSE173651/GSM5273012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.37, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM5273013,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3354,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,GSE173651,GSE173651,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.19310355561932,platform_constant,4.19310355561932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273013,,,train,hesrt,samples/GSE173651/GSM5273013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.51, ""life_stage"": 0.87}",uberon,low_confidence_annotation
GSM5273014,skin,normal,,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2333,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,GSE173651,GSE173651,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.148850610143831,platform_constant,4.148850610143831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273014,,,train,hesrt,samples/GSE173651/GSM5273014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.37, ""life_stage"": 0.89}",uberon,low_confidence_annotation
GSM5273015,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2516,Single-cell and spatial transcriptomic analysis of homeostatic adult human skin,GSE173651,GSE173651,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.148850610143841,platform_constant,4.148850610143841,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41872488,,GSM5273015,,,train,hesrt,samples/GSE173651/GSM5273015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.36, ""life_stage"": 0.84}",uberon,low_confidence_annotation
GSM6443458,brain,disease,,forebrain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2616,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,GSE174265,GSE174265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,brain,,luna,,CK-p25,luna,not stated,,not stated,,GSE174265:7746,7746,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36170369,,GSM6443458,,,train,sda-all,samples/GSE174265/GSM6443458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.71, ""life_stage"": 0.87}",,
GSM6443459,brain,disease,,forebrain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2303,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,GSE174265,GSE174265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,brain,,luna,,CK-p25,luna,not stated,,not stated,,GSE174265:7747,7747,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36170369,,GSM6443459,,,train,sda-all,samples/GSE174265/GSM6443459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.6900000000000001, ""life_stage"": 0.97}",,
GSM6443460,brain,disease,,forebrain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2438,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,GSE174265,GSE174265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,brain,,luna,,CK-p25,luna,not stated,,not stated,,GSE174265:8253,8253,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36170369,,GSM6443460,,,train,sda-all,samples/GSE174265/GSM6443460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.6000000000000001, ""life_stage"": 0.91}",,
GSM6443461,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2490,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,GSE174265,GSE174265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,CK-p25,luna,not stated,,not stated,,GSE174265:8255,8255,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36170369,,GSM6443461,,,train,sda-all,samples/GSE174265/GSM6443461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.45, ""life_stage"": 0.93}",uberon,low_confidence_annotation
GSM6443462,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,2624,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,GSE174265,GSE174265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,brain,,luna,,CK,luna,neonatal or infant,,not stated,,GSE174265:7748,7748,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36170369,,GSM6443462,,,train,sda-all,samples/GSE174265/GSM6443462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.73, ""life_stage"": 0.54}",disease_status;life_stage,low_confidence_annotation
GSM6443463,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2550,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,GSE174265,GSE174265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,brain,,luna,,CK,luna,not stated,,not stated,,GSE174265:7749,7749,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36170369,,GSM6443463,,,train,sda-all,samples/GSE174265/GSM6443463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.8300000000000001, ""life_stage"": 0.41000000000000003}",disease_status;life_stage,low_confidence_annotation
GSM6443464,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,2559,Neurons burdened by DNA double strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration.,GSE174265,GSE174265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,brain,,luna,,CK,luna,neonatal or infant,,not stated,,GSE174265:8254,8254,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36170369,,GSM6443464,,,train,sda-all,samples/GSE174265/GSM6443464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.09, ""uberon"": 0.75, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM5291683,head and neck,perturbation,,sagittal suture,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,423,Spatial transcriptomics reveals a role for sensory nerves in preserving cranial suture patency through modulation of BMP/TGFβ signaling,GSE174313,GSE174313,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0002492,Sagittal suture,,luna,,TrkAF592A mutant and control,age rule: postnatal day,neonatal or infant,0 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.081395419037193,platform_constant,4.081395419037193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34663698,,GSM5291683,,,train,hesrt,samples/GSE174313/GSM5291683,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5291684,head and neck,perturbation,,sagittal suture,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,363,Spatial transcriptomics reveals a role for sensory nerves in preserving cranial suture patency through modulation of BMP/TGFβ signaling,GSE174313,GSE174313,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0002492,Sagittal suture,,luna,,TrkAF592A mutant and control,age rule: postnatal day,neonatal or infant,0 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.988372223044195,platform_constant,3.988372223044195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34663698,,GSM5291684,,,train,hesrt,samples/GSE174313/GSM5291684,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5291685,head and neck,perturbation,,sagittal suture,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,560,Spatial transcriptomics reveals a role for sensory nerves in preserving cranial suture patency through modulation of BMP/TGFβ signaling,GSE174313,GSE174313,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0002492,Sagittal suture,,luna,,TrkAF592A mutant and control,age rule: postnatal day,neonatal or infant,0 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.0494186877654785,platform_constant,4.0494186877654785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34663698,,GSM5291685,,,train,hesrt,samples/GSE174313/GSM5291685,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5291686,head and neck,perturbation,,sagittal suture,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,324,Spatial transcriptomics reveals a role for sensory nerves in preserving cranial suture patency through modulation of BMP/TGFβ signaling,GSE174313,GSE174313,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0002492,Sagittal suture,,luna,,TrkAF592A mutant and control,age rule: postnatal day,neonatal or infant,0 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.9819766435216786,platform_constant,3.9819766435216786,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34663698,,GSM5291686,,,train,hesrt,samples/GSE174313/GSM5291686,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5291792,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2420,Spatiotemporal heterogeneity of inflammatory changes in Alzheimer's disease analyzed spatially resolved transcriptome,GSE174321,GSE174321,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,wild type,age rule: age with unit,adult,3 months,extracted field,male,GSE174321:Littermate,Littermate,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,15.358585748004048,platform_constant,15.358585748004048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38036733,,GSM5291792,,,train,hesrt,samples/GSE174321/GSM5291792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5291793,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2987,Spatiotemporal heterogeneity of inflammatory changes in Alzheimer's disease analyzed spatially resolved transcriptome,GSE174321,GSE174321,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,transgenic,age rule: age with unit,adult,3 months,extracted field,male,GSE174321:5XFAD (Tg6799),5XFAD (Tg6799),,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,15.358585748004048,platform_constant,15.358585748004048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38036733,,GSM5291793,,,train,hesrt,samples/GSE174321/GSM5291793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5291794,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3482,Spatiotemporal heterogeneity of inflammatory changes in Alzheimer's disease analyzed spatially resolved transcriptome,GSE174321,GSE174321,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,wild type,age rule: age with unit,adult,7 months,extracted field,male,GSE174321:Littermate,Littermate,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,17.065656336123478,platform_constant,17.065656336123478,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38036733,,GSM5291794,,,train,hesrt,samples/GSE174321/GSM5291794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5291795,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3358,Spatiotemporal heterogeneity of inflammatory changes in Alzheimer's disease analyzed spatially resolved transcriptome,GSE174321,GSE174321,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,transgenic,age rule: age with unit,adult,7 months,extracted field,male,GSE174321:5XFAD (Tg6799),5XFAD (Tg6799),,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,18.7727273196591,platform_constant,18.7727273196591,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38036733,,GSM5291795,,,train,hesrt,samples/GSE174321/GSM5291795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5321365,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,336,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_C45,OX_C45,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321365,,,test,hesrt,samples/GSE174647/GSM5321365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321366,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,575,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_C45,OX_C45,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321366,,,test,hesrt,samples/GSE174647/GSM5321366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.67, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321367,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,703,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_C45,OX_C45,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321367,,,test,hesrt,samples/GSE174647/GSM5321367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.76, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321368,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,435,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_C45,OX_C45,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321368,,,test,hesrt,samples/GSE174647/GSM5321368,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.76, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321369,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,6,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_C45,OX_C45,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321369,,,test,hesrt,samples/GSE174647/GSM5321369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.67, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321371,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,94,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_PDC29,OX_PDC29,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321371,,,test,hesrt,samples/GSE174647/GSM5321371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321372,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,872,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_PDC29,OX_PDC29,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321372,,,test,hesrt,samples/GSE174647/GSM5321372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321373,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,964,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_PDC29,OX_PDC29,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321373,,,test,hesrt,samples/GSE174647/GSM5321373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321374,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,677,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_PDC29,OX_PDC29,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321374,,,test,hesrt,samples/GSE174647/GSM5321374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321375,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,355,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_PDC29,OX_PDC29,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321375,,,test,hesrt,samples/GSE174647/GSM5321375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321378,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,695,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_528,OX_528,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.872202195147034,platform_constant,5.872202195147034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321378,,,test,hesrt,samples/GSE174647/GSM5321378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321380,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,721,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_528,OX_528,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321380,,,test,hesrt,samples/GSE174647/GSM5321380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321381,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,327,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.859587353090476,platform_constant,5.859587353090476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321381,,,test,hesrt,samples/GSE174647/GSM5321381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321382,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,217,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321382,,,test,hesrt,samples/GSE174647/GSM5321382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321383,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,473,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321383,,,test,hesrt,samples/GSE174647/GSM5321383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321384,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,215,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321384,,,test,hesrt,samples/GSE174647/GSM5321384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321386,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,313,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,6.049506040189034,platform_constant,6.049506040189034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321386,,,test,hesrt,samples/GSE174647/GSM5321386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321387,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,278,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.882352941176471,platform_constant,5.882352941176471,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321387,,,test,hesrt,samples/GSE174647/GSM5321387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5321388,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,404,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.879810320378547,platform_constant,5.879810320378547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321388,,,test,hesrt,samples/GSE174647/GSM5321388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321389,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,423,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.872202195147034,platform_constant,5.872202195147034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321389,,,test,hesrt,samples/GSE174647/GSM5321389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321390,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,90,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.879810320378547,platform_constant,5.879810320378547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321390,,,test,hesrt,samples/GSE174647/GSM5321390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321391,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,21,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.555555555555555,platform_constant,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321391,,,test,hesrt,samples/GSE174647/GSM5321391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321392,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,2,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321392,,,test,hesrt,samples/GSE174647/GSM5321392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321393,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,542,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321393,,,test,hesrt,samples/GSE174647/GSM5321393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321394,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,931,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321394,,,test,hesrt,samples/GSE174647/GSM5321394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321396,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,49,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321396,,,test,hesrt,samples/GSE174647/GSM5321396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321397,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,750,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321397,,,test,hesrt,samples/GSE174647/GSM5321397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321398,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,122,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.704979053851295,platform_constant,5.704979053851295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321398,,,test,hesrt,samples/GSE174647/GSM5321398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321399,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,300,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321399,,,test,hesrt,samples/GSE174647/GSM5321399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5321400,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,696,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321400,,,test,hesrt,samples/GSE174647/GSM5321400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321401,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,178,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321401,,,test,hesrt,samples/GSE174647/GSM5321401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5321402,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,443,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.859587353090476,platform_constant,5.859587353090476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321402,,,test,hesrt,samples/GSE174647/GSM5321402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321403,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,682,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321403,,,test,hesrt,samples/GSE174647/GSM5321403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321404,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,222,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.555555555555555,platform_constant,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321404,,,test,hesrt,samples/GSE174647/GSM5321404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM5321405,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,575,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321405,,,test,hesrt,samples/GSE174647/GSM5321405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321406,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,422,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321406,,,test,hesrt,samples/GSE174647/GSM5321406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321407,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,36,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321407,,,test,hesrt,samples/GSE174647/GSM5321407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321408,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,513,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_535,OX_535,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321408,,,test,hesrt,samples/GSE174647/GSM5321408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5321409,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,435,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_535,OX_535,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.555555555555555,platform_constant,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321409,,,test,hesrt,samples/GSE174647/GSM5321409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321410,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,214,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_535,OX_535,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321410,,,test,hesrt,samples/GSE174647/GSM5321410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321411,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,79,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_535,OX_535,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321411,,,test,hesrt,samples/GSE174647/GSM5321411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321413,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,48,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321413,,,test,hesrt,samples/GSE174647/GSM5321413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321414,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,73,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321414,,,test,hesrt,samples/GSE174647/GSM5321414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321415,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,777,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321415,,,test,hesrt,samples/GSE174647/GSM5321415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321416,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,704,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321416,,,test,hesrt,samples/GSE174647/GSM5321416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321417,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,806,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321417,,,test,hesrt,samples/GSE174647/GSM5321417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321418,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,530,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321418,,,test,hesrt,samples/GSE174647/GSM5321418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321419,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,401,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321419,,,test,hesrt,samples/GSE174647/GSM5321419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM5321420,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,204,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321420,,,test,hesrt,samples/GSE174647/GSM5321420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321421,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,234,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321421,,,test,hesrt,samples/GSE174647/GSM5321421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321422,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,677,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321422,,,test,hesrt,samples/GSE174647/GSM5321422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321423,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,805,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321423,,,test,hesrt,samples/GSE174647/GSM5321423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321424,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,887,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_585,OX_585,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321424,,,test,hesrt,samples/GSE174647/GSM5321424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 0.98}",,
GSM5321425,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,472,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.713120009277128,platform_constant,5.713120009277128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321425,,,test,hesrt,samples/GSE174647/GSM5321425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321426,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,348,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321426,,,test,hesrt,samples/GSE174647/GSM5321426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321427,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,801,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321427,,,test,hesrt,samples/GSE174647/GSM5321427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321428,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,737,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321428,,,test,hesrt,samples/GSE174647/GSM5321428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321429,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,628,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321429,,,test,hesrt,samples/GSE174647/GSM5321429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5321430,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,828,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321430,,,test,hesrt,samples/GSE174647/GSM5321430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321431,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,167,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321431,,,test,hesrt,samples/GSE174647/GSM5321431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321435,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,239,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321435,,,test,hesrt,samples/GSE174647/GSM5321435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321436,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,395,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321436,,,test,hesrt,samples/GSE174647/GSM5321436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321437,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,553,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321437,,,test,hesrt,samples/GSE174647/GSM5321437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321438,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,89,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321438,,,test,hesrt,samples/GSE174647/GSM5321438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321439,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,810,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321439,,,test,hesrt,samples/GSE174647/GSM5321439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321440,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,198,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_407,OX_407,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321440,,,test,hesrt,samples/GSE174647/GSM5321440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321442,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,453,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321442,,,test,hesrt,samples/GSE174647/GSM5321442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321443,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,340,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321443,,,test,hesrt,samples/GSE174647/GSM5321443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321444,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,577,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321444,,,test,hesrt,samples/GSE174647/GSM5321444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321445,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,344,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321445,,,test,hesrt,samples/GSE174647/GSM5321445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321446,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,92,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321446,,,test,hesrt,samples/GSE174647/GSM5321446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321447,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,275,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_438,OX_438,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321447,,,test,hesrt,samples/GSE174647/GSM5321447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321448,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,100,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.713120009277128,platform_constant,5.713120009277128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321448,,,test,hesrt,samples/GSE174647/GSM5321448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321449,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,199,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321449,,,test,hesrt,samples/GSE174647/GSM5321449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321450,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,61,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321450,,,test,hesrt,samples/GSE174647/GSM5321450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321451,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,723,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321451,,,test,hesrt,samples/GSE174647/GSM5321451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321452,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,381,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321452,,,test,hesrt,samples/GSE174647/GSM5321452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321453,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,950,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_536,OX_536,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321453,,,test,hesrt,samples/GSE174647/GSM5321453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321454,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,35,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321454,,,test,hesrt,samples/GSE174647/GSM5321454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321455,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,866,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321455,,,test,hesrt,samples/GSE174647/GSM5321455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321456,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,2,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321456,,,test,hesrt,samples/GSE174647/GSM5321456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321457,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,577,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321457,,,test,hesrt,samples/GSE174647/GSM5321457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321459,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,74,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321459,,,test,hesrt,samples/GSE174647/GSM5321459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321460,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,744,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321460,,,test,hesrt,samples/GSE174647/GSM5321460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321461,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,740,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321461,,,test,hesrt,samples/GSE174647/GSM5321461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321462,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,717,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321462,,,test,hesrt,samples/GSE174647/GSM5321462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321463,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,160,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321463,,,test,hesrt,samples/GSE174647/GSM5321463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321464,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,869,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321464,,,test,hesrt,samples/GSE174647/GSM5321464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321465,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,701,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_586,OX_586,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321465,,,test,hesrt,samples/GSE174647/GSM5321465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5321466,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,117,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321466,,,test,hesrt,samples/GSE174647/GSM5321466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321468,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,583,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321468,,,test,hesrt,samples/GSE174647/GSM5321468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321469,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,104,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.555555555555555,platform_constant,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321469,,,test,hesrt,samples/GSE174647/GSM5321469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5321470,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,417,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321470,,,test,hesrt,samples/GSE174647/GSM5321470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5321472,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,450,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321472,,,test,hesrt,samples/GSE174647/GSM5321472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321473,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,404,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321473,,,test,hesrt,samples/GSE174647/GSM5321473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321475,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,293,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321475,,,test,hesrt,samples/GSE174647/GSM5321475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321477,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,161,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321477,,,test,hesrt,samples/GSE174647/GSM5321477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5321480,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,511,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321480,,,test,hesrt,samples/GSE174647/GSM5321480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321481,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,45,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321481,,,test,hesrt,samples/GSE174647/GSM5321481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321482,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,407,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321482,,,test,hesrt,samples/GSE174647/GSM5321482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321483,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,482,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_584,OX_584,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321483,,,test,hesrt,samples/GSE174647/GSM5321483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321484,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,854,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321484,,,test,hesrt,samples/GSE174647/GSM5321484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321485,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,407,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321485,,,test,hesrt,samples/GSE174647/GSM5321485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321486,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,322,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321486,,,test,hesrt,samples/GSE174647/GSM5321486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321487,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,770,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321487,,,test,hesrt,samples/GSE174647/GSM5321487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321488,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,941,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321488,,,test,hesrt,samples/GSE174647/GSM5321488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321489,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,911,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321489,,,test,hesrt,samples/GSE174647/GSM5321489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321490,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,908,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321490,,,test,hesrt,samples/GSE174647/GSM5321490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321491,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,955,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321491,,,test,hesrt,samples/GSE174647/GSM5321491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321492,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,991,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321492,,,test,hesrt,samples/GSE174647/GSM5321492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321493,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,677,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321493,,,test,hesrt,samples/GSE174647/GSM5321493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321494,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,470,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321494,,,test,hesrt,samples/GSE174647/GSM5321494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321495,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,409,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_510,OX_510,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321495,,,test,hesrt,samples/GSE174647/GSM5321495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321496,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,242,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_523,OX_523,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321496,,,test,hesrt,samples/GSE174647/GSM5321496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321497,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,162,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_523,OX_523,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321497,,,test,hesrt,samples/GSE174647/GSM5321497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321498,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,856,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_523,OX_523,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321498,,,test,hesrt,samples/GSE174647/GSM5321498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321499,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,731,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_523,OX_523,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321499,,,test,hesrt,samples/GSE174647/GSM5321499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321500,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,690,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_523,OX_523,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321500,,,test,hesrt,samples/GSE174647/GSM5321500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321501,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,403,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_523,OX_523,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321501,,,test,hesrt,samples/GSE174647/GSM5321501,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321502,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,388,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_523,OX_523,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321502,,,test,hesrt,samples/GSE174647/GSM5321502,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321504,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,2,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_523,OX_523,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321504,,,test,hesrt,samples/GSE174647/GSM5321504,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5321506,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,340,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_523,OX_523,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.704979053851295,platform_constant,5.704979053851295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321506,,,test,hesrt,samples/GSE174647/GSM5321506,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321507,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,98,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_523,OX_523,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321507,,,test,hesrt,samples/GSE174647/GSM5321507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321508,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,470,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321508,,,test,hesrt,samples/GSE174647/GSM5321508,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5321509,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,487,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321509,,,test,hesrt,samples/GSE174647/GSM5321509,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321510,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,592,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321510,,,test,hesrt,samples/GSE174647/GSM5321510,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321511,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,764,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321511,,,test,hesrt,samples/GSE174647/GSM5321511,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321512,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,884,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321512,,,test,hesrt,samples/GSE174647/GSM5321512,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321513,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,715,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321513,,,test,hesrt,samples/GSE174647/GSM5321513,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321515,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,225,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_C36,OX_C36,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321515,,,test,hesrt,samples/GSE174647/GSM5321515,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.65, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321516,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,351,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_C36,OX_C36,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321516,,,test,hesrt,samples/GSE174647/GSM5321516,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.76, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5321517,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,613,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_C36,OX_C36,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321517,,,test,hesrt,samples/GSE174647/GSM5321517,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321518,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,813,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_C36,OX_C36,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321518,,,test,hesrt,samples/GSE174647/GSM5321518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.75, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321519,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,689,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_C36,OX_C36,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321519,,,test,hesrt,samples/GSE174647/GSM5321519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.73, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321520,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,341,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_528,OX_528,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321520,,,test,hesrt,samples/GSE174647/GSM5321520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5321521,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,268,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_528,OX_528,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321521,,,test,hesrt,samples/GSE174647/GSM5321521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5321522,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,661,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_528,OX_528,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321522,,,test,hesrt,samples/GSE174647/GSM5321522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321523,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,28,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_528,OX_528,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.555555555555555,platform_constant,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321523,,,test,hesrt,samples/GSE174647/GSM5321523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321524,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,864,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_528,OX_528,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321524,,,test,hesrt,samples/GSE174647/GSM5321524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM5321525,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,66,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_528,OX_528,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321525,,,test,hesrt,samples/GSE174647/GSM5321525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321526,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,230,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Spatial transcriptomics,,,spot,19456,counts,um,1.0,verified,,,,,,,VERIFIED,,,,35726057,,GSM5321526,,,test,sda-all,samples/GSE174647/GSM5321526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321527,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,96,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Spatial transcriptomics,,,spot,19456,counts,um,1.0,verified,,,,,,,VERIFIED,,,,35726057,,GSM5321527,,,test,sda-all,samples/GSE174647/GSM5321527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM5321528,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,611,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Spatial transcriptomics,,,spot,19456,counts,um,1.0,verified,,,,,,,VERIFIED,,,,35726057,,GSM5321528,,,test,sda-all,samples/GSE174647/GSM5321528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321529,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,221,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Spatial transcriptomics,,,spot,19456,counts,um,1.0,verified,,,,,,,VERIFIED,,,,35726057,,GSM5321529,,,test,sda-all,samples/GSE174647/GSM5321529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321530,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,217,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Spatial transcriptomics,,,spot,19456,counts,um,1.0,verified,,,,,,,VERIFIED,,,,35726057,,GSM5321530,,,test,sda-all,samples/GSE174647/GSM5321530,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321531,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,805,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321531,,,test,hesrt,samples/GSE174647/GSM5321531,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321532,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,555,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321532,,,test,hesrt,samples/GSE174647/GSM5321532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321533,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,944,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321533,,,test,hesrt,samples/GSE174647/GSM5321533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321534,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,696,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321534,,,test,hesrt,samples/GSE174647/GSM5321534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321535,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,650,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321535,,,test,hesrt,samples/GSE174647/GSM5321535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321536,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,868,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_527,OX_527,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321536,,,test,hesrt,samples/GSE174647/GSM5321536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321537,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,499,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321537,,,test,hesrt,samples/GSE174647/GSM5321537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321538,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,3,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321538,,,test,hesrt,samples/GSE174647/GSM5321538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321539,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,483,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321539,,,test,hesrt,samples/GSE174647/GSM5321539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321540,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,108,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321540,,,test,hesrt,samples/GSE174647/GSM5321540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321541,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,441,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321541,,,test,hesrt,samples/GSE174647/GSM5321541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5321542,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,772,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321542,,,test,hesrt,samples/GSE174647/GSM5321542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321543,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,824,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321543,,,test,hesrt,samples/GSE174647/GSM5321543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321545,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,749,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321545,,,test,hesrt,samples/GSE174647/GSM5321545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321546,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,130,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321546,,,test,hesrt,samples/GSE174647/GSM5321546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5321547,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,451,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_535,OX_535,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321547,,,test,hesrt,samples/GSE174647/GSM5321547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321548,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,67,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_535,OX_535,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321548,,,test,hesrt,samples/GSE174647/GSM5321548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321549,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,624,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_535,OX_535,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321549,,,test,hesrt,samples/GSE174647/GSM5321549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321550,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,394,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_535,OX_535,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.555555555555555,platform_constant,5.555555555555555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321550,,,test,hesrt,samples/GSE174647/GSM5321550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321551,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,618,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_535,OX_535,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321551,,,test,hesrt,samples/GSE174647/GSM5321551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5321552,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,848,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_535,OX_535,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321552,,,test,hesrt,samples/GSE174647/GSM5321552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5321553,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,642,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321553,,,test,hesrt,samples/GSE174647/GSM5321553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321554,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,4,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321554,,,test,hesrt,samples/GSE174647/GSM5321554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321555,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,120,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.708464785735384,platform_constant,5.708464785735384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321555,,,test,hesrt,samples/GSE174647/GSM5321555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321556,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,185,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_530,OX_530,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321556,,,test,hesrt,samples/GSE174647/GSM5321556,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321558,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,579,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321558,,,test,hesrt,samples/GSE174647/GSM5321558,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321559,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,505,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321559,,,test,hesrt,samples/GSE174647/GSM5321559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321560,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,783,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321560,,,test,hesrt,samples/GSE174647/GSM5321560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321561,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,186,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321561,,,test,hesrt,samples/GSE174647/GSM5321561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321562,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,477,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321562,,,test,hesrt,samples/GSE174647/GSM5321562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321563,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,397,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,MS,MS,luna,not stated,,not stated,,GSE174647:OX_342,OX_342,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.7119547797753984,platform_constant,5.7119547797753984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321563,,,test,hesrt,samples/GSE174647/GSM5321563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5321564,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,278,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_PDC22,OX_PDC22,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321564,,,test,hesrt,samples/GSE174647/GSM5321564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.72, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5321565,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,3,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_PDC22,OX_PDC22,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321565,,,test,hesrt,samples/GSE174647/GSM5321565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5321566,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,608,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_PDC22,OX_PDC22,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.714285714285714,platform_constant,5.714285714285714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321566,,,test,hesrt,samples/GSE174647/GSM5321566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5321567,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,787,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_PDC22,OX_PDC22,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.819759619793254,platform_constant,5.819759619793254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321567,,,test,hesrt,samples/GSE174647/GSM5321567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM5321568,brain,disease,multiple sclerosis,cerebral cortex,primary tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),True,H&E,712,Identification of early neurodegenerative pathways in progressive multiple sclerosis,GSE174647,GSE174647,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,brain cortex,MONDO:0005301,luna,,HI,luna,not stated,,not stated,,GSE174647:OX_PDC22,OX_PDC22,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19456,counts,pixel,5.879810320378547,platform_constant,5.879810320378547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35726057,,GSM5321568,,,test,hesrt,samples/GSE174647/GSM5321568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5924030,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4510,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.8664384328165355,platform_constant,3.8664384328165355,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924030,,,train,hesrt,samples/GSE175540/GSM5924030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924031,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4755,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.885779883096601,platform_constant,3.885779883096601,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-9baa1d1e0f25,cross_gse_redeposit,GSM8440295,train,hesrt,samples/GSE175540/GSM5924031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924032,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3829,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.8603879293001206,platform_constant,3.8603879293001206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-46629a0da079,cross_gse_redeposit,GSM8440296,train,hesrt,samples/GSE175540/GSM5924032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5924033,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4975,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9480975731977987,platform_constant,3.9480975731977987,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-67f978fc00ab,cross_gse_redeposit,GSM8440298,train,hesrt,samples/GSE175540/GSM5924033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5924034,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4860,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.8885319996379897,platform_constant,3.8885319996379897,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924034,,,train,hesrt,samples/GSE175540/GSM5924034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924035,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4948,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.910185259322293,platform_constant,3.910185259322293,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-0889fbc16d13,cross_gse_redeposit,GSM8440299,train,hesrt,samples/GSE175540/GSM5924035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924036,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4915,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.967592655578104,platform_constant,3.967592655578104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924036,,,train,hesrt,samples/GSE175540/GSM5924036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924037,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3585,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9138889327244235,platform_constant,3.9138889327244235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-7ccd33d56775,cross_gse_redeposit,GSM8440307,train,hesrt,samples/GSE175540/GSM5924037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924038,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3206,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.868807246714235,platform_constant,3.868807246714235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-25aa9d1085b5,cross_gse_redeposit,GSM8440301,train,hesrt,samples/GSE175540/GSM5924038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924039,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4940,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.971296321633138,platform_constant,3.971296321633138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924039,,,train,hesrt,samples/GSE175540/GSM5924039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924040,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4562,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.903703717757041,platform_constant,3.903703717757041,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924040,,,train,hesrt,samples/GSE175540/GSM5924040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924041,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4359,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9249999085474974,platform_constant,3.9249999085474974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-b432ff0847be,cross_gse_redeposit,GSM8440311,train,hesrt,samples/GSE175540/GSM5924041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924042,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1451,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.403623507225773,platform_constant,4.403623507225773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924042,,,train,hesrt,samples/GSE175540/GSM5924042,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924043,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1439,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.521100871135091,platform_constant,4.521100871135091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924043,,,train,hesrt,samples/GSE175540/GSM5924043,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5924044,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1983,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.844036681746746,platform_constant,4.844036681746746,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924044,,,train,hesrt,samples/GSE175540/GSM5924044,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924045,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1696,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.403669837504559,platform_constant,4.403669837504559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924045,,,train,hesrt,samples/GSE175540/GSM5924045,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924046,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1949,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.521100871135091,platform_constant,4.521100871135091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924046,,,train,hesrt,samples/GSE175540/GSM5924046,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924047,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2374,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.844036681746773,platform_constant,4.844036681746773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924047,,,train,hesrt,samples/GSE175540/GSM5924047,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924048,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1678,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.260274309260301,platform_constant,5.260274309260301,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924048,,,train,hesrt,samples/GSE175540/GSM5924048,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924049,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1186,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.844036681746773,platform_constant,4.844036681746773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,GSM5924049,,,train,hesrt,samples/GSE175540/GSM5924049,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924050,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1349,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.462385218287565,platform_constant,4.462385218287565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-d0a7c6f62c01,cross_gse_redeposit,GSM8440294,train,hesrt,samples/GSE175540/GSM5924050,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5924051,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2007,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.8440366817467995,platform_constant,4.8440366817467995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-8dba471f046c,cross_gse_redeposit,GSM8440297,train,hesrt,samples/GSE175540/GSM5924051,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5924052,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2580,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.383561756054834,platform_constant,4.383561756054834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-1ff53edc6224,cross_gse_redeposit,GSM8440300,train,hesrt,samples/GSE175540/GSM5924052,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5924053,kidney,disease,renal cell adenocarcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1084,Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer,GSE175540,GSE175540,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,ccRCC tumor,MONDO:0005549,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.558904128262326,platform_constant,4.558904128262326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35231421,,CG-c2563cc48122,cross_gse_redeposit,GSM8440302,train,hesrt,samples/GSE175540/GSM5924053,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5355663,heart,normal,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1689,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5355663,,,test,sda-all,samples/GSE176092/GSM5355663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5355666,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3154,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5355666,,,test,sda-all,samples/GSE176092/GSM5355666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5355668,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1153,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5355668,,,test,sda-all,samples/GSE176092/GSM5355668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM5943189,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1577,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943189,,,test,sda-all,samples/GSE176092/GSM5943189,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5943190,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1640,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943190,,,test,sda-all,samples/GSE176092/GSM5943190,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5943191,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1457,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943191,,,test,sda-all,samples/GSE176092/GSM5943191,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5943192,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,920,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943192,,,test,sda-all,samples/GSE176092/GSM5943192,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5943193,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1301,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943193,,,test,sda-all,samples/GSE176092/GSM5943193,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5943194,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1806,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943194,,,test,sda-all,samples/GSE176092/GSM5943194,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5943195,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1425,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943195,,,test,sda-all,samples/GSE176092/GSM5943195,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5943196,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1569,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943196,,,test,sda-all,samples/GSE176092/GSM5943196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5943197,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1845,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943197,,,test,sda-all,samples/GSE176092/GSM5943197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5943198,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1035,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943198,,,test,sda-all,samples/GSE176092/GSM5943198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5943199,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1536,Spatiotemporal transcriptome analysis reveals critical roles for mechano-sensing genes at the border zone in remodeling after myocardial infarction,GSE176092,GSE176092,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM5943199,,,test,sda-all,samples/GSE176092/GSM5943199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5384657,colon,normal,,colon,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,1326,SpotClean adjusts for spot swapping in spatial transcriptomics data,GSE178221,GSE178221,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,Homo sapiens; Mus musculus,,uberon_chain,UBERON:0001155,Mouse colon and human skin,,luna,,wild type,luna,adult,10 week old mouse and 52 year old human,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,2.0408163265306123,platform_constant,2.0408163265306123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35624112,,GSM5384657,,,train,hesrt,samples/GSE178221/GSM5384657,sda-tissue-disease-2.4,"{""organ"": 0.58, ""sample_kind"": 0.49, ""disease_status"": 0.8, ""uberon"": 0.32, ""life_stage"": 0.9400000000000001}",organ;sample_kind;uberon,low_confidence_annotation
GSM5384658,small intestine,normal,,duodenum,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,2030,SpotClean adjusts for spot swapping in spatial transcriptomics data,GSE178221,GSE178221,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,Homo sapiens; Mus musculus,,luna,UBERON:0002114,Mouse duodenum and human skin,,luna,,wild type,luna,adult,10 week old mouse and 52 year old human,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,2.0104818294981226,platform_constant,2.0104818294981226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35624112,,GSM5384658,,,train,hesrt,samples/GSE178221/GSM5384658,sda-tissue-disease-2.4,"{""organ"": 0.67, ""sample_kind"": 0.93, ""disease_status"": 0.73, ""uberon"": 0.62, ""life_stage"": 0.9500000000000001}",,
GSM5384659,heart,normal,,heart,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,1900,SpotClean adjusts for spot swapping in spatial transcriptomics data,GSE178221,GSE178221,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,Homo sapiens; Mus musculus,,luna,UBERON:0000948,Mouse heart and human skin,,luna,,wild type,luna,adult,10 week old mouse and 52 year old human,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,2.0,platform_constant,2.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35624112,,GSM5384659,,,train,hesrt,samples/GSE178221/GSM5384659,sda-tissue-disease-2.4,"{""organ"": 0.36, ""sample_kind"": 0.79, ""disease_status"": 0.81, ""uberon"": 0.42, ""life_stage"": 0.93}",organ;uberon,low_confidence_annotation
GSM5388414,airway,normal,,respiratory tube,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,1175,Human distal lung maps and lineage hierarchies reveal a bipotent progenitor [Spatial transcriptomics],GSE178361,GSE178361+GSE178362,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0000117,lung tissue,,luna,normal,Normal,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.815022963982177,platform_constant,4.815022963982177,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35355018,,GSM5388414,,,train,hesrt,samples/GSE178361/GSM5388414,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM5388415,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,1045,Human distal lung maps and lineage hierarchies reveal a bipotent progenitor [Spatial transcriptomics],GSE178361,GSE178361+GSE178362,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tissue,,luna,normal,Normal,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.878033782080764,platform_constant,4.878033782080764,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35355018,,GSM5388415,,,train,hesrt,samples/GSE178361/GSM5388415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5395087,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,487,Spatiotemporal transcriptomes of mouse embryo,GSE178636,GSE178636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,9.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,54838,counts,pixel,4.266576991589823,platform_constant,4.266576991589823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36857617,,GSM5395087,,,train,hesrt,samples/GSE178636/GSM5395087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5395088,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,1052,Spatiotemporal transcriptomes of mouse embryo,GSE178636,GSE178636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,10.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,54838,counts,pixel,4.929346624194788,platform_constant,4.929346624194788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36857617,,GSM5395088,,,train,hesrt,samples/GSE178636/GSM5395088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5395089,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,1643,Spatiotemporal transcriptomes of mouse embryo,GSE178636,GSE178636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,11.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,54838,counts,pixel,4.846576581869805,platform_constant,4.846576581869805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36857617,,GSM5395089,,,train,hesrt,samples/GSE178636/GSM5395089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5395090,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,2782,Spatiotemporal transcriptomes of mouse embryo,GSE178636,GSE178636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,12.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,54838,counts,pixel,4.63945752545739,platform_constant,4.63945752545739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36857617,,GSM5395090,,,train,hesrt,samples/GSE178636/GSM5395090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6443210,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,949,Integrated spatial multi-omics reveals fibroblast fate during tissue repair,GSE178758,GSE178758,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin wounds,,luna,,POD 0 (unwounded),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.80821821294417,platform_constant,4.80821821294417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34620713,,GSM6443210,,,train,hesrt,samples/GSE178758/GSM6443210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6443211,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1088,Integrated spatial multi-omics reveals fibroblast fate during tissue repair,GSE178758,GSE178758,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin wounds,,luna,,POD 2,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.372009928651815,platform_constant,4.372009928651815,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34620713,,GSM6443211,,,train,hesrt,samples/GSE178758/GSM6443211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.65, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6443212,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1671,Integrated spatial multi-omics reveals fibroblast fate during tissue repair,GSE178758,GSE178758,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin wounds,,luna,,POD 7,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.800394060032115,platform_constant,4.800394060032115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34620713,,GSM6443212,,,train,hesrt,samples/GSE178758/GSM6443212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.67, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6443213,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,720,Integrated spatial multi-omics reveals fibroblast fate during tissue repair,GSE178758,GSE178758,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin wounds,,luna,,POD 14,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.366412084494655,platform_constant,4.366412084494655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34620713,,GSM6443213,,,train,hesrt,samples/GSE178758/GSM6443213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.78, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5420749,brain,disease,brain neoplasm;lung adenocarcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2112,Spatial transcriptomics of human brain metastases,GSE179572,GSE179572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0005061,luna,lung adenocarcinoma,brain metastasis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.633548098982753,platform_constant,4.633548098982753,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420749,,,train,hesrt,samples/GSE179572/GSM5420749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5420750,brain,disease,brain neoplasm;melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1716,Spatial transcriptomics of human brain metastases,GSE179572,GSE179572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0005105,luna,melanoma,brain metastasis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.095483981335921,platform_constant,5.095483981335921,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420750,,,train,hesrt,samples/GSE179572/GSM5420750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5420751,brain,disease,brain neoplasm;lung adenocarcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,946,Spatial transcriptomics of human brain metastases,GSE179572,GSE179572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0005061,luna,lung adenocarcinoma,brain metastasis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.6374192487345685,platform_constant,4.6374192487345685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420751,,,train,hesrt,samples/GSE179572/GSM5420751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5420752,brain,disease,nonpapillary renal cell carcinoma;brain neoplasm,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1298,Spatial transcriptomics of human brain metastases,GSE179572,GSE179572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0007763;MONDO:0021211,luna,renal cell carcinoma (clear cell),brain metastasis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.622903305320407,platform_constant,4.622903305320407,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420752,,,train,hesrt,samples/GSE179572/GSM5420752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5420753,brain,disease,brain neoplasm;breast carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4342,Spatial transcriptomics of human brain metastases,GSE179572,GSE179572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0004989,luna,breast carcinoma,brain metastasis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.633225988977563,platform_constant,4.633225988977563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420753,,,train,hesrt,samples/GSE179572/GSM5420753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5420754,brain,disease,brain neoplasm;lung adenocarcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2152,Spatial transcriptomics of human brain metastases,GSE179572,GSE179572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0005061,luna,lung adenocarcinoma,brain metastasis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.6354840313554915,platform_constant,4.6354840313554915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35584630;35707680,,GSM5420754,,,train,hesrt,samples/GSE179572/GSM5420754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5467944,other,perturbation,,digit,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,1007,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,GSE180682,GSE180682,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002544,Digit,,luna,,D10 Blastema [A1],luna,aged,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.371802511732713,platform_constant,4.371802511732713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5467944,,,train,hesrt,samples/GSE180682/GSM5467944,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.5, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM5467945,other,perturbation,,digit,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1234,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,GSE180682,GSE180682,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002544,Digit,,luna,,D10 Blastema [B1],luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.368022997270666,platform_constant,4.368022997270666,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5467945,,,train,hesrt,samples/GSE180682/GSM5467945,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.49, ""life_stage"": 0.65}",organ;uberon,low_confidence_annotation
GSM5467946,other,perturbation,,digit,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,993,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,GSE180682,GSE180682,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002544,Digit,,luna,,D10 Blastema [C1],luna,aged,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.3642444428604525,platform_constant,4.3642444428604525,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5467946,,,train,hesrt,samples/GSE180682/GSM5467946,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.51, ""life_stage"": 0.81}",organ;uberon,low_confidence_annotation
GSM5467947,other,perturbation,,digit,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,1304,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,GSE180682,GSE180682,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002544,Digit,,luna,,D10 Blastema [D1],luna,aged,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.369112169696847,platform_constant,4.369112169696847,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5467947,,,train,hesrt,samples/GSE180682/GSM5467947,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.46, ""life_stage"": 0.56}",uberon;life_stage,low_confidence_annotation
GSM5896868,other,perturbation,,digit,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,1538,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,GSE180682,GSE180682,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002544,Digit,,luna,,OAA-treated Aged Digit D21 [A1],luna,aged,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.370930215948597,platform_constant,4.370930215948597,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5896868,,,train,hesrt,samples/GSE180682/GSM5896868,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5896869,other,perturbation,,digit,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,1541,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,GSE180682,GSE180682,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002544,Digit,,luna,,OAA-treated Aged Digit D21 [B1],luna,aged,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.370856344609203,platform_constant,4.370856344609203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5896869,,,train,hesrt,samples/GSE180682/GSM5896869,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5896870,other,perturbation,,digit,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,1314,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,GSE180682,GSE180682,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002544,Digit,,luna,,OAA-treated Aged Digit D21 [C1],luna,aged,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.350000103530009,platform_constant,4.350000103530009,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5896870,,,train,hesrt,samples/GSE180682/GSM5896870,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5896871,other,perturbation,,digit,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,1137,Spatial transcriptomics reveals increased energetic requirements underpinning age-dependent declines in digit regeneration rescued through administration of OAA,GSE180682,GSE180682,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002544,Digit,,luna,,OAA-treated Aged Digit D21 [D1],luna,aged,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.352035224050076,platform_constant,4.352035224050076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35616636,,GSM5896871,,,train,hesrt,samples/GSE180682/GSM5896871,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5494475,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1155,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,GSE181300,GSE181300,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,head and neck,MONDO:0010150,luna,head and neck squamous carcinoma,Primary Tumor (Invasive front),luna,not stated,,not stated,,GSE181300:1,1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.068939567845868,platform_constant,4.068939567845868,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494475,,,val,hesrt,samples/GSE181300/GSM5494475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM5494476,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1726,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,GSE181300,GSE181300,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,head and neck,MONDO:0010150,luna,head and neck squamous carcinoma,Primary Tumor (Invasive front),luna,not stated,,not stated,,GSE181300:1,1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.053787810035633,platform_constant,4.053787810035633,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494476,,,val,hesrt,samples/GSE181300/GSM5494476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM5494477,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1191,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,GSE181300,GSE181300,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,head and neck,MONDO:0010150,luna,head and neck squamous carcinoma,Primary Tumor (Inner site),luna,not stated,,not stated,,GSE181300:1,1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.065384481125283,platform_constant,4.065384481125283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494477,,,val,hesrt,samples/GSE181300/GSM5494477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM5494478,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1522,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,GSE181300,GSE181300,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,head and neck,MONDO:0010150,luna,head and neck squamous carcinoma,Primary Tumor (Inner site),luna,not stated,,not stated,,GSE181300:1,1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.165384769503849,platform_constant,4.165384769503849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494478,,,val,hesrt,samples/GSE181300/GSM5494478,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5494479,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2197,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,GSE181300,GSE181300,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,head and neck,MONDO:0010150,luna,head and neck squamous carcinoma,Primary Tumor (Invasive front),luna,not stated,,not stated,,GSE181300:2,2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.604269681606429,platform_constant,4.604269681606429,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494479,,,val,hesrt,samples/GSE181300/GSM5494479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM5494480,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1853,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,GSE181300,GSE181300,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,head and neck,MONDO:0010150,luna,head and neck squamous carcinoma,Primary Tumor (Invasive front),luna,not stated,,not stated,,GSE181300:2,2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.585452503497427,platform_constant,4.585452503497427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494480,,,val,hesrt,samples/GSE181300/GSM5494480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM5494481,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1470,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,GSE181300,GSE181300,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,head and neck,MONDO:0010150,luna,head and neck squamous carcinoma,Primary Tumor (Inner site),luna,not stated,,not stated,,GSE181300:2,2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.604269681606429,platform_constant,4.604269681606429,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494481,,,val,hesrt,samples/GSE181300/GSM5494481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM5494482,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,924,Visium Analysis of head and neck squamous carcinoma (HNSCC) spatial transcriptome evolution,GSE181300,GSE181300,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,head and neck,MONDO:0010150,luna,head and neck squamous carcinoma,Primary Tumor (Inner site),luna,not stated,,not stated,,GSE181300:2,2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.018748994943713,platform_constant,5.018748994943713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36002186,,GSM5494482,,,val,hesrt,samples/GSE181300/GSM5494482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM5519054,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2679,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,GSE182127,GSE182127,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,,luna,,"control, no treatment (untouched brain)",age rule: age with unit,adult,10–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26124,counts,pixel,5.0105425688414735,platform_constant,5.0105425688414735,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519054,,,train,hesrt,samples/GSE182127/GSM5519054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5519055,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2936,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,GSE182127,GSE182127,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,,luna,,10 nmol heme-hemopexin in 10 µL (10 µL of 1000 µmol/L),age rule: age with unit,adult,10–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26124,counts,pixel,4.997870119050088,platform_constant,4.997870119050088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519055,,,train,hesrt,samples/GSE182127/GSM5519055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5519056,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2597,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,GSE182127,GSE182127,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,,luna,,0.3 nmol heme-albumin in 10 µL (10 µL of 30 µmol/L),age rule: age with unit,adult,10–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26124,counts,pixel,4.5008782083688175,platform_constant,4.5008782083688175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519056,,,train,hesrt,samples/GSE182127/GSM5519056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5519057,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2427,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,GSE182127,GSE182127,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,,luna,,1.25 nmol heme-albumin in 10 µL (10 µL of 125 µmol/L),age rule: age with unit,adult,10–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26124,counts,pixel,5.242272002504274,platform_constant,5.242272002504274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519057,,,train,hesrt,samples/GSE182127/GSM5519057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5519058,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2694,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,GSE182127,GSE182127,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,,luna,,5.0 nmol heme-albumin in 10 µL (10 µL of 500 µmol/L),age rule: age with unit,adult,10–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26124,counts,pixel,5.041319344920713,platform_constant,5.041319344920713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519058,,,train,hesrt,samples/GSE182127/GSM5519058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5519059,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2953,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,GSE182127,GSE182127,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,,luna,,10 nmol heme-albumin in 10 µL (10 µL of 1000 µmol/L),age rule: age with unit,adult,10–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26124,counts,pixel,4.997870119050088,platform_constant,4.997870119050088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519059,,,train,hesrt,samples/GSE182127/GSM5519059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5519060,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2780,Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain,GSE182127,GSE182127,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,,luna,,10 µL saline (sham),age rule: age with unit,adult,10–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26124,counts,pixel,4.496996584250453,platform_constant,4.496996584250453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34793930,,GSM5519060,,,train,hesrt,samples/GSE182127/GSM5519060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5531131,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2603,Endothelial Phospholipase C gamma2 Improves Outcomes of Diabetic Ischemic Limb Rescue Following VEGF Therapy,GSE182208,GSE182208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,unwounded skin tissue,,luna,,,age rule: age in years,aged,65 years,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.260945219411324,platform_constant,4.260945219411324,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35192691;42552235,,GSM5531131,,,val,hesrt,samples/GSE182208/GSM5531131,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.44, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM5538852,other,disease,neoplasm,,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2166,Dietary palmitic acid promotes a prometastatic memory based on Schwann Cell activation,GSE182867,GSE182867,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,visium,,,spot,68886,counts,um,1.0,verified,3.917242125584516,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,34759321,,GSM5538852,,,val,sda-all,samples/GSE182867/GSM5538852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.88, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM5538853,other,disease,neoplasm,,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1130,Dietary palmitic acid promotes a prometastatic memory based on Schwann Cell activation,GSE182867,GSE182867,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,visium,,,spot,68886,counts,um,1.0,verified,3.917206922091654,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,34759321,,GSM5538853,,,val,sda-all,samples/GSE182867/GSM5538853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM5538854,other,disease,neoplasm,,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1269,Dietary palmitic acid promotes a prometastatic memory based on Schwann Cell activation,GSE182867,GSE182867,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,visium,,,spot,68886,counts,um,1.0,verified,3.966316306562737,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,34759321,,GSM5538854,,,val,sda-all,samples/GSE182867/GSM5538854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5538855,other,disease,neoplasm,,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1850,Dietary palmitic acid promotes a prometastatic memory based on Schwann Cell activation,GSE182867,GSE182867,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,visium,,,spot,68886,counts,um,1.0,verified,3.9173376538207525,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,34759321,,GSM5538855,,,val,sda-all,samples/GSE182867/GSM5538855,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM5543479,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1617,Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model,GSE182939,GSE182939,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,Sham control,age rule: age with unit,not stated,8–10 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7315658917695215,platform_constant,0.7315658917695215,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34853151,,GSM5543479,,,train,hesrt,samples/GSE182939/GSM5543479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5543480,kidney,disease,acute kidney injury,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2219,Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model,GSE182939,GSE182939,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0002492,luna,acute kidney injury,Bi-IRI surgery,age rule: age with unit,not stated,8–10 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7352742413412813,platform_constant,0.7352742413412813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34853151,,GSM5543480,,,train,hesrt,samples/GSE182939/GSM5543480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5543481,kidney,disease,acute kidney injury,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1893,Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model,GSE182939,GSE182939,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0002492,mondo_predicate (Luna: perturbation),acute kidney injury,Bi-IRI surgery,age rule: age with unit,not stated,8–10 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7299270072992701,platform_constant,0.7299270072992701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34853151,,GSM5543481,,,train,hesrt,samples/GSE182939/GSM5543481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5543482,kidney,disease,acute kidney injury,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2212,Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model,GSE182939,GSE182939,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0002492,luna,acute kidney injury,Bi-IRI surgery,age rule: age with unit,not stated,8–10 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7299270072992701,platform_constant,0.7299270072992701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34853151,,GSM5543482,,,train,hesrt,samples/GSE182939/GSM5543482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5543483,kidney,disease,acute kidney injury,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1598,Spatially resolved transcriptomic analysis of acute kidney injury in a female murine model,GSE182939,GSE182939,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0002492,luna,acute kidney injury,Bi-IRI surgery,age rule: age with unit,juvenile,8–10 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7299270072992701,platform_constant,0.7299270072992701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,34853151,,GSM5543483,,,train,hesrt,samples/GSE182939/GSM5543483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5554448,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,37310,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:3579,3579,,,release v3,sequencing-based,Slide-seq,,,bead,25631,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554448,,,train,sda-all,samples/GSE183279/GSM5554448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554449,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,38798,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:3579,3579,,,release v3,sequencing-based,Slide-seq,,,bead,25539,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554449,,,train,sda-all,samples/GSE183279/GSM5554449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554450,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,39672,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:3579,3579,,,release v3,sequencing-based,Slide-seq,,,bead,25969,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554450,,,train,sda-all,samples/GSE183279/GSM5554450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554451,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,41870,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:3579,3579,,,release v3,sequencing-based,Slide-seq,,,bead,26053,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554451,,,train,sda-all,samples/GSE183279/GSM5554451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554452,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,44978,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:3579,3579,,,release v3,sequencing-based,Slide-seq,,,bead,26379,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554452,,,train,sda-all,samples/GSE183279/GSM5554452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554453,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,42901,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:3579,3579,,,release v3,sequencing-based,Slide-seq,,,bead,25913,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554453,,,train,sda-all,samples/GSE183279/GSM5554453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554454,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,38559,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:3579,3579,,,release v3,sequencing-based,Slide-seq,,,bead,26533,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554454,,,train,sda-all,samples/GSE183279/GSM5554454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554455,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,36051,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:3579,3579,,,release v3,sequencing-based,Slide-seq,,,bead,26284,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554455,,,train,sda-all,samples/GSE183279/GSM5554455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554456,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,43477,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:3579,3579,,,release v3,sequencing-based,Slide-seq,,,bead,26092,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554456,,,train,sda-all,samples/GSE183279/GSM5554456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5554457,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,41704,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:3579,3579,,,release v3,sequencing-based,Slide-seq,,,bead,26338,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM5554457,,,train,sda-all,samples/GSE183279/GSM5554457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128246,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,13616,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,22734,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128246,,,train,sda-all,samples/GSE183279/GSM6128246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128247,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,29487,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,25770,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128247,,,train,sda-all,samples/GSE183279/GSM6128247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6128248,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,27990,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,26876,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128248,,,train,sda-all,samples/GSE183279/GSM6128248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6128249,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,20119,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,25832,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128249,,,train,sda-all,samples/GSE183279/GSM6128249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6128250,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,27064,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,25792,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128250,,,train,sda-all,samples/GSE183279/GSM6128250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM6128251,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,28499,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,25539,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128251,,,train,sda-all,samples/GSE183279/GSM6128251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM6128252,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,38012,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,27872,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128252,,,train,sda-all,samples/GSE183279/GSM6128252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128253,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,30501,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,27220,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128253,,,train,sda-all,samples/GSE183279/GSM6128253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6128254,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,36276,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,28154,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128254,,,train,sda-all,samples/GSE183279/GSM6128254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128255,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,33118,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,28251,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128255,,,train,sda-all,samples/GSE183279/GSM6128255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6128256,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,18225,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:20-576,20-576,,,release v3,sequencing-based,Slide-seq,,,bead,26715,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128256,,,train,sda-all,samples/GSE183279/GSM6128256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6128257,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,39599,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,28487,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128257,,,train,sda-all,samples/GSE183279/GSM6128257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128258,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,33911,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,27593,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128258,,,train,sda-all,samples/GSE183279/GSM6128258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128259,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,36254,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,28086,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128259,,,train,sda-all,samples/GSE183279/GSM6128259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128260,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,36938,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,28729,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128260,,,train,sda-all,samples/GSE183279/GSM6128260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128261,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,41253,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,28283,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128261,,,train,sda-all,samples/GSE183279/GSM6128261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128262,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,40112,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,28437,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128262,,,train,sda-all,samples/GSE183279/GSM6128262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128263,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,39387,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,26994,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128263,,,train,sda-all,samples/GSE183279/GSM6128263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128264,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,32638,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,27087,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128264,,,train,sda-all,samples/GSE183279/GSM6128264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128265,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,28233,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,26566,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128265,,,train,sda-all,samples/GSE183279/GSM6128265,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6128266,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,39032,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,27043,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128266,,,train,sda-all,samples/GSE183279/GSM6128266,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6128267,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,36276,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-019,21-019,,,release v3,sequencing-based,Slide-seq,,,bead,27124,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128267,,,train,sda-all,samples/GSE183279/GSM6128267,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128268,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,33034,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,28635,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128268,,,train,sda-all,samples/GSE183279/GSM6128268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6128269,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,36650,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,28581,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128269,,,train,sda-all,samples/GSE183279/GSM6128269,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128270,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,30673,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,28509,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128270,,,train,sda-all,samples/GSE183279/GSM6128270,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6128271,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,36846,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,28496,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128271,,,train,sda-all,samples/GSE183279/GSM6128271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128272,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,34958,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,29425,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128272,,,train,sda-all,samples/GSE183279/GSM6128272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128273,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,23010,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,27825,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128273,,,train,sda-all,samples/GSE183279/GSM6128273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128274,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,28191,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,28404,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128274,,,train,sda-all,samples/GSE183279/GSM6128274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128275,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,30878,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,28311,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128275,,,train,sda-all,samples/GSE183279/GSM6128275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128276,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,34992,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney Cortex,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,27960,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128276,,,train,sda-all,samples/GSE183279/GSM6128276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128277,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,40277,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Kidney Cortex / Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,29081,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128277,,,train,sda-all,samples/GSE183279/GSM6128277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6128278,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,42529,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,28870,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128278,,,train,sda-all,samples/GSE183279/GSM6128278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6128279,kidney,normal,,renal medulla,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,31064,An atlas of healthy and injured cell states and niches in the human kidney,GSE183279,GSE183279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000362,Kidney Medulla,,luna,,Reference,luna,not stated,,not stated,,GSE183279:21-020,21-020,,,release v3,sequencing-based,Slide-seq,,,bead,27992,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,37468583;39691368;39916957,,GSM6128279,,,train,sda-all,samples/GSE183279/GSM6128279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6047775,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,3627,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Reference,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047775,,,train,hesrt,samples/GSE183456/GSM6047775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6047776,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,4166,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Reference,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575540190785702,platform_constant,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047776,,,train,hesrt,samples/GSE183456/GSM6047776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6047777,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,2627,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Reference,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047777,,,train,hesrt,samples/GSE183456/GSM6047777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6047778,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,956,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Reference,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047778,,,train,hesrt,samples/GSE183456/GSM6047778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6047779,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1034,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Reference,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7591458644571283,platform_constant,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047779,,,train,hesrt,samples/GSE183456/GSM6047779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6047780,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1322,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047780,,,train,hesrt,samples/GSE183456/GSM6047780,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6047781,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,673,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575540190785702,platform_constant,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047781,,,train,hesrt,samples/GSE183456/GSM6047781,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6047782,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,673,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575540190785702,platform_constant,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047782,,,train,hesrt,samples/GSE183456/GSM6047782,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6047783,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,560,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575540190785702,platform_constant,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047783,,,train,hesrt,samples/GSE183456/GSM6047783,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6047784,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,534,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047784,,,train,hesrt,samples/GSE183456/GSM6047784,sda-tissue-disease-2.5,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6047785,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,453,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047785,,,train,hesrt,samples/GSE183456/GSM6047785,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6047786,kidney,disease,diabetic kidney disease;diabetes mellitus,cortex,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,461,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047786,,,train,hesrt,samples/GSE183456/GSM6047786,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM6047787,kidney,disease,diabetic kidney disease;diabetes mellitus,medulla of organ,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,904,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000958,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7591458644571283,platform_constant,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047787,,,train,hesrt,samples/GSE183456/GSM6047787,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM6047788,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,601,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7633587786259542,platform_constant,0.7633587786259542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047788,,,train,hesrt,samples/GSE183456/GSM6047788,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6047789,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,787,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7591458644571283,platform_constant,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047789,,,train,hesrt,samples/GSE183456/GSM6047789,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6047790,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,407,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005016;MONDO:0005015,luna,Diabetic Kidney Disease (DKD),,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7591458644571283,platform_constant,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047790,,,train,hesrt,samples/GSE183456/GSM6047790,sda-tissue-disease-2.5,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6047791,kidney,disease,acute kidney injury,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,317,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002492,luna,Acute Kidney Injury (AKI),,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047791,,,train,hesrt,samples/GSE183456/GSM6047791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6047792,kidney,disease,acute kidney injury,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,645,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002492,luna,Acute Kidney Injury (AKI),,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047792,,,train,hesrt,samples/GSE183456/GSM6047792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6047793,kidney,disease,acute kidney injury,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,673,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002492,luna,Acute Kidney Injury (AKI),,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047793,,,train,hesrt,samples/GSE183456/GSM6047793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6047794,kidney,disease,acute kidney injury,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,640,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002492,luna,Acute Kidney Injury (AKI),,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7620278021771029,platform_constant,0.7620278021771029,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047794,,,train,hesrt,samples/GSE183456/GSM6047794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM6047795,kidney,disease,acute kidney injury,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,507,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002492,luna,Acute Kidney Injury (AKI),,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7591458644571283,platform_constant,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047795,,,train,hesrt,samples/GSE183456/GSM6047795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6047796,kidney,disease,acute kidney injury,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,370,Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST],GSE183456,GSE183456,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002492,luna,Acute Kidney Injury (AKI),,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575540190785702,platform_constant,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468583;39691368,,GSM6047796,,,train,hesrt,samples/GSE183456/GSM6047796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585200,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,483,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,SCI->EES::walking,luna,not stated,,not stated,,GSE184369:M11,M11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585200,,,train,hesrt,samples/GSE184369/GSM5585200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5585201,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,619,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,EESREHAB,luna,not stated,,not stated,,GSE184369:M7,M7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585201,,,train,hesrt,samples/GSE184369/GSM5585201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585202,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,652,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,EESREHAB->EES::walking,luna,not stated,,not stated,,GSE184369:M14,M14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585202,,,train,hesrt,samples/GSE184369/GSM5585202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585203,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,561,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,SCI->EES::walking,luna,not stated,,not stated,,GSE184369:M11,M11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585203,,,train,hesrt,samples/GSE184369/GSM5585203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5585204,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,574,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,EESREHAB->EES::walking,luna,not stated,,not stated,,GSE184369:M14,M14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585204,,,train,hesrt,samples/GSE184369/GSM5585204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5585205,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,444,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,SCI->EES::walking,luna,not stated,,not stated,,GSE184369:M11,M11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585205,,,train,hesrt,samples/GSE184369/GSM5585205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585206,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,704,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,EESREHAB,luna,not stated,,not stated,,GSE184369:M7,M7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585206,,,train,hesrt,samples/GSE184369/GSM5585206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5585207,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,556,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,EESREHAB->EES::walking,luna,not stated,,not stated,,GSE184369:M14,M14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585207,,,train,hesrt,samples/GSE184369/GSM5585207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5585208,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,710,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,EESREHAB,luna,not stated,,not stated,,GSE184369:M7,M7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,shared_positions,human_visual_review,,,,36352232,,GSM5585208,,,train,hesrt,samples/GSE184369/GSM5585208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585209,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,695,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,EESREHAB,luna,not stated,,not stated,,GSE184369:M7,M7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585209,,,train,hesrt,samples/GSE184369/GSM5585209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM5585210,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,585,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,SCI->EES::walking,luna,not stated,,not stated,,GSE184369:M11,M11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585210,,,train,hesrt,samples/GSE184369/GSM5585210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5585211,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,573,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,EESREHAB->EES::walking,luna,not stated,,not stated,,GSE184369:M14,M14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,shared_positions,human_visual_review,,,,36352232,,GSM5585211,,,train,hesrt,samples/GSE184369/GSM5585211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5585212,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,642,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,EESREHAB->EES::walking,luna,not stated,,not stated,,GSE184369:M14,M14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585212,,,train,hesrt,samples/GSE184369/GSM5585212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5585214,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,696,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,SCI->EES::walking,luna,not stated,,not stated,,GSE184369:M11,M11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585214,,,train,hesrt,samples/GSE184369/GSM5585214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585215,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,550,The neurons that restore walking after paralysis [spatial transcriptomics],GSE184369,GSE184369+GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,SCI->EES::walking,luna,not stated,,not stated,,GSE184369:M12,M12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22127,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36352232,,GSM5585215,,,train,hesrt,samples/GSE184369/GSM5585215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5585213,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,711,The neurons that restore walking after paralysis,GSE184371,GSE184371,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002792,spinal cord,,luna,,wild type,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,22127,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36352232,,GSM5585213,,,train,sda-all,samples/GSE184371/GSM5585213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6439492,lung,disease,viral infectious disease,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1899,Epithelial Plasticity and Innate Immune Activation Promote Lung Tissue Remodeling following Respiratory Viral Infection.,GSE184384,GSE184384,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005108,luna,,14 days post infection with PR8,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.166666666666667,platform_constant,4.166666666666667,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37726288,,GSM6439492,,,train,hesrt,samples/GSE184384/GSM6439492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6585869,lung,disease,viral infectious disease,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2769,Epithelial Plasticity and Innate Immune Activation Promote Lung Tissue Remodeling following Respiratory Viral Infection.,GSE184384,GSE184384,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005108,luna,,31 days post infection with PR8,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.289999891420097,platform_constant,4.289999891420097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37726288,,GSM6585869,,,train,hesrt,samples/GSE184384/GSM6585869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5591748,brain,normal,,neocortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2466,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,GSE184510,GSE184510,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001950,brain,,luna,,,luna,not stated,,not stated,,GSE184510:2339,2339,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.36986301369863,platform_constant,1.36986301369863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37081484,,GSM5591748,,,train,hesrt,samples/GSE184510/GSM5591748,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM5591749,brain,normal,,neocortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3340,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,GSE184510,GSE184510,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001950,brain,,luna,,,luna,not stated,,not stated,,GSE184510:2248,2248,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.36986301369863,platform_constant,1.36986301369863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37081484,,GSM5591749,,,train,hesrt,samples/GSE184510/GSM5591749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591750,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2768,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,GSE184510,GSE184510,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,brain,,luna,,,luna,not stated,,not stated,,GSE184510:2339,2339,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.3370226636621492,platform_constant,1.3370226636621492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37081484,,GSM5591750,,,train,hesrt,samples/GSE184510/GSM5591750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591751,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2280,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,GSE184510,GSE184510,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,brain,,luna,,,luna,not stated,,not stated,,GSE184510:2248,2248,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.3370226636621492,platform_constant,1.3370226636621492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37081484,,GSM5591751,,,train,hesrt,samples/GSE184510/GSM5591751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591752,brain,not stated,,neocortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2485,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,GSE184510,GSE184510,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001950,brain,,luna,,,luna,not stated,,not stated,,GSE184510:2339,2339,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.36986301369863,platform_constant,1.36986301369863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37081484,,GSM5591752,,,train,hesrt,samples/GSE184510/GSM5591752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591753,brain,normal,,neocortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,undetermined,3349,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,GSE184510,GSE184510,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001950,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.181271889947339,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37081484,,GSM5591753,,,train,sda-all,samples/GSE184510/GSM5591753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.88, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591754,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,undetermined,2728,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,GSE184510,GSE184510,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.0359973086199625,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37081484,,GSM5591754,,,train,sda-all,samples/GSE184510/GSM5591754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5591755,brain,not stated,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2337,Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering,GSE184510,GSE184510,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,37081484,,GSM5591755,,,train,sda-all,samples/GSE184510/GSM5591755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6025935,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,29536,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM05,MBM05,,,release v3,sequencing-based,SlideSeqV2,,,bead,27854,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025935,,,train,sda-all,samples/GSE185386/GSM6025935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6025936,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,32228,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM05,MBM05,,,release v3,sequencing-based,SlideSeqV2,,,bead,29080,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025936,,,train,sda-all,samples/GSE185386/GSM6025936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6025937,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,6308,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM05,MBM05,,,release v3,sequencing-based,SlideSeqV2,,,bead,24992,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,near_duplicate_observations;shared_positions,VERIFIED,,,,35803246,,GSM6025937,,,train,sda-all,samples/GSE185386/GSM6025937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6025938,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,27072,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM06,MBM06,,,release v3,sequencing-based,SlideSeqV2,,,bead,29129,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025938,,,train,sda-all,samples/GSE185386/GSM6025938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6025939,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,38462,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM07,MBM07,,,release v3,sequencing-based,SlideSeqV2,,,bead,27648,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025939,,,train,sda-all,samples/GSE185386/GSM6025939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6025940,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,35054,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM08,MBM08,,,release v3,sequencing-based,SlideSeqV2,,,bead,28244,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025940,,,train,sda-all,samples/GSE185386/GSM6025940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6025941,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,27475,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM11,MBM11,,,release v3,sequencing-based,SlideSeqV2,,,bead,28751,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025941,,,train,sda-all,samples/GSE185386/GSM6025941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6025942,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,39049,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM11,MBM11,,,release v3,sequencing-based,SlideSeqV2,,,bead,30314,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025942,,,train,sda-all,samples/GSE185386/GSM6025942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6025943,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,9628,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM11,MBM11,,,release v3,sequencing-based,SlideSeqV2,,,bead,27158,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,near_duplicate_observations;shared_positions,VERIFIED,,,,35803246,,GSM6025943,,,train,sda-all,samples/GSE185386/GSM6025943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6025944,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,32657,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM13,MBM13,,,release v3,sequencing-based,SlideSeqV2,,,bead,26681,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025944,,,train,sda-all,samples/GSE185386/GSM6025944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6025945,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,38423,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Melanoma brain metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MBM18,MBM18,,,release v3,sequencing-based,SlideSeqV2,,,bead,27746,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025945,,,train,sda-all,samples/GSE185386/GSM6025945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6025946,other,disease,melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,27325,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Melanoma subcutaneous metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MPM01,MPM01,,,release v3,sequencing-based,SlideSeqV2,,,bead,24710,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025946,,,train,sda-all,samples/GSE185386/GSM6025946,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6025947,other,disease,melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,24150,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Melanoma subcutaneous metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MPM01,MPM01,,,release v3,sequencing-based,SlideSeqV2,,,bead,25036,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025947,,,train,sda-all,samples/GSE185386/GSM6025947,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6025948,other,disease,melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,25461,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Melanoma subcutaneous metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MPM06,MPM06,,,release v3,sequencing-based,SlideSeqV2,,,bead,25850,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025948,,,train,sda-all,samples/GSE185386/GSM6025948,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6025950,other,disease,melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,37363,Melanoma Brain Metastasis Atlas,GSE185386,GSE185386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Melanoma subcutaneous metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE185386:MPM10,MPM10,,,release v3,sequencing-based,SlideSeqV2,,,bead,28763,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,35803246,,GSM6025950,,,train,sda-all,samples/GSE185386/GSM6025950,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM5616008,liver,normal,,caudate lobe of liver,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E-like (heuristic),2265,"Single-Cell, Single-Nucleus and Spatial RNA Sequencing of the Human Liver Identifies Hepatic Stellate Cell and Cholangiocyte Heterogeneity",GSE185477,GSE185477,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001117,Liver Caudate Lobe,,luna,,,luna,adult,30-60,extracted field,M,,,,,release v3,sequencing-based,VISIUM,,,spot,36601,counts,um,1.0,verified,3.940820702246848,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,34792289,,CG-2da6052440ad,cross_gse_redeposit,GSM7697871,train,sda-all,samples/GSE185477/GSM5616008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5621965,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,413,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney organoid,,luna,,PFA fixed,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.17391199146183467,platform_constant,0.5000046852289655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621965,,,train,hesrt,samples/GSE185715/GSM5621965,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.71, ""life_stage"": 0.98}",,
GSM5621966,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,475,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney organoid,,luna,,PFA fixed,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.1736100645643971,platform_constant,0.4999936965132497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621966,,,train,hesrt,samples/GSE185715/GSM5621966,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.45, ""life_stage"": 0.99}",disease_status;uberon,low_confidence_annotation
GSM5621967,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,469,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney organoid,,luna,,PFA fixed,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.17211678464535718,platform_constant,0.4999856907041432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621967,,,train,hesrt,samples/GSE185715/GSM5621967,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.71, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5621968,lung,normal,,lung,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,416,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung organoid,,luna,,PFA fixed,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.1721170395869191,platform_constant,0.5000015226020829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621968,,,train,hesrt,samples/GSE185715/GSM5621968,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5621969,lung,normal,,lung,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,444,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung organoid,,luna,,PFA fixed,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.17271157167530224,platform_constant,0.49998991955807337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621969,,,train,hesrt,samples/GSE185715/GSM5621969,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM5621970,lung,normal,,lung,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,439,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung organoid,,luna,,PFA fixed,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.1724137931034483,platform_constant,0.50000945078347,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621970,,,train,hesrt,samples/GSE185715/GSM5621970,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.92, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM5621971,lung,normal,,lung,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,533,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung organoid,,luna,,PFA fixed,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.1724135368409502,platform_constant,0.5000087076081786,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621971,,,train,hesrt,samples/GSE185715/GSM5621971,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5621972,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2536,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,hippocampus,,luna,,FFPE,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.1721170395869191,platform_constant,0.5000015226020829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621972,,,train,hesrt,samples/GSE185715/GSM5621972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5621973,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2399,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,hippocampus,,luna,,FFPE,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.1721170395869191,platform_constant,0.49998643128928244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621973,,,train,hesrt,samples/GSE185715/GSM5621973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5621974,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2554,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,hippocampus,,luna,,FFPE,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.1721170395869191,platform_constant,0.49998643128928244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621974,,,train,hesrt,samples/GSE185715/GSM5621974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5621975,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2502,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,hippocampus,,luna,,FFPE,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.17391304347826086,platform_constant,0.5000077098228283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621975,,,train,hesrt,samples/GSE185715/GSM5621975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.84, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5621976,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2216,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,hippocampus,,luna,,FFPE,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.1721170395869191,platform_constant,0.49998643128928244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621976,,,train,hesrt,samples/GSE185715/GSM5621976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.84, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5621977,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3105,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,hippocampus,,luna,,FFPE,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.1721170395869191,platform_constant,0.5000015226020829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621977,,,train,hesrt,samples/GSE185715/GSM5621977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5621978,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3047,Genome-wide Spatial Expression Profiling in Formalin-fixed Tissues,GSE185715,GSE185715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,hippocampus,,luna,,FFPE,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.1721170395869191,platform_constant,0.5000015226020829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36776149,,GSM5621978,,,train,hesrt,samples/GSE185715/GSM5621978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.88, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5631821,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,male,Other,Pixel-seq,False,,20234,Polony gels enable amplifiable DNA stamping and spatial transcriptomics of chronic pain,GSE186097,GSE186097,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Mouse brain Olfactory bulb,,luna,,Wild-type,luna,not stated,,sample text,,,,,,release v3,sequencing-based,other,,,cell,32711,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36368323,,GSM5631821,,,train,sda-all,samples/GSE186097/GSM5631821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5631822,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Other,Pixel-seq,False,,29911,Polony gels enable amplifiable DNA stamping and spatial transcriptomics of chronic pain,GSE186097,GSE186097,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Mouse brain PBN region,,luna,,Wild-type,luna,not stated,,sample text,,,,,,release v3,sequencing-based,other,,,cell,30883,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36368323,,GSM5631822,,,train,sda-all,samples/GSE186097/GSM5631822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5643203,stomach,disease,gastric cancer,stomach,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2429,Spatial transcriptome analysis of gastric cancer which GAN-KP transplanted C57BL/6J mouse,GSE186290,GSE186290,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000945,GAN-KP tumor,MONDO:0001056,luna,gastric cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,31054,counts,um,1.0,verified,4.875407793576616,DEPOSITED_PIXEL_FRAME,,,,,VERIFIED,,,,34931404,,GSM5643203,,,train,sda-all,samples/GSE186290/GSM5643203,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5661565,brain,normal,,brain,primary tissue,Takifugu alboplumbeus,komon-damashi,not stated,male,Visium,Visium,True,H&E,3095,Spatial transcriptome analysis of brain region in grass puffer (Takifugu alboplumbeus),GSE186818,GSE186818,433688,Takifugu alboplumbeus,433688,,False,False,GEO organism field,Takifugu alboplumbeus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26886,counts,pixel,4.283860198380393,platform_constant,4.283860198380393,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36306789,,GSM5661565,,,train,hesrt,samples/GSE186818/GSM5661565,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5673398,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,841,Spatial transcriptomics of the ageing ovary,GSE188257,GSE188257,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,Ovary,,luna,,young and aged,luna,adult,3-4 months and 15-16 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,13.507416082123992,platform_constant,13.507416082123992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35996587,,GSM5673398,,,train,hesrt,samples/GSE188257/GSM5673398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM5673399,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1415,Spatial transcriptomics of the ageing ovary,GSE188257,GSE188257,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,Ovary,,luna,,young and aged,luna,adult,3-4 months and 15-16 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,14.029939859788387,platform_constant,14.029939859788387,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35996587,,GSM5673399,,,train,hesrt,samples/GSE188257/GSM5673399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM5673400,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,814,Spatial transcriptomics of the ageing ovary,GSE188257,GSE188257,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,Ovary,,luna,,young and aged,luna,adult,3-4 months and 15-16 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,13.815453883061046,platform_constant,13.815453883061046,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35996587,,GSM5673400,,,train,hesrt,samples/GSE188257/GSM5673400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM5673401,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1193,Spatial transcriptomics of the ageing ovary,GSE188257,GSE188257,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,Ovary,,luna,,young and aged,luna,adult,3-4 months and 15-16 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,13.49587379751724,platform_constant,13.49587379751724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35996587,,GSM5673401,,,train,hesrt,samples/GSE188257/GSM5673401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM5691526,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,959,"Characterizing Neonatal Heart Maturation, Regeneration, and Scar Resolution Using Spatial Transcriptomics [spatial]",GSE188888,GSE188888,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,P2 apical resection + 3 days,age rule: postnatal day,neonatal or infant,5 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35050211,,GSM5691526,,,val,hesrt,samples/GSE188888/GSM5691526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5691527,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1374,"Characterizing Neonatal Heart Maturation, Regeneration, and Scar Resolution Using Spatial Transcriptomics [spatial]",GSE188888,GSE188888,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,P2 apical resection + 7 days,age rule: postnatal day,neonatal or infant,10 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35050211,,GSM5691527,,,val,hesrt,samples/GSE188888/GSM5691527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5691528,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1722,"Characterizing Neonatal Heart Maturation, Regeneration, and Scar Resolution Using Spatial Transcriptomics [spatial]",GSE188888,GSE188888,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,P2 apical resection + 14 days,age rule: postnatal day,neonatal or infant,17 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35050211,,GSM5691528,,,val,hesrt,samples/GSE188888/GSM5691528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5691529,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2095,"Characterizing Neonatal Heart Maturation, Regeneration, and Scar Resolution Using Spatial Transcriptomics [spatial]",GSE188888,GSE188888,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,P2 apical resection + 21 days,age rule: postnatal day,juvenile,24 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35050211,,GSM5691529,,,val,hesrt,samples/GSE188888/GSM5691529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5693665,lymph node,disease,luminal B breast carcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4346,Spatial transcriptome analysis reveals the lymph node atlas of breast cancer metastases,GSE189042,GSE189042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,lymph node,MONDO:0021115,luna,breast cancer,untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.135948388188244,platform_constant,4.135948388188244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM5693665,,,train,hesrt,samples/GSE189042/GSM5693665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695828,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2249,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005101,luna,Ulcerative Colitis,Inflamed,age rule: bare number read as years,adult,33,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.44444005493471417,platform_constant,0.5000022964684199,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695828,,,train,hesrt,samples/GSE189184/GSM5695828,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695829,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2575,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005101,luna,Ulcerative Colitis,Inflamed,age rule: bare number read as years,adult,53,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.44444005493471417,platform_constant,0.5000022964684199,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695829,,,train,hesrt,samples/GSE189184/GSM5695829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695830,colon,disease,colitis,colon,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1225,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005292,luna,Checkpoint inhibitor induced colitis,Inflamed,age rule: bare number read as years,adult,47,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.4464241228685168,platform_constant,0.4999880725301246,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695830,,,train,hesrt,samples/GSE189184/GSM5695830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695831,colon,disease,colitis,colon,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1207,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005292,luna,Checkpoint inhibitor induced colitis,Inflamed,age rule: bare number read as years,aged,72,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.4464241228685168,platform_constant,0.4999880725301246,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695831,,,train,hesrt,samples/GSE189184/GSM5695831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM5695832,colon,disease,colitis,colon,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1837,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005292,luna,Checkpoint inhibitor induced colitis,Inflamed,age rule: bare number read as years,aged,74,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.9038399867637336,platform_constant,0.9038399867637336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695832,,,train,hesrt,samples/GSE189184/GSM5695832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5695833,colon,disease,colitis,colon,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,494,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005292,luna,Checkpoint inhibitor induced colitis,Inflamed,age rule: bare number read as years,aged,74,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.9038399867637336,platform_constant,0.9038399867637336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695833,,,train,hesrt,samples/GSE189184/GSM5695833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5695834,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2378,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005101,luna,Ulcerative Colitis,Inflamed,age rule: bare number read as years,adult,30,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.9038399867637336,platform_constant,0.9038399867637336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695834,,,train,hesrt,samples/GSE189184/GSM5695834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695835,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2081,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005101,luna,Ulcerative Colitis,Inflamed,age rule: bare number read as years,adult,30,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.9038399867637336,platform_constant,0.9038399867637336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695835,,,train,hesrt,samples/GSE189184/GSM5695835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695836,colon,disease,colitis,colon,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1760,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005292,luna,Checkpoint inhibitor induced colitis,Inflamed,age rule: bare number read as years,adult,30,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.4424778761061947,platform_constant,0.4999992340698008,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695836,,,train,hesrt,samples/GSE189184/GSM5695836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5695837,colon,normal,,colon,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1965,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,,luna,Healthy Control,Not inflamed,age rule: bare number read as years,aged,66,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.4424778761061947,platform_constant,0.4999867578232889,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695837,,,train,hesrt,samples/GSE189184/GSM5695837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM5695838,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1187,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005101,luna,Ulcerative Colitis,Inflamed,age rule: bare number read as years,adult,55,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.4424778761061947,platform_constant,0.5000137826737198,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695838,,,train,hesrt,samples/GSE189184/GSM5695838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695839,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1055,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005101,luna,Ulcerative Colitis,Inflamed,age rule: bare number read as years,adult,60,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.4424778761061947,platform_constant,0.4999891946794602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695839,,,train,hesrt,samples/GSE189184/GSM5695839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695840,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1464,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005101,luna,Ulcerative Colitis,Inflamed,age rule: bare number read as years,aged,65,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.5208333333333334,platform_constant,0.5208333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695840,,,train,hesrt,samples/GSE189184/GSM5695840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5695841,colon,disease,colitis,colon,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1408,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005292,luna,Checkpoint inhibitor induced colitis,Inflamed,age rule: bare number read as years,aged,75,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.5208333333333334,platform_constant,0.5208333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695841,,,train,hesrt,samples/GSE189184/GSM5695841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5695842,colon,disease,colitis,colon,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1743,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005292,luna,Checkpoint inhibitor induced colitis,Inflamed,age rule: bare number read as years,adult,46,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.5208333333333334,platform_constant,0.5208333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695842,,,train,hesrt,samples/GSE189184/GSM5695842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5695843,colon,normal,,colon,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1745,Divergent spatial microdomains drive inflammation and repair in Ulcerative and Immune Checkpoint Therapy Colitis - Spatial Transcriptomics,GSE189184,GSE189184+GSE189185,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,,luna,Healthy Control,Not inflamed,age rule: bare number read as years,adult,41,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.5208333333333334,platform_constant,0.5208333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744246,,GSM5695843,,,train,hesrt,samples/GSE189184/GSM5695843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5702473,lung,disease,lung adenocarcinoma;invasive carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,False,,4095,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],GSE189487,GSE189487,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung adenocarcinoma,MONDO:0005061;MONDO:0040677,luna,,,luna,not stated,,extracted field,Female,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36434043,,GSM5702473,,,train,sda-all,samples/GSE189487/GSM5702473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5702474,lung,disease,lung adenocarcinoma;invasive carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,False,,4416,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],GSE189487,GSE189487,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung adenocarcinoma,MONDO:0005061;MONDO:0040677,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36434043,,GSM5702474,,,train,sda-all,samples/GSE189487/GSM5702474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5702475,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,False,,1140,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],GSE189487,GSE189487,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung adenocarcinoma,MONDO:0005061,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36434043,,GSM5702475,,,train,sda-all,samples/GSE189487/GSM5702475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5702476,lung,disease,adenocarcinoma in situ;lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,False,,1700,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],GSE189487,GSE189487,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung adenocarcinoma,MONDO:0003218;MONDO:0005061,luna,,,luna,not stated,,extracted field,Female,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36434043,,GSM5702476,,,train,sda-all,samples/GSE189487/GSM5702476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM5702477,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,False,,3911,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],GSE189487,GSE189487,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung adenocarcinoma,MONDO:0005061,luna,,,luna,not stated,,extracted field,Female,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36434043,,GSM5702477,,,train,sda-all,samples/GSE189487/GSM5702477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5702478,lung,disease,adenocarcinoma in situ;lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,False,,1760,Spatiotemporal transcriptional atlas of lung adenocarcinoma from adenocarcinoma in situ to invasive carcinoma [ST],GSE189487,GSE189487,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung adenocarcinoma,MONDO:0003218;MONDO:0005061,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36434043,,GSM5702478,,,train,sda-all,samples/GSE189487/GSM5702478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713333,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,35613,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21055,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713333,,,train,sda-all,samples/GSE190094/GSM5713333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713334,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,30182,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19867,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713334,,,train,sda-all,samples/GSE190094/GSM5713334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713335,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,34907,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20738,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713335,,,train,sda-all,samples/GSE190094/GSM5713335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713336,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,27407,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19802,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713336,,,train,sda-all,samples/GSE190094/GSM5713336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713337,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,15634,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19367,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713337,,,train,sda-all,samples/GSE190094/GSM5713337,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713338,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,27767,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,18411,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713338,,,train,sda-all,samples/GSE190094/GSM5713338,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM5713339,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,27935,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,18818,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713339,,,train,sda-all,samples/GSE190094/GSM5713339,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713340,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,20072,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,18154,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713340,,,train,sda-all,samples/GSE190094/GSM5713340,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713341,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,19945,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21324,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713341,,,train,sda-all,samples/GSE190094/GSM5713341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713342,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,26502,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21874,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713342,,,train,sda-all,samples/GSE190094/GSM5713342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713343,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,21527,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20056,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713343,,,train,sda-all,samples/GSE190094/GSM5713343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713344,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,24490,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19585,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713344,,,train,sda-all,samples/GSE190094/GSM5713344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713345,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,18928,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,17992,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713345,,,train,sda-all,samples/GSE190094/GSM5713345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713346,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,16124,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19023,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713346,,,train,sda-all,samples/GSE190094/GSM5713346,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713347,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,25441,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22075,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713347,,,train,sda-all,samples/GSE190094/GSM5713347,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713348,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,30535,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22435,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713348,,,train,sda-all,samples/GSE190094/GSM5713348,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713349,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,34427,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22122,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713349,,,train,sda-all,samples/GSE190094/GSM5713349,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713350,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,37848,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22728,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713350,,,train,sda-all,samples/GSE190094/GSM5713350,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713351,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,30432,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21816,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713351,,,train,sda-all,samples/GSE190094/GSM5713351,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713352,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,29924,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21386,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713352,,,train,sda-all,samples/GSE190094/GSM5713352,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713353,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,35501,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21891,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713353,,,train,sda-all,samples/GSE190094/GSM5713353,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713354,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,38129,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22718,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713354,,,train,sda-all,samples/GSE190094/GSM5713354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713355,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,31875,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22259,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713355,,,train,sda-all,samples/GSE190094/GSM5713355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713356,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,38554,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21781,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713356,,,train,sda-all,samples/GSE190094/GSM5713356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713357,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,40130,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21623,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713357,,,train,sda-all,samples/GSE190094/GSM5713357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713358,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,40950,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22767,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713358,,,train,sda-all,samples/GSE190094/GSM5713358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713359,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,30874,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19228,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713359,,,train,sda-all,samples/GSE190094/GSM5713359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713360,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,32562,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21777,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713360,,,train,sda-all,samples/GSE190094/GSM5713360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713361,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,43264,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21872,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713361,,,train,sda-all,samples/GSE190094/GSM5713361,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM5713362,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,41857,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22088,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713362,,,train,sda-all,samples/GSE190094/GSM5713362,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5713363,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,37660,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20228,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713363,,,train,sda-all,samples/GSE190094/GSM5713363,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713364,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,38745,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21726,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713364,,,train,sda-all,samples/GSE190094/GSM5713364,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713365,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,38535,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21457,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713365,,,train,sda-all,samples/GSE190094/GSM5713365,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713366,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,27708,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20723,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713366,,,train,sda-all,samples/GSE190094/GSM5713366,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713367,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,39655,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20988,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713367,,,train,sda-all,samples/GSE190094/GSM5713367,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713368,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,22776,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19735,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713368,,,train,sda-all,samples/GSE190094/GSM5713368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713369,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,29217,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20478,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713369,,,train,sda-all,samples/GSE190094/GSM5713369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713370,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,36011,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21395,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713370,,,train,sda-all,samples/GSE190094/GSM5713370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713371,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,21608,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20669,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713371,,,train,sda-all,samples/GSE190094/GSM5713371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713372,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,33949,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20831,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713372,,,train,sda-all,samples/GSE190094/GSM5713372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713373,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,26711,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,BTBR-wt/wt,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20316,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713373,,,train,sda-all,samples/GSE190094/GSM5713373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713374,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,35753,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21090,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713374,,,train,sda-all,samples/GSE190094/GSM5713374,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5713375,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,24140,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20750,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713375,,,train,sda-all,samples/GSE190094/GSM5713375,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5713376,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,16688,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19665,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713376,,,train,sda-all,samples/GSE190094/GSM5713376,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM5713377,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,30625,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20904,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713377,,,train,sda-all,samples/GSE190094/GSM5713377,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713378,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,18711,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20596,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713378,,,train,sda-all,samples/GSE190094/GSM5713378,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713379,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,20202,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,18654,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713379,,,train,sda-all,samples/GSE190094/GSM5713379,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713380,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,29749,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,MONDO:0005016;MONDO:0005015,luna,early diabetic kidney disease,BTBR-ob/ob,age rule: age with unit,adult,13 week,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20567,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713380,,,train,sda-all,samples/GSE190094/GSM5713380,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713381,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,38076,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22095,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713381,,,train,sda-all,samples/GSE190094/GSM5713381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713382,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,25839,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20773,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713382,,,train,sda-all,samples/GSE190094/GSM5713382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713383,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,38528,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21439,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713383,,,train,sda-all,samples/GSE190094/GSM5713383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713384,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,40045,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21804,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713384,,,train,sda-all,samples/GSE190094/GSM5713384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713385,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,37805,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21263,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713385,,,train,sda-all,samples/GSE190094/GSM5713385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713386,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,25579,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21331,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713386,,,train,sda-all,samples/GSE190094/GSM5713386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5713387,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,26078,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22256,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713387,,,train,sda-all,samples/GSE190094/GSM5713387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713388,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,28788,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21986,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713388,,,train,sda-all,samples/GSE190094/GSM5713388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5713389,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,33116,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22025,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713389,,,train,sda-all,samples/GSE190094/GSM5713389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713390,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,32317,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22209,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713390,,,train,sda-all,samples/GSE190094/GSM5713390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5713391,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,35855,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21180,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713391,,,train,sda-all,samples/GSE190094/GSM5713391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5713392,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,29746,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21104,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713392,,,train,sda-all,samples/GSE190094/GSM5713392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713393,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,19069,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19758,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713393,,,train,sda-all,samples/GSE190094/GSM5713393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713394,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,30582,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,18792,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713394,,,train,sda-all,samples/GSE190094/GSM5713394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713395,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,30206,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22274,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713395,,,train,sda-all,samples/GSE190094/GSM5713395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713396,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,34945,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21599,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713396,,,train,sda-all,samples/GSE190094/GSM5713396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713397,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,35117,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21820,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713397,,,train,sda-all,samples/GSE190094/GSM5713397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5713398,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,29528,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,22026,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713398,,,train,sda-all,samples/GSE190094/GSM5713398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713399,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,31057,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20814,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713399,,,train,sda-all,samples/GSE190094/GSM5713399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5713400,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,26260,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21520,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713400,,,train,sda-all,samples/GSE190094/GSM5713400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5713401,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,20320,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19858,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713401,,,train,sda-all,samples/GSE190094/GSM5713401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713402,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,21894,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,control,UMOD-WT/WT,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20113,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713402,,,train,sda-all,samples/GSE190094/GSM5713402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713403,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,18898,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20652,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713403,,,train,sda-all,samples/GSE190094/GSM5713403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713404,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,17363,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19852,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713404,,,train,sda-all,samples/GSE190094/GSM5713404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5713405,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,19886,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20794,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713405,,,train,sda-all,samples/GSE190094/GSM5713405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5713406,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,14666,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,19839,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713406,,,train,sda-all,samples/GSE190094/GSM5713406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713407,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,12132,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20156,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713407,,,train,sda-all,samples/GSE190094/GSM5713407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5713408,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,11031,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21796,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713408,,,train,sda-all,samples/GSE190094/GSM5713408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5713409,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,18162,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20720,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713409,,,train,sda-all,samples/GSE190094/GSM5713409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5713410,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,16818,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20997,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713410,,,train,sda-all,samples/GSE190094/GSM5713410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5713411,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,12541,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20854,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713411,,,train,sda-all,samples/GSE190094/GSM5713411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5713412,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,12533,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20620,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713412,,,train,sda-all,samples/GSE190094/GSM5713412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5713413,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,22430,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21247,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713413,,,train,sda-all,samples/GSE190094/GSM5713413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5713414,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,11005,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,21292,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713414,,,train,sda-all,samples/GSE190094/GSM5713414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5713415,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,28577,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20935,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713415,,,train,sda-all,samples/GSE190094/GSM5713415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5713416,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,20424,High Resolution Slide-seqV2 Spatial Transcriptomics Enables Discovery of Disease-Specific Cell Neighborhoods and Pathways,GSE190094,GSE190094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney cross-section,,luna,autosomal dominant tubulointersital kidney disease (ADTKD),UMOD-KI/KI,age rule: age with unit,adult,6 month,not stated,,,,,,release v3,sequencing-based,Slide-seqV2,,,bead,20226,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,35372810,,GSM5713416,,,train,sda-all,samples/GSE190094/GSM5713416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5726156,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3934,10X Visium Spatial transcriptomics of murine colon at d14 (mucosa healing) in B cell sufficient/deficient mice,GSE190595,GSE190595,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,control,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.9748793052273198,platform_constant,0.9748793052273198,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35149721,,GSM5726156,,,train,hesrt,samples/GSE190595/GSM5726156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5726157,colon,perturbation,,colon,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3547,10X Visium Spatial transcriptomics of murine colon at d14 (mucosa healing) in B cell sufficient/deficient mice,GSE190595,GSE190595,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,B cell depleted,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.9748793052273198,platform_constant,0.9748793052273198,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35149721,,GSM5726157,,,train,hesrt,samples/GSE190595/GSM5726157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5732357,lymph node,disease,invasive ductal breast carcinoma;lymph node neoplasm,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3055,Single cell profiling of primary and paired metastatic lymph node tumors in breast cancer patients (10x Visium),GSE190811,GSE190811+GSE190870,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,human breast cancer,MONDO:0004953;MONDO:0024339,luna,Invasive ductal carcinoma,Lymph node metastasis,luna,not stated,,not stated,,GSE190811:Patient_3,Patient_3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33931,counts,pixel,0.27396848990154254,platform_constant,0.49999332700382454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36357424,,GSM5732357,,,train,hesrt,samples/GSE190811/GSM5732357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5732358,lymph node,disease,invasive ductal breast carcinoma;lymph node neoplasm,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4454,Single cell profiling of primary and paired metastatic lymph node tumors in breast cancer patients (10x Visium),GSE190811,GSE190811+GSE190870,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,human breast cancer,MONDO:0004953;MONDO:0024339,luna,Invasive ductal carcinoma,Lymph node metastasis,luna,not stated,,not stated,,GSE190811:Patient_6,Patient_6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33931,counts,pixel,0.2739715745128152,platform_constant,0.4999964352213171,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36357424,,GSM5732358,,,train,hesrt,samples/GSE190811/GSM5732358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5732359,lymph node,disease,invasive ductal breast carcinoma;lymph node neoplasm,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4859,Single cell profiling of primary and paired metastatic lymph node tumors in breast cancer patients (10x Visium),GSE190811,GSE190811+GSE190870,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,human breast cancer,MONDO:0004953;MONDO:0024339,luna,Invasive ductal carcinoma,Lymph node metastasis,luna,not stated,,not stated,,GSE190811:Patient_7,Patient_7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33931,counts,pixel,0.2739715745128152,platform_constant,0.49999895642877507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36357424,,GSM5732359,,,train,hesrt,samples/GSE190811/GSM5732359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5732360,lymph node,disease,invasive ductal breast carcinoma;lymph node neoplasm,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4553,Single cell profiling of primary and paired metastatic lymph node tumors in breast cancer patients (10x Visium),GSE190811,GSE190811+GSE190870,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,human breast cancer,MONDO:0004953;MONDO:0024339,luna,Invasive ductal carcinoma,Lymph node metastasis,luna,not stated,,not stated,,GSE190811:Patient_8,Patient_8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33931,counts,pixel,0.273972602739726,platform_constant,0.5000061650000617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36357424,,GSM5732360,,,train,hesrt,samples/GSE190811/GSM5732360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5733935,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1498,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,GSE190910,GSE190910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord tissue,MONDO:0043797,luna,,SCI/Rostral/cross sections/7&14dpi,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,4.0574300753522206,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733935,,,train,sda-all,samples/GSE190910/GSM5733935,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5733936,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2005,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,GSE190910,GSE190910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord tissue,MONDO:0043797,luna,,SCI/Central/coronal sections/7dpi,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,3.9755072576914263,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733936,,,train,sda-all,samples/GSE190910/GSM5733936,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5733937,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1540,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,GSE190910,GSE190910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord tissue,MONDO:0043797,luna,,SCI/Central/cross sections/7&14dpi,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,3.9528855539986267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733937,,,train,sda-all,samples/GSE190910/GSM5733937,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5733938,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1514,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,GSE190910,GSE190910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord tissue,MONDO:0043797,luna,,SCI/Caudal/cross sections/7&14dpi,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,4.003624312490957,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733938,,,train,sda-all,samples/GSE190910/GSM5733938,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5733939,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2170,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,GSE190910,GSE190910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord tissue,MONDO:0043797,luna,,SCI/Central/coronal sections/14dpi,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,3.9881687083989026,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733939,,,train,sda-all,samples/GSE190910/GSM5733939,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5733940,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),756,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,GSE190910,GSE190910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord tissue,,luna,,Sham/Central/cross sections/Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,3.9642196370803706,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733940,,,train,sda-all,samples/GSE190910/GSM5733940,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5733941,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1380,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,GSE190910,GSE190910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord tissue,,luna,,Sham/Central/coronal & cross sections/Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,3.9882032200994995,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733941,,,train,sda-all,samples/GSE190910/GSM5733941,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5733942,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2650,Fibroblasts orchestrate the pathogenesis of fibrotic and glial scar in spinal cord injury,GSE190910,GSE190910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord tissue,MONDO:0043797,luna,,SCI/Central/coronal sections/7&14dpi,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,4.050420353701036,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM5733942,,,train,sda-all,samples/GSE190910/GSM5733942,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6657936,other,disease,melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,33760,"Multi-modal single-cell and whole-genome sequencing of minute, frozen specimens to propel clinical applications",GSE192402,GSE192402,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Melanoma subcutaneous metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE192402:ribas,ribas,,,release v3,sequencing-based,SlideSeqV2,,,bead,27987,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,36624340,,GSM6657936,,,train,sda-all,samples/GSE192402/GSM6657936,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6657937,other,disease,melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,15051,"Multi-modal single-cell and whole-genome sequencing of minute, frozen specimens to propel clinical applications",GSE192402,GSE192402,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Melanoma subcutaneous metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE192402:ribas,ribas,,,release v3,sequencing-based,SlideSeqV2,,,bead,25531,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,36624340,,GSM6657937,,,train,sda-all,samples/GSE192402/GSM6657937,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM5747437,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,774,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P02,P02,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747437,,,val,sda-all,samples/GSE192460/GSM5747437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747438,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,999,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P03,P03,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747438,,,val,sda-all,samples/GSE192460/GSM5747438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747439,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1026,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P05,P05,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747439,,,val,sda-all,samples/GSE192460/GSM5747439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747440,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,765,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P08,P08,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747440,,,val,sda-all,samples/GSE192460/GSM5747440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747441,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,736,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P02,P02,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747441,,,val,sda-all,samples/GSE192460/GSM5747441,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747442,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,554,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P01,P01,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747442,,,val,sda-all,samples/GSE192460/GSM5747442,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747443,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,844,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P01,P01,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747443,,,val,sda-all,samples/GSE192460/GSM5747443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747444,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,609,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P03,P03,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747444,,,val,sda-all,samples/GSE192460/GSM5747444,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747445,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,306,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P04,P04,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747445,,,val,sda-all,samples/GSE192460/GSM5747445,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747446,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,441,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P04,P04,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747446,,,val,sda-all,samples/GSE192460/GSM5747446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747447,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,628,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P04,P04,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747447,,,val,sda-all,samples/GSE192460/GSM5747447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747448,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,240,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P06,P06,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747448,,,val,sda-all,samples/GSE192460/GSM5747448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747449,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,974,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P07,P07,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747449,,,val,sda-all,samples/GSE192460/GSM5747449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM5747450,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1067,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P08,P08,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747450,,,val,sda-all,samples/GSE192460/GSM5747450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747451,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1047,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P10,P10,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747451,,,val,sda-all,samples/GSE192460/GSM5747451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747452,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,438,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P10,P10,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747452,,,val,sda-all,samples/GSE192460/GSM5747452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747453,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,698,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P11,P11,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747453,,,val,sda-all,samples/GSE192460/GSM5747453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747454,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,545,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P12,P12,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747454,,,val,sda-all,samples/GSE192460/GSM5747454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM5747455,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,58,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P12,P12,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747455,,,val,sda-all,samples/GSE192460/GSM5747455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747456,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,705,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P13,P13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747456,,,val,sda-all,samples/GSE192460/GSM5747456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5747457,skin,disease,sarcoidosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,667,Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data],GSE192460,GSE192460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,MONDO:0019338,luna,,,luna,not stated,,not stated,,GSE192460:P13,P13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36750099,,GSM5747457,,,val,sda-all,samples/GSE192460/GSM5747457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5764414,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1646,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,StSt,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.9071244386756785,platform_constant,4.9071244386756785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764414,,,train,hesrt,samples/GSE192742/GSM5764414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764415,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1651,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,StSt,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.9071244386756785,platform_constant,4.9071244386756785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764415,,,train,hesrt,samples/GSE192742/GSM5764415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764416,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1604,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,StSt,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.651302314530204,platform_constant,4.651302314530204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764416,,,train,hesrt,samples/GSE192742/GSM5764416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764417,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2286,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,StSt,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.651302314530204,platform_constant,4.651302314530204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764417,,,train,hesrt,samples/GSE192742/GSM5764417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764418,liver,normal,,capsule of liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,438,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0016479,liver,,luna,,StSt,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.501062208462857,platform_constant,4.501062208462857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764418,,,train,hesrt,samples/GSE192742/GSM5764418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM5764419,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1279,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,SD,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.506371979570342,platform_constant,4.506371979570342,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764419,,,train,hesrt,samples/GSE192742/GSM5764419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5764420,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2348,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,WD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.500398394063028,platform_constant,4.500398394063028,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764420,,,train,hesrt,samples/GSE192742/GSM5764420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM5764421,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2076,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,WD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.51035391582303,platform_constant,4.51035391582303,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764421,,,train,hesrt,samples/GSE192742/GSM5764421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM5764422,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2254,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,WD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.498407210470884,platform_constant,4.498407210470884,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764422,,,train,hesrt,samples/GSE192742/GSM5764422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM5764423,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1708,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,StSt,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.5690265855903,platform_constant,4.5690265855903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764423,,,train,hesrt,samples/GSE192742/GSM5764423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764424,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1248,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,,Steatotic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32738,counts,pixel,4.497787751400223,platform_constant,4.497787751400223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764424,,,train,hesrt,samples/GSE192742/GSM5764424,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5764425,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,532,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,,Steatotic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32738,counts,pixel,4.4980088185324965,platform_constant,4.4980088185324965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764425,,,train,hesrt,samples/GSE192742/GSM5764425,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM5764426,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2501,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,,Healthy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32738,counts,pixel,4.575176396326853,platform_constant,4.575176396326853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764426,,,train,hesrt,samples/GSE192742/GSM5764426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5764427,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1185,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,,Steatotic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32738,counts,pixel,4.819864254554368,platform_constant,4.819864254554368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764427,,,train,hesrt,samples/GSE192742/GSM5764427,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM5764428,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1423,Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches,GSE192742,GSE192742,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,,Healthy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32738,counts,pixel,4.5046020402362315,platform_constant,4.5046020402362315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35021063;36304458,,GSM5764428,,,train,hesrt,samples/GSE192742/GSM5764428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5773453,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3259,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],GSE193107,GSE193107,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Young,age rule: age with unit,juvenile,2 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.5469464442041558,platform_constant,0.5469464442041558,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773453,,,train,hesrt,samples/GSE193107/GSM5773453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM5773454,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3593,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],GSE193107,GSE193107,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Young,age rule: age with unit,adult,2 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.546448087431694,platform_constant,0.546448087431694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773454,,,train,hesrt,samples/GSE193107/GSM5773454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM5773455,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3400,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],GSE193107,GSE193107,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Young,age rule: age with unit,not stated,2 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.5469464442041558,platform_constant,0.5469464442041558,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773455,,,train,hesrt,samples/GSE193107/GSM5773455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.86, ""life_stage"": 0.28}",life_stage,low_confidence_annotation
GSM5773456,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3294,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],GSE193107,GSE193107,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Young,age rule: age with unit,not stated,2 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.546448087431694,platform_constant,0.546448087431694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773456,,,train,hesrt,samples/GSE193107/GSM5773456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 0.32}",life_stage,low_confidence_annotation
GSM5773457,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,3681,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],GSE193107,GSE193107,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Old,age rule: age with unit,aged,28 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.5469464442041558,platform_constant,0.5469464442041558,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773457,,,train,hesrt,samples/GSE193107/GSM5773457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5773458,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,3543,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],GSE193107,GSE193107,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Old,age rule: age with unit,aged,28 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.546448087431694,platform_constant,0.546448087431694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773458,,,train,hesrt,samples/GSE193107/GSM5773458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5773459,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,3269,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],GSE193107,GSE193107,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Old,age rule: age with unit,aged,28 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.5469464442041558,platform_constant,0.5469464442041558,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773459,,,train,hesrt,samples/GSE193107/GSM5773459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5773460,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,3050,Spatial transcriptomic profiling of the aging mouse brain [spatial scRNA-seq],GSE193107,GSE193107,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Old,age rule: age with unit,aged,28 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.546448087431694,platform_constant,0.546448087431694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38372175,,GSM5773460,,,train,hesrt,samples/GSE193107/GSM5773460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM5808054,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,False,,1906,Perturb-map coupled with spatial transcriptomics identifies mutation associated gene signatures in a mouse model of lung adenocarcinoma,GSE193460,GSE193460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,WT-Cas9,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32289,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,35290801,,GSM5808054,,,train,sda-all,samples/GSE193460/GSM5808054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5808055,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,undetermined,1931,Perturb-map coupled with spatial transcriptomics identifies mutation associated gene signatures in a mouse model of lung adenocarcinoma,GSE193460,GSE193460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,WT-Cas9,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32289,counts,um,1.0,verified,4.610657745044323,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35290801,,GSM5808055,,,train,sda-all,samples/GSE193460/GSM5808055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5808056,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,undetermined,1244,Perturb-map coupled with spatial transcriptomics identifies mutation associated gene signatures in a mouse model of lung adenocarcinoma,GSE193460,GSE193460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,WT-Cas9,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32289,counts,um,1.0,verified,4.348513289147683,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35290801,,GSM5808056,,,train,sda-all,samples/GSE193460/GSM5808056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5808057,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,undetermined,2546,Perturb-map coupled with spatial transcriptomics identifies mutation associated gene signatures in a mouse model of lung adenocarcinoma,GSE193460,GSE193460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,WT-Cas9,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32289,counts,um,1.0,verified,4.62795215600362,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,35290801,,GSM5808057,,,train,sda-all,samples/GSE193460/GSM5808057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5833528,brain,disease,malignant glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4337,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0100342,luna,"Diffuse midline glioma, H3K27M-mutant",Recurrent,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.124077627558917,platform_constant,4.124077627558917,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833528,,,train,hesrt,samples/GSE194329/GSM5833528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833529,brain,disease,malignant glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2305,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0100342,luna,"Diffuse midline glioma, H3K27M-mutant",Primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8600119319307864,platform_constant,3.8600119319307864,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833529,,,train,hesrt,samples/GSE194329/GSM5833529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833530,brain,disease,malignant glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1063,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0100342,luna,"Diffuse midline glioma, H3K27M-mutant",Primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.028032315030445,platform_constant,4.028032315030445,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833530,,,train,hesrt,samples/GSE194329/GSM5833530,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5833531,brain,disease,malignant glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1056,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0100342,luna,"Diffuse midline glioma, H3K27M-mutant",Recurrent,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.010919648524724,platform_constant,4.010919648524724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833531,,,train,hesrt,samples/GSE194329/GSM5833531,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833532,brain,disease,malignant glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2128,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0100342,luna,"Diffuse midline glioma, H3K27M-mutant",Primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.011893855633693,platform_constant,4.011893855633693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833532,,,train,hesrt,samples/GSE194329/GSM5833532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833533,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4764,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,Secondary glioblastoma,Primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.137084733134966,platform_constant,4.137084733134966,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833533,,,train,hesrt,samples/GSE194329/GSM5833533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833534,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2891,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,"Glioblastoma, IDH-wt",Recurrent,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.174390192974844,platform_constant,4.174390192974844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833534,,,train,hesrt,samples/GSE194329/GSM5833534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833535,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1775,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,"Glioblastoma, IDH-wt",Primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.058433490987309,platform_constant,4.058433490987309,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833535,,,train,hesrt,samples/GSE194329/GSM5833535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833536,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2540,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,Secondary glioblastoma,Primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9456985618233245,platform_constant,3.9456985618233245,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833536,,,train,hesrt,samples/GSE194329/GSM5833536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833537,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2203,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,"Glioblastoma, IDH-wt",Primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9590050400519052,platform_constant,3.9590050400519052,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833537,,,train,hesrt,samples/GSE194329/GSM5833537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5833538,brain,disease,malignant glioma,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2171,Spatial multi-omics reveals vulnerabilities of radial glia-like cancer-initiating cells within distinct ecosystems of pediatric and adult malignant gliomas,GSE194329,GSE194329,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0100342,luna,,Peritumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9366665774224336,platform_constant,3.9366665774224336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36823172;40483536,,GSM5833538,,,train,hesrt,samples/GSE194329/GSM5833538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5833739,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3651,Excitatory SST neurons in the medial paralemniscal nucleus control repetitive self-grooming and encode reward,GSE194338,GSE194338,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,,age rule: postnatal day,adult,60 postnatal days,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,3.894000023519748,platform_constant,3.894000023519748,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM5833739,,,train,hesrt,samples/GSE194338/GSM5833739,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.84, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM7016921,liver,disease,hepatoblastoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1890,mousemodel_Heptablastoma spatial transcriptomics,GSE195575,GSE195575,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8928215559724615,platform_constant,0.8928215559724615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016921,,,test,hesrt,samples/GSE195575/GSM7016921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM7016922,liver,disease,hepatoblastoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3430,mousemodel_Heptablastoma spatial transcriptomics,GSE195575,GSE195575,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.9258862368658796,platform_constant,0.9258862368658796,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016922,,,test,hesrt,samples/GSE195575/GSM7016922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7016923,liver,disease,hepatoblastoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2396,mousemodel_Heptablastoma spatial transcriptomics,GSE195575,GSE195575,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8928571428571429,platform_constant,0.8928571428571429,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016923,,,test,hesrt,samples/GSE195575/GSM7016923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7016924,liver,disease,hepatoblastoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2408,mousemodel_Heptablastoma spatial transcriptomics,GSE195575,GSE195575,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8928215559724615,platform_constant,0.8928215559724615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016924,,,test,hesrt,samples/GSE195575/GSM7016924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7016925,liver,disease,hepatoblastoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2699,mousemodel_Heptablastoma spatial transcriptomics,GSE195575,GSE195575,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.9090533456791586,platform_constant,0.9090533456791586,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016925,,,test,hesrt,samples/GSE195575/GSM7016925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7016926,liver,disease,hepatoblastoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4458,mousemodel_Heptablastoma spatial transcriptomics,GSE195575,GSE195575,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8859623899229175,platform_constant,0.8859623899229175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37414763,,GSM7016926,,,test,hesrt,samples/GSE195575/GSM7016926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5841550,lymph node,normal,,popliteal lymph node,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,833,Spatial Transcriptomics of Joint-Draining Popliteal Lymph Nodes from Wild-type and TNF-Tg Mice with Early and Advanced Inflammatory-Erosive Arthritis,GSE195598,GSE195598,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001543,Popliteal Lymph Nodes,,luna,,Wild-type,age rule: age with unit,adult,5.5 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37691918,,GSM5841550,,,train,hesrt,samples/GSE195598/GSM5841550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5841551,lymph node,disease,arthritic joint disease,popliteal lymph node,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1489,Spatial Transcriptomics of Joint-Draining Popliteal Lymph Nodes from Wild-type and TNF-Tg Mice with Early and Advanced Inflammatory-Erosive Arthritis,GSE195598,GSE195598,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001543,Popliteal Lymph Nodes,MONDO:0005578,luna,Early arthritis,Early arthritis,age rule: age with unit,adult,5.5 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37691918,,GSM5841551,,,train,hesrt,samples/GSE195598/GSM5841551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5841552,lymph node,disease,arthritic joint disease,popliteal lymph node,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2015,Spatial Transcriptomics of Joint-Draining Popliteal Lymph Nodes from Wild-type and TNF-Tg Mice with Early and Advanced Inflammatory-Erosive Arthritis,GSE195598,GSE195598,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001543,Popliteal Lymph Nodes,MONDO:0005578,luna,Advanced arthritis,Advanced arthritis,age rule: age with unit,adult,8.5–9 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37691918,,GSM5841552,,,train,hesrt,samples/GSE195598/GSM5841552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5841553,lymph node,disease,arthritic joint disease,popliteal lymph node,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1782,Spatial Transcriptomics of Joint-Draining Popliteal Lymph Nodes from Wild-type and TNF-Tg Mice with Early and Advanced Inflammatory-Erosive Arthritis,GSE195598,GSE195598,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001543,Popliteal Lymph Nodes,MONDO:0005578,luna,Advanced arthritis,Advanced arthritis,age rule: age with unit,adult,8.5–9 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37691918,,GSM5841553,,,train,hesrt,samples/GSE195598/GSM5841553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844711,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,unknown,Visium,Visium,True,H&E,2236,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,neonatal or infant,0.5,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4716981132075472,platform_constant,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844711,,,val,hesrt,samples/GSE195661/GSM5844711,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844712,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,1959,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,juvenile,2,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8,platform_constant,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844712,,,val,hesrt,samples/GSE195661/GSM5844712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5844713,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,979,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,juvenile,2,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.143999979611512,platform_constant,4.143999979611512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844713,,,val,hesrt,samples/GSE195661/GSM5844713,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM5844714,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,unknown,Visium,Visium,True,H&E,3060,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,neonatal or infant,0.9,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8,platform_constant,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844714,,,val,hesrt,samples/GSE195661/GSM5844714,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844715,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,2705,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,juvenile,5,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4716981132075472,platform_constant,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844715,,,val,hesrt,samples/GSE195661/GSM5844715,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844716,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,1616,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,juvenile,6,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8,platform_constant,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844716,,,val,hesrt,samples/GSE195661/GSM5844716,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5844717,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,unknown,Visium,Visium,True,H&E,3027,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,neonatal or infant,0.6,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8,platform_constant,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844717,,,val,hesrt,samples/GSE195661/GSM5844717,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844718,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,1842,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,juvenile,1.9,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.143999979611512,platform_constant,4.143999979611512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844718,,,val,hesrt,samples/GSE195661/GSM5844718,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844719,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,3153,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,juvenile,2,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.143999979611512,platform_constant,4.143999979611512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844719,,,val,hesrt,samples/GSE195661/GSM5844719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5844720,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,2743,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,juvenile,6,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8,platform_constant,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844720,,,val,hesrt,samples/GSE195661/GSM5844720,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844721,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,2051,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,juvenile,3,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8,platform_constant,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844721,,,val,hesrt,samples/GSE195661/GSM5844721,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844722,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,2961,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,juvenile,1.9,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.145999979643136,platform_constant,4.145999979643136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844722,,,val,hesrt,samples/GSE195661/GSM5844722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5844723,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,unknown,Visium,Visium,True,H&E,3620,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,neonatal or infant,0.9,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8,platform_constant,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844723,,,val,hesrt,samples/GSE195661/GSM5844723,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5844724,brain,disease,ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,1262,Spatial transcriptomics reveal unnresolved wound repair as potential driver of PFA Ependymoma progression,GSE195661,GSE195661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,surgically resected tumor,MONDO:0016698,luna,ependymoma PFA subgroup,,age rule: bare number read as years,juvenile,5,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8,platform_constant,0.8,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36215273,,GSM5844724,,,val,hesrt,samples/GSE195661/GSM5844724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5862787,breast,disease,ductal breast carcinoma in situ,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1521,Single-Cell Transcriptome Profiling Reveals Intratumoral Heterogeneity and Molecular Features in Ductal Carcinoma In Situ of the Breast,GSE196208,GSE196208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,,MONDO:0005023,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.280565266668684,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35852797,,GSM5862787,,,train,sda-all,samples/GSE196208/GSM5862787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5885623,breast,disease,breast cancer,breast,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1229,Spatial Transcriptomics-based Identification of Molecular Markers for Nanomedicine Distribution in Tumor Tissue,GSE196506,GSE196506,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0000310,solid tumor,MONDO:0007254,luna,,untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36180396,,GSM5885623,,,train,sda-all,samples/GSE196506/GSM5885623,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 0.84, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM5907077,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,188,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis lesional skin,MONDO:0004980,luna,atopic dermatitis,lesional,luna,not stated,,not stated,,GSE197023:AD_1,AD_1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.51919993381866,platform_constant,4.51919993381866,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907077,,,train,hesrt,samples/GSE197023/GSM5907077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM5907078,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,335,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis lesional skin,MONDO:0004980,luna,atopic dermatitis,lesional,luna,not stated,,not stated,,GSE197023:AD_2,AD_2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.308768757974459,platform_constant,4.308768757974459,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907078,,,train,hesrt,samples/GSE197023/GSM5907078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907079,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,791,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis lesional skin,MONDO:0004980,luna,atopic dermatitis,lesional,luna,not stated,,not stated,,GSE197023:AD_3,AD_3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.336683255770365,platform_constant,4.336683255770365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907079,,,train,hesrt,samples/GSE197023/GSM5907079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM5907080,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1177,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis lesional skin,MONDO:0004980,luna,atopic dermatitis,lesional,luna,not stated,,not stated,,GSE197023:AD_4,AD_4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.308768757974459,platform_constant,4.308768757974459,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907080,,,train,hesrt,samples/GSE197023/GSM5907080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM5907081,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1081,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis lesional skin,MONDO:0004980,luna,atopic dermatitis,lesional,luna,not stated,,not stated,,GSE197023:AD_5,AD_5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.183879949452944,platform_constant,4.183879949452944,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907081,,,train,hesrt,samples/GSE197023/GSM5907081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM5907082,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1045,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis lesional skin,MONDO:0004980,luna,atopic dermatitis,lesional,luna,not stated,,not stated,,GSE197023:AD_6,AD_6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.32783373401641,platform_constant,4.32783373401641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907082,,,train,hesrt,samples/GSE197023/GSM5907082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM5907083,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1032,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis lesional skin,MONDO:0004980,luna,atopic dermatitis,lesional,luna,not stated,,not stated,,GSE197023:AD_7,AD_7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.318762936749759,platform_constant,4.318762936749759,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907083,,,train,hesrt,samples/GSE197023/GSM5907083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907084,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,95,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis non-lesional skin,MONDO:0004980,luna,atopic dermatitis,non-lesional,luna,not stated,,not stated,,GSE197023:AD_1,AD_1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.500875230679936,platform_constant,4.500875230679936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907084,,,train,hesrt,samples/GSE197023/GSM5907084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907085,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,419,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis non-lesional skin,MONDO:0004980,luna,atopic dermatitis,non-lesional,luna,not stated,,not stated,,GSE197023:AD_2,AD_2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.469383107572957,platform_constant,4.469383107572957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907085,,,train,hesrt,samples/GSE197023/GSM5907085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907086,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,754,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis non-lesional skin,MONDO:0004980,luna,atopic dermatitis,non-lesional,luna,not stated,,not stated,,GSE197023:AD_3,AD_3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.4891151937915765,platform_constant,4.4891151937915765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907086,,,train,hesrt,samples/GSE197023/GSM5907086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM5907088,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,975,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis non-lesional skin,MONDO:0004980,luna,atopic dermatitis,non-lesional,luna,not stated,,not stated,,GSE197023:AD_5,AD_5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.32783373401641,platform_constant,4.32783373401641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907088,,,train,hesrt,samples/GSE197023/GSM5907088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907089,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,815,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis non-lesional skin,MONDO:0004980,luna,atopic dermatitis,non-lesional,luna,not stated,,not stated,,GSE197023:AD_6,AD_6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.336683255770365,platform_constant,4.336683255770365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907089,,,train,hesrt,samples/GSE197023/GSM5907089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907090,skin,disease,atopic eczema,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,878,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Atopic dermatitis non-lesional skin,MONDO:0004980,luna,atopic dermatitis,non-lesional,luna,not stated,,not stated,,GSE197023:AD_7,AD_7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.4891151937915765,platform_constant,4.4891151937915765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907090,,,train,hesrt,samples/GSE197023/GSM5907090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907091,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,527,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,healthy,luna,not stated,,not stated,,GSE197023:HE_1,HE_1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.504504504504495,platform_constant,4.504504504504495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907091,,,train,hesrt,samples/GSE197023/GSM5907091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907092,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,722,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,healthy,luna,not stated,,not stated,,GSE197023:HE_2,HE_2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.587155963302738,platform_constant,4.587155963302738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907092,,,train,hesrt,samples/GSE197023/GSM5907092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907093,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,629,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,healthy,luna,not stated,,not stated,,GSE197023:HE_3,HE_3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.3366832557703425,platform_constant,4.3366832557703425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907093,,,train,hesrt,samples/GSE197023/GSM5907093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907094,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,838,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,healthy,luna,not stated,,not stated,,GSE197023:HE_4,HE_4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.318762936749759,platform_constant,4.318762936749759,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907094,,,train,hesrt,samples/GSE197023/GSM5907094,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907095,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,653,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,healthy,luna,not stated,,not stated,,GSE197023:HE_5,HE_5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.327833734016389,platform_constant,4.327833734016389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907095,,,train,hesrt,samples/GSE197023/GSM5907095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5907096,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,788,Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST],GSE197023,GSE197023,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,healthy,luna,not stated,,not stated,,GSE197023:HE_6,HE_6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21587,counts,pixel,4.29973791938996,platform_constant,4.29973791938996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37312623,10.1111/all.15781,GSM5907096,,,train,hesrt,samples/GSE197023/GSM5907096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5910280,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,38263,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910280,,,train,sda-all,samples/GSE197150/GSM5910280,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910281,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,33845,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,613,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910281,,,train,sda-all,samples/GSE197150/GSM5910281,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5910282,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,23390,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,607,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910282,,,train,sda-all,samples/GSE197150/GSM5910282,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5910283,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,16178,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,610,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910283,,,train,sda-all,samples/GSE197150/GSM5910283,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM5910284,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,34305,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910284,,,train,sda-all,samples/GSE197150/GSM5910284,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM5910285,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,27708,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,613,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910285,,,train,sda-all,samples/GSE197150/GSM5910285,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5910286,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,38964,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910286,,,train,sda-all,samples/GSE197150/GSM5910286,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM5910287,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,14837,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,613,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910287,,,train,sda-all,samples/GSE197150/GSM5910287,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5910288,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,22461,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,610,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910288,,,train,sda-all,samples/GSE197150/GSM5910288,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM5910289,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,6717,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,613,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910289,,,train,sda-all,samples/GSE197150/GSM5910289,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5910290,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,31875,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,609,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910290,,,train,sda-all,samples/GSE197150/GSM5910290,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM5910291,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,49596,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910291,,,train,sda-all,samples/GSE197150/GSM5910291,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910292,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,7270,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,102,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910292,,,train,sda-all,samples/GSE197150/GSM5910292,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910293,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,12972,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,102,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910293,,,train,sda-all,samples/GSE197150/GSM5910293,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM5910294,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,20583,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,102,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910294,,,train,sda-all,samples/GSE197150/GSM5910294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM5910295,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,34616,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,102,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910295,,,train,sda-all,samples/GSE197150/GSM5910295,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5910296,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,21116,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,102,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910296,,,train,sda-all,samples/GSE197150/GSM5910296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 0.99}",,
GSM5910297,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,15542,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,102,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910297,,,train,sda-all,samples/GSE197150/GSM5910297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5910298,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,15543,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,102,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910298,,,train,sda-all,samples/GSE197150/GSM5910298,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5910299,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,21137,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,102,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910299,,,train,sda-all,samples/GSE197150/GSM5910299,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5910300,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8181,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910300,,,train,sda-all,samples/GSE197150/GSM5910300,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM5910301,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,34963,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910301,,,train,sda-all,samples/GSE197150/GSM5910301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.87, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM5910302,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,13636,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910302,,,train,sda-all,samples/GSE197150/GSM5910302,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5910303,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,13004,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910303,,,train,sda-all,samples/GSE197150/GSM5910303,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5910304,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,7955,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910304,,,train,sda-all,samples/GSE197150/GSM5910304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910305,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,34178,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910305,,,train,sda-all,samples/GSE197150/GSM5910305,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM5910306,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,34839,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910306,,,train,sda-all,samples/GSE197150/GSM5910306,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5910307,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,21940,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910307,,,train,sda-all,samples/GSE197150/GSM5910307,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM5910308,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,16419,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910308,,,train,sda-all,samples/GSE197150/GSM5910308,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5910309,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,14805,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910309,,,train,sda-all,samples/GSE197150/GSM5910309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.86, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5910310,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,31932,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910310,,,train,sda-all,samples/GSE197150/GSM5910310,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5910311,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,19819,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910311,,,train,sda-all,samples/GSE197150/GSM5910311,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM5910312,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,18343,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910312,,,train,sda-all,samples/GSE197150/GSM5910312,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM5910313,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,33896,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,94,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910313,,,train,sda-all,samples/GSE197150/GSM5910313,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.62, ""life_stage"": 0.99}",,
GSM5910314,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,5132,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910314,,,train,sda-all,samples/GSE197150/GSM5910314,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM5910315,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,4893,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910315,,,train,sda-all,samples/GSE197150/GSM5910315,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM5910316,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10538,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910316,,,train,sda-all,samples/GSE197150/GSM5910316,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910317,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,14849,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910317,,,train,sda-all,samples/GSE197150/GSM5910317,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM5910318,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,22415,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910318,,,train,sda-all,samples/GSE197150/GSM5910318,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM5910319,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,9998,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910319,,,train,sda-all,samples/GSE197150/GSM5910319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM5910320,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12319,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910320,,,train,sda-all,samples/GSE197150/GSM5910320,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM5910321,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12846,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910321,,,train,sda-all,samples/GSE197150/GSM5910321,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM5910322,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,33625,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910322,,,train,sda-all,samples/GSE197150/GSM5910322,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM5910323,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,14373,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910323,,,train,sda-all,samples/GSE197150/GSM5910323,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM5910324,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,33531,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910324,,,train,sda-all,samples/GSE197150/GSM5910324,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5910325,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,4905,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910325,,,train,sda-all,samples/GSE197150/GSM5910325,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM5910326,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,21140,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,126,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM5910326,,,train,sda-all,samples/GSE197150/GSM5910326,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7709892,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,20654,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709892,,,train,sda-all,samples/GSE197150/GSM7709892,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM7709893,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10126,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709893,,,train,sda-all,samples/GSE197150/GSM7709893,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM7709894,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8666,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709894,,,train,sda-all,samples/GSE197150/GSM7709894,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7709895,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,40435,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709895,,,train,sda-all,samples/GSE197150/GSM7709895,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.81, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7709896,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,34692,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709896,,,train,sda-all,samples/GSE197150/GSM7709896,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7709897,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,7432,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709897,,,train,sda-all,samples/GSE197150/GSM7709897,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM7709898,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,17873,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709898,,,train,sda-all,samples/GSE197150/GSM7709898,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7709899,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,19283,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709899,,,train,sda-all,samples/GSE197150/GSM7709899,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM7709900,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,26829,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709900,,,train,sda-all,samples/GSE197150/GSM7709900,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM7709901,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11540,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,610,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709901,,,train,sda-all,samples/GSE197150/GSM7709901,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7709902,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,6987,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709902,,,train,sda-all,samples/GSE197150/GSM7709902,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.8, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7709903,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,23983,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709903,,,train,sda-all,samples/GSE197150/GSM7709903,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM7709904,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,15182,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,611,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709904,,,train,sda-all,samples/GSE197150/GSM7709904,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM7709905,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,25765,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709905,,,train,sda-all,samples/GSE197150/GSM7709905,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7709906,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11635,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709906,,,train,sda-all,samples/GSE197150/GSM7709906,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7709907,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,28490,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709907,,,train,sda-all,samples/GSE197150/GSM7709907,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7709908,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,19501,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709908,,,train,sda-all,samples/GSE197150/GSM7709908,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.79, ""life_stage"": 0.99}",,
GSM7709909,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,40008,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709909,,,train,sda-all,samples/GSE197150/GSM7709909,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM7709910,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,17599,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709910,,,train,sda-all,samples/GSE197150/GSM7709910,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7709911,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,34662,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709911,,,train,sda-all,samples/GSE197150/GSM7709911,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM7709912,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,5960,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709912,,,train,sda-all,samples/GSE197150/GSM7709912,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM7709913,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,26197,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,F,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM7709913,,,train,sda-all,samples/GSE197150/GSM7709913,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8291572,brain,normal,,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,36027,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,,luna,control,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM8291572,,,train,sda-all,samples/GSE197150/GSM8291572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM8291573,brain,disease,autism,forebrain,organoid,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,34182,multiplexed RNA imaging of human forebrain organoids from typical and autism subjects [MERFISH],GSE197150,GSE197150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001890,8-week forebrain organoid,MONDO:0005260,luna,case,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,M,,,fresh frozen,OCT-embedded,release v3,imaging-based,MERFISH,,,cell,614,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42288509,,GSM8291573,,,train,sda-all,samples/GSE197150/GSM8291573,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM5914541,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1550,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,GSE197317,GSE197317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human fetal pancreas,,luna,,,age rule: post-conception / gestational weeks,fetal,15 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.082352443284472,platform_constant,4.082352443284472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914541,,,test,hesrt,samples/GSE197317/GSM5914541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5914542,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1546,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,GSE197317,GSE197317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human fetal pancreas,,luna,,,age rule: post-conception / gestational weeks,fetal,15 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.154724554752076,platform_constant,4.154724554752076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914542,,,test,hesrt,samples/GSE197317/GSM5914542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5914543,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1498,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,GSE197317,GSE197317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human fetal pancreas,,luna,,,age rule: post-conception / gestational weeks,fetal,18 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.140707417968897,platform_constant,4.140707417968897,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914543,,,test,hesrt,samples/GSE197317/GSM5914543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5914544,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1196,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,GSE197317,GSE197317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human fetal pancreas,,luna,,,age rule: post-conception / gestational weeks,fetal,18 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.155089574999639,platform_constant,4.155089574999639,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914544,,,test,hesrt,samples/GSE197317/GSM5914544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5914545,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,2126,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,GSE197317,GSE197317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human fetal pancreas,,luna,,,age rule: post-conception / gestational weeks,fetal,20 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.108176053261535,platform_constant,4.108176053261535,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914545,,,test,hesrt,samples/GSE197317/GSM5914545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5914546,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1719,Single cell transcriptomic and spatial landscapes of the developing human pancreas - spatial transcriptomics,GSE197317,GSE197317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,human fetal pancreas,,luna,,,age rule: post-conception / gestational weeks,fetal,20 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.206454808290927,platform_constant,4.206454808290927,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36513063,,GSM5914546,,,test,hesrt,samples/GSE197317/GSM5914546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5935792,adipose tissue,normal,,white adipose tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1493,Obesity disrupts innate-adaptive immune network patterning in adipose tissue,GSE198012,GSE198012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001347,white adipose,,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,31053,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37651193,,GSM5935792,,,val,sda-all,samples/GSE198012/GSM5935792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5935793,adipose tissue,normal,,white adipose tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2036,Obesity disrupts innate-adaptive immune network patterning in adipose tissue,GSE198012,GSE198012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001347,white adipose,,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,31053,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37651193,,GSM5935793,,,val,sda-all,samples/GSE198012/GSM5935793,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5935794,adipose tissue,disease,obesity disorder,white adipose tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3394,Obesity disrupts innate-adaptive immune network patterning in adipose tissue,GSE198012,GSE198012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001347,white adipose,MONDO:0011122,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,31053,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37651193,,GSM5935794,,,val,sda-all,samples/GSE198012/GSM5935794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM5935795,adipose tissue,disease,obesity disorder,white adipose tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1994,Obesity disrupts innate-adaptive immune network patterning in adipose tissue,GSE198012,GSE198012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001347,white adipose,MONDO:0011122,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,31053,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37651193,,GSM5935795,,,val,sda-all,samples/GSE198012/GSM5935795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM5939574,plant,normal,,,primary tissue,Phalaenopsis aphrodite,,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2379,Spatiotemporal transcriptomes of orchid flowers,GSE198128,GSE198128,212056,Phalaenopsis aphrodite,212056,,False,False,GEO organism field,Phalaenopsis aphrodite,,luna,,Flower,,luna,,,luna,not stated,bud 1-6,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,28903,counts,um,1.0,verified,4.0646739289732485,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36095130,,GSM5939574,,,train,sda-all,samples/GSE198128/GSM5939574,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM5939575,plant,normal,,,primary tissue,Phalaenopsis aphrodite,,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2467,Spatiotemporal transcriptomes of orchid flowers,GSE198128,GSE198128,212056,Phalaenopsis aphrodite,212056,,False,False,GEO organism field,Phalaenopsis aphrodite,,luna,,Flower,,luna,,,luna,not stated,bud 7,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,28903,counts,um,1.0,verified,4.022652073473422,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36095130,,GSM5939575,,,train,sda-all,samples/GSE198128/GSM5939575,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM5939576,plant,normal,,,primary tissue,Phalaenopsis aphrodite,,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3407,Spatiotemporal transcriptomes of orchid flowers,GSE198128,GSE198128,212056,Phalaenopsis aphrodite,212056,,False,False,GEO organism field,Phalaenopsis aphrodite,,luna,,Flower,,luna,,,luna,not stated,bud 8,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,28903,counts,um,1.0,verified,4.1036272544834755,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36095130,,GSM5939576,,,train,sda-all,samples/GSE198128/GSM5939576,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM5945505,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),2653,Integration of whole transcriptome spatial profiling with protein markers,GSE198353,GSE198353,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,mouse spleen,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32306,counts,um,1.0,verified,4.766195386948848,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36593397,,GSM5945505,,,train,sda-all,samples/GSE198353/GSM5945505,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM5945507,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),2768,Integration of whole transcriptome spatial profiling with protein markers,GSE198353,GSE198353,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,mouse spleen,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32306,counts,um,1.0,verified,4.765819696129341,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36593397,,GSM5945507,,,train,sda-all,samples/GSE198353/GSM5945507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5945509,breast,disease,breast cancer,breast,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: green (heuristic),1978,Integration of whole transcriptome spatial profiling with protein markers,GSE198353,GSE198353,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000310,mouse breast tumor,MONDO:0007254,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32286,counts,um,1.0,verified,4.349964703275878,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36593397,,GSM5945509,,,train,sda-all,samples/GSE198353/GSM5945509,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM5956095,breast,disease,breast cancer,mammary gland,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,4186,Single-cell and spatially resolved analysis uncovers cell heterogeneity of breast cancer,GSE198745,GSE198745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Primary Breast Tumor,MONDO:0007254,luna,breast cancer,untreated,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.772585909990478,platform_constant,3.772585909990478,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35241110,,GSM5956095,,,train,hesrt,samples/GSE198745/GSM5956095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM5970832,other,perturbation,,tail,primary tissue,Schmidtea mediterranea,freshwater planarian,not stated,unknown,Slide-seq,Slide-seqV2,False,,24821,Molecular and cellular characterization of planarian stem cell microenvironments,GSE199348,GSE199348,79327,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,luna,UBERON:0002415,Intact animal and tail fragments,,luna,,WT Intact animal embedded with tail fragments 6 hours post amputation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide-seqV2,,,bead,30636,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM5970832,,,train,sda-all,samples/GSE199348/GSM5970832,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.55, ""uberon"": 0.52, ""life_stage"": 0.59}",disease_status;uberon;life_stage,low_confidence_annotation
GSM5970833,other,perturbation,,tail,primary tissue,Schmidtea mediterranea,freshwater planarian,adult,unknown,Slide-seq,Slide-seqV2,False,,30146,Molecular and cellular characterization of planarian stem cell microenvironments,GSE199348,GSE199348,79327,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,luna,UBERON:0002415,Intact animal and tail fragments,,luna,,WT Intact animal embedded with tail fragments 48 hours post amputation,luna,adult,,not stated,,,,,,release v3,sequencing-based,slide-seqV2,,,bead,31442,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM5970833,,,train,sda-all,samples/GSE199348/GSM5970833,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.54, ""disease_status"": 0.55, ""uberon"": 0.34, ""life_stage"": 0.51}",sample_kind;disease_status;uberon;life_stage,low_confidence_annotation
GSM5970834,other,perturbation,,tail,primary tissue,Schmidtea mediterranea,freshwater planarian,not stated,unknown,Slide-seq,Slide-seqV2,False,,32319,Molecular and cellular characterization of planarian stem cell microenvironments,GSE199348,GSE199348,79327,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,luna,UBERON:0002415,Intact animal and tail fragments,,luna,,WT Intact animal embedded with tail fragments 6 hours post amputation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide-seqV2,,,bead,30494,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM5970834,,,train,sda-all,samples/GSE199348/GSM5970834,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.61, ""uberon"": 0.36, ""life_stage"": 0.43}",uberon;life_stage,low_confidence_annotation
GSM5970835,other,perturbation,,tail,primary tissue,Schmidtea mediterranea,freshwater planarian,not stated,unknown,Slide-seq,Slide-seqV2,False,,26024,Molecular and cellular characterization of planarian stem cell microenvironments,GSE199348,GSE199348,79327,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,luna,UBERON:0002415,Intact animal and tail fragments,,luna,,WT Intact animal embedded with tail fragments 48 hours post amputation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide-seqV2,,,bead,31511,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM5970835,,,train,sda-all,samples/GSE199348/GSM5970835,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.55, ""disease_status"": 0.6000000000000001, ""uberon"": 0.44, ""life_stage"": 0.59}",sample_kind;uberon;life_stage,low_confidence_annotation
GSM5979972,skeletal muscle,normal,,quadriceps femoris,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2348,"Spatial transcriptomics (Visium, 10x Genomics) data of Duchenne mouse models",GSE199659,GSE199659,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001377,skeletal muscle (quadriceps),,luna,,wildtype,age rule: age with unit,adult,10 weeks,not stated,,GSE199659:C57BL10,C57BL10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.425559461139513,platform_constant,4.425559461139513,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37582915,,GSM5979972,,,val,hesrt,samples/GSE199659/GSM5979972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM5979973,skeletal muscle,normal,,quadriceps femoris,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1426,"Spatial transcriptomics (Visium, 10x Genomics) data of Duchenne mouse models",GSE199659,GSE199659,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001377,skeletal muscle (quadriceps),,luna,,wildtype,age rule: age with unit,adult,10 weeks,not stated,,GSE199659:DBA/2J,DBA/2J,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.320223474349918,platform_constant,4.320223474349918,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37582915,,GSM5979973,,,val,hesrt,samples/GSE199659/GSM5979973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5979974,skeletal muscle,disease,Duchenne muscular dystrophy,quadriceps femoris,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1884,"Spatial transcriptomics (Visium, 10x Genomics) data of Duchenne mouse models",GSE199659,GSE199659,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001377,skeletal muscle (quadriceps),MONDO:0010679,luna,,affected DMD mouse model,age rule: age with unit,adult,10 weeks,not stated,,GSE199659:mdx,mdx,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.319048192683448,platform_constant,4.319048192683448,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37582915,,GSM5979974,,,val,hesrt,samples/GSE199659/GSM5979974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM5979975,skeletal muscle,disease,Duchenne muscular dystrophy,quadriceps femoris,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1370,"Spatial transcriptomics (Visium, 10x Genomics) data of Duchenne mouse models",GSE199659,GSE199659,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001377,skeletal muscle (quadriceps),MONDO:0010679,luna,,affected DMD mouse model,age rule: age with unit,adult,10 weeks,not stated,,GSE199659:D2-mdx,D2-mdx,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.319048192683448,platform_constant,4.319048192683448,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37582915,,GSM5979975,,,val,hesrt,samples/GSE199659/GSM5979975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6030901,head and neck,disease,nasopharyngeal carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1331,Spatial transcriptome sequencing of primary nasopharyngeal carcinoma tissues,GSE200310,GSE200310,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,Nasopharyngeal carcinoma tissue,MONDO:0015459,luna,nasopharyngeal carcinoma,Primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.053927581768989,platform_constant,4.053927581768989,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37024479,,GSM6030901,,,train,hesrt,samples/GSE200310/GSM6030901,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.26, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6030902,head and neck,disease,nasopharyngeal carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1089,Spatial transcriptome sequencing of primary nasopharyngeal carcinoma tissues,GSE200310,GSE200310,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,Nasopharyngeal carcinoma tissue,MONDO:0015459,luna,nasopharyngeal carcinoma,Primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.053504659561155,platform_constant,4.053504659561155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37024479,,GSM6030902,,,train,hesrt,samples/GSE200310/GSM6030902,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6042726,spleen,disease,infectious disease,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2774,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),GSE200720,GSE200720,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005550,luna,LCMV Cl13 infection,"Control, Day 7",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.68184978547314,platform_constant,4.68184978547314,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042726,,,val,hesrt,samples/GSE200720/GSM6042726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6042727,spleen,disease,infectious disease,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2177,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),GSE200720,GSE200720,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005550,luna,LCMV Cl13 infection,"CD4 Depleted, Day 7",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.166666666666667,platform_constant,4.166666666666667,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042727,,,val,hesrt,samples/GSE200720/GSM6042727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6042728,spleen,disease,infectious disease,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2659,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),GSE200720,GSE200720,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005550,luna,LCMV Cl13 infection,"Control, Day 21",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.160812872143392,platform_constant,4.160812872143392,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042728,,,val,hesrt,samples/GSE200720/GSM6042728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM6042729,spleen,disease,infectious disease,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2495,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),GSE200720,GSE200720,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005550,luna,LCMV Cl13 infection,"CD4 Depleted, Day 21",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.309704312711209,platform_constant,4.309704312711209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042729,,,val,hesrt,samples/GSE200720/GSM6042729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6042730,spleen,disease,infectious disease,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2254,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),GSE200720,GSE200720,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005550,luna,LCMV Cl13 infection,"Control, Day 7",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.705703140620075,platform_constant,4.705703140620075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042730,,,val,hesrt,samples/GSE200720/GSM6042730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6042731,spleen,disease,infectious disease,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2714,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),GSE200720,GSE200720,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005550,luna,LCMV Cl13 infection,"CD4 Depleted, Day 7",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.700969604771208,platform_constant,4.700969604771208,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042731,,,val,hesrt,samples/GSE200720/GSM6042731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6042732,spleen,disease,infectious disease,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3018,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),GSE200720,GSE200720,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005550,luna,LCMV Cl13 infection,"CD4 Depleted, Day 21",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.704243328363627,platform_constant,4.704243328363627,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042732,,,val,hesrt,samples/GSE200720/GSM6042732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM6042733,spleen,disease,infectious disease,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1669,Spatial RNA-sequencing of day7 and day 21 post-LCMV Cl13 infection following transient CD4+ T cell depletion (Visium),GSE200720,GSE200720,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005550,luna,LCMV Cl13 infection,"CD4 Depleted, Day 21",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.706079180720907,platform_constant,4.706079180720907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36450262,,GSM6042733,,,val,hesrt,samples/GSE200720/GSM6042733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM7164986,skin,disease,melanoma;cancer,,tumour tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,1330,MacroH2A restricts melanoma progression via inhibition of chemokine expression in cancer-associated fibroblasts.,GSE200751,GSE200751,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Melanoma tissue section,MONDO:0005105;MONDO:0004992,luna,,WT,luna,not stated,,extracted field,female,GSE200751:19333,19333,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.391874989108155,platform_constant,4.391874989108155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37605008,,GSM7164986,,,train,hesrt,samples/GSE200751/GSM7164986,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7164987,skin,disease,melanoma;cancer,,tumour tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,1739,MacroH2A restricts melanoma progression via inhibition of chemokine expression in cancer-associated fibroblasts.,GSE200751,GSE200751,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Melanoma tissue section,MONDO:0005105;MONDO:0004992,luna,,dKO,luna,not stated,,extracted field,female,GSE200751:19331,19331,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.391874989108155,platform_constant,4.391874989108155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37605008,,GSM7164987,,,train,hesrt,samples/GSE200751/GSM7164987,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM6068593,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2663,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,GSE201610,GSE201610,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,home cage,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.042823995461373,platform_constant,4.042823995461373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-e9ad1b4f3195,cross_gse_redeposit,GSM6939162,train,hesrt,samples/GSE201610/GSM6068593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6068594,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2663,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,GSE201610,GSE201610,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,home cage,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.042361072344879,platform_constant,4.042361072344879,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-2411b62788f7,cross_gse_redeposit,GSM6939164,train,hesrt,samples/GSE201610/GSM6068594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6068595,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2838,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,GSE201610,GSE201610,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,home cage,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.043518543653036,platform_constant,4.043518543653036,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-c913fa2a4863,cross_gse_redeposit,GSM6939166,train,hesrt,samples/GSE201610/GSM6068595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6068596,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2550,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,GSE201610,GSE201610,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,spatial object recognition training,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.04236107234486,platform_constant,4.04236107234486,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-eb7a2767080d,cross_gse_redeposit,GSM6939163,train,hesrt,samples/GSE201610/GSM6068596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6068597,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2936,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,GSE201610,GSE201610,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,spatial object recognition training,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.043981449331831,platform_constant,4.043981449331831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-8e26dac8956f,cross_gse_redeposit,GSM6939165,train,hesrt,samples/GSE201610/GSM6068597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6068598,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2778,Spatial RNA sequencing of mouses brain slices following spatial object recognition training,GSE201610,GSE201610,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,spatial object recognition training,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.042823995461373,platform_constant,4.042823995461373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,CG-cf63363e6152,cross_gse_redeposit,GSM6939167,train,hesrt,samples/GSE201610/GSM6068598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6086615,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,469,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Lesional,luna,not stated,,not stated,,GSE202011:patient 1,patient 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.504216396693779,platform_constant,4.504216396693779,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086615,,,train,hesrt,samples/GSE202011/GSM6086615,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086616,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,660,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Non-Lesional,luna,not stated,,not stated,,GSE202011:patient 1,patient 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.5818099338836085,platform_constant,4.5818099338836085,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086616,,,train,hesrt,samples/GSE202011/GSM6086616,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM6086617,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,459,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Lesional,luna,not stated,,not stated,,GSE202011:patient 2,patient 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.489999984285006,platform_constant,4.489999984285006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086617,,,train,hesrt,samples/GSE202011/GSM6086617,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM6086618,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1044,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Lesional,luna,not stated,,not stated,,GSE202011:patient 2,patient 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.449107029516154,platform_constant,4.449107029516154,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086618,,,train,hesrt,samples/GSE202011/GSM6086618,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086619,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,447,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Non-Lesional,luna,not stated,,not stated,,GSE202011:patient 2,patient 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.633999909891887,platform_constant,4.633999909891887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086619,,,train,hesrt,samples/GSE202011/GSM6086619,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086620,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,230,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Lesional,luna,not stated,,not stated,,GSE202011:patient 2,patient 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.407981431230953,platform_constant,4.407981431230953,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,CG-37a98aa01676,cross_gse_redeposit,GSM7648697,train,hesrt,samples/GSE202011/GSM6086620,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086621,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1183,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Lesional,luna,not stated,,not stated,,GSE202011:patient 2,patient 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.530357007172951,platform_constant,4.530357007172951,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086621,,,train,hesrt,samples/GSE202011/GSM6086621,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086622,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,662,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Non-Lesional,luna,not stated,,not stated,,GSE202011:patient 2,patient 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.548715142082444,platform_constant,4.548715142082444,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,CG-153129d73187,cross_gse_redeposit,GSM7648698,train,hesrt,samples/GSE202011/GSM6086622,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM6086623,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,660,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Lesional,luna,not stated,,not stated,,GSE202011:patient 1,patient 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.551529578207669,platform_constant,4.551529578207669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086623,,,train,hesrt,samples/GSE202011/GSM6086623,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086624,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,331,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Non-Lesional,luna,not stated,,not stated,,GSE202011:patient 1,patient 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.40769753197887,platform_constant,4.40769753197887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086624,,,train,hesrt,samples/GSE202011/GSM6086624,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086625,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,684,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Lesional,luna,not stated,,not stated,,GSE202011:patient 3,patient 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.562000090327603,platform_constant,4.562000090327603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086625,,,train,hesrt,samples/GSE202011/GSM6086625,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086626,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,873,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Non-Lesional,luna,not stated,,not stated,,GSE202011:patient 3,patient 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.433999911320025,platform_constant,4.433999911320025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086626,,,train,hesrt,samples/GSE202011/GSM6086626,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM6086627,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,705,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Lesional,luna,not stated,,not stated,,GSE202011:patient 3,patient 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.5487151420824565,platform_constant,4.5487151420824565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086627,,,train,hesrt,samples/GSE202011/GSM6086627,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM6086628,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1122,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Lesional,luna,not stated,,not stated,,GSE202011:patient 3,patient 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.513392781769191,platform_constant,4.513392781769191,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086628,,,train,hesrt,samples/GSE202011/GSM6086628,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM6086629,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,763,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Non-Lesional,luna,not stated,,not stated,,GSE202011:patient 3,patient 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.32856741552915,platform_constant,4.32856741552915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086629,,,train,hesrt,samples/GSE202011/GSM6086629,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086630,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,983,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Lesional,luna,not stated,,not stated,,GSE202011:patient 4,patient 4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.518643262720346,platform_constant,4.518643262720346,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086630,,,train,hesrt,samples/GSE202011/GSM6086630,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086631,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,929,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Non-Lesional,luna,not stated,,not stated,,GSE202011:patient 4,patient 4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.626615672609428,platform_constant,4.626615672609428,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086631,,,train,hesrt,samples/GSE202011/GSM6086631,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.66, ""life_stage"": 0.99}",,
GSM6086632,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,830,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Lesional,luna,not stated,,not stated,,GSE202011:patient 5,patient 5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.66890489910025,platform_constant,4.66890489910025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086632,,,train,hesrt,samples/GSE202011/GSM6086632,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM6086633,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,955,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Non-Lesional,luna,not stated,,not stated,,GSE202011:patient 5,patient 5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.588825326129652,platform_constant,4.588825326129652,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086633,,,train,hesrt,samples/GSE202011/GSM6086633,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086634,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),654,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Lesional,luna,not stated,,not stated,,GSE202011:patient 4,patient 4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.5272579039528855,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37267384;41743834,,GSM6086634,,,train,sda-all,samples/GSE202011/GSM6086634,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086635,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,685,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Non-Lesional,luna,not stated,,not stated,,GSE202011:patient 4,patient 4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,FAIL,,,37267384;41743834,,GSM6086635,,,train,sda-all,samples/GSE202011/GSM6086635,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM6086636,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1448,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0005083,luna,Psoriasis (PsO),Lesional,luna,not stated,,not stated,,GSE202011:patient 6,patient 6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.529335177045596,platform_constant,4.529335177045596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086636,,,train,hesrt,samples/GSE202011/GSM6086636,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086637,skin,disease,psoriatic arthritis;psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,651,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0011849;MONDO:0005083,luna,Psoriatic Arthritis (PsA),Lesional,luna,not stated,,not stated,,GSE202011:patient 5,patient 5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.680244123701367,platform_constant,4.680244123701367,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086637,,,train,hesrt,samples/GSE202011/GSM6086637,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086638,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,786,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,,luna,,Healthy,luna,not stated,,not stated,,GSE202011:Healthy Volunteer 1,Healthy Volunteer 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.477343090751624,platform_constant,4.477343090751624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086638,,,train,hesrt,samples/GSE202011/GSM6086638,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6086639,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1070,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,,luna,,Healthy,luna,not stated,,not stated,,GSE202011:Healthy Volunteer 1,Healthy Volunteer 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.450779763829714,platform_constant,4.450779763829714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086639,,,train,hesrt,samples/GSE202011/GSM6086639,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086640,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,634,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,,luna,,Healthy,luna,not stated,,not stated,,GSE202011:Healthy Volunteer 2,Healthy Volunteer 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.588924783860095,platform_constant,4.588924783860095,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086640,,,train,hesrt,samples/GSE202011/GSM6086640,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM6086641,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,977,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,,luna,,Healthy,luna,not stated,,not stated,,GSE202011:Healthy Volunteer 2,Healthy Volunteer 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.405357124310601,platform_constant,4.405357124310601,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086641,,,train,hesrt,samples/GSE202011/GSM6086641,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM6086642,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1099,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,,luna,,Healthy,luna,not stated,,not stated,,GSE202011:Healthy Volunteer 3,Healthy Volunteer 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.663706139945142,platform_constant,4.663706139945142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086642,,,train,hesrt,samples/GSE202011/GSM6086642,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 0.9400000000000001}",,
GSM6086643,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1203,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,,luna,,Healthy,luna,not stated,,not stated,,GSE202011:Healthy Volunteer 3,Healthy Volunteer 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.68437865198333,platform_constant,4.68437865198333,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086643,,,train,hesrt,samples/GSE202011/GSM6086643,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 0.99}",,
GSM6086644,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1031,Spatial transcriptomics stratifies psoriatic disease by emergent cellular ecosystems,GSE202011,GSE202011,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,,luna,,Healthy,luna,not stated,,not stated,,GSE202011:Healthy Volunteer 2,Healthy Volunteer 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.609957772020336,platform_constant,4.609957772020336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37267384;41743834,,GSM6086644,,,train,hesrt,samples/GSE202011/GSM6086644,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6108346,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1986,Spatial sequencing of young and aged lungs following influenza A virus infection,GSE202322,GSE202322,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005812,luna,,Day 0 Young,age rule: age with unit,adult,16 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.756792259097891,platform_constant,4.756792259097891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108346,,,test,hesrt,samples/GSE202322/GSM6108346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM6108347,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,2218,Spatial sequencing of young and aged lungs following influenza A virus infection,GSE202322,GSE202322,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005812,luna,,Day 0 Aged,age rule: age with unit,aged,80 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.713707366382172,platform_constant,4.713707366382172,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108347,,,test,hesrt,samples/GSE202322/GSM6108347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6108348,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2486,Spatial sequencing of young and aged lungs following influenza A virus infection,GSE202322,GSE202322,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005812,luna,,Day 3 Young,age rule: age with unit,not stated,16 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.1312048706291575,platform_constant,5.1312048706291575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108348,,,test,hesrt,samples/GSE202322/GSM6108348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM6108349,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,2520,Spatial sequencing of young and aged lungs following influenza A virus infection,GSE202322,GSE202322,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005812,luna,,Day 3 Aged,age rule: age with unit,aged,80 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.112593740315617,platform_constant,5.112593740315617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108349,,,test,hesrt,samples/GSE202322/GSM6108349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6108350,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2847,Spatial sequencing of young and aged lungs following influenza A virus infection,GSE202322,GSE202322,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005812,luna,,Day 9 Young,age rule: age with unit,not stated,16 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.700657071609306,platform_constant,4.700657071609306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108350,,,test,hesrt,samples/GSE202322/GSM6108350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM6108351,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,2969,Spatial sequencing of young and aged lungs following influenza A virus infection,GSE202322,GSE202322,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005812,luna,,Day 9 Aged,age rule: age with unit,aged,80 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.730517953305762,platform_constant,4.730517953305762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37852965,,GSM6108351,,,test,hesrt,samples/GSE202322/GSM6108351,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6125919,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERFISH,False,,97459,Spatial Transcriptomics correlated Electron Microscopy [MERFISH],GSE202623,GSE202623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,18 weeks,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,385,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37433806,,GSM6125919,,,test,sda-all,samples/GSE202623/GSM6125919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6125920,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERFISH,False,,123651,Spatial Transcriptomics correlated Electron Microscopy [MERFISH],GSE202623,GSE202623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,18 weeks,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,385,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37433806,,GSM6125920,,,test,sda-all,samples/GSE202623/GSM6125920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6125921,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERFISH,False,,126858,Spatial Transcriptomics correlated Electron Microscopy [MERFISH],GSE202623,GSE202623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,18 weeks,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,385,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37433806,,GSM6125921,,,test,sda-all,samples/GSE202623/GSM6125921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6171782,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2549,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,,luna,,cornoil,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.175681545587936,platform_constant,4.175681545587936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171782,,,train,hesrt,samples/GSE203424/GSM6171782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171783,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3025,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,MONDO:0004975,mondo_predicate (Luna: perturbation),,tamoxifen,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.174543086023732,platform_constant,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171783,,,train,hesrt,samples/GSE203424/GSM6171783,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171784,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2731,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,MONDO:0004975,luna,,cornoil,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.175681545587936,platform_constant,4.175681545587936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171784,,,train,hesrt,samples/GSE203424/GSM6171784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6171785,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3513,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,MONDO:0004975,luna,,tamoxifen,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.175681545587936,platform_constant,4.175681545587936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171785,,,train,hesrt,samples/GSE203424/GSM6171785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6171786,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2841,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,,luna,,cornoil,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.174543086023732,platform_constant,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171786,,,train,hesrt,samples/GSE203424/GSM6171786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171787,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3126,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,MONDO:0004975,mondo_predicate (Luna: perturbation),,tamoxifen,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.174543086023732,platform_constant,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171787,,,train,hesrt,samples/GSE203424/GSM6171787,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171788,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2601,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,MONDO:0004975,luna,,cornoil,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.175681545587938,platform_constant,4.175681545587938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171788,,,train,hesrt,samples/GSE203424/GSM6171788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6171789,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3078,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,MONDO:0004975,luna,,tamoxifen,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.175681545587936,platform_constant,4.175681545587936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171789,,,train,hesrt,samples/GSE203424/GSM6171789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6171790,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2647,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,,luna,,cornoil,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.175681545587938,platform_constant,4.175681545587938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171790,,,train,hesrt,samples/GSE203424/GSM6171790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171791,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2731,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,MONDO:0004975,luna,,tamoxifen,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.174543086023732,platform_constant,4.174543086023732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171791,,,train,hesrt,samples/GSE203424/GSM6171791,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6171792,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2416,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,MONDO:0004975,luna,,cornoil,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.969651893362377,platform_constant,3.969651893362377,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171792,,,train,hesrt,samples/GSE203424/GSM6171792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6171793,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2775,INPP5D limits plaque formation and glial reactivity in the APP/PS1 mouse model of Alzheimer’s disease,GSE203424,GSE203424,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,coronal brain section,MONDO:0004975,luna,,tamoxifen,age rule: age with unit,not stated,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.175681545587936,platform_constant,4.175681545587936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36448627,,GSM6171793,,,train,hesrt,samples/GSE203424/GSM6171793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6176208,brain,disease,primary central nervous system lymphoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1083,Intratumor heterogeneity and T cell exhaustion in primary CNS lymphoma,GSE203552,GSE203552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,biopsy tissue,MONDO:0002571,luna,PCNSL,,luna,not stated,,not stated,,GSE203552:p1,p1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.056116269325808,platform_constant,4.056116269325808,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36153593,,GSM6176208,,,test,hesrt,samples/GSE203552/GSM6176208,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6176213,brain,disease,primary central nervous system lymphoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,917,Intratumor heterogeneity and T cell exhaustion in primary CNS lymphoma,GSE203552,GSE203552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,biopsy tissue,MONDO:0002571,luna,PCNSL,,luna,not stated,,not stated,,GSE203552:p2,p2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.051561528603966,platform_constant,4.051561528603966,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36153593,,GSM6176213,,,test,hesrt,samples/GSE203552/GSM6176213,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6176214,brain,disease,primary central nervous system lymphoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1512,Intratumor heterogeneity and T cell exhaustion in primary CNS lymphoma,GSE203552,GSE203552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,biopsy tissue,MONDO:0002571,luna,PCNSL,,luna,not stated,,not stated,,GSE203552:p3,p3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.071299285740243,platform_constant,4.071299285740243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36153593,,GSM6176214,,,test,hesrt,samples/GSE203552/GSM6176214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6176215,brain,disease,primary central nervous system lymphoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1090,Intratumor heterogeneity and T cell exhaustion in primary CNS lymphoma,GSE203552,GSE203552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,biopsy tissue,MONDO:0002571,luna,PCNSL,,luna,not stated,,not stated,,GSE203552:p7,p7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0978693255259975,platform_constant,4.0978693255259975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36153593,,GSM6176215,,,test,hesrt,samples/GSE203552/GSM6176215,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6177599,breast,disease,breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2384,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0004989,luna,Breast carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.55487518674277,platform_constant,4.55487518674277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177599,,,train,hesrt,samples/GSE203612/GSM6177599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6177601,breast,disease,breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1863,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0004989,luna,Breast carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.15436199657636,platform_constant,4.15436199657636,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177601,,,train,hesrt,samples/GSE203612/GSM6177601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6177603,breast,disease,breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2346,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0004989,luna,Breast carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.061749972481647,platform_constant,4.061749972481647,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177603,,,train,hesrt,samples/GSE203612/GSM6177603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6177607,stomach,disease,cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2624,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Stomach,MONDO:0004992,luna,Gastric stromal tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.313965060578363,platform_constant,4.313965060578363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177607,,,train,hesrt,samples/GSE203612/GSM6177607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6177609,stomach,disease,cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2493,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Stomach,MONDO:0004992,luna,Gastric stromal tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.164773866085841,platform_constant,4.164773866085841,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177609,,,train,hesrt,samples/GSE203612/GSM6177609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6177612,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1661,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,Liver hepatocellular carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.2046119010610585,platform_constant,4.2046119010610585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177612,,,train,hesrt,samples/GSE203612/GSM6177612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6177614,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1762,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0005140,luna,Ovarian carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.448249773850994,platform_constant,4.448249773850994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177614,,,train,hesrt,samples/GSE203612/GSM6177614,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6177617,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1661,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0005140,luna,Ovarian carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.456444264891725,platform_constant,4.456444264891725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177617,,,train,hesrt,samples/GSE203612/GSM6177617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6177618,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1789,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.258897086980845,platform_constant,4.258897086980845,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177618,,,train,hesrt,samples/GSE203612/GSM6177618,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6177623,uterus,disease,endometrial carcinoma,endometrium,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1351,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001295,Endometrium,MONDO:0002447,luna,Endometrial carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.367445372552445,platform_constant,4.367445372552445,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177623,,,train,hesrt,samples/GSE203612/GSM6177623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6177624,other,disease,melanoma;cancer,,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3039,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Xenograft,MONDO:0005105;MONDO:0004992,luna,melanoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,41797,counts,pixel,4.168554277009604,platform_constant,4.168554277009604,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177624,,,train,hesrt,samples/GSE203612/GSM6177624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6177625,other,disease,melanoma;cancer,compound organ,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2556,Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment,GSE203612,GSE203612,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0003103,Xenograft,MONDO:0005105;MONDO:0004992,luna,melanoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,41797,counts,pixel,4.203667296842034,platform_constant,4.203667296842034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35931863,,GSM6177625,,,train,hesrt,samples/GSE203612/GSM6177625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.2, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6204635,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,DBiT-seq,DBiT-seq,False,,2387,Spatial epigenome-transcriptome co-profiling of mammalian tissues [RNA-Seq],GSE205054,GSE205054+GSE205055,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,19831,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6204635,,,train,sda-all,samples/GSE205054/GSM6204635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6204636,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,DBiT-seq,DBiT-seq,False,,2373,Spatial epigenome-transcriptome co-profiling of mammalian tissues [RNA-Seq],GSE205054,GSE205054+GSE205055,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,19859,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6204636,,,train,sda-all,samples/GSE205054/GSM6204636,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6204637,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,8886,Spatial epigenome-transcriptome co-profiling of mammalian tissues [RNA-Seq],GSE205054,GSE205054+GSE205055,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,luna,embryonic,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,21478,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6204637,,,train,sda-all,samples/GSE205054/GSM6204637,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6799937,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,2187,Spatial epigenome-transcriptome co-profiling of mammalian tissues [RNA-Seq],GSE205054,GSE205054+GSE205055,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,luna,embryonic,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,20900,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6799937,,,train,sda-all,samples/GSE205054/GSM6799937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6206885,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatial epigenome-transcriptome co-profiling of mammalian tissues,GSE205055,GSE205055,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002421,Human hippocampus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,29293,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6206885,,,train,sda-all,samples/GSE205055/GSM6206885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6753041,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,DBiT-seq,DBiT-seq,False,,2498,Spatial epigenome-transcriptome co-profiling of mammalian tissues,GSE205055,GSE205055,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,20046,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753041,,,train,sda-all,samples/GSE205055/GSM6753041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6753042,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,DBiT-seq,DBiT-seq,False,,2499,Spatial epigenome-transcriptome co-profiling of mammalian tissues,GSE205055,GSE205055,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,18718,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753042,,,train,sda-all,samples/GSE205055/GSM6753042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM6753043,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,DBiT-seq,DBiT-seq,False,,9215,Spatial epigenome-transcriptome co-profiling of mammalian tissues,GSE205055,GSE205055,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,juvenile,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,22914,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753043,,,train,sda-all,samples/GSE205055/GSM6753043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM6753044,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,DBiT-seq,DBiT-seq,False,,9752,Spatial epigenome-transcriptome co-profiling of mammalian tissues,GSE205055,GSE205055,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,juvenile,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,25881,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753044,,,train,sda-all,samples/GSE205055/GSM6753044,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 0.71}",,
GSM6753045,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,DBiT-seq,DBiT-seq,False,,9370,Spatial epigenome-transcriptome co-profiling of mammalian tissues,GSE205055,GSE205055,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,juvenile,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,23415,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753045,,,train,sda-all,samples/GSE205055/GSM6753045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM6753046,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,DBiT-seq,DBiT-seq,False,,9548,Spatial epigenome-transcriptome co-profiling of mammalian tissues,GSE205055,GSE205055,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,juvenile,,not stated,,,,fresh frozen,fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,22731,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36922587;39870864,,GSM6753046,,,train,sda-all,samples/GSE205055/GSM6753046,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.8}",,
GSM6210023,unknown,disease,cancer,,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2221,Single-cell RNA sequencing reveals myeloid and T cell co-stimulation mediated by IL-7 anti-cancer immunotherapy,GSE205307,GSE205307,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tissue specimen,MONDO:0004992,mondo_predicate,,Drug_Control (PBS),age rule: age with unit,juvenile,6–8 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.160651460412479,platform_constant,4.160651460412479,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38424167,10.1038/s41416-024-02617-7,GSM6210023,,,test,hesrt,samples/GSE205307/GSM6210023,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.73, ""disease_status"": 0.27, ""uberon"": NaN, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6210024,unknown,disease,cancer,,unknown,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1951,Single-cell RNA sequencing reveals myeloid and T cell co-stimulation mediated by IL-7 anti-cancer immunotherapy,GSE205307,GSE205307,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tissue specimen,MONDO:0004992,mondo_predicate (Luna: perturbation),,Drug_rIL7 (recombinant IL7),age rule: age with unit,juvenile,6–8 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.068724069995314,platform_constant,4.068724069995314,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38424167,10.1038/s41416-024-02617-7,GSM6210024,,,test,hesrt,samples/GSE205307/GSM6210024,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.88, ""uberon"": NaN, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6219587,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,False,,721,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001134,Skeletal Muscle,,luna,,PBS,luna,not stated,,extracted field,Female,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6219587,,,val,sda-all,samples/GSE205707/GSM6219587,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM6219588,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,False,,762,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001134,Skeletal Muscle,,luna,,PBS,luna,not stated,,extracted field,Female,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6219588,,,val,sda-all,samples/GSE205707/GSM6219588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6219589,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,False,,796,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001134,Skeletal Muscle,,luna,,PBS,luna,not stated,,extracted field,Male,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6219589,,,val,sda-all,samples/GSE205707/GSM6219589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM6219590,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,False,,660,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001134,Skeletal Muscle,,luna,,PBS,luna,not stated,,extracted field,Male,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6219590,,,val,sda-all,samples/GSE205707/GSM6219590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6219591,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,False,,866,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001134,Skeletal Muscle,,luna,,ITD1,luna,not stated,,extracted field,Female,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6219591,,,val,sda-all,samples/GSE205707/GSM6219591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM6219592,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,False,,654,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001134,Skeletal Muscle,,luna,,ITD1,luna,not stated,,extracted field,Female,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6219592,,,val,sda-all,samples/GSE205707/GSM6219592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM6219593,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,False,,633,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001134,Skeletal Muscle,,luna,,ITD1,luna,not stated,,extracted field,Male,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6219593,,,val,sda-all,samples/GSE205707/GSM6219593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6219594,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,False,,895,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001134,Skeletal Muscle,,luna,,ITD1,luna,not stated,,extracted field,Male,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6219594,,,val,sda-all,samples/GSE205707/GSM6219594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM6896311,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,708,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001134,Skeletal Muscle,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,0.5000062390298768,DEPOSITED_ALIGNMENT_FIT,,,,,VERIFIED,,,,,10.1172/jci.insight.162835,GSM6896311,,,val,sda-all,samples/GSE205707/GSM6896311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM6896312,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,569,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001134,Skeletal Muscle,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,0.5000068389065571,DEPOSITED_ALIGNMENT_FIT,,,,,VERIFIED,,,,,10.1172/jci.insight.162835,GSM6896312,,,val,sda-all,samples/GSE205707/GSM6896312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6896313,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,female,Visium,Visium,True,H&E,2432,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001134,Skeletal Muscle,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,0.4999913105374158,DEPOSITED_ALIGNMENT_FIT,,,,,VERIFIED,,,,,10.1172/jci.insight.162835,GSM6896313,,,val,sda-all,samples/GSE205707/GSM6896313,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.9400000000000001, ""life_stage"": 0.97}",,
GSM6896314,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,female,Visium,Visium,True,H&E,2600,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001134,Skeletal Muscle,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,0.4999971118002034,DEPOSITED_ALIGNMENT_FIT,,,,,VERIFIED,,,,,10.1172/jci.insight.162835,GSM6896314,,,val,sda-all,samples/GSE205707/GSM6896314,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.96, ""life_stage"": 0.97}",,
GSM6896315,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,female,Visium,Visium,True,H&E,3122,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001134,Skeletal Muscle,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,0.4999895398119399,DEPOSITED_ALIGNMENT_FIT,,,,,VERIFIED,,,,,10.1172/jci.insight.162835,GSM6896315,,,val,sda-all,samples/GSE205707/GSM6896315,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM6896316,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,female,Visium,Visium,True,H&E,3393,Spatiotemporal mapping of immune and stem cell dysregulation after volumetric muscle loss,GSE205707,GSE205707,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001134,Skeletal Muscle,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,0.4999965460677004,DEPOSITED_ALIGNMENT_FIT,,,,,VERIFIED,,,,,10.1172/jci.insight.162835,GSM6896316,,,val,sda-all,samples/GSE205707/GSM6896316,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.97, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6248646,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2021,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.252777902405432,platform_constant,4.252777902405432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248646,,,train,hesrt,samples/GSE206245/GSM6248646,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248647,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2614,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.053282778974647,platform_constant,4.053282778974647,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248647,,,train,hesrt,samples/GSE206245/GSM6248647,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248648,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1939,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.103030398712962,platform_constant,4.103030398712962,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248648,,,train,hesrt,samples/GSE206245/GSM6248648,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248649,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1209,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.2404042325791655,platform_constant,4.2404042325791655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248649,,,train,hesrt,samples/GSE206245/GSM6248649,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248650,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2602,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.239141434340923,platform_constant,4.239141434340923,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248650,,,train,hesrt,samples/GSE206245/GSM6248650,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248651,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1309,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.254545384362471,platform_constant,4.254545384362471,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248651,,,train,hesrt,samples/GSE206245/GSM6248651,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248652,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1272,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.254238790482051,platform_constant,4.254238790482051,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248652,,,train,hesrt,samples/GSE206245/GSM6248652,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248653,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3668,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.384673474017531,platform_constant,4.384673474017531,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248653,,,train,hesrt,samples/GSE206245/GSM6248653,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248654,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1556,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.345706991745568,platform_constant,4.345706991745568,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248654,,,train,hesrt,samples/GSE206245/GSM6248654,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248655,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2067,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.2980130430915064,platform_constant,4.2980130430915064,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248655,,,train,hesrt,samples/GSE206245/GSM6248655,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6248656,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1977,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.298013043091485,platform_constant,4.298013043091485,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248656,,,train,hesrt,samples/GSE206245/GSM6248656,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6248657,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1086,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.308618673066466,platform_constant,4.308618673066466,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM6248657,,,train,hesrt,samples/GSE206245/GSM6248657,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8361988,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,6053,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Spatial Transcriptomics,,,spot,30616,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,39231979,,GSM8361988,,,train,sda-all,samples/GSE206245/GSM8361988,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8361990,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,1722,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Spatial Transcriptomics,,,spot,30616,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,39231979,,GSM8361990,,,train,sda-all,samples/GSE206245/GSM8361990,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8361991,airway,disease,nasopharyngeal carcinoma,nasopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,1788,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001728,Nasopharynx,MONDO:0015459,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Spatial Transcriptomics,,,spot,30616,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,39231979,,GSM8361991,,,train,sda-all,samples/GSE206245/GSM8361991,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8361993,stomach,disease,gastric cancer;carcinoma,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3280,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Nasopharynx,MONDO:0001056;MONDO:0004993,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33592,counts,pixel,4.448844085519946,platform_constant,4.448844085519946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM8361993,,,train,hesrt,samples/GSE206245/GSM8361993,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 0.85, ""disease_status"": 0.92, ""uberon"": 0.64, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8361995,stomach,disease,gastric cancer;epithelial neoplasm,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4605,Single-Cell and Spatial Transcriptome Analyses Reveal Tertiary Lymphoid Structures Linked to Tumour Progression and Immunotherapy Response in Nasopharyngeal Carcinoma,GSE206245,GSE206245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Nasopharynx,MONDO:0001056;MONDO:0005626,luna,Nasopharyngeal carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33592,counts,pixel,4.456784047418568,platform_constant,4.456784047418568,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39231979,,GSM8361995,,,train,hesrt,samples/GSE206245/GSM8361995,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.93, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM6250307,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,2438,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,GSE206306,GSE206306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Reference,Reference,luna,not stated,,extracted field,female,GSE206306:20-0034,20-0034,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7591458644571283,platform_constant,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM6250307,,,train,hesrt,samples/GSE206306/GSM6250307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6250308,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,817,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,GSE206306,GSE206306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Calcium Oxalate,Calcium Oxalate,luna,not stated,,extracted field,female,GSE206306:KRP428,KRP428,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM6250308,,,train,hesrt,samples/GSE206306/GSM6250308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6250309,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,939,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,GSE206306,GSE206306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Calcium Oxalate,Calcium Oxalate,luna,not stated,,extracted field,female,GSE206306:KRP449,KRP449,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7575757575757576,platform_constant,0.7575757575757576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM6250309,,,train,hesrt,samples/GSE206306/GSM6250309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM6250310,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,mixed,Visium,Visium,True,H&E,1085,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,GSE206306,GSE206306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Calcium Oxalate,Calcium Oxalate,luna,not stated,,sample text,,GSE206306:KRP429,KRP429,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7591458644571283,platform_constant,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM6250310,,,train,hesrt,samples/GSE206306/GSM6250310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM7166168,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,mixed,Visium,Visium,True,H&E,656,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,GSE206306,GSE206306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Calcium Oxalate,Calcium Oxalate,luna,not stated,,sample text,,GSE206306:KRP446/KRP462/KRP475,KRP446/KRP462/KRP475,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7591458644571283,platform_constant,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM7166168,,,train,hesrt,samples/GSE206306/GSM7166168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7166169,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1386,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,GSE206306,GSE206306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Calcium Oxalate,Calcium Oxalate,luna,not stated,,extracted field,female,GSE206306:F59/F63,F59/F63,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7591458644571283,platform_constant,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM7166169,,,train,hesrt,samples/GSE206306/GSM7166169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 0.99}",,
GSM7166170,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,2468,A Spatial Transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease,GSE206306,GSE206306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,Calcium Oxalate,Calcium Oxalate,luna,not stated,,extracted field,male,GSE206306:M50,M50,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7591458644571283,platform_constant,0.7591458644571283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37468493,,GSM7166170,,,train,hesrt,samples/GSE206306/GSM7166170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM6256810,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3498,Spatial resolution of cellular senescence dynamics in colorectal liver metastasis,GSE206552,GSE206552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,CRLM,MONDO:1060297,luna,colorectal liver metastasis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.900073952828708,platform_constant,2.900073952828708,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37157887,,GSM6256810,,,train,hesrt,samples/GSE206552/GSM6256810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6256811,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3776,Spatial resolution of cellular senescence dynamics in colorectal liver metastasis,GSE206552,GSE206552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,CRLM,MONDO:1060297,luna,colorectal liver metastasis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.224129401095805,platform_constant,3.224129401095805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37157887,,GSM6256811,,,train,hesrt,samples/GSE206552/GSM6256811,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6256812,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1248,Spatial resolution of cellular senescence dynamics in colorectal liver metastasis,GSE206552,GSE206552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,CRLM,MONDO:1060297,luna,colorectal liver metastasis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.2376195411908806,platform_constant,3.2376195411908806,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37157887,,GSM6256812,,,train,hesrt,samples/GSE206552/GSM6256812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6256813,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1537,Spatial resolution of cellular senescence dynamics in colorectal liver metastasis,GSE206552,GSE206552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,CRLM,MONDO:1060297,luna,colorectal liver metastasis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.7896417632583534,platform_constant,2.7896417632583534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37157887,,GSM6256813,,,train,hesrt,samples/GSE206552/GSM6256813,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6258251,oral cavity,normal,,mouth mucosa,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,231,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,GSE206621,GSE206621,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003729,Oral mucosa,,luna,,Health,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.255000078249446,platform_constant,4.255000078249446,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258251,,,train,hesrt,samples/GSE206621/GSM6258251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6258252,oral cavity,normal,,mouth mucosa,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,284,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,GSE206621,GSE206621,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003729,Oral mucosa,,luna,,Health,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.186428528099037,platform_constant,4.186428528099037,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258252,,,train,hesrt,samples/GSE206621/GSM6258252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6258253,oral cavity,normal,,mouth mucosa,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,295,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,GSE206621,GSE206621,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003729,Oral mucosa,,luna,,Health,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.169999712687019,platform_constant,4.169999712687019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258253,,,train,hesrt,samples/GSE206621/GSM6258253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6258254,oral cavity,normal,,mouth mucosa,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,319,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,GSE206621,GSE206621,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003729,Oral mucosa,,luna,,Health,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.132857174184212,platform_constant,4.132857174184212,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258254,,,train,hesrt,samples/GSE206621/GSM6258254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6258255,oral cavity,normal,,mouth mucosa,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1088,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,GSE206621,GSE206621,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003729,Oral mucosa,,luna,,Health,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.095751771582672,platform_constant,4.095751771582672,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258255,,,train,hesrt,samples/GSE206621/GSM6258255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6258256,oral cavity,disease,inflammatory disease,mouth mucosa,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,415,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,GSE206621,GSE206621,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003729,Oral mucosa,MONDO:0021166,luna,periodontitis,disease,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.029768525983423,platform_constant,4.029768525983423,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258256,,,train,hesrt,samples/GSE206621/GSM6258256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6258257,oral cavity,disease,inflammatory disease,mouth mucosa,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,160,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,GSE206621,GSE206621,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003729,Oral mucosa,MONDO:0021166,luna,periodontitis,disease,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.005774593110275,platform_constant,4.005774593110275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258257,,,train,hesrt,samples/GSE206621/GSM6258257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6258258,oral cavity,disease,inflammatory disease,mouth mucosa,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,501,Mapping the Spatial Dynamics of the Human Oral Mucosa in Chronic Inflammatory Disease,GSE206621,GSE206621,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003729,Oral mucosa,MONDO:0021166,luna,periodontitis,disease,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.560032536233237,platform_constant,4.560032536233237,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36648332,,GSM6258258,,,train,hesrt,samples/GSE206621/GSM6258258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7898096,heart,normal,,cardiac ventricle,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,591,Spatiotemporal signaling underlies progressive vascular rarefaction in myocardial infarction,GSE206787,GSE206787,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002082,Heart ventricles collected at steady state,,luna,,steady state (undamaged),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,1.7155305995418189,platform_constant,1.7155305995418189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38129410,,GSM7898096,,,train,hesrt,samples/GSE206787/GSM7898096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.98, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM7898097,heart,disease,myocardial infarction,cardiac ventricle,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1068,Spatiotemporal signaling underlies progressive vascular rarefaction in myocardial infarction,GSE206787,GSE206787,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002082,Heart ventricles collected 3 days after MI,MONDO:0005068,luna,,3 days post-myocardial infarction,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,2.2461502606247286,platform_constant,2.2461502606247286,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38129410,,GSM7898097,,,train,hesrt,samples/GSE206787/GSM7898097,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.64}",,
GSM7898098,heart,disease,myocardial infarction,cardiac ventricle,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1245,Spatiotemporal signaling underlies progressive vascular rarefaction in myocardial infarction,GSE206787,GSE206787,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002082,Heart ventricles collected 7 days after MI,MONDO:0005068,luna,,7 days post-myocardial infarction,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,2.6507697959168484,platform_constant,2.6507697959168484,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38129410,,GSM7898098,,,train,hesrt,samples/GSE206787/GSM7898098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM7898099,heart,disease,myocardial infarction,cardiac ventricle,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,948,Spatiotemporal signaling underlies progressive vascular rarefaction in myocardial infarction,GSE206787,GSE206787,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002082,Heart ventricles collected 14 days after MI,MONDO:0005068,luna,,14 days post-myocardial infarction,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,2.0632701528265645,platform_constant,2.0632701528265645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38129410,,GSM7898099,,,train,hesrt,samples/GSE206787/GSM7898099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM7984884,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E-like (heuristic),1797,Profibrotic subsets of SPP1+ macrophages and POSTN+ fibroblasts contribute to fibrotic scarring in acne keloidalis,GSE206790,GSE206790,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,,,age rule: age in years,adult,40 years old,sample text,,,,,,release v3,sequencing-based,visium,,,spot,17943,counts,um,1.0,verified,4.166454279906858,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38218364,,GSM7984884,,,train,sda-all,samples/GSE206790/GSM7984884,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM6281320,thymus,normal,,thymus,primary tissue,Homo sapiens,human,neonatal or infant,male,Visium,Visium,True,H&E,2276,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],GSE207205,GSE207205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,thymus,,luna,,,luna,neonatal or infant,5 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.25531914893617,platform_constant,4.25531914893617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281320,,,train,hesrt,samples/GSE207205/GSM6281320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6281321,thymus,normal,,thymus,primary tissue,Homo sapiens,human,neonatal or infant,male,Visium,Visium,True,H&E,2594,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],GSE207205,GSE207205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,thymus,,luna,,,luna,neonatal or infant,10 days,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.103191478436959,platform_constant,4.103191478436959,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281321,,,train,hesrt,samples/GSE207205/GSM6281321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6281322,thymus,normal,,thymus,primary tissue,Homo sapiens,human,neonatal or infant,male,Visium,Visium,True,H&E,2269,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],GSE207205,GSE207205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,thymus,,luna,,,luna,neonatal or infant,4 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.101702198208847,platform_constant,4.101702198208847,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281322,,,train,hesrt,samples/GSE207205/GSM6281322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6281323,thymus,normal,,thymus,primary tissue,Homo sapiens,human,neonatal or infant,female,Visium,Visium,True,H&E,2582,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],GSE207205,GSE207205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,thymus,,luna,,,luna,neonatal or infant,9 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.103829801121403,platform_constant,4.103829801121403,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281323,,,train,hesrt,samples/GSE207205/GSM6281323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6281324,thymus,normal,,thymus,primary tissue,Homo sapiens,human,neonatal or infant,male,Visium,Visium,True,H&E,2515,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],GSE207205,GSE207205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,thymus,,luna,,,luna,neonatal or infant,5.5 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.118898935904241,platform_constant,4.118898935904241,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281324,,,train,hesrt,samples/GSE207205/GSM6281324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM6281325,thymus,normal,,thymus,primary tissue,Homo sapiens,human,neonatal or infant,male,Visium,Visium,True,H&E,1623,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],GSE207205,GSE207205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,thymus,,luna,,,luna,neonatal or infant,5 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.222302330002272,platform_constant,4.222302330002272,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281325,,,train,hesrt,samples/GSE207205/GSM6281325,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6281326,thymus,normal,,thymus,primary tissue,Homo sapiens,human,neonatal or infant,female,Visium,Visium,True,H&E,2227,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],GSE207205,GSE207205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,thymus,,luna,,,luna,neonatal or infant,5.5 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.122371413357612,platform_constant,4.122371413357612,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281326,,,train,hesrt,samples/GSE207205/GSM6281326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6281327,thymus,normal,,thymus,primary tissue,Homo sapiens,human,juvenile,female,Visium,Visium,True,H&E,2243,Multimodal human thymic profiling reveals trajectories and cellular milieu for T agonist selection [Spatial transcriptomics],GSE207205,GSE207205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,thymus,,luna,,,luna,juvenile,12 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.118898935904241,platform_constant,4.118898935904241,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36741401,,GSM6281327,,,train,hesrt,samples/GSE207205/GSM6281327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM6294362,brain,disease,neoplasm;hydrocephalus,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),3417,Choroid plexus mast cells drive tumor-associated hydrocephalus,GSE207546,GSE207546,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain section,MONDO:0005070;MONDO:0001150,luna,,mice injected EO771-VM cells,age rule: age with unit,adult,9-12 weeks,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,25636,counts,um,1.0,verified,4.980984031467139,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38056463,,GSM6294362,,,train,sda-all,samples/GSE207546/GSM6294362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6294363,brain,disease,neoplasm;hydrocephalus,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),4156,Choroid plexus mast cells drive tumor-associated hydrocephalus,GSE207546,GSE207546,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain section,MONDO:0005070;MONDO:0001150,luna,,mice injected EO771-VM cells,age rule: age with unit,adult,9-12 weeks,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,25636,counts,um,1.0,verified,5.681393823040841,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38056463,,GSM6294363,,,train,sda-all,samples/GSE207546/GSM6294363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6294364,brain,disease,neoplasm;hydrocephalus,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),3201,Choroid plexus mast cells drive tumor-associated hydrocephalus,GSE207546,GSE207546,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain section,MONDO:0005070;MONDO:0001150,luna,,mice injected EO771-VM cells,age rule: age with unit,adult,9-12 weeks,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,25636,counts,um,1.0,verified,4.981471801063524,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38056463,,GSM6294364,,,train,sda-all,samples/GSE207546/GSM6294364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6320933,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1218,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,39844,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320933,,,train,sda-all,samples/GSE207843/GSM6320933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320934,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1291,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,40955,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320934,,,train,sda-all,samples/GSE207843/GSM6320934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6320935,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1293,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,30799,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320935,,,train,sda-all,samples/GSE207843/GSM6320935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6320936,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1296,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,32266,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320936,,,train,sda-all,samples/GSE207843/GSM6320936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6320937,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1295,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,33955,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320937,,,train,sda-all,samples/GSE207843/GSM6320937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320938,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1291,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,35797,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320938,,,train,sda-all,samples/GSE207843/GSM6320938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320939,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1292,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,37347,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320939,,,train,sda-all,samples/GSE207843/GSM6320939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320940,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1271,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,35543,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320940,,,train,sda-all,samples/GSE207843/GSM6320940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320941,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1285,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,34211,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320941,,,train,sda-all,samples/GSE207843/GSM6320941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320942,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1296,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,28529,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320942,,,train,sda-all,samples/GSE207843/GSM6320942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320943,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1296,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,29475,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320943,,,train,sda-all,samples/GSE207843/GSM6320943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6320944,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1295,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,27473,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320944,,,train,sda-all,samples/GSE207843/GSM6320944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320945,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1296,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,32114,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320945,,,train,sda-all,samples/GSE207843/GSM6320945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320946,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1293,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,32898,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320946,,,train,sda-all,samples/GSE207843/GSM6320946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6320947,brain,normal,,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1296,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002037,Cerebellum,,luna,,wild-type,age rule: age with unit,adult,4 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,32224,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320947,,,train,sda-all,samples/GSE207843/GSM6320947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6320948,brain,normal,,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1296,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002037,Cerebellum,,luna,,wild-type,age rule: age with unit,adult,4 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,33382,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6320948,,,train,sda-all,samples/GSE207843/GSM6320948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6934374,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1214,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001264,Pancreas,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,21748,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6934374,,,train,sda-all,samples/GSE207843/GSM6934374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6934375,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,DBiT-seq,DBiT-seq,False,,1258,Spatial Transcriptomics Using Multiplexed Deterministic Barcoding in Tissue,GSE207843,GSE207843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001264,Pancreas,,luna,,wild-type,age rule: age with unit,adult,3 months,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,23305,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36934108,,GSM6934375,,,train,sda-all,samples/GSE207843/GSM6934375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6339631,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1185,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage IVA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9624329632594413,platform_constant,3.9624329632594413,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339631,,,train,hesrt,samples/GSE208253/GSM6339631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339632,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1836,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage IVA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9191809966305695,platform_constant,3.9191809966305695,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339632,,,train,hesrt,samples/GSE208253/GSM6339632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339633,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,969,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage I,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.017586325254635,platform_constant,4.017586325254635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339633,,,train,hesrt,samples/GSE208253/GSM6339633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6339634,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2046,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage IVA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.069213646029788,platform_constant,4.069213646029788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339634,,,train,hesrt,samples/GSE208253/GSM6339634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6339635,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1678,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage II,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.974655371544023,platform_constant,3.974655371544023,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339635,,,train,hesrt,samples/GSE208253/GSM6339635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339636,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3311,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage II,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9094500222848416,platform_constant,3.9094500222848416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339636,,,train,hesrt,samples/GSE208253/GSM6339636,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339637,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2860,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage IVA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.960285912011091,platform_constant,3.960285912011091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339637,,,train,hesrt,samples/GSE208253/GSM6339637,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6339638,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2475,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage IVA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.935789692366815,platform_constant,3.935789692366815,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339638,,,train,hesrt,samples/GSE208253/GSM6339638,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6339639,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3591,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage IVA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.945305172878076,platform_constant,3.945305172878076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339639,,,train,hesrt,samples/GSE208253/GSM6339639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339640,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2731,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage IVA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.02637938825526,platform_constant,4.02637938825526,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339640,,,train,hesrt,samples/GSE208253/GSM6339640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6339641,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2130,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage II,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.948793040626919,platform_constant,3.948793040626919,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339641,,,train,hesrt,samples/GSE208253/GSM6339641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6339642,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1559,Spatial transcriptomics reveals distinct and conserved tumor core and edge architectures that predict survival and targeted therapy response,GSE208253,GSE208253,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral squamous cell carcinoma (OSCC),MONDO:0004958,luna,oral squamous cell carcinoma,Stage IVA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.014335855359846,platform_constant,4.014335855359846,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37596273,,GSM6339642,,,train,hesrt,samples/GSE208253/GSM6339642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6368793,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2961,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.525930943358646,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368793,,,test,sda-all,samples/GSE208747/GSM6368793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368794,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4789,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.034779295797065,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368794,,,test,sda-all,samples/GSE208747/GSM6368794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368795,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3627,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.027825165710968,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368795,,,test,sda-all,samples/GSE208747/GSM6368795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368796,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4729,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.0348852214384845,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368796,,,test,sda-all,samples/GSE208747/GSM6368796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368797,brain,normal,,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3550,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,,luna,non-demented control,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.5302386352524096,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368797,,,test,sda-all,samples/GSE208747/GSM6368797,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM6368798,brain,normal,,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3067,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,,luna,non-demented control,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.512060788727136,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368798,,,test,sda-all,samples/GSE208747/GSM6368798,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6368799,brain,normal,,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3225,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,,luna,non-demented control,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.9594031619862844,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368799,,,test,sda-all,samples/GSE208747/GSM6368799,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6368800,brain,normal,,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3459,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,,luna,non-demented control,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.2777824720836515,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368800,,,test,sda-all,samples/GSE208747/GSM6368800,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6368801,brain,normal,,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4831,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,,luna,non-demented control,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.09535203738447,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),,39501035,,GSM6368801,,,test,sda-all,samples/GSE208747/GSM6368801,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6368804,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4208,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.031362843937651,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),,39501035,,GSM6368804,,,test,sda-all,samples/GSE208747/GSM6368804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368805,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3649,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.032304692785461,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368805,,,test,sda-all,samples/GSE208747/GSM6368805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368806,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3657,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.932381323518317,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368806,,,test,sda-all,samples/GSE208747/GSM6368806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368807,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4702,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.9291674786054585,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368807,,,test,sda-all,samples/GSE208747/GSM6368807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368808,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4895,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.930000258763079,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368808,,,test,sda-all,samples/GSE208747/GSM6368808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368809,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3751,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.9339635109136744,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368809,,,test,sda-all,samples/GSE208747/GSM6368809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368810,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4284,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.513088840688379,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368810,,,test,sda-all,samples/GSE208747/GSM6368810,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368811,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4436,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.549125043895784,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368811,,,test,sda-all,samples/GSE208747/GSM6368811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368812,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3797,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002316,white matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.544577536939472,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368812,,,test,sda-all,samples/GSE208747/GSM6368812,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368813,brain,disease,multiple sclerosis,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3596,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.235108241841879,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368813,,,test,sda-all,samples/GSE208747/GSM6368813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6368814,brain,disease,multiple sclerosis,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3068,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.9964738927139516,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368814,,,test,sda-all,samples/GSE208747/GSM6368814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6368815,brain,disease,multiple sclerosis,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4549,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.097341705678958,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368815,,,test,sda-all,samples/GSE208747/GSM6368815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6368818,brain,disease,multiple sclerosis,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3167,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.091825332237767,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368818,,,test,sda-all,samples/GSE208747/GSM6368818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6368819,brain,disease,multiple sclerosis,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4673,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.293364886308768,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368819,,,test,sda-all,samples/GSE208747/GSM6368819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6368820,brain,disease,multiple sclerosis,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3566,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.097675497251554,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368820,,,test,sda-all,samples/GSE208747/GSM6368820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6368821,brain,disease,multiple sclerosis,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4325,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.245251320048181,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368821,,,test,sda-all,samples/GSE208747/GSM6368821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6368822,brain,disease,multiple sclerosis,gray matter,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4624,Decoding spatial gene activity changes in multiple sclerosis lesion progression,GSE208747,GSE208747,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002020,grey matter,MONDO:0005301,luna,multiple sclerosis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.034032437924282,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39501035,,GSM6368822,,,test,sda-all,samples/GSE208747/GSM6368822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6380080,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2380,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,5XFAD,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.78676963678303,platform_constant,4.78676963678303,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380080,,,train,hesrt,samples/GSE209583/GSM6380080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6380081,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2171,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,5XFAD,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.762746432183831,platform_constant,4.762746432183831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380081,,,train,hesrt,samples/GSE209583/GSM6380081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380082,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1794,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,wild type,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.660988782478543,platform_constant,4.660988782478543,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380082,,,train,hesrt,samples/GSE209583/GSM6380082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6380083,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2410,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,wild type,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.6931421399874935,platform_constant,4.6931421399874935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380083,,,train,hesrt,samples/GSE209583/GSM6380083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6380084,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2484,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,vehicle,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.03959675118028,platform_constant,5.03959675118028,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380084,,,train,hesrt,samples/GSE209583/GSM6380084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6380085,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2732,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,vehicle,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.691082141053782,platform_constant,4.691082141053782,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380085,,,train,hesrt,samples/GSE209583/GSM6380085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6380086,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2936,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,hNSC,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.928588375678347,platform_constant,4.928588375678347,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380086,,,train,hesrt,samples/GSE209583/GSM6380086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380087,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2459,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,hNSC,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.683960986500182,platform_constant,4.683960986500182,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380087,,,train,hesrt,samples/GSE209583/GSM6380087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380088,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1661,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,hNSC,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.695656923966957,platform_constant,4.695656923966957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380088,,,train,hesrt,samples/GSE209583/GSM6380088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380089,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1854,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,hNSC,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.63290131041097,platform_constant,4.63290131041097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380089,,,train,hesrt,samples/GSE209583/GSM6380089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380090,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1723,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,hNSC,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.573605609315817,platform_constant,4.573605609315817,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380090,,,train,hesrt,samples/GSE209583/GSM6380090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6380091,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1513,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,hNSC,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.765027748371623,platform_constant,4.765027748371623,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380091,,,train,hesrt,samples/GSE209583/GSM6380091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380092,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2345,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,5XFAD,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.756699469020538,platform_constant,4.756699469020538,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380092,,,train,hesrt,samples/GSE209583/GSM6380092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6380093,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2287,"Spatial transcriptomics analysis of wild type, 5XFAD mice, 5XFAD mice treated with either vehicle or human neural stem cells (hNSC)",GSE209583,GSE209583,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,5XFAD,age rule: age with unit,adult,41 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.7483768406641,platform_constant,4.7483768406641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38155736,,GSM6380093,,,train,hesrt,samples/GSE209583/GSM6380093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6415705,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3199,Mesenchymal-like tumor cells and myofibroblastic cancer-associated fibroblasts are associated with progression and immunotherapy response of clear-cell renal cell carcinoma [spatial transcriptomics],GSE210041,GSE210041+GSE210042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005005,luna,clear-cell renal cell carcinoma,Tumour,luna,not stated,,not stated,,GSE210041:Patient 1,Patient 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.660426103030553,platform_constant,4.660426103030553,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37335139,,GSM6415705,,,train,hesrt,samples/GSE210041/GSM6415705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6415706,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3880,Mesenchymal-like tumor cells and myofibroblastic cancer-associated fibroblasts are associated with progression and immunotherapy response of clear-cell renal cell carcinoma [spatial transcriptomics],GSE210041,GSE210041+GSE210042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005005,luna,clear-cell renal cell carcinoma,Tumour,luna,not stated,,not stated,,GSE210041:Patient 7,Patient 7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.6590739100801875,platform_constant,4.6590739100801875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37335139,,GSM6415706,,,train,hesrt,samples/GSE210041/GSM6415706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6429503,eye,normal,,lacrimal gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1135,Visium spatial transcriptomics analysis of lacrimal gland during chronic inflammation progression.,GSE210380,GSE210380,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001817,Lacrimal Gland,,luna,,control,age rule: age with unit,adult,4 months,extracted field,male,GSE210380:BALB/cJ,BALB/cJ,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7518796992481203,platform_constant,0.7518796992481203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36341342,,GSM6429503,,,train,hesrt,samples/GSE210380/GSM6429503,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6429504,eye,normal,,lacrimal gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1106,Visium spatial transcriptomics analysis of lacrimal gland during chronic inflammation progression.,GSE210380,GSE210380,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001817,Lacrimal Gland,,luna,,control,age rule: age with unit,adult,4 months,extracted field,male,GSE210380:BALB/cJ,BALB/cJ,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7541855601681494,platform_constant,0.7541855601681494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36341342,,GSM6429504,,,train,hesrt,samples/GSE210380/GSM6429504,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6429505,eye,disease,,lacrimal gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1530,Visium spatial transcriptomics analysis of lacrimal gland during chronic inflammation progression.,GSE210380,GSE210380,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0001817,Lacrimal Gland,,luna,,disease,age rule: age with unit,adult,4 months,extracted field,male,GSE210380:NOD.B10Sn-H2b/J,NOD.B10Sn-H2b/J,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7541855601681494,platform_constant,0.7541855601681494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36341342,,GSM6429505,,,train,hesrt,samples/GSE210380/GSM6429505,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6429506,eye,disease,,lacrimal gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1505,Visium spatial transcriptomics analysis of lacrimal gland during chronic inflammation progression.,GSE210380,GSE210380,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0001817,Lacrimal Gland,,luna,,disease,age rule: age with unit,adult,4 months,extracted field,male,GSE210380:NOD.B10Sn-H2b/J,NOD.B10Sn-H2b/J,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7541855601681494,platform_constant,0.7541855601681494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36341342,,GSM6429506,,,train,hesrt,samples/GSE210380/GSM6429506,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6433585,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1289,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.44052863436123346,platform_constant,0.49998633717128693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433585,,,train,hesrt,samples/GSE210616/GSM6433585,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433586,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1376,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.44052863436123346,platform_constant,0.49998633717128693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433586,,,train,hesrt,samples/GSE210616/GSM6433586,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433587,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1654,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.44051153707665197,platform_constant,0.5000022365065548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433587,,,train,hesrt,samples/GSE210616/GSM6433587,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6433588,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1178,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.44051153707665197,platform_constant,0.5000022365065548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433588,,,train,hesrt,samples/GSE210616/GSM6433588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433589,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2117,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.44051153707665197,platform_constant,0.5000022365065548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433589,,,train,hesrt,samples/GSE210616/GSM6433589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433590,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1532,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.44052863436123346,platform_constant,0.5000080575573295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433590,,,train,hesrt,samples/GSE210616/GSM6433590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433591,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,772,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4065040650406504,platform_constant,0.4999878313627299,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433591,,,train,hesrt,samples/GSE210616/GSM6433591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433592,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1325,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4065040650406504,platform_constant,0.5000023869880508,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433592,,,train,hesrt,samples/GSE210616/GSM6433592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433593,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1542,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4065040650406504,platform_constant,0.5000078775231349,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433593,,,train,hesrt,samples/GSE210616/GSM6433593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433594,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1391,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4065040650406504,platform_constant,0.5000062032548955,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433594,,,train,hesrt,samples/GSE210616/GSM6433594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433595,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1264,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.40650070643278524,platform_constant,0.5000042110552312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433595,,,train,hesrt,samples/GSE210616/GSM6433595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433596,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1167,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.40650070643278524,platform_constant,0.49999300690312776,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433596,,,train,hesrt,samples/GSE210616/GSM6433596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433597,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1109,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.32361781685513175,platform_constant,0.49999759287010903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433597,,,train,hesrt,samples/GSE210616/GSM6433597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433598,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1058,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3246736134215414,platform_constant,0.49998901830379017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433598,,,train,hesrt,samples/GSE210616/GSM6433598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433599,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1949,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.32573117099222815,platform_constant,0.49998427639879284,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433599,,,train,hesrt,samples/GSE210616/GSM6433599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433600,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,754,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.32361781685513175,platform_constant,0.4999947298999704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433600,,,train,hesrt,samples/GSE210616/GSM6433600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433601,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1593,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3225806451612903,platform_constant,0.5000041795885612,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433601,,,train,hesrt,samples/GSE210616/GSM6433601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433602,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1554,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3236229007757908,platform_constant,0.5000040745043717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433602,,,train,hesrt,samples/GSE210616/GSM6433602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433603,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1127,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.32257896681515275,platform_constant,0.49999429545022933,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433603,,,train,hesrt,samples/GSE210616/GSM6433603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433604,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1111,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.32257896681515275,platform_constant,0.5000150280961682,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433604,,,train,hesrt,samples/GSE210616/GSM6433604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433605,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,558,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3236229007757908,platform_constant,0.5000131850289173,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433605,,,train,hesrt,samples/GSE210616/GSM6433605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6433606,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,850,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3278670902111847,platform_constant,0.4999967851492875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433606,,,train,hesrt,samples/GSE210616/GSM6433606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433607,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2088,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.32361781685513175,platform_constant,0.4999922437088907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433607,,,train,hesrt,samples/GSE210616/GSM6433607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433608,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3116,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3236229007757908,platform_constant,0.4999886016326645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433608,,,train,hesrt,samples/GSE210616/GSM6433608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433609,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1518,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.32361781685513175,platform_constant,0.5000022285511696,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433609,,,train,hesrt,samples/GSE210616/GSM6433609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6433610,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1511,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3236229007757908,platform_constant,0.5000021819866903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433610,,,train,hesrt,samples/GSE210616/GSM6433610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433611,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1359,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3246684798225369,platform_constant,0.5000002728909335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433611,,,train,hesrt,samples/GSE210616/GSM6433611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433612,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,844,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.32257896681515275,platform_constant,0.4999890459232274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433612,,,train,hesrt,samples/GSE210616/GSM6433612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433613,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1868,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4329004329004329,platform_constant,0.5000113193024291,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433613,,,train,hesrt,samples/GSE210616/GSM6433613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433614,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1199,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4329004329004329,platform_constant,0.5000078031825909,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433614,,,train,hesrt,samples/GSE210616/GSM6433614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433615,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1048,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4329004329004329,platform_constant,0.5000134628687788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433615,,,train,hesrt,samples/GSE210616/GSM6433615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433616,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,921,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4329004329004329,platform_constant,0.5,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433616,,,train,hesrt,samples/GSE210616/GSM6433616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433617,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,554,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4329004329004329,platform_constant,0.5000053653999581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433617,,,train,hesrt,samples/GSE210616/GSM6433617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433618,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2207,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4329004329004329,platform_constant,0.49998903698618435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433618,,,train,hesrt,samples/GSE210616/GSM6433618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433619,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2196,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4329004329004329,platform_constant,0.500014239316795,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433619,,,train,hesrt,samples/GSE210616/GSM6433619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433620,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,926,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4328963766201112,platform_constant,0.5000144166705731,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433620,,,train,hesrt,samples/GSE210616/GSM6433620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433621,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,821,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4328963766201112,platform_constant,0.4999908808805768,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433621,,,train,hesrt,samples/GSE210616/GSM6433621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433622,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1298,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4328963766201112,platform_constant,0.4999916354150918,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433622,,,train,hesrt,samples/GSE210616/GSM6433622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433623,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,901,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4328963766201112,platform_constant,0.49998592296741706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433623,,,train,hesrt,samples/GSE210616/GSM6433623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6433624,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1266,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4329004329004329,platform_constant,0.5000136684280129,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433624,,,train,hesrt,samples/GSE210616/GSM6433624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6433625,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,635,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4328963766201112,platform_constant,0.5000107334980887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433625,,,train,hesrt,samples/GSE210616/GSM6433625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433626,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,897,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4329004329004329,platform_constant,0.5000101643385312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433626,,,train,hesrt,samples/GSE210616/GSM6433626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6433627,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1124,Spatial transcriptomics of triple negative breast cancer,GSE210616,GSE210616,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,TNBC tumor tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4329004329004329,platform_constant,0.5000097805103019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36283023,,GSM6433627,,,train,hesrt,samples/GSE210616/GSM6433627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6433926,bone,disease,,tibia,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,818,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",GSE210637,GSE210637,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000979,tibia,,luna,,Het G610C,age rule: age with unit,juvenile,4.5 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,2.3255813953488373,platform_constant,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433926,,,val,hesrt,samples/GSE210637/GSM6433926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6433927,bone,disease,,tibia,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2814,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",GSE210637,GSE210637,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000979,tibia,,luna,,Het G610C,age rule: age with unit,juvenile,4.5 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,2.3255813953488373,platform_constant,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433927,,,val,hesrt,samples/GSE210637/GSM6433927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM6433928,bone,perturbation,,tibia,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2213,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",GSE210637,GSE210637,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000979,tibia,,luna,,WT,age rule: age with unit,juvenile,4.5 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,2.3255813953488373,platform_constant,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433928,,,val,hesrt,samples/GSE210637/GSM6433928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6433929,bone,perturbation,,tibia,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2258,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",GSE210637,GSE210637,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000979,tibia,,luna,,WT,age rule: age with unit,juvenile,4.5 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,2.3255813953488373,platform_constant,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433929,,,val,hesrt,samples/GSE210637/GSM6433929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6433930,bone,disease,,tibia,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2689,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",GSE210637,GSE210637,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000979,tibia,,luna,,Het G610C,age rule: age with unit,juvenile,4.5 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,2.3255813953488373,platform_constant,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433930,,,val,hesrt,samples/GSE210637/GSM6433930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.62, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6433931,bone,perturbation,,tibia,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2211,"ER, mitochondria and ISR regulation by mt-HSP70 and ATF5 upon procollagen misfolding (proximal tibia srRNASeq)",GSE210637,GSE210637,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000979,tibia,,luna,,WT,age rule: age with unit,juvenile,4.5 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,2.3255813953488373,platform_constant,2.3255813953488373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,35988140,,GSM6433931,,,val,hesrt,samples/GSE210637/GSM6433931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6436178,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,535,Spatial transcriptomics revealing host-microbe interactions,GSE210738,GSE210738,10090,Mus musculus,10090,,False,False,GEO organism is a metagenome label; host species given,"Mus musculus
mouse gut metagenome",,luna,UBERON:0002108,small intestine,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6436178,,,test,sda-all,samples/GSE210738/GSM6436178,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6436179,colon,normal,,large intestine,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,641,Spatial transcriptomics revealing host-microbe interactions,GSE210738,GSE210738,10090,Mus musculus,10090,,False,False,GEO organism is a metagenome label; host species given,"Mus musculus
mouse gut metagenome",,luna,UBERON:0000059,large intestine,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6436179,,,test,sda-all,samples/GSE210738/GSM6436179,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6436954,skeletal muscle,perturbation,,supraspinatus muscle,primary tissue,Oryctolagus cuniculus,rabbit,not stated,unknown,Visium,Visium,True,H&E,854,Spatial transcriptomics tools allow for regional exploration of heterogeneous muscle pathology in the pre-clinical rabbit model of rotator cuff tear,GSE210773,GSE210773,9986,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,luna,UBERON:0002383,M. supraspinatus,,luna,,"Harvested and snapfrozen at 2w after tenotomy; muscle, 2 weeks tenotomy, stored 6 years",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21139,counts,pixel,0.49958658728879574,platform_constant,0.49958658728879574,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36195913,10.1186/s13018-022-03326-8,GSM6436954,,,train,hesrt,samples/GSE210773/GSM6436954,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6436955,skeletal muscle,disease,,supraspinatus muscle,primary tissue,Oryctolagus cuniculus,rabbit,not stated,unknown,Visium,Visium,True,H&E,1726,Spatial transcriptomics tools allow for regional exploration of heterogeneous muscle pathology in the pre-clinical rabbit model of rotator cuff tear,GSE210773,GSE210773,9986,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,luna,UBERON:0002383,M. supraspinatus,,luna,,"Harvested and snapfrozen at 16w after tenotomy; muscle, 16 weeks tenotomy, stored 6 years",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21139,counts,pixel,0.5000970529380039,platform_constant,0.5000970529380039,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36195913,10.1186/s13018-022-03326-8,GSM6436955,,,train,hesrt,samples/GSE210773/GSM6436955,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 0.59}",disease_status;life_stage,low_confidence_annotation
GSM6436956,skeletal muscle,normal,,supraspinatus muscle,primary tissue,Oryctolagus cuniculus,rabbit,not stated,unknown,Visium,Visium,True,H&E,2440,Spatial transcriptomics tools allow for regional exploration of heterogeneous muscle pathology in the pre-clinical rabbit model of rotator cuff tear,GSE210773,GSE210773,9986,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,luna,UBERON:0002383,M. supraspinatus,,luna,,"Harvested and snapfrozen; muscle, healthy, stored 6 years",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21139,counts,pixel,0.4988068339141743,platform_constant,0.4999848736710878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36195913,10.1186/s13018-022-03326-8,GSM6436956,,,train,hesrt,samples/GSE210773/GSM6436956,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6436957,skeletal muscle,normal,,supraspinatus muscle,primary tissue,Oryctolagus cuniculus,rabbit,not stated,unknown,Visium,Visium,True,H&E,1950,Spatial transcriptomics tools allow for regional exploration of heterogeneous muscle pathology in the pre-clinical rabbit model of rotator cuff tear,GSE210773,GSE210773,9986,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,luna,UBERON:0002383,M. supraspinatus,,luna,,"Harvested and snapfrozen; muscle, healthy, fresh",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21139,counts,pixel,0.4995049361864149,platform_constant,0.4995049361864149,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36195913,10.1186/s13018-022-03326-8,GSM6436957,,,train,hesrt,samples/GSE210773/GSM6436957,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM7431715,kidney,disease,diabetic kidney disease,kidney,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2970,Spatially resolved human kidney multi-omics single cell atlas highlights the key role of fibrotic microenvironment in kidney disease progression.,GSE211785,GSE211785,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,adult kidney,MONDO:0005016,luna,DKD,,age rule: bare number read as years,aged,79,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,12511,counts,pixel,0.7549817435426265,platform_constant,0.7549817435426265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38217002;38514613;39048792;40796935;41376591,,GSM7431715,,,train,hesrt,samples/GSE211785/GSM7431715,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7431716,kidney,disease,diabetic kidney disease,kidney,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2960,Spatially resolved human kidney multi-omics single cell atlas highlights the key role of fibrotic microenvironment in kidney disease progression.,GSE211785,GSE211785,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,adult kidney,MONDO:0005016,luna,DKD,,age rule: bare number read as years,adult,33,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,12511,counts,pixel,0.7519003849398638,platform_constant,0.7519003849398638,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38217002;38514613;39048792;40796935;41376591,,GSM7431716,,,train,hesrt,samples/GSE211785/GSM7431716,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7431719,kidney,disease,chronic kidney disease,kidney,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3028,Spatially resolved human kidney multi-omics single cell atlas highlights the key role of fibrotic microenvironment in kidney disease progression.,GSE211785,GSE211785,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,adult kidney,MONDO:0005300,luna,CKD,,age rule: bare number read as years,aged,66,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,12511,counts,pixel,0.7525704393903985,platform_constant,0.7525704393903985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38217002;38514613;39048792;40796935;41376591,,GSM7431719,,,train,hesrt,samples/GSE211785/GSM7431719,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM7431720,kidney,disease,diabetic kidney disease,kidney,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3903,Spatially resolved human kidney multi-omics single cell atlas highlights the key role of fibrotic microenvironment in kidney disease progression.,GSE211785,GSE211785,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,adult kidney,MONDO:0005016,luna,DKD,,age rule: bare number read as years,aged,74,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,12511,counts,pixel,0.752301604154569,platform_constant,0.752301604154569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38217002;38514613;39048792;40796935;41376591,,GSM7431720,,,train,hesrt,samples/GSE211785/GSM7431720,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6505118,colon,not stated,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1428,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.428146224676288,platform_constant,4.428146224676288,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505118,,,val,hesrt,samples/GSE211895/GSM6505118,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505119,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1375,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.429283801020672,platform_constant,4.429283801020672,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505119,,,val,hesrt,samples/GSE211895/GSM6505119,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505120,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1453,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.427719336245308,platform_constant,4.427719336245308,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505120,,,val,hesrt,samples/GSE211895/GSM6505120,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505121,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1416,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.428359217230713,platform_constant,4.428359217230713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505121,,,val,hesrt,samples/GSE211895/GSM6505121,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505122,colon,not stated,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1393,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.5372638662565965,platform_constant,4.5372638662565965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505122,,,val,hesrt,samples/GSE211895/GSM6505122,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505123,colon,not stated,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1138,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.317708326371092,platform_constant,4.317708326371092,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505123,,,val,hesrt,samples/GSE211895/GSM6505123,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505124,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1150,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.5444067967785955,platform_constant,4.5444067967785955,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505124,,,val,hesrt,samples/GSE211895/GSM6505124,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505125,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1302,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.319283506064885,platform_constant,4.319283506064885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505125,,,val,hesrt,samples/GSE211895/GSM6505125,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6505126,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1286,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.538143240260036,platform_constant,4.538143240260036,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505126,,,val,hesrt,samples/GSE211895/GSM6505126,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6505127,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1372,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.535505953053912,platform_constant,4.535505953053912,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505127,,,val,hesrt,samples/GSE211895/GSM6505127,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505128,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1124,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.543527623963291,platform_constant,4.543527623963291,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505128,,,val,hesrt,samples/GSE211895/GSM6505128,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505129,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1276,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.338444530757783,platform_constant,4.338444530757783,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505129,,,val,hesrt,samples/GSE211895/GSM6505129,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505130,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1345,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.337778048455116,platform_constant,4.337778048455116,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505130,,,val,hesrt,samples/GSE211895/GSM6505130,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505131,colon,not stated,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1299,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.336888736403853,platform_constant,4.336888736403853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505131,,,val,hesrt,samples/GSE211895/GSM6505131,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505132,colon,normal,,colon,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1388,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001155,colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.339333210031179,platform_constant,4.339333210031179,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505132,,,val,hesrt,samples/GSE211895/GSM6505132,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6505133,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2204,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18035,counts,pixel,4.263711262769721,platform_constant,4.263711262769721,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,SS-GSM6505133,same_section_cross_series,GSM8641043,val,hesrt,samples/GSE211895/GSM6505133,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6505134,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3232,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18035,counts,pixel,4.54475740500232,platform_constant,4.54475740500232,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,SS-GSM6505134,same_section_cross_series,GSM8641039,val,hesrt,samples/GSE211895/GSM6505134,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6505135,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2261,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic cancer,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18035,counts,pixel,4.5357587679807425,platform_constant,4.5357587679807425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,SS-GSM6505135,same_section_cross_series,GSM8641038,val,hesrt,samples/GSE211895/GSM6505135,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6505136,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1469,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,B16F10 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.428835238002819,platform_constant,4.428835238002819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505136,,,val,hesrt,samples/GSE211895/GSM6505136,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505137,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2421,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,B16F10 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.54839563732969,platform_constant,4.54839563732969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505137,,,val,hesrt,samples/GSE211895/GSM6505137,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505138,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2188,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,B16F10 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.4278615772984775,platform_constant,4.4278615772984775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505138,,,val,hesrt,samples/GSE211895/GSM6505138,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.98}",,
GSM6505139,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2897,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,B16F10 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.427435019361736,platform_constant,4.427435019361736,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505139,,,val,hesrt,samples/GSE211895/GSM6505139,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505140,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3090,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,B16F10 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.428643928596248,platform_constant,4.428643928596248,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505140,,,val,hesrt,samples/GSE211895/GSM6505140,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.8, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505141,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3444,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,B16F10 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.427576966513371,platform_constant,4.427576966513371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505141,,,val,hesrt,samples/GSE211895/GSM6505141,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505142,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1378,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.5359784842430875,platform_constant,4.5359784842430875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505142,,,val,hesrt,samples/GSE211895/GSM6505142,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM6505143,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1372,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.4278089244802725,platform_constant,4.4278089244802725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505143,,,val,hesrt,samples/GSE211895/GSM6505143,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505144,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1982,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.426813059493336,platform_constant,4.426813059493336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505144,,,val,hesrt,samples/GSE211895/GSM6505144,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505145,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1909,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.426914931840297,platform_constant,4.426914931840297,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505145,,,val,hesrt,samples/GSE211895/GSM6505145,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6505146,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3600,Assessment of Spatial Genomics for Oncology Discovery,GSE211895,GSE211895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 syngeneic tumor,MONDO:0005070,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.427554986653368,platform_constant,4.427554986653368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36452860,,GSM6505146,,,val,hesrt,samples/GSE211895/GSM6505146,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6506110,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2940,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,GSE211956,GSE211956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian tumour,MONDO:0008170,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.0517360674271305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506110,,,train,sda-all,samples/GSE211956/GSM6506110,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6506111,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1935,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,GSE211956,GSE211956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian tumour,MONDO:0008170,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.2402864810127,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506111,,,train,sda-all,samples/GSE211956/GSM6506111,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM6506112,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1504,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,GSE211956,GSE211956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian tumour,MONDO:0008170,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.367002118850552,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506112,,,train,sda-all,samples/GSE211956/GSM6506112,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM6506113,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3007,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,GSE211956,GSE211956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian tumour,MONDO:0008170,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.288795909630906,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506113,,,train,sda-all,samples/GSE211956/GSM6506113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM6506114,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2124,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,GSE211956,GSE211956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian tumour,MONDO:0008170,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.230099198708936,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506114,,,train,sda-all,samples/GSE211956/GSM6506114,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM6506115,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1801,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,GSE211956,GSE211956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian tumour,MONDO:0008170,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.119973387730536,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506115,,,train,sda-all,samples/GSE211956/GSM6506115,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM6506116,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3632,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,GSE211956,GSE211956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian tumour,MONDO:0008170,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.088968779662904,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506116,,,train,sda-all,samples/GSE211956/GSM6506116,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6506117,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3180,Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments,GSE211956,GSE211956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian tumour,MONDO:0008170,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.110960674579076,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38570491,,GSM6506117,,,train,sda-all,samples/GSE211956/GSM6506117,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6523976,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2773,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",GSE212323,GSE212323+GSE213391,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,ApoE3 Middle_age,luna,adult,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,3.8555235745592076,platform_constant,3.8555235745592076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523976,,,train,hesrt,samples/GSE212323/GSM6523976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.42}",disease_status;life_stage,low_confidence_annotation
GSM6523977,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2660,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",GSE212323,GSE212323+GSE213391,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,ApoE4 Middle_age,luna,adult,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,3.8586967613622436,platform_constant,3.8586967613622436,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523977,,,train,hesrt,samples/GSE212323/GSM6523977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.12, ""uberon"": 0.98, ""life_stage"": 0.73}",disease_status,low_confidence_annotation
GSM6523978,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,female,Visium,Visium,True,H&E,2670,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",GSE212323,GSE212323+GSE213391,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,ApoE3 Young_age,luna,juvenile,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,3.9008621243577593,platform_constant,3.9008621243577593,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523978,,,train,hesrt,samples/GSE212323/GSM6523978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 0.98, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM6523979,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,2367,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",GSE212323,GSE212323+GSE213391,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,ApoE4 Young_age,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,3.8795259882796556,platform_constant,3.8795259882796556,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523979,,,train,hesrt,samples/GSE212323/GSM6523979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 0.72}",disease_status,low_confidence_annotation
GSM6523980,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,female,Visium,Visium,True,H&E,2366,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",GSE212323,GSE212323+GSE213391,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,ApoE3 Old_aged,luna,aged,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,3.8562499891735773,platform_constant,3.8562499891735773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523980,,,train,hesrt,samples/GSE212323/GSM6523980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6523981,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,female,Visium,Visium,True,H&E,1688,"APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge [Spatial transcriptomics]",GSE212323,GSE212323+GSE213391,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,ApoE4 Old_aged,luna,aged,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,3.8467674233121714,platform_constant,3.8467674233121714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36871219,,GSM6523981,,,train,hesrt,samples/GSE212323/GSM6523981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.28, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6534007,other,disease,undifferentiated pleomorphic sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1648,Spatial transcriptomics analysis of soft tissue sarcomas.,GSE212526,GSE212526,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Undifferentiated pleomorphic sarcoma,MONDO:0002142,luna,Undifferentiated pleomorphic sarcoma,Tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7633587786259542,platform_constant,0.7633587786259542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38429415,10.1038/s43018-024-00743-y,GSM6534007,,,train,hesrt,samples/GSE212526/GSM6534007,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6534008,other,disease,leiomyosarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2103,Spatial transcriptomics analysis of soft tissue sarcomas.,GSE212526,GSE212526,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Leiomyosarcoma,MONDO:0005058,luna,Leiomyosarcoma,Tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7633587786259542,platform_constant,0.7633587786259542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38429415,10.1038/s43018-024-00743-y,GSM6534008,,,train,hesrt,samples/GSE212526/GSM6534008,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6534009,other,disease,undifferentiated pleomorphic sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2179,Spatial transcriptomics analysis of soft tissue sarcomas.,GSE212526,GSE212526,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Undifferentiated pleomorphic sarcoma,MONDO:0002142,luna,Undifferentiated pleomorphic sarcoma,Tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7633587786259542,platform_constant,0.7633587786259542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38429415,10.1038/s43018-024-00743-y,GSM6534009,,,train,hesrt,samples/GSE212526/GSM6534009,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6534010,other,disease,undifferentiated pleomorphic sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1446,Spatial transcriptomics analysis of soft tissue sarcomas.,GSE212526,GSE212526,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Undifferentiated pleomorphic sarcoma,MONDO:0002142,luna,Undifferentiated pleomorphic sarcoma,Tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7633365385053724,platform_constant,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38429415,10.1038/s43018-024-00743-y,GSM6534010,,,train,hesrt,samples/GSE212526/GSM6534010,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM6543813,breast,disease,breast neoplasm;cancer,breast,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1671,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],GSE212706,GSE212706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000310,breast,MONDO:0021100;MONDO:0004992,luna,breast tumor,early stage breast tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.368575043984842,platform_constant,4.368575043984842,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543813,,,train,hesrt,samples/GSE212706/GSM6543813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6543814,breast,disease,breast neoplasm;cancer,breast,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,617,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],GSE212706,GSE212706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000310,breast,MONDO:0021100;MONDO:0004992,luna,breast tumor,early stage breast tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.807493678731039,platform_constant,4.807493678731039,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543814,,,train,hesrt,samples/GSE212706/GSM6543814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6543815,breast,disease,breast neoplasm;cancer,breast,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1550,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],GSE212706,GSE212706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000310,breast,MONDO:0021100;MONDO:0004992,luna,breast tumor,middle stage breast tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.370864564069766,platform_constant,4.370864564069766,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543815,,,train,hesrt,samples/GSE212706/GSM6543815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6543816,breast,disease,breast neoplasm;cancer,breast,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1716,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],GSE212706,GSE212706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000310,breast,MONDO:0021100;MONDO:0004992,luna,breast tumor,late stage breast tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.809020154111703,platform_constant,4.809020154111703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543816,,,train,hesrt,samples/GSE212706/GSM6543816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6543817,breast,disease,breast neoplasm;cancer,breast,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1640,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],GSE212706,GSE212706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000310,breast,MONDO:0021100;MONDO:0004992,luna,breast tumor,late stage breast tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.806348247466123,platform_constant,4.806348247466123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543817,,,train,hesrt,samples/GSE212706/GSM6543817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6543818,breast,normal,,breast,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,480,Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics],GSE212706,GSE212706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000310,breast,,luna,,normal breast tissue,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.369338468746215,platform_constant,4.369338468746215,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1016/j.ccell.2022.09.015,GSM6543818,,,train,hesrt,samples/GSE212706/GSM6543818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6560897,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2573,Spatial transcriptomics of the mouse brain across three age groups,GSE212903,GSE212903,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,,age rule: age with unit,adult,6 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.1111111111111112,platform_constant,1.1111111111111112,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560897,,,train,hesrt,samples/GSE212903/GSM6560897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6560898,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2735,Spatial transcriptomics of the mouse brain across three age groups,GSE212903,GSE212903,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,,age rule: age with unit,aged,18 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.1166390612088835,platform_constant,1.1166390612088835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560898,,,train,hesrt,samples/GSE212903/GSM6560898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6560899,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2973,Spatial transcriptomics of the mouse brain across three age groups,GSE212903,GSE212903,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,,age rule: age with unit,aged,21 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.1111111111111112,platform_constant,1.1111111111111112,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560899,,,train,hesrt,samples/GSE212903/GSM6560899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6560900,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2804,Spatial transcriptomics of the mouse brain across three age groups,GSE212903,GSE212903,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,,age rule: age with unit,adult,6 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.1166390612088835,platform_constant,1.1166390612088835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560900,,,train,hesrt,samples/GSE212903/GSM6560900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6560901,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2801,Spatial transcriptomics of the mouse brain across three age groups,GSE212903,GSE212903,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,,age rule: age with unit,aged,18 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.1111111111111112,platform_constant,1.1111111111111112,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560901,,,train,hesrt,samples/GSE212903/GSM6560901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6560902,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2857,Spatial transcriptomics of the mouse brain across three age groups,GSE212903,GSE212903,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,,age rule: age with unit,aged,21 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.1111111111111112,platform_constant,1.1111111111111112,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37591239,,GSM6560902,,,train,hesrt,samples/GSE212903/GSM6560902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6690475,other,disease,endometriosis,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1388,A single-cell transcriptomic analysis of endometriosis,GSE213216,GSE213216,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Endometriosis,MONDO:0005133,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.015091800917568,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36624343;38370978,,GSM6690475,,,train,sda-all,samples/GSE213216/GSM6690475,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6690476,peritoneum,disease,endometriosis,peritoneum,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1960,A single-cell transcriptomic analysis of endometriosis,GSE213216,GSE213216,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Endometriosis,MONDO:0005133,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.086742145180486,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36624343;38370978,,GSM6690476,,,train,sda-all,samples/GSE213216/GSM6690476,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM6578058,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,1303,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,19923,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578058,,,train,sda-all,samples/GSE213264/GSM6578058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578059,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2037,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,19468,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578059,,,train,sda-all,samples/GSE213264/GSM6578059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6578060,small intestine,normal,,intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,902,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,intestine,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,20444,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578060,,,train,sda-all,samples/GSE213264/GSM6578060,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6578061,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2419,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,23750,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578061,,,train,sda-all,samples/GSE213264/GSM6578061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6578062,tonsil,normal,,tonsil,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2492,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002372,tonsil,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,28417,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578062,,,train,sda-all,samples/GSE213264/GSM6578062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6578063,spleen,normal,,spleen,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2494,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,spleen,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,20236,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578063,,,train,sda-all,samples/GSE213264/GSM6578063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578064,thymus,normal,,thymus,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,thymus,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,28278,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578064,,,train,sda-all,samples/GSE213264/GSM6578064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6578065,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,1691,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,15486,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578065,,,train,sda-all,samples/GSE213264/GSM6578065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6578066,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,1710,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,brain,MONDO:0018177,mondo_predicate,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,23899,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578066,,,train,sda-all,samples/GSE213264/GSM6578066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.24, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM6578067,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,1303,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,spleen,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,199,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578067,,,train,sda-all,samples/GSE213264/GSM6578067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578068,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2037,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,199,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578068,,,train,sda-all,samples/GSE213264/GSM6578068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6578069,small intestine,normal,,intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,902,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,intestine,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,199,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578069,,,train,sda-all,samples/GSE213264/GSM6578069,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM6578070,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2419,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,199,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578070,,,train,sda-all,samples/GSE213264/GSM6578070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6578071,tonsil,normal,,tonsil,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2492,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002372,tonsil,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,283,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578071,,,train,sda-all,samples/GSE213264/GSM6578071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM6578072,spleen,normal,,spleen,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2494,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002106,spleen,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,283,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578072,,,train,sda-all,samples/GSE213264/GSM6578072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578073,thymus,normal,,thymus,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002370,thymus,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,283,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578073,,,train,sda-all,samples/GSE213264/GSM6578073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6578074,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,1691,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,283,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578074,,,train,sda-all,samples/GSE213264/GSM6578074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6578075,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,1710,High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq,GSE213264,GSE213264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,brain,MONDO:0018177,luna,,No treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,230,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,36823353;39095360,,GSM6578075,,,train,sda-all,samples/GSE213264/GSM6578075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9349972,skin,disease,melanoma,skin of body,tumour tissue,Danio rerio,zebrafish,not stated,unknown,Slide-seq,Slide-seq,False,,26210,Craters on the melanoma surface serve as hubs for CD8+ T cells,GSE213286,GSE213286,7955,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,22366,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,41109214,,GSM9349972,,,train,sda-all,samples/GSE213286/GSM9349972,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 0.97}",,
GSM6578640,brain,normal,,cerebral cortex,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,False,,1264,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,GSE213306,GSE213306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000956,Brain (cortex),,luna,,"healthy, no known abnormality",age rule: post-conception / gestational weeks,fetal,Gestational week 10,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,41509247,,GSM6578640,,,train,sda-all,samples/GSE213306/GSM6578640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6578641,brain,normal,,cerebral cortex,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,False,,1113,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,GSE213306,GSE213306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000956,Brain (cortex),,luna,,"healthy, no known abnormality",age rule: post-conception / gestational weeks,fetal,Gestational week 13,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,41509247,,GSM6578641,,,train,sda-all,samples/GSE213306/GSM6578641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6578642,brain,normal,,cerebral cortex,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,False,,821,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,GSE213306,GSE213306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000956,Brain (cortex),,luna,,"healthy, no known abnormality",age rule: post-conception / gestational weeks,fetal,Gestational week 15,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,41509247,,GSM6578642,,,train,sda-all,samples/GSE213306/GSM6578642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578643,brain,normal,,cerebral cortex,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,False,,2392,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,GSE213306,GSE213306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000956,Brain (cortex),,luna,,"healthy, no known abnormality",age rule: post-conception / gestational weeks,fetal,Gestational week 17,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,41509247,,GSM6578643,,,train,sda-all,samples/GSE213306/GSM6578643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6578644,brain,normal,,cerebral cortex,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,False,,1659,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,GSE213306,GSE213306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000956,Brain (cortex),,luna,,"healthy, no known abnormality",age rule: post-conception / gestational weeks,fetal,Gestational week 20,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,41509247,,GSM6578644,,,train,sda-all,samples/GSE213306/GSM6578644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578645,brain,normal,,cerebral cortex,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,False,,1244,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,GSE213306,GSE213306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000956,Brain (cortex),,luna,,"healthy, no known abnormality",age rule: post-conception / gestational weeks,fetal,Gestational week 21,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,41509247,,GSM6578645,,,train,sda-all,samples/GSE213306/GSM6578645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578646,brain,normal,,cerebral cortex,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,False,,2424,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,GSE213306,GSE213306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000956,Brain (cortex),,luna,,"healthy, no known abnormality",age rule: post-conception / gestational weeks,fetal,Gestational week 22,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,41509247,,GSM6578646,,,train,sda-all,samples/GSE213306/GSM6578646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6578647,brain,normal,,cerebral cortex,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,False,,3255,Spatial transcriptomic analysis of human oligodendrocyte development across gestational weeks 10 to 24,GSE213306,GSE213306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000956,Brain (cortex),,luna,,"healthy, no known abnormality",age rule: post-conception / gestational weeks,fetal,Gestational week 24,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,41509247,,GSM6578647,,,train,sda-all,samples/GSE213306/GSM6578647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6585445,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1325,Periportal macrophages protect against commensal-driven liver inflammation [spatial transcriptomics],GSE213388,GSE213388,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Wild type,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.792450953722311,platform_constant,4.792450953722311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38658756,,GSM6585445,,,val,hesrt,samples/GSE213388/GSM6585445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6585446,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1126,Periportal macrophages protect against commensal-driven liver inflammation [spatial transcriptomics],GSE213388,GSE213388,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Wild type,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.794807186357743,platform_constant,4.794807186357743,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38658756,,GSM6585446,,,val,hesrt,samples/GSE213388/GSM6585446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6585447,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2484,Periportal macrophages protect against commensal-driven liver inflammation [spatial transcriptomics],GSE213388,GSE213388,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Wild type,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.358304559939988,platform_constant,4.358304559939988,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38658756,,GSM6585447,,,val,hesrt,samples/GSE213388/GSM6585447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6585448,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1719,Periportal macrophages protect against commensal-driven liver inflammation [spatial transcriptomics],GSE213388,GSE213388,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Wild type,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.35880313821056,platform_constant,4.35880313821056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38658756,,GSM6585448,,,val,hesrt,samples/GSE213388/GSM6585448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6591749,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,332,Multi-omics profiling visualizes dynamics of cardiac development and functions,GSE213666,GSE213666,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,wild type,age rule: embryonic day,embryonic,10.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.5780250255571965,platform_constant,0.5780250255571965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36577384,,GSM6591749,,,train,hesrt,samples/GSE213666/GSM6591749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592048,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1689,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,,luna,,CL-like,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9727065412012545,platform_constant,3.9727065412012545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592048,,,train,hesrt,samples/GSE213688/GSM6592048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592049,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1848,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,CL-like,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9727065412012545,platform_constant,3.9727065412012545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592049,,,train,hesrt,samples/GSE213688/GSM6592049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592050,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2417,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,Unstable,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9170248727954173,platform_constant,3.9170248727954173,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592050,,,train,hesrt,samples/GSE213688/GSM6592050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6592051,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1564,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,Unstable,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.141044033787043,platform_constant,5.141044033787043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592051,,,train,hesrt,samples/GSE213688/GSM6592051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592052,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2104,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,Unstable,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.044621436162119,platform_constant,4.044621436162119,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592052,,,train,hesrt,samples/GSE213688/GSM6592052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592053,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1731,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,Unstable,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9632907852841317,platform_constant,3.9632907852841317,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592053,,,train,hesrt,samples/GSE213688/GSM6592053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6592054,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1596,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,,luna,,CL-like,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.044621436162119,platform_constant,4.044621436162119,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592054,,,train,hesrt,samples/GSE213688/GSM6592054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592055,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1055,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,CL-like,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.009719121746315,platform_constant,4.009719121746315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592055,,,train,hesrt,samples/GSE213688/GSM6592055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592056,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1258,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,,luna,,CL-like,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9537129980145957,platform_constant,3.9537129980145957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592056,,,train,hesrt,samples/GSE213688/GSM6592056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592057,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,370,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,,luna,,CL-like,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.929037930962169,platform_constant,3.929037930962169,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592057,,,train,hesrt,samples/GSE213688/GSM6592057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592058,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1405,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,CL-like,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.920758655657871,platform_constant,3.920758655657871,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592058,,,train,hesrt,samples/GSE213688/GSM6592058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592059,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2657,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,Metaplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.285526457211834,platform_constant,4.285526457211834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592059,,,train,hesrt,samples/GSE213688/GSM6592059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6592060,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1295,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,Metaplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.246052527762938,platform_constant,4.246052527762938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592060,,,train,hesrt,samples/GSE213688/GSM6592060,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM6592061,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3037,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,Metaplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.344736978964481,platform_constant,4.344736978964481,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592061,,,train,hesrt,samples/GSE213688/GSM6592061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6592062,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2700,Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes,GSE213688,GSE213688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0007254,luna,,Metaplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.344736978964481,platform_constant,4.344736978964481,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37813278,10.5281/zenodo.20727406,GSM6592062,,,train,hesrt,samples/GSE213688/GSM6592062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6592131,ovary,disease,fallopian tube carcinoma;ovarian cancer,ovary,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3356,Spatial transcriptomics of ovarian cancer tumors,GSE213699,GSE213699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000992,Ovary,MONDO:0006206;MONDO:0008170,luna,grade 3 serous fallopian tube carcinoma,Ovarian_cancer,age rule: bare number read as years,aged,66,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,16129,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592131,,,train,hesrt,samples/GSE213699/GSM6592131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM6592132,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2272,Spatial transcriptomics of ovarian cancer tumors,GSE213699,GSE213699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000992,Ovary,MONDO:0005140,luna,high grade serous ovarian carcinoma,Ovarian_cancer,age rule: bare number read as years,aged,71,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,15848,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592132,,,train,hesrt,samples/GSE213699/GSM6592132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6592133,peritoneum,disease,ovarian carcinoma,omentum,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2254,Spatial transcriptomics of ovarian cancer tumors,GSE213699,GSE213699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0003688,Ovary,MONDO:0005140,luna,high grade serous ovarian carcinoma,Omentum,age rule: bare number read as years,aged,71,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,14799,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592133,,,train,hesrt,samples/GSE213699/GSM6592133,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6592134,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3139,Spatial transcriptomics of ovarian cancer tumors,GSE213699,GSE213699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000992,Ovary,MONDO:0005140,luna,high grade serous ovarian carcinoma,Ovarian_cancer,age rule: bare number read as years,adult,43,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,15509,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592134,,,train,hesrt,samples/GSE213699/GSM6592134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6592135,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2142,Spatial transcriptomics of ovarian cancer tumors,GSE213699,GSE213699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000992,Ovary,MONDO:0008170,luna,Undifferentiated SMARCA4/SMARCA2-deficient malignant neoplasm,Ovarian_cancer,age rule: bare number read as years,adult,35,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,15005,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592135,,,train,hesrt,samples/GSE213699/GSM6592135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592136,peritoneum,disease,ovarian carcinoma,omentum,metastasis,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3107,Spatial transcriptomics of ovarian cancer tumors,GSE213699,GSE213699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0003688,Ovary,MONDO:0005140,luna,high grade serous ovarian carcinoma,Omentum,age rule: bare number read as years,adult,35,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,14346,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592136,,,train,hesrt,samples/GSE213699/GSM6592136,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6592137,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2495,Spatial transcriptomics of ovarian cancer tumors,GSE213699,GSE213699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000992,Ovary,MONDO:0008170,luna,Undifferentiated SMARCA4/SMARCA2-deficient malignant neoplasm,Ovarian_cancer,age rule: bare number read as years,adult,35,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,15359,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592137,,,train,hesrt,samples/GSE213699/GSM6592137,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6592138,ovary,disease,ovarian cancer;carcinoma;high grade malignant neoplasm,ovary,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4156,Spatial transcriptomics of ovarian cancer tumors,GSE213699,GSE213699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000992,Ovary,MONDO:0008170;MONDO:0004993;MONDO:0020665,luna,"High grade serous carcinoma (11 cm) involving ovarian surface and parenchyma, and fallopian tube serosa, arising in a background of serous tubal intraepithelial carcinoma",Ovarian_cancer,age rule: bare number read as years,adult,48,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,15454,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36249907,10.1016/j.gore.2022.101077,GSM6592138,,,train,hesrt,samples/GSE213699/GSM6592138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6600043,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),,luna,,CTRL,luna,not stated,,not stated,,GSE214138:CTRL_1,CTRL_1,,,release v3,sequencing-based,DBiT-seq,,,spot,23669,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600043,,,train,sda-all,samples/GSE214138/GSM6600043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6600044,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),,luna,,CTRL,luna,not stated,,not stated,,GSE214138:CTRL_2,CTRL_2,,,release v3,sequencing-based,DBiT-seq,,,spot,22858,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600044,,,train,sda-all,samples/GSE214138/GSM6600044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM6600045,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),,luna,,CTRL,luna,not stated,,not stated,,GSE214138:CTRL_3,CTRL_3,,,release v3,sequencing-based,DBiT-seq,,,spot,19318,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600045,,,train,sda-all,samples/GSE214138/GSM6600045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM6600046,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),,luna,,CTRL,luna,not stated,,not stated,,GSE214138:CTRL_4,CTRL_4,,,release v3,sequencing-based,DBiT-seq,,,spot,22369,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600046,,,train,sda-all,samples/GSE214138/GSM6600046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6600047,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),,luna,,CTRL,luna,not stated,,not stated,,GSE214138:CTRL_4,CTRL_4,,,release v3,sequencing-based,DBiT-seq,,,spot,23234,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600047,,,train,sda-all,samples/GSE214138/GSM6600047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6600048,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),,luna,,CTRL,luna,not stated,,not stated,,GSE214138:CTRL_5,CTRL_5,,,release v3,sequencing-based,DBiT-seq,,,spot,24113,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600048,,,train,sda-all,samples/GSE214138/GSM6600048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6600049,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),,luna,,CTRL,luna,not stated,,not stated,,GSE214138:CTRL_6,CTRL_6,,,release v3,sequencing-based,DBiT-seq,,,spot,20161,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600049,,,train,sda-all,samples/GSE214138/GSM6600049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6600050,brain,disease,major depressive disorder,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),MONDO:0002009,luna,,MDD,luna,not stated,,not stated,,GSE214138:MDD_1,MDD_1,,,release v3,sequencing-based,DBiT-seq,,,spot,20376,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600050,,,train,sda-all,samples/GSE214138/GSM6600050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM6600051,brain,disease,major depressive disorder,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),MONDO:0002009,luna,,MDD,luna,not stated,,not stated,,GSE214138:MDD_3,MDD_3,,,release v3,sequencing-based,DBiT-seq,,,spot,23620,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600051,,,train,sda-all,samples/GSE214138/GSM6600051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6600052,brain,disease,major depressive disorder,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),MONDO:0002009,luna,,MDD,luna,not stated,,not stated,,GSE214138:MDD_3,MDD_3,,,release v3,sequencing-based,DBiT-seq,,,spot,22925,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600052,,,train,sda-all,samples/GSE214138/GSM6600052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6600053,brain,disease,major depressive disorder,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),MONDO:0002009,luna,,MDD,luna,not stated,,not stated,,GSE214138:MDD_4,MDD_4,,,release v3,sequencing-based,DBiT-seq,,,spot,25744,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600053,,,train,sda-all,samples/GSE214138/GSM6600053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM6600054,brain,disease,major depressive disorder,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),MONDO:0002009,luna,,MDD,luna,not stated,,not stated,,GSE214138:MDD_4,MDD_4,,,release v3,sequencing-based,DBiT-seq,,,spot,24777,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600054,,,train,sda-all,samples/GSE214138/GSM6600054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM6600055,brain,disease,major depressive disorder,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially resolved multi-omic profiling of human hippocampus reveals region-specific alterations in major depressive disorder [RNA-seq],GSE214138,GSE214138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus (Brain),MONDO:0002009,luna,,MDD,luna,not stated,,not stated,,GSE214138:MDD_5,MDD_5,,,release v3,sequencing-based,DBiT-seq,,,spot,21783,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM6600055,,,train,sda-all,samples/GSE214138/GSM6600055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM6604482,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3141,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 1st day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.9864752448956544,platform_constant,3.9864752448956544,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604482,,,train,hesrt,samples/GSE214349/GSM6604482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604483,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3123,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 1st day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.910929179274516,platform_constant,3.910929179274516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604483,,,train,hesrt,samples/GSE214349/GSM6604483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604484,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3188,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 1st day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.9933059216106925,platform_constant,3.9933059216106925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604484,,,train,hesrt,samples/GSE214349/GSM6604484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6604485,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3049,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 1st day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.95901653636313,platform_constant,3.95901653636313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604485,,,train,hesrt,samples/GSE214349/GSM6604485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6604486,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3166,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 1st day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.9959015444416024,platform_constant,3.9959015444416024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604486,,,train,hesrt,samples/GSE214349/GSM6604486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604487,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3168,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 1st day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.9752734682845325,platform_constant,3.9752734682845325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604487,,,train,hesrt,samples/GSE214349/GSM6604487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604488,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3230,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 3rd day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.027534312433566,platform_constant,4.027534312433566,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604488,,,train,hesrt,samples/GSE214349/GSM6604488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604489,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3107,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 3rd day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.999862804705772,platform_constant,3.999862804705772,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604489,,,train,hesrt,samples/GSE214349/GSM6604489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6604490,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3250,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 3rd day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.108196705700332,platform_constant,4.108196705700332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604490,,,train,hesrt,samples/GSE214349/GSM6604490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6604491,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2990,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 3rd day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.044657524822522,platform_constant,4.044657524822522,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604491,,,train,hesrt,samples/GSE214349/GSM6604491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604492,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3066,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 3rd day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.1083334709049995,platform_constant,4.1083334709049995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604492,,,train,hesrt,samples/GSE214349/GSM6604492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM6604493,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3145,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 7th day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.024726671393898,platform_constant,4.024726671393898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604493,,,train,hesrt,samples/GSE214349/GSM6604493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6604494,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3099,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 7th day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.004235142405109,platform_constant,4.004235142405109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604494,,,train,hesrt,samples/GSE214349/GSM6604494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6604495,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3003,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0043510,luna,,The needle-puncture group with blood injection at 7th day,age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.983743088618563,platform_constant,3.983743088618563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604495,,,train,hesrt,samples/GSE214349/GSM6604495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6604496,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3232,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,The no-surgery group (control),age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.0950532754119555,platform_constant,4.0950532754119555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604496,,,train,hesrt,samples/GSE214349/GSM6604496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6604497,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3156,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,The no-surgery group (control),age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.062568211028085,platform_constant,4.062568211028085,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604497,,,train,hesrt,samples/GSE214349/GSM6604497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6604498,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3027,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,The needle-puncture group without blood injection (sham),age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.105191283514357,platform_constant,4.105191283514357,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604498,,,train,hesrt,samples/GSE214349/GSM6604498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6604499,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3070,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,The needle-puncture group without blood injection (sham),age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.9772334365042967,platform_constant,3.9772334365042967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604499,,,train,hesrt,samples/GSE214349/GSM6604499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6604500,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2791,Discovering Haematoma-Stimulated Circuits for Secondary Brain Injury after Intraventricular Haemorrhage by Spatial Transcriptome Analysis,GSE214349,GSE214349,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,The needle-puncture group without blood injection (sham),age rule: age with unit,not stated,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.004235142405109,platform_constant,4.004235142405109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36825001,,GSM6604500,,,train,hesrt,samples/GSE214349/GSM6604500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6604700,other,disease,gastric cancer,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2380,Spatial transcriptomics data of GAN-KP tumor treated with regorafenib,GSE214363,GSE214363,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Subcutaneous tumor,MONDO:0001056,luna,gastric cancer,Vehicle control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.806334846853141,platform_constant,4.806334846853141,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36543251,,GSM6604700,,,train,hesrt,samples/GSE214363/GSM6604700,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM6604701,other,disease,gastric cancer,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1594,Spatial transcriptomics data of GAN-KP tumor treated with regorafenib,GSE214363,GSE214363,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Subcutaneous tumor,MONDO:0001056,luna,gastric cancer,Regorafenib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.808606719852257,platform_constant,4.808606719852257,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36543251,,GSM6604701,,,train,hesrt,samples/GSE214363/GSM6604701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM6612124,breast,disease,estrogen-receptor positive breast cancer,breast,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2330,Spatial transcriptomics reveals functional compartmentalization of estrogen receptor positive (ER+) breast cancer,GSE214571,GSE214571,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0000310,GS3 breast cancer PDX,MONDO:0006512,luna,ER+ breast cancer,Placebo,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.098008861831066,platform_constant,4.098008861831066,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38282415,,GSM6612124,,,train,hesrt,samples/GSE214571/GSM6612124,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6612125,breast,disease,estrogen-receptor positive breast cancer,breast,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2863,Spatial transcriptomics reveals functional compartmentalization of estrogen receptor positive (ER+) breast cancer,GSE214571,GSE214571,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0000310,GS3 breast cancer PDX,MONDO:0006512,luna,ER+ breast cancer,E2,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.099778838127547,platform_constant,4.099778838127547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38282415,,GSM6612125,,,train,hesrt,samples/GSE214571/GSM6612125,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6612126,breast,disease,estrogen-receptor positive breast cancer,breast,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1967,Spatial transcriptomics reveals functional compartmentalization of estrogen receptor positive (ER+) breast cancer,GSE214571,GSE214571,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0000310,SC31 breast cancer PDX,MONDO:0006512,luna,ER+ breast cancer,Placebo,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.099557578697796,platform_constant,4.099557578697796,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38282415,,GSM6612126,,,train,hesrt,samples/GSE214571/GSM6612126,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM6612127,breast,disease,estrogen-receptor positive breast cancer,breast,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2163,Spatial transcriptomics reveals functional compartmentalization of estrogen receptor positive (ER+) breast cancer,GSE214571,GSE214571,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0000310,SC31 breast cancer PDX,MONDO:0006512,luna,ER+ breast cancer,E2,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.250643352335137,platform_constant,4.250643352335137,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38282415,,GSM6612127,,,train,hesrt,samples/GSE214571/GSM6612127,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM6613077,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1917,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,mondo_predicate (Luna: perturbation),,Day3 Isoproterenol,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750908528948415,platform_constant,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,GSM6613077,,,train,hesrt,samples/GSE214611/GSM6613077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613078,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3057,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,1HR and 4HR Day3 Needle Pass,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9412420405561437,platform_constant,3.9412420405561437,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,GSM6613078,,,train,hesrt,samples/GSE214611/GSM6613078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6613079,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3123,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,mondo_predicate (Luna: perturbation),myocardial injury,Day3 TAC Needle pass,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.47215106287996,platform_constant,4.47215106287996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,GSM6613079,,,train,hesrt,samples/GSE214611/GSM6613079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6613080,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3540,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,mondo_predicate (Luna: perturbation),,Day3 Sham Needle pass,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.244113146314886,platform_constant,4.244113146314886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-bcd077e3eb1d,cross_gse_redeposit,GSM8305627,train,hesrt,samples/GSE214611/GSM6613080,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6613081,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2696,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,mondo_predicate (Luna: perturbation),,Day3 Sham Needle pass,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.275090852894863,platform_constant,4.275090852894863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-3ac3354a16fd,cross_gse_redeposit,GSM8305628,train,hesrt,samples/GSE214611/GSM6613081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6613082,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2468,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,1HR MI,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.47215106287996,platform_constant,4.47215106287996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,GSM6613082,,,train,hesrt,samples/GSE214611/GSM6613082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613083,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2578,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,4HR MI,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.177474669461614,platform_constant,4.177474669461614,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,GSM6613083,,,train,hesrt,samples/GSE214611/GSM6613083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613084,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2251,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,Day1 MI,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.177891967638555,platform_constant,4.177891967638555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-7af6bfd9c30e,cross_gse_redeposit,GSM8305630,train,hesrt,samples/GSE214611/GSM6613084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM6613085,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2461,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,Day1 MI,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750908528948415,platform_constant,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-7d54d1f5de36,cross_gse_redeposit,GSM8305631,train,hesrt,samples/GSE214611/GSM6613085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6613086,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2438,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,Day1 MI,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750908528948415,platform_constant,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-5bd5e1a133fe,cross_gse_redeposit,GSM8305632,train,hesrt,samples/GSE214611/GSM6613086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613087,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2325,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,Day7 MI,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.1869091074055005,platform_constant,4.1869091074055005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-f917081e6214,cross_gse_redeposit,GSM8305636,train,hesrt,samples/GSE214611/GSM6613087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613088,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2428,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,Day7 MI,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750908528948415,platform_constant,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-5599f7e6a8ac,cross_gse_redeposit,GSM8305637,train,hesrt,samples/GSE214611/GSM6613088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613089,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2363,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,Day7 MI,age rule: age with unit,not stated,8–12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750908528948415,platform_constant,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-642cb8156460,cross_gse_redeposit,GSM8305638,train,hesrt,samples/GSE214611/GSM6613089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6613090,heart,disease,,heart,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1551,Single Cell Spatial Transcriptomics Redefines the Borderzone induced by Myocardial Infarction and Mechanical Injury,GSE214611,GSE214611,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,cardiac,,luna,ST-elevation myocardial infarction,STEMI,age rule: age in years,adult,45 years,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.561515746777104,platform_constant,4.561515746777104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39086770,,CG-0c78b365b4df,cross_gse_redeposit,GSM8305663,train,hesrt,samples/GSE214611/GSM6613090,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6619680,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,2397,Spatial transcriptomics profiling of the developing mouse embryo,GSE214989,GSE214989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,12.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22496,counts,pixel,0.17211678464535718,platform_constant,0.5000007819945902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36604544,,GSM6619680,,,train,hesrt,samples/GSE214989/GSM6619680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6631766,skeletal muscle,disease,Duchenne muscular dystrophy,gastrocnemius,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1586,Muscle injury induces a transient senescence-like state that is required for myofiber growth during muscle regeneration [Spatial Transcriptomics],GSE215305,GSE215305,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius muscle,MONDO:0010679,luna,muscular dystrophy,D2-mdx,age rule: age with unit,adult,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.170060714701638,platform_constant,4.170060714701638,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36190443,,GSM6631766,,,train,hesrt,samples/GSE215305/GSM6631766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM6634335,lung,disease,cancer,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3189,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],GSE215361,GSE215361,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004992,luna,lung adenocarcinoma,PBS control,age rule: age with unit,adult,21–25 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,30970,counts,pixel,5.009027073246927,platform_constant,5.009027073246927,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634335,,,train,hesrt,samples/GSE215361/GSM6634335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6634336,lung,disease,cancer,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2947,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],GSE215361,GSE215361,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004992,luna,lung adenocarcinoma,PBS control,age rule: age with unit,adult,21–25 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,30970,counts,pixel,4.508124135106259,platform_constant,4.508124135106259,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634336,,,train,hesrt,samples/GSE215361/GSM6634336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6634337,lung,disease,cancer,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3503,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],GSE215361,GSE215361,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004992,luna,lung adenocarcinoma,PBS control,age rule: age with unit,adult,21–25 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,30970,counts,pixel,4.508124135106268,platform_constant,4.508124135106268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634337,,,train,hesrt,samples/GSE215361/GSM6634337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM6634338,lung,disease,cancer,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2937,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],GSE215361,GSE215361,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004992,luna,lung adenocarcinoma,PBS control,age rule: age with unit,adult,21–25 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,30970,counts,pixel,4.508124135106259,platform_constant,4.508124135106259,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634338,,,train,hesrt,samples/GSE215361/GSM6634338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6634339,lung,disease,cancer,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3693,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],GSE215361,GSE215361,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004992,mondo_predicate (Luna: perturbation),lung adenocarcinoma,Diphtheria Toxin treated,age rule: age with unit,adult,21–25 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,30970,counts,pixel,4.508124135106268,platform_constant,4.508124135106268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634339,,,train,hesrt,samples/GSE215361/GSM6634339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6634340,lung,disease,cancer,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3788,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],GSE215361,GSE215361,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004992,mondo_predicate (Luna: perturbation),lung adenocarcinoma,Diphtheria Toxin treated,age rule: age with unit,adult,21–25 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,30970,counts,pixel,4.508124135106268,platform_constant,4.508124135106268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634340,,,train,hesrt,samples/GSE215361/GSM6634340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6634341,lung,disease,cancer,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3505,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],GSE215361,GSE215361,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004992,mondo_predicate (Luna: perturbation),lung adenocarcinoma,Diphtheria Toxin treated,age rule: age with unit,adult,21–25 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,30970,counts,pixel,4.508124135106268,platform_constant,4.508124135106268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634341,,,train,hesrt,samples/GSE215361/GSM6634341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6634342,lung,disease,cancer,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3072,Conserved transcriptional connectivity of regulatory T cells in the tumor microenvironment informs novel combination cancer therapy strategies [visium],GSE215361,GSE215361,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004992,mondo_predicate (Luna: perturbation),lung adenocarcinoma,Diphtheria Toxin treated,age rule: age with unit,adult,21–25 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,30970,counts,pixel,5.009027073246927,platform_constant,5.009027073246927,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37127830,,GSM6634342,,,train,hesrt,samples/GSE215361/GSM6634342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6645167,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),249,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,7,not stated,,GSE215897:XDD399,XDD399,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.182351164129467,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645167,,,train,sda-all,samples/GSE215897/GSM6645167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM6645168,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),388,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,7,not stated,,GSE215897:XDD399,XDD399,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.182729541510399,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645168,,,train,sda-all,samples/GSE215897/GSM6645168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.22}",life_stage,low_confidence_annotation
GSM6645169,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),319,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,7,not stated,,GSE215897:XDD399,XDD399,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.1420525064838625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645169,,,train,sda-all,samples/GSE215897/GSM6645169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.29}",life_stage,low_confidence_annotation
GSM6645170,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),234,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,7,not stated,,GSE215897:XDD399,XDD399,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.140920274038452,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645170,,,train,sda-all,samples/GSE215897/GSM6645170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM6645171,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),286,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,7,not stated,,GSE215897:XDD399,XDD399,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.1839991835455335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645171,,,train,sda-all,samples/GSE215897/GSM6645171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM6645172,lung,normal,,lung,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),386,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,juvenile,7,not stated,,GSE215897:XDD399,XDD399,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.1408822512446095,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645172,,,train,sda-all,samples/GSE215897/GSM6645172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.19}",life_stage,low_confidence_annotation
GSM6645173,lung,normal,,lung,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),416,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,juvenile,7,not stated,,GSE215897:XDD398,XDD398,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.180982537033461,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645173,,,train,sda-all,samples/GSE215897/GSM6645173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.19}",life_stage,low_confidence_annotation
GSM6645174,lung,normal,,lung,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),509,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,embryonic,7,not stated,,GSE215897:XDD398,XDD398,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.181832751105129,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645174,,,train,sda-all,samples/GSE215897/GSM6645174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM6645175,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),4529,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,11,not stated,,GSE215897:XDD388,XDD388,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.11728564399837,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645175,,,train,sda-all,samples/GSE215897/GSM6645175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM6645176,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),4400,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,11,not stated,,GSE215897:XDD388,XDD388,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.146754216678052,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645176,,,train,sda-all,samples/GSE215897/GSM6645176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM6645177,lung,normal,,lung,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),4076,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,juvenile,11,not stated,,GSE215897:XDD388,XDD388,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.183549233465804,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645177,,,train,sda-all,samples/GSE215897/GSM6645177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.78}",,
GSM6645178,lung,normal,,lung,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),4234,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,juvenile,11,not stated,,GSE215897:XDD388,XDD388,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.156314367980642,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645178,,,train,sda-all,samples/GSE215897/GSM6645178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM6645179,lung,normal,,lung,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),2835,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,embryonic,10,not stated,,GSE215897:XDD371,XDD371,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.184218558875444,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645179,,,train,sda-all,samples/GSE215897/GSM6645179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM6645180,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),3056,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,10,not stated,,GSE215897:XDD371,XDD371,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.225546720058437,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645180,,,train,sda-all,samples/GSE215897/GSM6645180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM6645181,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),2721,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,10,not stated,,GSE215897:XDD371,XDD371,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.211737888678536,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645181,,,train,sda-all,samples/GSE215897/GSM6645181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM6645182,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),3212,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,10,not stated,,GSE215897:XDD371,XDD371,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.216705258781979,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645182,,,train,sda-all,samples/GSE215897/GSM6645182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.36}",life_stage,low_confidence_annotation
GSM6645183,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),1487,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,9,not stated,,GSE215897:XDD373,XDD373,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.183015316574518,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645183,,,train,sda-all,samples/GSE215897/GSM6645183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM6645184,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),1806,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,9,not stated,,GSE215897:XDD373,XDD373,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.220601387714275,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645184,,,train,sda-all,samples/GSE215897/GSM6645184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM6645185,lung,normal,,lung,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,blue bright-field stain (heuristic),894,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,embryonic,8,not stated,,GSE215897:XDD374,XDD374,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.183309378053482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645185,,,train,sda-all,samples/GSE215897/GSM6645185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM6645186,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,blue bright-field stain (heuristic),948,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,8,not stated,,GSE215897:XDD374,XDD374,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.1816754017873805,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645186,,,train,sda-all,samples/GSE215897/GSM6645186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM6645187,lung,normal,,lung,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),3683,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,juvenile,12,not stated,,GSE215897:XDD369,XDD369,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.16726470386027,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645187,,,train,sda-all,samples/GSE215897/GSM6645187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM6645188,lung,normal,,lung,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),3257,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,juvenile,12,not stated,,GSE215897:XDD369,XDD369,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.181132551645713,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645188,,,train,sda-all,samples/GSE215897/GSM6645188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM6645189,lung,normal,,lung,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2913,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,juvenile,12,not stated,,GSE215897:XDD369,XDD369,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.207117721659789,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645189,,,train,sda-all,samples/GSE215897/GSM6645189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM6645190,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3734,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,12,not stated,,GSE215897:XDD369,XDD369,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.176850918933718,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645190,,,train,sda-all,samples/GSE215897/GSM6645190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM6645191,lung,normal,,lung,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),355,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,juvenile,6,not stated,,GSE215897:XDD5743_326,XDD5743_326,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.3545927397239605,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645191,,,train,sda-all,samples/GSE215897/GSM6645191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.17}",life_stage,low_confidence_annotation
GSM6645192,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),371,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,6,not stated,,GSE215897:XDD5743_326,XDD5743_326,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.356099437937214,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645192,,,train,sda-all,samples/GSE215897/GSM6645192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.18}",life_stage,low_confidence_annotation
GSM6645193,lung,normal,,lung,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),347,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,embryonic,6,not stated,,GSE215897:XDD5743_326,XDD5743_326,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.3547559858658325,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645193,,,train,sda-all,samples/GSE215897/GSM6645193,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM6645194,lung,normal,,lung,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),369,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,embryonic,6,not stated,,GSE215897:XDD5743_326,XDD5743_326,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.355006264635587,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645194,,,train,sda-all,samples/GSE215897/GSM6645194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM6645195,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),954,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,8.5,not stated,,GSE215897:XDD0600_318,XDD0600_318,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.354521889092953,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645195,,,train,sda-all,samples/GSE215897/GSM6645195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.8}",,
GSM6645196,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),940,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,8.5,not stated,,GSE215897:XDD0600_318,XDD0600_318,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.35318848373424,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645196,,,train,sda-all,samples/GSE215897/GSM6645196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM6645197,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),3468,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,13.5,not stated,,GSE215897:XDD359,XDD359,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.1848317544736915,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645197,,,train,sda-all,samples/GSE215897/GSM6645197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM6645198,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),4881,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,13.5,not stated,,GSE215897:XDD359,XDD359,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.098401479988523,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645198,,,train,sda-all,samples/GSE215897/GSM6645198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM6645199,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),2113,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,13.5,not stated,,GSE215897:XDD359,XDD359,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.184960175623504,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645199,,,train,sda-all,samples/GSE215897/GSM6645199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM6645200,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),4508,A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung [ST],GSE215897,GSE215897,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,13.5,not stated,,GSE215897:XDD359,XDD359,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.221256005382574,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,36646791,,GSM6645200,,,train,sda-all,samples/GSE215897/GSM6645200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM6652504,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2005,Spatial transcriptomics on human dorsal root ganglion (DRG),GSE215994,GSE215994,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,Lumbar DRG,,luna,,,age rule: age in years,aged,96 years,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37481,counts,pixel,0.6763553368079128,platform_constant,0.6763553368079128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37664243,,GSM6652504,,,train,hesrt,samples/GSE215994/GSM6652504,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6652505,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1775,Spatial transcriptomics on human dorsal root ganglion (DRG),GSE215994,GSE215994,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,Lumbar DRG,,luna,,,age rule: age in years,aged,96 years,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37481,counts,pixel,0.6802563689088104,platform_constant,0.6802563689088104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37664243,,GSM6652505,,,train,hesrt,samples/GSE215994/GSM6652505,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6661400,liver,disease,malignant colon neoplasm,liver,metastasis,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3751,Fragment-sequencing unveils local tissue microenvironments at single cell resolution,GSE216189,GSE216189,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0021063,luna,metastatic liver,intrasplenic injection with mouse colon cancer organoids,age rule: age with unit,adult,8–10 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.9385070096183785,platform_constant,4.9385070096183785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38012149,10.1101/2022.10.31.514509,GSM6661400,,,train,hesrt,samples/GSE216189/GSM6661400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6661401,liver,disease,malignant colon neoplasm,liver,metastasis,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3606,Fragment-sequencing unveils local tissue microenvironments at single cell resolution,GSE216189,GSE216189,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0021063,luna,metastatic liver,intrasplenic injection with mouse colon cancer organoids,age rule: age with unit,adult,8–10 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.450224830082512,platform_constant,4.450224830082512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38012149,10.1101/2022.10.31.514509,GSM6661401,,,train,hesrt,samples/GSE216189/GSM6661401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6661593,other,normal,,,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,650,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,GSE216214,GSE216214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,murine hindpaw,,luna,,Day 0,age rule: age with unit,adult,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.55487518674277,platform_constant,4.55487518674277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661593,,,train,hesrt,samples/GSE216214/GSM6661593,sda-tissue-disease-2.5,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": NaN, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM6661594,other,normal,,,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1025,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,GSE216214,GSE216214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,murine hindpaw,,luna,,Day 0,age rule: age with unit,adult,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661594,,,train,hesrt,samples/GSE216214/GSM6661594,sda-tissue-disease-2.5,"{""organ"": 0.63, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": NaN, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6661595,other,perturbation,,,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,824,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,GSE216214,GSE216214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,murine hindpaw,,luna,,Day 14,age rule: age with unit,adult,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.55487518674277,platform_constant,4.55487518674277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661595,,,train,hesrt,samples/GSE216214/GSM6661595,sda-tissue-disease-2.5,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM6661596,other,perturbation,,,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1017,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,GSE216214,GSE216214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,murine hindpaw,,luna,,Day 14,age rule: age with unit,adult,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.55487518674277,platform_constant,4.55487518674277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661596,,,train,hesrt,samples/GSE216214/GSM6661596,sda-tissue-disease-2.5,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6661597,other,perturbation,,,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1495,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,GSE216214,GSE216214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,murine hindpaw,,luna,,Day 21,age rule: age with unit,adult,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661597,,,train,hesrt,samples/GSE216214/GSM6661597,sda-tissue-disease-2.5,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM6661598,other,perturbation,,,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1706,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,GSE216214,GSE216214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,murine hindpaw,,luna,,Day 21,age rule: age with unit,adult,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661598,,,train,hesrt,samples/GSE216214/GSM6661598,sda-tissue-disease-2.5,"{""organ"": 0.42, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6661599,other,perturbation,,,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,875,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,GSE216214,GSE216214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,murine hindpaw,,luna,,Day 28,age rule: age with unit,adult,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.55487518674277,platform_constant,4.55487518674277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661599,,,train,hesrt,samples/GSE216214/GSM6661599,sda-tissue-disease-2.5,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6661600,other,perturbation,,,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,873,Defining the spatial-molecular map of fibrotic tendon healing and the drivers of Scleraxis-lineage cell fate and function,GSE216214,GSE216214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,murine hindpaw,,luna,,Day 28,age rule: age with unit,adult,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36417854,,GSM6661600,,,train,hesrt,samples/GSE216214/GSM6661600,sda-tissue-disease-2.5,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7837730,breast,normal,,mammary gland,primary tissue,Mus musculus,house mouse,aged,female,Visium,Visium,True,H&E,6597,"scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice",GSE216542,GSE216542,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,Mammary Glands,,luna,,,age rule: age with unit,aged,18 months,extracted field,female,GSE216542:rep1,rep1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,0.22234523237778303,platform_constant,0.5000021778686704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39587369,,GSM7837730,,,train,hesrt,samples/GSE216542/GSM7837730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7837731,breast,normal,,mammary gland,primary tissue,Mus musculus,house mouse,aged,female,Visium,Visium,True,H&E,9745,"scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice",GSE216542,GSE216542,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,Mammary Glands,,luna,,,age rule: age with unit,aged,18 months,extracted field,female,GSE216542:rep2,rep2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,0.22209886821758984,platform_constant,0.50000522760335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39587369,,GSM7837731,,,train,hesrt,samples/GSE216542/GSM7837731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8155366,breast,normal,,mammary gland,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4403,"scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice",GSE216542,GSE216542,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,Mammary Gland,,luna,,,age rule: age with unit,adult,3 months,extracted field,female,GSE216542:rep1,rep1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,0.221956581327033,platform_constant,0.4999995238691328,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39587369,,GSM8155366,,,train,hesrt,samples/GSE216542/GSM8155366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8155367,breast,normal,,mammary gland,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4070,"scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice",GSE216542,GSE216542,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,Mammary Gland,,luna,,,age rule: age with unit,adult,3 months,extracted field,female,GSE216542:rep2,rep2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,0.22209886821758984,platform_constant,0.5000025360675613,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39587369,,GSM8155367,,,train,hesrt,samples/GSE216542/GSM8155367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6703212,blood vessel,disease,,blood vessel,engineered tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,560,Spatial transcriptomic profiling of Patient and Patient-corrected bioengineered vascular grafts.,GSE216992,GSE216992,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001981,vascular graft,,luna,Loeys-Dietz syndrome,TGFBR1A230T/+,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.8735156190764615,platform_constant,4.8735156190764615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38718134,,GSM6703212,,,val,hesrt,samples/GSE216992/GSM6703212,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 0.98, ""disease_status"": 0.64, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM6703213,blood vessel,disease,,blood vessel,engineered tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,865,Spatial transcriptomic profiling of Patient and Patient-corrected bioengineered vascular grafts.,GSE216992,GSE216992,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001981,vascular graft,,luna,Loeys-Dietz syndrome,TGFBR1A230T/+,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.872153563800366,platform_constant,4.872153563800366,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38718134,,GSM6703213,,,val,hesrt,samples/GSE216992/GSM6703213,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6703214,blood vessel,normal,,blood vessel,engineered tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1100,Spatial transcriptomic profiling of Patient and Patient-corrected bioengineered vascular grafts.,GSE216992,GSE216992,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001981,vascular graft,,luna,,TGFBR1+/+,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.545990832864003,platform_constant,4.545990832864003,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38718134,,GSM6703214,,,val,hesrt,samples/GSE216992/GSM6703214,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6703215,blood vessel,normal,,blood vessel,engineered tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,626,Spatial transcriptomic profiling of Patient and Patient-corrected bioengineered vascular grafts.,GSE216992,GSE216992,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001981,vascular graft,,luna,,TGFBR1+/+,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.3504615208856645,platform_constant,4.3504615208856645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38718134,,GSM6703215,,,val,hesrt,samples/GSE216992/GSM6703215,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6704280,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,2522,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,GSE217058,GSE217058,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,control (NaCl),luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.172727152969999,platform_constant,4.172727152969999,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704280,,,train,hesrt,samples/GSE217058/GSM6704280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6704281,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,2831,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,GSE217058,GSE217058,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Rhynchophylline 100 mg/kg,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.21909098165926,platform_constant,4.21909098165926,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,CG-01e320e18183,cross_gse_redeposit,GSM6751446,train,hesrt,samples/GSE217058/GSM6704281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6704282,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,2752,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,GSE217058,GSE217058,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,control (NaCl),luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.244545553103787,platform_constant,4.244545553103787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,CG-19149e4dee98,cross_gse_redeposit,GSM6751447,train,hesrt,samples/GSE217058/GSM6704282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6704283,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,2816,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,GSE217058,GSE217058,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Rhynchophylline 100 mg/kg,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.122046120297179,platform_constant,4.122046120297179,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704283,,,train,hesrt,samples/GSE217058/GSM6704283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6704284,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2108,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,GSE217058,GSE217058,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,control (NaCl),luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.145454462545453,platform_constant,4.145454462545453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704284,,,train,hesrt,samples/GSE217058/GSM6704284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6704285,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2639,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,GSE217058,GSE217058,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Rhynchophylline 100 mg/kg,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.180908967906745,platform_constant,4.180908967906745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704285,,,train,hesrt,samples/GSE217058/GSM6704285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6704286,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2741,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,GSE217058,GSE217058,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,control (NaCl),luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.280000060690389,platform_constant,4.280000060690389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704286,,,train,hesrt,samples/GSE217058/GSM6704286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6704287,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3128,Probing pathways by which rhynchophylline modifies sleep using spatial transcriptomics,GSE217058,GSE217058,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Rhynchophylline 100 mg/kg,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.148181918650781,platform_constant,4.148181918650781,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37143153,10.1186/s13062-023-00377-7,GSM6704287,,,train,hesrt,samples/GSE217058/GSM6704287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8811056,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),1256,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237+GSE290350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0012249,Ectocervix,,luna,,Control,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.193595338302552,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811056,,,train,sda-all,samples/GSE217237/GSM8811056,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.97, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8811057,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),825,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237+GSE290350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,Control,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.190844730238008,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811057,,,train,sda-all,samples/GSE217237/GSM8811057,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8811058,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),1431,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237+GSE290350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0012249,Ectocervix,,luna,,Control,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.190827160760025,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811058,,,train,sda-all,samples/GSE217237/GSM8811058,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8811059,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),2004,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237+GSE290350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0012249,Ectocervix,,luna,,Control,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.189794021561102,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811059,,,train,sda-all,samples/GSE217237/GSM8811059,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8811060,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),2749,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237+GSE290350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,Control,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.182735862319515,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811060,,,train,sda-all,samples/GSE217237/GSM8811060,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8811061,uterus,disease,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),978,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237+GSE290350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,HIV,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.18957473846797,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811061,,,train,sda-all,samples/GSE217237/GSM8811061,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8811062,uterus,not stated,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),840,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237+GSE290350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,HIV,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.1852193664007125,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811062,,,train,sda-all,samples/GSE217237/GSM8811062,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 0.99, ""disease_status"": 0.15, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8811063,uterus,disease,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),1171,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237+GSE290350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,HIV,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.190664244444907,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811063,,,train,sda-all,samples/GSE217237/GSM8811063,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8811064,uterus,disease,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),679,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237+GSE290350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,HIV,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.188455598499822,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811064,,,train,sda-all,samples/GSE217237/GSM8811064,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8811065,uterus,disease,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),1180,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237+GSE290350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,HIV,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.189384012662235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM8811065,,,train,sda-all,samples/GSE217237/GSM8811065,sda-tissue-disease-2.3,"{""organ"": 0.44, ""sample_kind"": 0.98, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9044528,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),760,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.140202068395069,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044528,,,train,sda-all,samples/GSE217237/GSM9044528,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9044529,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),1124,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.140134807775836,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044529,,,train,sda-all,samples/GSE217237/GSM9044529,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9044530,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),1280,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.139932461697267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044530,,,train,sda-all,samples/GSE217237/GSM9044530,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9044531,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),712,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.185614889970947,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044531,,,train,sda-all,samples/GSE217237/GSM9044531,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9044532,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),418,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.185244073932617,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044532,,,train,sda-all,samples/GSE217237/GSM9044532,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9044533,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),307,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.185861928923784,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044533,,,train,sda-all,samples/GSE217237/GSM9044533,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9044534,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),969,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.1400341835241585,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044534,,,train,sda-all,samples/GSE217237/GSM9044534,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9044535,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,blue bright-field stain (heuristic),1130,Prospective transcriptional landscape of ectocervix samples from Kenyan cohort,GSE217237,GSE217237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,Ectocervix,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.1859269702964585,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35533147;37004130;39439565;39687623;39762272;41218071,,GSM9044535,,,train,sda-all,samples/GSE217237/GSM9044535,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6716963,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2887,Liver metastases originating from 4 colorectal cancer patients (CRC-LM).,GSE217414,GSE217414,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver Metastasis,MONDO:1060297;MONDO:0024331,luna,colorectal cancer liver metastasis,FOLFIRI+Cetuximab/Irinotecan+Cetuximab,age rule: bare number read as years,aged,71,extracted field,female,GSE217414:Patient 1,Patient 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.311973675048798,platform_constant,4.311973675048798,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37144485,,GSM6716963,,,test,hesrt,samples/GSE217414/GSM6716963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6716964,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3379,Liver metastases originating from 4 colorectal cancer patients (CRC-LM).,GSE217414,GSE217414,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver Metastasis,MONDO:1060297;MONDO:0024331,luna,colorectal cancer liver metastasis,FOLFOX,age rule: bare number read as years,aged,84,extracted field,female,GSE217414:Patient 2,Patient 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.344437002092949,platform_constant,4.344437002092949,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37144485,,GSM6716964,,,test,hesrt,samples/GSE217414/GSM6716964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6716965,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2091,Liver metastases originating from 4 colorectal cancer patients (CRC-LM).,GSE217414,GSE217414,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver Metastasis,MONDO:1060297;MONDO:0024331,luna,colorectal cancer liver metastasis,FOLFOX,age rule: bare number read as years,aged,69,extracted field,male,GSE217414:Patient 3,Patient 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.1869890179338585,platform_constant,4.1869890179338585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37144485,,GSM6716965,,,test,hesrt,samples/GSE217414/GSM6716965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6716966,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2317,Liver metastases originating from 4 colorectal cancer patients (CRC-LM).,GSE217414,GSE217414,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver Metastasis,MONDO:1060297;MONDO:0024331,luna,colorectal cancer liver metastasis,FOLFOX+Cetuximab/Xeloda+Cetuximab,age rule: bare number read as years,adult,64,extracted field,female,GSE217414:Patient 4,Patient 4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.199622358083467,platform_constant,4.199622358083467,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37144485,,GSM6716966,,,test,hesrt,samples/GSE217414/GSM6716966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6722694,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,801,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.2136713815532465,platform_constant,4.2136713815532465,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722694,,,val,hesrt,samples/GSE217615/GSM6722694,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6722695,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,372,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,not building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.213392714350981,platform_constant,4.213392714350981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722695,,,val,hesrt,samples/GSE217615/GSM6722695,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722696,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,371,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,not building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.225827751078025,platform_constant,4.225827751078025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722696,,,val,hesrt,samples/GSE217615/GSM6722696,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722697,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,445,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,not building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.2169822238258865,platform_constant,4.2169822238258865,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722697,,,val,hesrt,samples/GSE217615/GSM6722697,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6722698,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,399,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,not building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.226275394359665,platform_constant,4.226275394359665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722698,,,val,hesrt,samples/GSE217615/GSM6722698,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722699,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,838,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.226275394359701,platform_constant,4.226275394359701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722699,,,val,hesrt,samples/GSE217615/GSM6722699,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM6722700,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,747,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.228066916268279,platform_constant,4.228066916268279,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722700,,,val,hesrt,samples/GSE217615/GSM6722700,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6722701,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,611,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.228066916268269,platform_constant,4.228066916268269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722701,,,val,hesrt,samples/GSE217615/GSM6722701,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722702,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,499,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.226275394359701,platform_constant,4.226275394359701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722702,,,val,hesrt,samples/GSE217615/GSM6722702,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722703,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,367,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,not building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.219663568358367,platform_constant,4.219663568358367,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722703,,,val,hesrt,samples/GSE217615/GSM6722703,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6722704,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,529,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,not building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.231540513335237,platform_constant,4.231540513335237,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722704,,,val,hesrt,samples/GSE217615/GSM6722704,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6722705,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,430,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,not building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.215624967750463,platform_constant,4.215624967750463,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722705,,,val,hesrt,samples/GSE217615/GSM6722705,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6722706,brain,normal,,telencephalon,primary tissue,Mchenga conophoros,,adult,unknown,Visium,Visium,True,H&E,346,Cellular profiling of a recently-evolved social behavior [spatial transcriptomics],GSE217615,GSE217615+GSE217619,35575,Mchenga conophoros,35575,,False,False,GEO organism field,Mchenga conophoros,,luna,UBERON:0001893,Telencephalon,,luna,,not building,luna,adult,adult (>180 days),not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32471,counts,pixel,4.2319890089673,platform_constant,4.2319890089673,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37580322,10.1038/s41467-023-40331-9,GSM6722706,,,val,hesrt,samples/GSE217615/GSM6722706,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7100173,thymus,perturbation,,thymus,primary tissue,Mus musculus,house mouse,adult,female,BMK S1000,BMKMANU S1000/S3000,False,,440671,Decoding Trp53 regulatory program in various tissues and organs,GSE217664,GSE217664,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,Thymus,,luna,,Trp53-/-,age rule: age with unit,adult,17 weeks,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,54838,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40887856,,GSM7100173,,,train,sda-all,samples/GSE217664/GSM7100173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7100174,thymus,perturbation,,thymus,primary tissue,Mus musculus,house mouse,adult,female,BMK S1000,BMKMANU S1000/S3000,False,,1116860,Decoding Trp53 regulatory program in various tissues and organs,GSE217664,GSE217664,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,Thymus,,luna,,Trp53-/-,age rule: age with unit,adult,21 weeks,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,54838,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40887856,,GSM7100174,,,train,sda-all,samples/GSE217664/GSM7100174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7100175,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,adult,female,BMK S1000,BMKMANU S1000/S3000,False,,1128950,Decoding Trp53 regulatory program in various tissues and organs,GSE217664,GSE217664,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,Thymus,,luna,,Trp53+/+,age rule: age with unit,adult,17 weeks,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,54838,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40887856,,GSM7100175,,,train,sda-all,samples/GSE217664/GSM7100175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6727274,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2823,YAP Drives Assembly of a Spatially Colocalized Cellular Triad Required for Heart Renewal,GSE217828,GSE217828,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Control,luna,adult,8-10 weeks old adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.6493369596450738,platform_constant,0.6493369596450738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38510108,,GSM6727274,,,train,hesrt,samples/GSE217828/GSM6727274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6727275,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2826,YAP Drives Assembly of a Spatially Colocalized Cellular Triad Required for Heart Renewal,GSE217828,GSE217828,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,YAP5SA,luna,adult,8-10 weeks old adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.6493369596450738,platform_constant,0.6493369596450738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38510108,,GSM6727275,,,train,hesrt,samples/GSE217828/GSM6727275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6727528,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3444,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer - Spatial transcriptomics of mouse PDAC samples,GSE217843,GSE217843,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Tumor,MONDO:0005184,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.9583369131797115,platform_constant,4.9583369131797115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37914939,,GSM6727528,,,train,hesrt,samples/GSE217843/GSM6727528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6727529,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,undetermined,3822,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer - Spatial transcriptomics of mouse PDAC samples,GSE217843,GSE217843+GSE217847,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Tumor,MONDO:0005184,luna,,WT,luna,not stated,,extracted field,F,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.918473993149475,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37914939,,GSM6727529,,,train,sda-all,samples/GSE217843/GSM6727529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7655264,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,10060,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LPDAC30,Patient LPDAC30,,,release v3,sequencing-based,other,,,cell,97,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655264,,,train,sda-all,samples/GSE217847/GSM7655264,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655265,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,20754,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LPDAC30,Patient LPDAC30,,,release v3,sequencing-based,other,,,cell,97,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655265,,,train,sda-all,samples/GSE217847/GSM7655265,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655266,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,11116,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LPDAC30,Patient LPDAC30,,,release v3,sequencing-based,other,,,cell,98,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655266,,,train,sda-all,samples/GSE217847/GSM7655266,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655267,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,15188,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LIMET10,Patient LIMET10,,,release v3,sequencing-based,other,,,cell,98,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655267,,,train,sda-all,samples/GSE217847/GSM7655267,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655268,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,4395,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LIMET49,Patient LIMET49,,,release v3,sequencing-based,other,,,cell,96,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655268,,,train,sda-all,samples/GSE217847/GSM7655268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655269,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,2035,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LIMET139,Patient LIMET139,,,release v3,sequencing-based,other,,,cell,91,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655269,,,train,sda-all,samples/GSE217847/GSM7655269,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655270,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,4050,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LIMET162,Patient LIMET162,,,release v3,sequencing-based,other,,,cell,97,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655270,,,train,sda-all,samples/GSE217847/GSM7655270,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655271,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,14400,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LIMET163,Patient LIMET163,,,release v3,sequencing-based,other,,,cell,97,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655271,,,train,sda-all,samples/GSE217847/GSM7655271,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7655272,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,18724,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LIMET163,Patient LIMET163,,,release v3,sequencing-based,other,,,cell,97,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655272,,,train,sda-all,samples/GSE217847/GSM7655272,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655273,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,8289,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LIMET165,Patient LIMET165,,,release v3,sequencing-based,other,,,cell,97,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655273,,,train,sda-all,samples/GSE217847/GSM7655273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7655274,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,15620,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LIMET165,Patient LIMET165,,,release v3,sequencing-based,other,,,cell,98,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655274,,,train,sda-all,samples/GSE217847/GSM7655274,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655275,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,22290,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LIMET325,Patient LIMET325,,,release v3,sequencing-based,other,,,cell,98,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655275,,,train,sda-all,samples/GSE217847/GSM7655275,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7655276,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Other,not named in GEO,False,,2425,IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer,GSE217847,GSE217847+GSE237846,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary tumor,MONDO:0005184,luna,PDAC,,luna,not stated,,not stated,,GSE217847:Patient LIMET325,Patient LIMET325,,,release v3,sequencing-based,other,,,cell,94,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,37914939,,GSM7655276,,,train,sda-all,samples/GSE217847/GSM7655276,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6733377,bone,disease,tibia fracture;neurofibromatosis type 1,tibia,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3045,Spatial transcriptomic analysis of a pre-clinical NF1 pseudarthrosis fracture model,GSE218046,GSE218046,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000979,Distal tibia fracture callus,MONDO:0005320;MONDO:0018975,luna,,10-day post-surgery,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,0.44052863436123346,platform_constant,0.5000023910312669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38990653,,GSM6733377,,,train,hesrt,samples/GSE218046/GSM6733377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM6733378,bone,disease,tibia fracture;neurofibromatosis type 1,tibia,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3335,Spatial transcriptomic analysis of a pre-clinical NF1 pseudarthrosis fracture model,GSE218046,GSE218046,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000979,Distal tibia fracture callus,MONDO:0005320;MONDO:0018975,luna,,10-day post-surgery,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,0.44052863436123346,platform_constant,0.49999479280574033,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38990653,,GSM6733378,,,train,hesrt,samples/GSE218046/GSM6733378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM6751471,blood vessel,normal,,pulmonary vein,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),650,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002016,donor heart,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.670762685829737,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751471,,,train,sda-all,samples/GSE218539/GSM6751471,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6751472,heart,normal,,left atrium auricular region,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),1015,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006630,donor heart,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.501209993905942,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751472,,,train,sda-all,samples/GSE218539/GSM6751472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6751473,blood vessel,normal,,pulmonary vein,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E-like (heuristic),1095,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002016,donor heart,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.01853952468702,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751473,,,train,sda-all,samples/GSE218539/GSM6751473,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM6751474,heart,normal,,left atrium auricular region,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E-like (heuristic),1110,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006630,donor heart,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.029760173368945,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751474,,,train,sda-all,samples/GSE218539/GSM6751474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6751475,blood vessel,normal,,pulmonary vein,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E-like (heuristic),1641,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002016,donor lung,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.582361090968574,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751475,,,train,sda-all,samples/GSE218539/GSM6751475,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6751476,blood vessel,normal,,pulmonary vein,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),574,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002016,donor lung,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.673743470949609,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751476,,,train,sda-all,samples/GSE218539/GSM6751476,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6751477,blood vessel,normal,,pulmonary vein,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),973,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002016,donor lung,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.691214479033165,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751477,,,train,sda-all,samples/GSE218539/GSM6751477,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6751478,blood vessel,normal,,pulmonary vein,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),515,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002016,donor lung,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.635443473054003,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751478,,,train,sda-all,samples/GSE218539/GSM6751478,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6751479,blood vessel,normal,,pulmonary vein,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),663,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002016,donor lung,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.652633679050158,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751479,,,train,sda-all,samples/GSE218539/GSM6751479,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6751480,blood vessel,normal,,pulmonary vein,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),2373,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002016,donor lung,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.59728282645702,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751480,,,train,sda-all,samples/GSE218539/GSM6751480,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM6751481,blood vessel,normal,,pulmonary vein,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E-like (heuristic),1061,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002016,donor lung,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.544792653300453,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751481,,,train,sda-all,samples/GSE218539/GSM6751481,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6751482,blood vessel,normal,,pulmonary vein,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E-like (heuristic),566,Spatial Transcriptomics in the Human Left Atrial Appendage and Pulmonary Vein Sleeve,GSE218539,GSE218539,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0002016,donor heart,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.605003404431988,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41314481,,GSM6751482,,,train,sda-all,samples/GSE218539/GSM6751482,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6756178,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1935,Cardiac reprogramming and Gata4 overexpression reduce fibrosis and improve diastolic dysfunction in heart failure with preserved ejection fraction,GSE218761,GSE218761,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart transverse section,,luna,,Ctrl,age rule: age with unit,adult,15 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,0.7575540190785702,platform_constant,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39673349,10.1161/circulationaha.123.067504,GSM6756178,,,test,hesrt,samples/GSE218761/GSM6756178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6756179,heart,disease,heart failure,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2157,Cardiac reprogramming and Gata4 overexpression reduce fibrosis and improve diastolic dysfunction in heart failure with preserved ejection fraction,GSE218761,GSE218761,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart transverse section,MONDO:0005252,luna,heart failure with preserved ejection fraction,TTg_HF,age rule: age with unit,adult,15 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,0.7575540190785702,platform_constant,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39673349,10.1161/circulationaha.123.067504,GSM6756179,,,test,hesrt,samples/GSE218761/GSM6756179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM6756180,heart,disease,heart failure,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2994,Cardiac reprogramming and Gata4 overexpression reduce fibrosis and improve diastolic dysfunction in heart failure with preserved ejection fraction,GSE218761,GSE218761,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart transverse section,MONDO:0005252,luna,heart failure with preserved ejection fraction,Ctrl_HF,age rule: age with unit,adult,15 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,0.7575540190785702,platform_constant,0.7575540190785702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39673349,10.1161/circulationaha.123.067504,GSM6756180,,,test,hesrt,samples/GSE218761/GSM6756180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM6760693,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E-like (heuristic),2454,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,GSE218951,GSE218951,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,primary breast cancer,MONDO:0007254,luna,,,age rule: age in years,aged,70 year-old,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.993312739156748,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760693,,,train,sda-all,samples/GSE218951/GSM6760693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6760694,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E-like (heuristic),2551,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,GSE218951,GSE218951,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,primary breast cancer,MONDO:0007254,luna,,,age rule: age in years,aged,70 year-old,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.993217798025974,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760694,,,train,sda-all,samples/GSE218951/GSM6760694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6760695,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E-like (heuristic),3244,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,GSE218951,GSE218951,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,primary breast cancer,MONDO:0005494,luna,,,age rule: age in years,aged,84 year-old,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.024040512900366,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760695,,,train,sda-all,samples/GSE218951/GSM6760695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6760696,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E-like (heuristic),3202,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,GSE218951,GSE218951,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,primary breast cancer,MONDO:0005494,luna,,,age rule: age in years,aged,84 year-old,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.9940313907466214,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760696,,,train,sda-all,samples/GSE218951/GSM6760696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6760697,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E-like (heuristic),2284,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,GSE218951,GSE218951,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,primary breast cancer,MONDO:0007254,luna,,,age rule: age in years,aged,71 year-old,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.284762259725873,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760697,,,train,sda-all,samples/GSE218951/GSM6760697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6760698,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E-like (heuristic),1899,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,GSE218951,GSE218951,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,primary breast cancer,MONDO:0007254,luna,,,age rule: age in years,aged,71 year-old,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.159626938764066,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760698,,,train,sda-all,samples/GSE218951/GSM6760698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6760699,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E-like (heuristic),3099,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,GSE218951,GSE218951,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,primary breast cancer,MONDO:0007254,luna,,,age rule: age in years,adult,52 year-old,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.162403846527313,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760699,,,train,sda-all,samples/GSE218951/GSM6760699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6760700,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E-like (heuristic),3173,Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment,GSE218951,GSE218951,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,primary breast cancer,MONDO:0007254,luna,,,age rule: age in years,adult,52 year-old,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.1592966167190895,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM6760700,,,train,sda-all,samples/GSE218951/GSM6760700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6761309,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1171,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,0 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.568311539181383,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761309,,,train,sda-all,samples/GSE218970/GSM6761309,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM6761310,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1261,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,0 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.564670534154498,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761310,,,train,sda-all,samples/GSE218970/GSM6761310,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM6761313,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1791,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,1 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.57316111754209,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761313,,,train,sda-all,samples/GSE218970/GSM6761313,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.71}",,
GSM6761314,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1620,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,1 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.56604689062661,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761314,,,train,sda-all,samples/GSE218970/GSM6761314,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": NaN, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM6761315,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1819,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,1 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.565809595299593,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761315,,,train,sda-all,samples/GSE218970/GSM6761315,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM6761316,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1724,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,1 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.560197036039525,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761316,,,train,sda-all,samples/GSE218970/GSM6761316,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM6761317,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1765,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,3 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.565952278540959,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761317,,,train,sda-all,samples/GSE218970/GSM6761317,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM6761318,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1655,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,3 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.563688508769138,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761318,,,train,sda-all,samples/GSE218970/GSM6761318,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": NaN, ""life_stage"": 0.6000000000000001}",,
GSM6761319,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1717,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,3 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.561787157328966,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761319,,,train,sda-all,samples/GSE218970/GSM6761319,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.6900000000000001}",,
GSM6761320,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1652,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,3 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.569378787487738,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761320,,,train,sda-all,samples/GSE218970/GSM6761320,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": NaN, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM6761321,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1257,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,6 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.570027840773442,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761321,,,train,sda-all,samples/GSE218970/GSM6761321,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": NaN, ""life_stage"": 0.63}",,
GSM6761322,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1314,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,6 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.5626347940849294,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761322,,,train,sda-all,samples/GSE218970/GSM6761322,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.7000000000000001}",,
GSM6761323,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1402,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,6 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.568744146405088,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761323,,,train,sda-all,samples/GSE218970/GSM6761323,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.74}",,
GSM6761324,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1313,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,6 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.562511001124008,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761324,,,train,sda-all,samples/GSE218970/GSM6761324,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.65}",,
GSM6761325,plant,normal,,,primary tissue,Hordeum vulgare,barley,adult,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1805,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,adult,24 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.572083402525098,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761325,,,train,sda-all,samples/GSE218970/GSM6761325,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": NaN, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM6761326,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1696,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,24 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.560022612908707,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761326,,,train,sda-all,samples/GSE218970/GSM6761326,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.29}",life_stage,low_confidence_annotation
GSM6761327,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1858,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,24 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.566283081673143,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761327,,,train,sda-all,samples/GSE218970/GSM6761327,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM6761328,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1701,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,24 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.560199967776959,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761328,,,train,sda-all,samples/GSE218970/GSM6761328,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM6761329,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1591,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,24 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.555236200327467,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761329,,,train,sda-all,samples/GSE218970/GSM6761329,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.76}",,
GSM6761330,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1632,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,24 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.564181138038683,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761330,,,train,sda-all,samples/GSE218970/GSM6761330,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM6761331,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1736,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,24 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.558893050486723,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761331,,,train,sda-all,samples/GSE218970/GSM6761331,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM6761332,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1800,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,24 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.565163493568598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761332,,,train,sda-all,samples/GSE218970/GSM6761332,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.28}",life_stage,low_confidence_annotation
GSM6761333,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1721,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,24 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.566347522423131,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761333,,,train,sda-all,samples/GSE218970/GSM6761333,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.76}",,
GSM6761334,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1752,A Spatial Transcriptome for Germinating Barley Grain,GSE218970,GSE218970,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,germinating grain,,luna,,,luna,not stated,24 HAI,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39876,counts,um,1.0,verified,4.560899489751088,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37351575,,GSM6761334,,,train,sda-all,samples/GSE218970/GSM6761334,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM6774303,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,783,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W12,not stated,,GSE219120:XDD369,XDD369,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.148883752011664,platform_constant,4.148883752011664,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774303,,,train,hesrt,samples/GSE219120/GSM6774303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6774304,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1202,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W12,not stated,,GSE219120:XDD369,XDD369,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.14892229303872,platform_constant,4.14892229303872,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774304,,,train,hesrt,samples/GSE219120/GSM6774304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6774305,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1454,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W12,not stated,,GSE219120:XDD369,XDD369,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.148922293038691,platform_constant,4.148922293038691,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774305,,,train,hesrt,samples/GSE219120/GSM6774305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6774306,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1378,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W12,not stated,,GSE219120:XDD369,XDD369,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.148883752011664,platform_constant,4.148883752011664,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774306,,,train,hesrt,samples/GSE219120/GSM6774306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6774307,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,1100,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,embryonic,W08,not stated,,GSE219120:XDD376,XDD376,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.14892229303873,platform_constant,4.14892229303873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774307,,,train,hesrt,samples/GSE219120/GSM6774307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM6774308,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,1673,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,embryonic,W08,not stated,,GSE219120:XDD376,XDD376,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.14892229303873,platform_constant,4.14892229303873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774308,,,train,hesrt,samples/GSE219120/GSM6774308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6774309,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,1251,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,embryonic,W08,not stated,,GSE219120:XDD376,XDD376,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.14892229303873,platform_constant,4.14892229303873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774309,,,train,hesrt,samples/GSE219120/GSM6774309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM6774310,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,1527,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,embryonic,W08,not stated,,GSE219120:XDD376,XDD376,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.14892229303873,platform_constant,4.14892229303873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774310,,,train,hesrt,samples/GSE219120/GSM6774310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6774311,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1764,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W09,not stated,,GSE219120:XDD373,XDD373,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774311,,,train,hesrt,samples/GSE219120/GSM6774311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM6774312,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1553,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W09,not stated,,GSE219120:XDD373,XDD373,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774312,,,train,hesrt,samples/GSE219120/GSM6774312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM6774313,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,765,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W09,not stated,,GSE219120:XDD373,XDD373,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774313,,,train,hesrt,samples/GSE219120/GSM6774313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM6774314,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,709,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W09,not stated,,GSE219120:XDD373,XDD373,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774314,,,train,hesrt,samples/GSE219120/GSM6774314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM6774315,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,118,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,embryonic,W05,not stated,,GSE219120:XHU346,XHU346,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666756,platform_constant,4.193103351666756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774315,,,train,hesrt,samples/GSE219120/GSM6774315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.97}",,
GSM6774316,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,82,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,embryonic,W05,not stated,,GSE219120:XHU346,XHU346,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774316,,,train,hesrt,samples/GSE219120/GSM6774316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM6774317,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1290,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W12,not stated,,GSE219120:XDD369,XDD369,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774317,,,train,hesrt,samples/GSE219120/GSM6774317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6774318,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1791,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W12,not stated,,GSE219120:XDD369,XDD369,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774318,,,train,hesrt,samples/GSE219120/GSM6774318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM6774319,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,107,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,embryonic,W05,not stated,,GSE219120:XHU346,XHU346,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774319,,,train,hesrt,samples/GSE219120/GSM6774319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM6774320,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,131,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,embryonic,W05,not stated,,GSE219120:XHU346,XHU346,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774320,,,train,hesrt,samples/GSE219120/GSM6774320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM6774321,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,101,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,embryonic,W05,not stated,,GSE219120:XHU346,XHU346,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774321,,,train,hesrt,samples/GSE219120/GSM6774321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM6774322,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,77,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,embryonic,W05,not stated,,GSE219120:XHU346,XHU346,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193103351666767,platform_constant,4.193103351666767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774322,,,train,hesrt,samples/GSE219120/GSM6774322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM6774323,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1564,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W12,not stated,,GSE219120:XDD369,XDD369,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.14892229303873,platform_constant,4.14892229303873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774323,,,train,hesrt,samples/GSE219120/GSM6774323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6774324,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1579,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W12,not stated,,GSE219120:XDD369,XDD369,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.176222772511594,platform_constant,4.176222772511594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774324,,,train,hesrt,samples/GSE219120/GSM6774324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM6774325,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1633,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W12,not stated,,GSE219120:XDD369,XDD369,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.193064400223873,platform_constant,4.193064400223873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774325,,,train,hesrt,samples/GSE219120/GSM6774325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.88}",,
GSM6774326,spinal cord,normal,,spinal cord,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1504,Spatiotemporal multi-omics decoding of the developing human spinal cord I,GSE219120,GSE219120+GSE219122,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,spinal cord,,luna,,,luna,fetal,W12,not stated,,GSE219120:XDD369,XDD369,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.176222772511575,platform_constant,4.176222772511575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37095395,10.1038/s41593-023-01312-9,GSM6774326,,,train,hesrt,samples/GSE219120/GSM6774326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6796864,blood vessel,disease,coronary atherosclerosis;familial hypercholesterolemia,right coronary artery,primary tissue,Sus scrofa,pig,adult,female,Visium,Visium,True,H&E,2196,Insulin-like growth factor I reduces coronary atherosclerosis in pigs with familial hypercholesterolemia,GSE220218,GSE220218,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001625,Right coronary artery,MONDO:0021661;MONDO:0005439,luna,,IGF1,luna,adult,20 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21303,counts,pixel,4.776003421428912,platform_constant,4.776003421428912,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36602878,,GSM6796864,,,train,hesrt,samples/GSE220218/GSM6796864,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6796865,blood vessel,disease,coronary atherosclerosis;familial hypercholesterolemia,right coronary artery,primary tissue,Sus scrofa,pig,adult,female,Visium,Visium,True,H&E,1621,Insulin-like growth factor I reduces coronary atherosclerosis in pigs with familial hypercholesterolemia,GSE220218,GSE220218,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001625,Right coronary artery,MONDO:0021661;MONDO:0005439,luna,,IGF1,luna,adult,20 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21303,counts,pixel,5.568333395810019,platform_constant,5.568333395810019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36602878,,GSM6796865,,,train,hesrt,samples/GSE220218/GSM6796865,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6796866,blood vessel,disease,coronary atherosclerosis;familial hypercholesterolemia,right coronary artery,primary tissue,Sus scrofa,pig,adult,female,Visium,Visium,True,H&E,1441,Insulin-like growth factor I reduces coronary atherosclerosis in pigs with familial hypercholesterolemia,GSE220218,GSE220218,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001625,Right coronary artery,MONDO:0021661;MONDO:0005439,luna,,control,luna,adult,20 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21303,counts,pixel,5.55416664361686,platform_constant,5.55416664361686,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36602878,,GSM6796866,,,train,hesrt,samples/GSE220218/GSM6796866,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6796867,blood vessel,disease,coronary atherosclerosis;familial hypercholesterolemia,right coronary artery,primary tissue,Sus scrofa,pig,adult,female,Visium,Visium,True,H&E,963,Insulin-like growth factor I reduces coronary atherosclerosis in pigs with familial hypercholesterolemia,GSE220218,GSE220218,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001625,Right coronary artery,MONDO:0021661;MONDO:0005439,luna,,control,luna,adult,20 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21303,counts,pixel,5.547500030760883,platform_constant,5.547500030760883,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36602878,,GSM6796867,,,train,hesrt,samples/GSE220218/GSM6796867,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6806992,skin,normal,,prepuce of penis,primary tissue,Homo sapiens,human,neonatal or infant,male,Visium,Visium,True,H&E,659,Reconstruction of 3-dimensional tissue organization at the single-cell resolution [ST],GSE220572,GSE220572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001332,Foreskin,,luna,,,luna,neonatal or infant,Neonatal,extracted field,male,GSE220572:donor1,donor1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.983897548347086,platform_constant,4.983897548347086,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36711844;38915088,,GSM6806992,,,train,hesrt,samples/GSE220572/GSM6806992,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM6806993,skin,normal,,prepuce of penis,primary tissue,Homo sapiens,human,neonatal or infant,male,Visium,Visium,True,H&E,653,Reconstruction of 3-dimensional tissue organization at the single-cell resolution [ST],GSE220572,GSE220572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001332,Foreskin,,luna,,,luna,neonatal or infant,Neonatal,extracted field,male,GSE220572:donor1,donor1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.975097036798376,platform_constant,4.975097036798376,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36711844;38915088,,GSM6806993,,,train,hesrt,samples/GSE220572/GSM6806993,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM6820295,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1807,Spatial gene expression profile of the brain from WT and Sema6d-/- mice,GSE220799,GSE220799,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,juvenile,6–8 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,4.795038284650151,platform_constant,4.795038284650151,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39002542,,GSM6820295,,,train,hesrt,samples/GSE220799/GSM6820295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6820296,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2174,Spatial gene expression profile of the brain from WT and Sema6d-/- mice,GSE220799,GSE220799,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,juvenile,6–8 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,4.795038284650151,platform_constant,4.795038284650151,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39002542,,GSM6820296,,,train,hesrt,samples/GSE220799/GSM6820296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6820297,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2101,Spatial gene expression profile of the brain from WT and Sema6d-/- mice,GSE220799,GSE220799,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Sema6d-/-,age rule: age with unit,juvenile,6–8 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,4.3614505264359185,platform_constant,4.3614505264359185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39002542,,GSM6820297,,,train,hesrt,samples/GSE220799/GSM6820297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6820298,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2296,Spatial gene expression profile of the brain from WT and Sema6d-/- mice,GSE220799,GSE220799,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Sema6d-/-,age rule: age with unit,juvenile,6–8 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,4.79694654550583,platform_constant,4.79694654550583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39002542,,GSM6820298,,,train,hesrt,samples/GSE220799/GSM6820298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6820635,other,perturbation,,neck,primary tissue,Schmidtea mediterranea,freshwater planarian,not stated,unknown,Visium,Visium,False,,929,neuroendocrine control of planarian regeneration (Spatial transcriptome),GSE220817,GSE220817,79327,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,luna,UBERON:0000974,neck,,luna,,amputation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36035,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6820635,,,train,sda-all,samples/GSE220817/GSM6820635,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 0.97, ""disease_status"": 0.96, ""uberon"": 0.91, ""life_stage"": 0.76}",,
GSM6833484,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4199,Spatial Multi-omics Reveals the Heterogeneity of Tumor Microenvironment in the OSF-Associated OSCC,GSE220978,GSE220978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,OSF-associated OSCC,MONDO:0004958,luna,OSF-associated OSCC,OSF-associated OSCC,luna,not stated,,not stated,,GSE220978:Patient 1,Patient 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.272032412948065,platform_constant,4.272032412948065,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38229179,,GSM6833484,,,train,hesrt,samples/GSE220978/GSM6833484,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6833485,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4290,Spatial Multi-omics Reveals the Heterogeneity of Tumor Microenvironment in the OSF-Associated OSCC,GSE220978,GSE220978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,OSF-associated OSCC,MONDO:0004958,luna,OSF-associated OSCC,OSF-associated OSCC,luna,not stated,,not stated,,GSE220978:Patient 2,Patient 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.2720324129480645,platform_constant,4.2720324129480645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38229179,,GSM6833485,,,train,hesrt,samples/GSE220978/GSM6833485,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM6833486,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4514,Spatial Multi-omics Reveals the Heterogeneity of Tumor Microenvironment in the OSF-Associated OSCC,GSE220978,GSE220978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,OSF-associated OSCC,MONDO:0004958,luna,OSF-associated OSCC,OSF-associated OSCC,luna,not stated,,not stated,,GSE220978:Patient 3,Patient 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.244187368137843,platform_constant,4.244187368137843,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38229179,,GSM6833486,,,train,hesrt,samples/GSE220978/GSM6833486,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM6833487,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4316,Spatial Multi-omics Reveals the Heterogeneity of Tumor Microenvironment in the OSF-Associated OSCC,GSE220978,GSE220978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,OSF-associated OSCC,MONDO:0004958,luna,OSF-associated OSCC,OSF-associated OSCC,luna,not stated,,not stated,,GSE220978:Patient 4,Patient 4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.202784364767996,platform_constant,4.202784364767996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38229179,,GSM6833487,,,train,hesrt,samples/GSE220978/GSM6833487,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM6845429,brain,perturbation,,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERFISH,False,,38648,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,GSE221106,GSE221106,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,,luna,,PBS inoculation,age rule: postnatal day,juvenile,P53,extracted field,Female,,,,,release v3,imaging-based,MERFISH,,,cell,462,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,,,GSM6845429,,,val,sda-all,samples/GSE221106/GSM6845429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.63}",disease_status,low_confidence_annotation
GSM6845430,brain,disease,infectious disease,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERFISH,False,,36539,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,GSE221106,GSE221106,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,MONDO:0005550,mondo_predicate (Luna: perturbation),,GAS inoculation,age rule: postnatal day,juvenile,P53,extracted field,Female,,,,,release v3,imaging-based,MERFISH,,,cell,462,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,,,GSM6845430,,,val,sda-all,samples/GSE221106/GSM6845430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 0.91}",,
GSM6845431,brain,perturbation,,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERFISH,False,,30947,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,GSE221106,GSE221106,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,,luna,,PBS inoculation,age rule: postnatal day,adult,P53,extracted field,Female,,,,,release v3,imaging-based,MERFISH,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6845431,,,val,sda-all,samples/GSE221106/GSM6845431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 0.62}",disease_status,low_confidence_annotation
GSM6845432,brain,disease,infectious disease,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERFISH,False,,41242,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,GSE221106,GSE221106,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,MONDO:0005550,mondo_predicate (Luna: perturbation),,GAS inoculation,age rule: postnatal day,juvenile,P53,extracted field,Female,,,,,release v3,imaging-based,MERFISH,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6845432,,,val,sda-all,samples/GSE221106/GSM6845432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM6845433,brain,perturbation,,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERFISH,False,,29520,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,GSE221106,GSE221106,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,,luna,,PBS inoculation,age rule: postnatal day,adult,P53,extracted field,Female,,,,,release v3,imaging-based,MERFISH,,,cell,462,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,,,GSM6845433,,,val,sda-all,samples/GSE221106/GSM6845433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM6845434,brain,disease,infectious disease,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERFISH,False,,30327,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,GSE221106,GSE221106,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,MONDO:0005550,mondo_predicate (Luna: perturbation),,GAS inoculation,age rule: postnatal day,juvenile,P53,extracted field,Female,,,,,release v3,imaging-based,MERFISH,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM6845434,,,val,sda-all,samples/GSE221106/GSM6845434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.98, ""life_stage"": 0.91}",,
GSM6845435,brain,perturbation,,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERFISH,False,,67611,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,GSE221106,GSE221106,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,,luna,,PBS inoculation,age rule: postnatal day,adult,P53,extracted field,Female,,,,,release v3,imaging-based,MERFISH,,,cell,462,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,,,GSM6845435,,,val,sda-all,samples/GSE221106/GSM6845435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM6845436,brain,disease,infectious disease,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERFISH,False,,29551,Spatial analysis of microglial and vascular responses following recurrent intranasal Group A Streptococcus infections,GSE221106,GSE221106,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,MONDO:0005550,mondo_predicate (Luna: perturbation),,GAS inoculation,age rule: postnatal day,juvenile,P53,extracted field,Female,,,,,release v3,imaging-based,MERFISH,,,cell,462,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,,,GSM6845436,,,val,sda-all,samples/GSE221106/GSM6845436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM6859066,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,734,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],GSE221359,GSE221359,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:1060297;MONDO:0024331,luna,liver metastasis of colorectal cancer,Control,luna,not stated,,not stated,,GSE221359:Mouse 1,Mouse 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.461864366065149,platform_constant,4.461864366065149,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859066,,,train,hesrt,samples/GSE221359/GSM6859066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM6859067,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1284,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],GSE221359,GSE221359,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:1060297;MONDO:0024331,luna,liver metastasis of colorectal cancer,Resistant,luna,not stated,,not stated,,GSE221359:Mouse 1,Mouse 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.571186450048903,platform_constant,4.571186450048903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859067,,,train,hesrt,samples/GSE221359/GSM6859067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6859068,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1818,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],GSE221359,GSE221359,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:1060297;MONDO:0024331,luna,liver metastasis of colorectal cancer,Control,luna,not stated,,not stated,,GSE221359:Mouse 2,Mouse 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.622033986539709,platform_constant,4.622033986539709,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859068,,,train,hesrt,samples/GSE221359/GSM6859068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6859069,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1044,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],GSE221359,GSE221359,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:1060297;MONDO:0024331,luna,liver metastasis of colorectal cancer,Partial Responder,luna,not stated,,not stated,,GSE221359:Mouse 1,Mouse 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.668643996132931,platform_constant,4.668643996132931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859069,,,train,hesrt,samples/GSE221359/GSM6859069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM6859070,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1494,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],GSE221359,GSE221359,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:1060297;MONDO:0024331,luna,liver metastasis of colorectal cancer,Partial Responder,luna,not stated,,not stated,,GSE221359:Mouse 2,Mouse 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.360169484113136,platform_constant,4.360169484113136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859070,,,train,hesrt,samples/GSE221359/GSM6859070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6859071,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1158,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],GSE221359,GSE221359,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:1060297;MONDO:0024331,luna,liver metastasis of colorectal cancer,Resistant,luna,not stated,,not stated,,GSE221359:Mouse 2,Mouse 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.560169819629645,platform_constant,4.560169819629645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859071,,,train,hesrt,samples/GSE221359/GSM6859071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6859072,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1843,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],GSE221359,GSE221359,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:1060297;MONDO:0024331,luna,liver metastasis of colorectal cancer,Control,luna,not stated,,not stated,,GSE221359:Mouse 3,Mouse 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.412711969782344,platform_constant,4.412711969782344,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859072,,,train,hesrt,samples/GSE221359/GSM6859072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6859073,liver,disease,metastatic malignant neoplasm in the liver;colorectal carcinoma,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1544,In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases [Visium],GSE221359,GSE221359,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:1060297;MONDO:0024331,luna,liver metastasis of colorectal cancer,Partial Responder,luna,not stated,,not stated,,GSE221359:Mouse 3,Mouse 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.224603095307361,platform_constant,4.224603095307361,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37863068,,GSM6859073,,,train,hesrt,samples/GSE221359/GSM6859073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6886495,bone,normal,,skeletal element,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1305,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0004765,bone/cartilage,,luna,,RRST,age rule: postnatal day,neonatal or infant,4 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886495,,,train,hesrt,samples/GSE221571/GSM6886495,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.24, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886496,bone,normal,,skeletal element,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1202,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0004765,bone/cartilage,,luna,,RRST,age rule: postnatal day,neonatal or infant,4 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.148965623454878,platform_constant,4.148965623454878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886496,,,train,hesrt,samples/GSE221571/GSM6886496,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886497,bone,normal,,skeletal element,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1298,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0004765,bone/cartilage,,luna,,standard,age rule: postnatal day,neonatal or infant,4 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886497,,,train,hesrt,samples/GSE221571/GSM6886497,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.22, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886498,bone,normal,,skeletal element,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,2935,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0004765,bone/cartilage,,luna,,RRST,age rule: postnatal day,neonatal or infant,11 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.1134803392552035,platform_constant,4.1134803392552035,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886498,,,train,hesrt,samples/GSE221571/GSM6886498,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.25, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886499,bone,normal,,skeletal element,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1788,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0004765,bone/cartilage,,luna,,RRST,age rule: postnatal day,neonatal or infant,11 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.1418245466503665,platform_constant,4.1418245466503665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886499,,,train,hesrt,samples/GSE221571/GSM6886499,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.29, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886500,bone,normal,,skeletal element,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1240,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0004765,bone/cartilage,,luna,,standard,age rule: postnatal day,neonatal or infant,11 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886500,,,train,hesrt,samples/GSE221571/GSM6886500,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.26, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM6886501,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4426,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,RRST,luna,not stated,young mice,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.113450290404371,platform_constant,4.113450290404371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886501,,,train,hesrt,samples/GSE221571/GSM6886501,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM6886502,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4492,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,RRST,luna,not stated,young mice,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.148965623454898,platform_constant,4.148965623454898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886502,,,train,hesrt,samples/GSE221571/GSM6886502,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM6886503,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4159,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,RRST,luna,not stated,young mice,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.148959456754007,platform_constant,4.148959456754007,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886503,,,train,hesrt,samples/GSE221571/GSM6886503,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM6886504,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4166,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,RRST,luna,not stated,young mice,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.106484746764244,platform_constant,4.106484746764244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886504,,,train,hesrt,samples/GSE221571/GSM6886504,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM6886505,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4514,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,standard,luna,not stated,young mice,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.185886509912579,platform_constant,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886505,,,train,hesrt,samples/GSE221571/GSM6886505,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM6886506,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4332,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,standard,luna,not stated,young mice,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.185886509912579,platform_constant,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886506,,,train,hesrt,samples/GSE221571/GSM6886506,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM6886507,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4394,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,standard,luna,not stated,young mice,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.193097323315167,platform_constant,4.193097323315167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886507,,,train,hesrt,samples/GSE221571/GSM6886507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM6886508,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4114,Spatially resolved transcriptomic profiling of degraded and challenging fresh frozen samples,GSE221571,GSE221571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,standard,luna,not stated,young mice,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9958775931710244,platform_constant,3.9958775931710244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36720873,,GSM6886508,,,train,hesrt,samples/GSE221571/GSM6886508,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM6919905,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor19,Donor19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,28463,counts,pixel,3.9634956438888134,platform_constant,3.9634956438888134,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,GSM6919905,,,val,hesrt,samples/GSE222322/GSM6919905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919906,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4931,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor19,Donor19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,28463,counts,pixel,3.9634956438887956,platform_constant,3.9634956438887956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,GSM6919906,,,val,hesrt,samples/GSE222322/GSM6919906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6919907,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor19,Donor19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,28463,counts,pixel,3.923855315091428,platform_constant,3.923855315091428,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,GSM6919907,,,val,hesrt,samples/GSE222322/GSM6919907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919908,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4978,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor19,Donor19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,28463,counts,pixel,3.913938200789803,platform_constant,3.913938200789803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,GSM6919908,,,val,hesrt,samples/GSE222322/GSM6919908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6919909,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3431,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor43,Donor43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.924455548722752,platform_constant,3.924455548722752,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-c49624f02479,cross_gse_redeposit,GSM9721741,val,hesrt,samples/GSE222322/GSM6919909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6919910,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2977,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor43,Donor43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8946180901981813,platform_constant,3.8946180901981813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-dfe0e3cdd7c3,cross_gse_redeposit,GSM9721742,val,hesrt,samples/GSE222322/GSM6919910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919911,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4914,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L5/S1),,luna,,,luna,not stated,,not stated,,GSE222322:Donor47,Donor47,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.892535042032913,platform_constant,3.892535042032913,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-6c11a221fa6c,cross_gse_redeposit,GSM9721743,val,hesrt,samples/GSE222322/GSM6919911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919912,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4058,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L5/S1),,luna,,,luna,not stated,,not stated,,GSE222322:Donor47,Donor47,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9048611580319252,platform_constant,3.9048611580319252,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-577b1aad8c1f,cross_gse_redeposit,GSM9721744,val,hesrt,samples/GSE222322/GSM6919912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6919913,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3114,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor43,Donor43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9144098074291405,platform_constant,3.9144098074291405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-fa4422e0fb1f,cross_gse_redeposit,GSM9721745,val,hesrt,samples/GSE222322/GSM6919913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919914,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3054,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor43,Donor43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9199653708377475,platform_constant,3.9199653708377475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-039251b09952,cross_gse_redeposit,GSM9721746,val,hesrt,samples/GSE222322/GSM6919914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6919915,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4542,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L5/S1),,luna,,,luna,not stated,,not stated,,GSE222322:Donor47,Donor47,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.898958119787397,platform_constant,3.898958119787397,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-c950f3260c3b,cross_gse_redeposit,GSM9721747,val,hesrt,samples/GSE222322/GSM6919915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919916,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4728,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L5/S1),,luna,,,luna,not stated,,not stated,,GSE222322:Donor47,Donor47,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9048611580319252,platform_constant,3.9048611580319252,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-391ee27e97b5,cross_gse_redeposit,GSM9721748,val,hesrt,samples/GSE222322/GSM6919916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919917,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4966,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor45,Donor45,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9112848747916584,platform_constant,3.9112848747916584,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-de2a0aa72219,cross_gse_redeposit,GSM9721749,val,hesrt,samples/GSE222322/GSM6919917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919918,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4844,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor45,Donor45,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9217013562799443,platform_constant,3.9217013562799443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-b785e5283726,cross_gse_redeposit,GSM9721750,val,hesrt,samples/GSE222322/GSM6919918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919919,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4768,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor45,Donor45,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.892013646533197,platform_constant,3.892013646533197,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-0e3e5365de3d,cross_gse_redeposit,GSM9721751,val,hesrt,samples/GSE222322/GSM6919919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919920,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4642,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor45,Donor45,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.905034582392694,platform_constant,3.905034582392694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-475dce7d54b2,cross_gse_redeposit,GSM9721752,val,hesrt,samples/GSE222322/GSM6919920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919921,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3200,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor43,Donor43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9024512318765217,platform_constant,3.9024512318765217,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-db5acdd9bfd0,cross_gse_redeposit,GSM9721753,val,hesrt,samples/GSE222322/GSM6919921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919922,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2959,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L3/L4),,luna,,,luna,not stated,,not stated,,GSE222322:Donor43,Donor43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9405299923498136,platform_constant,3.9405299923498136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-c6ade025cfda,cross_gse_redeposit,GSM9721754,val,hesrt,samples/GSE222322/GSM6919922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919923,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4823,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L5/S1),,luna,,,luna,not stated,,not stated,,GSE222322:Donor47,Donor47,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.922530393173198,platform_constant,3.922530393173198,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-ac4940611c8c,cross_gse_redeposit,GSM9721755,val,hesrt,samples/GSE222322/GSM6919923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6919924,spinal cord,not stated,,lumbar spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4187,Spatial transcriptomics on human lumbar spinal cord,GSE222322,GSE222322,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Lumbar spinal cord (L5/S1),,luna,,,luna,not stated,,not stated,,GSE222322:Donor47,Donor47,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.914891911293575,platform_constant,3.914891911293575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36731429,,CG-e82cf7bb507e,cross_gse_redeposit,GSM9721756,val,hesrt,samples/GSE222322/GSM6919924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6921917,brain,disease,autism,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,74816,Developmental Deficits of MGE-derived Interneurons in the Cntnap2 Knockout Mouse Model of Autism Spectrum Disorder,GSE222383,GSE222383,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0005260,mondo_predicate (Luna: perturbation),,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,24901,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,36819097,,GSM6921917,,,train,sda-all,samples/GSE222383/GSM6921917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6922983,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1997,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.443007895463451,platform_constant,4.443007895463451,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922983,,,train,hesrt,samples/GSE222410/GSM6922983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922984,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2666,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,non sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.074536925170618,platform_constant,4.074536925170618,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922984,,,train,hesrt,samples/GSE222410/GSM6922984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922985,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2694,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.074536925170618,platform_constant,4.074536925170618,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922985,,,train,hesrt,samples/GSE222410/GSM6922985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6922986,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2711,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,non sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.441898135222222,platform_constant,4.441898135222222,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922986,,,train,hesrt,samples/GSE222410/GSM6922986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922987,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2631,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.074536925170618,platform_constant,4.074536925170618,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922987,,,train,hesrt,samples/GSE222410/GSM6922987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922988,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2494,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,non sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.074536925170627,platform_constant,4.074536925170627,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922988,,,train,hesrt,samples/GSE222410/GSM6922988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922989,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2997,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.043981449331831,platform_constant,4.043981449331831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922989,,,train,hesrt,samples/GSE222410/GSM6922989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6922990,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2306,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,non sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.041203840199422,platform_constant,4.041203840199422,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922990,,,train,hesrt,samples/GSE222410/GSM6922990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922991,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1967,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,non sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.073148003144079,platform_constant,4.073148003144079,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922991,,,train,hesrt,samples/GSE222410/GSM6922991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922992,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2072,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.062514286566326,platform_constant,4.062514286566326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922992,,,train,hesrt,samples/GSE222410/GSM6922992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922993,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3103,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,non sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.037337976095643,platform_constant,4.037337976095643,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922993,,,train,hesrt,samples/GSE222410/GSM6922993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922994,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2378,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.062514286566326,platform_constant,4.062514286566326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922994,,,train,hesrt,samples/GSE222410/GSM6922994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6922995,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2958,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,non sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.043357821894079,platform_constant,4.043357821894079,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922995,,,train,hesrt,samples/GSE222410/GSM6922995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922996,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2085,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.072453628485474,platform_constant,4.072453628485474,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922996,,,train,hesrt,samples/GSE222410/GSM6922996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6922997,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1736,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,non sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.044978598427247,platform_constant,4.044978598427247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922997,,,train,hesrt,samples/GSE222410/GSM6922997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6922998,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2634,Spatial transcriptomics reveals unique gene expression changes in different brain regions after sleep deprivation,GSE222410,GSE222410,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sleep deprived,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.071990700297742,platform_constant,4.071990700297742,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37925446,,GSM6922998,,,train,hesrt,samples/GSE222410/GSM6922998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6937699,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2903,Moxibustion Improves Hypothalamus Aqp4 Polarization in APP/PS1 Mice: Evidence from Spatial Transcriptomics,GSE222981,GSE222981,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.273224043715847,platform_constant,0.5000107993693169,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36819717,10.3389/fnagi.2023.1069155,GSM6937699,,,train,hesrt,samples/GSE222981/GSM6937699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6937700,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3023,Moxibustion Improves Hypothalamus Aqp4 Polarization in APP/PS1 Mice: Evidence from Spatial Transcriptomics,GSE222981,GSE222981,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP/PS1,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.273224043715847,platform_constant,0.4999972070120755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36819717,10.3389/fnagi.2023.1069155,GSM6937700,,,train,hesrt,samples/GSE222981/GSM6937700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6937701,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2962,Moxibustion Improves Hypothalamus Aqp4 Polarization in APP/PS1 Mice: Evidence from Spatial Transcriptomics,GSE222981,GSE222981,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP/PS1+MOX,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.273224043715847,platform_constant,0.49999657184386814,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36819717,10.3389/fnagi.2023.1069155,GSM6937701,,,train,hesrt,samples/GSE222981/GSM6937701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6938326,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,308,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,4 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,28349,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938326,,,train,sda-all,samples/GSE223020/GSM6938326,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6938327,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,369,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,4 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,29082,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938327,,,train,sda-all,samples/GSE223020/GSM6938327,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM6938328,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,443,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,4 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,25763,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938328,,,train,sda-all,samples/GSE223020/GSM6938328,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM6938329,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,369,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,4 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,31115,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938329,,,train,sda-all,samples/GSE223020/GSM6938329,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM6938330,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,431,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,4 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,31584,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938330,,,train,sda-all,samples/GSE223020/GSM6938330,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6938331,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,336,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,9 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,1251,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938331,,,train,sda-all,samples/GSE223020/GSM6938331,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6938332,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,332,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,9 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,1750,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938332,,,train,sda-all,samples/GSE223020/GSM6938332,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM6938333,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,335,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,9 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,1064,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938333,,,train,sda-all,samples/GSE223020/GSM6938333,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6938334,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,347,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,9 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,885,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938334,,,train,sda-all,samples/GSE223020/GSM6938334,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6938335,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,317,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,9 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,784,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938335,,,train,sda-all,samples/GSE223020/GSM6938335,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM6938336,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,346,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,9 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,2400,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938336,,,train,sda-all,samples/GSE223020/GSM6938336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6938337,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,346,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,9 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,1045,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938337,,,train,sda-all,samples/GSE223020/GSM6938337,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6938338,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,324,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,9 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,2258,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938338,,,train,sda-all,samples/GSE223020/GSM6938338,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM6938339,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,331,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,9 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,2058,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938339,,,train,sda-all,samples/GSE223020/GSM6938339,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6938340,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,ST (legacy),ST (legacy),False,,1643,Three-dimensional molecular cartography of human cerebral organoids revealed by double-barcoded spatial transcriptomics,GSE223020,GSE223020,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Cerebral organoid,,luna,,Cerebral organoid differentiation,rule: culture or organoid (culture time is not a life stage),not stated,9 months,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,17808,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,37751695,,GSM6938340,,,train,sda-all,samples/GSE223020/GSM6938340,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM6939154,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2547,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,GSE223066,GSE223066,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,spatial object recognition training,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.073457798139227,platform_constant,4.073457798139227,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939154,,,train,hesrt,samples/GSE223066/GSM6939154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6939155,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2906,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,GSE223066,GSE223066,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,spatial object recognition training,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.044978598427247,platform_constant,4.044978598427247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939155,,,train,hesrt,samples/GSE223066/GSM6939155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6939156,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2176,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,GSE223066,GSE223066,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,spatial object recognition training,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.04428407312448,platform_constant,4.04428407312448,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939156,,,train,hesrt,samples/GSE223066/GSM6939156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6939157,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2349,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,GSE223066,GSE223066,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,spatial object recognition training,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.061162751751127,platform_constant,4.061162751751127,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939157,,,train,hesrt,samples/GSE223066/GSM6939157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6939158,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2744,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,GSE223066,GSE223066,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,home cage,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.0543355901559135,platform_constant,4.0543355901559135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939158,,,train,hesrt,samples/GSE223066/GSM6939158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6939159,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2593,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,GSE223066,GSE223066,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,home cage,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.061162751751108,platform_constant,4.061162751751108,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939159,,,train,hesrt,samples/GSE223066/GSM6939159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6939160,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3065,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,GSE223066,GSE223066,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,home cage,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.061860370596781,platform_constant,4.061860370596781,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939160,,,train,hesrt,samples/GSE223066/GSM6939160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6939161,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2880,Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation,GSE223066,GSE223066,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,home cage,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.062790665375223,platform_constant,4.062790665375223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37773230,,GSM6939161,,,train,hesrt,samples/GSE223066/GSM6939161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM6957676,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,52434,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:PA019,PA019,,,release v3,sequencing-based,slideseq,,,bead,30286,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957676,,,train,sda-all,samples/GSE223501/GSM6957676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6957677,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,50129,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:PA025,PA025,,,release v3,sequencing-based,slideseq,,,bead,27101,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957677,,,train,sda-all,samples/GSE223501/GSM6957677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6957678,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,57687,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:PA054,PA054,,,release v3,sequencing-based,slideseq,,,bead,29682,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957678,,,train,sda-all,samples/GSE223501/GSM6957678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6957680,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,54416,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:N254,N254,,,release v3,sequencing-based,slideseq,,,bead,28945,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957680,,,train,sda-all,samples/GSE223501/GSM6957680,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6957681,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,44415,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:N586,N586,,,release v3,sequencing-based,slideseq,,,bead,28424,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957681,,,train,sda-all,samples/GSE223501/GSM6957681,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6957682,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,59561,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:STK_14,STK_14,,,release v3,sequencing-based,slideseq,,,bead,28210,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957682,,,train,sda-all,samples/GSE223501/GSM6957682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6957683,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,59786,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:STK_18,STK_18,,,release v3,sequencing-based,slideseq,,,bead,30509,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957683,,,train,sda-all,samples/GSE223501/GSM6957683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6957684,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,55673,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:STK_15,STK_15,,,release v3,sequencing-based,slideseq,,,bead,29801,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957684,,,train,sda-all,samples/GSE223501/GSM6957684,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6957685,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,54002,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:STK_20,STK_20,,,release v3,sequencing-based,slideseq,,,bead,28764,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957685,,,train,sda-all,samples/GSE223501/GSM6957685,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6957686,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,55821,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:STK22dot2,STK22dot2,,,release v3,sequencing-based,slideseq,,,bead,28689,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957686,,,train,sda-all,samples/GSE223501/GSM6957686,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6957687,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,42319,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:KRAS_10,KRAS_10,,,release v3,sequencing-based,slideseq,,,bead,28607,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957687,,,train,sda-all,samples/GSE223501/GSM6957687,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM6957689,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,49445,Non-small Cell Lung Cancer Brain Metastasis Atlas [slide-seq],GSE223501,GSE223501+GSE223503,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,,MONDO:0005233,luna,,,luna,not stated,,not stated,,GSE223501:KRAS_12,KRAS_12,,,release v3,sequencing-based,slideseq,,,bead,28512,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,40016452,,GSM6957689,,,train,sda-all,samples/GSE223501/GSM6957689,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6963115,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2650,Multimodal decoding of human liver regeneration [st_human],GSE223559,GSE223559,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,APAP liver explant,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.8849557522123894,platform_constant,0.8849557522123894,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963115,,,train,hesrt,samples/GSE223559/GSM6963115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM6963116,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2910,Multimodal decoding of human liver regeneration [st_human],GSE223559,GSE223559,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,APAP liver explant,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963116,,,train,hesrt,samples/GSE223559/GSM6963116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM6963117,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1776,Multimodal decoding of human liver regeneration [st_human],GSE223559,GSE223559,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,APAP liver explant,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963117,,,train,hesrt,samples/GSE223559/GSM6963117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6963119,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1969,Multimodal decoding of human liver regeneration [st_human],GSE223559,GSE223559,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Healthy liver explant,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.9090909090909091,platform_constant,0.9090909090909091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963119,,,train,hesrt,samples/GSE223559/GSM6963119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6963120,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4350,Multimodal decoding of human liver regeneration [st_human],GSE223559,GSE223559,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Healthy liver explant,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.8771592358278378,platform_constant,0.8771592358278378,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963120,,,train,hesrt,samples/GSE223559/GSM6963120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6963121,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2618,Multimodal decoding of human liver regeneration [st_human],GSE223559,GSE223559,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Healthy liver explant,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.8771592358278378,platform_constant,0.8771592358278378,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963121,,,train,hesrt,samples/GSE223559/GSM6963121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM6963122,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2462,Multimodal decoding of human liver regeneration [st_human],GSE223559,GSE223559,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,NonAE liver explant,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963122,,,train,hesrt,samples/GSE223559/GSM6963122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6963123,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3645,Multimodal decoding of human liver regeneration [st_human],GSE223559,GSE223559,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,NonAE liver explant,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963123,,,train,hesrt,samples/GSE223559/GSM6963123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6963514,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1951,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,Uninjured,0h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8849211017394925,platform_constant,0.8849211017394925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963514,,,test,hesrt,samples/GSE223560/GSM6963514,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6963515,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2730,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,Uninjured,0h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8849211017394925,platform_constant,0.8849211017394925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963515,,,test,hesrt,samples/GSE223560/GSM6963515,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM6963517,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2432,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,Uninjured,0h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.9266809891468585,platform_constant,0.9266809891468585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963517,,,test,hesrt,samples/GSE223560/GSM6963517,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM6963518,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2521,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005154,mondo_predicate (Luna: perturbation),POD,24h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8622612271184538,platform_constant,0.8622612271184538,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963518,,,test,hesrt,samples/GSE223560/GSM6963518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6963519,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1649,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005154,mondo_predicate (Luna: perturbation),POD,24h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.847457627118644,platform_constant,0.847457627118644,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963519,,,test,hesrt,samples/GSE223560/GSM6963519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6963520,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1971,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005154,mondo_predicate (Luna: perturbation),POD,36h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8333043996551018,platform_constant,0.8333043996551018,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963520,,,test,hesrt,samples/GSE223560/GSM6963520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6963521,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2036,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005154,mondo_predicate (Luna: perturbation),POD,36h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8333043996551018,platform_constant,0.8333043996551018,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963521,,,test,hesrt,samples/GSE223560/GSM6963521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6963523,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3478,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005154,mondo_predicate (Luna: perturbation),POD,48h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8558269432718281,platform_constant,0.8558269432718281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963523,,,test,hesrt,samples/GSE223560/GSM6963523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6963524,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1491,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005154,mondo_predicate (Luna: perturbation),POD,48h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8558269432718281,platform_constant,0.8558269432718281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963524,,,test,hesrt,samples/GSE223560/GSM6963524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM6963525,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2632,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005154,mondo_predicate (Luna: perturbation),POD,48h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.869532343443978,platform_constant,0.869532343443978,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963525,,,test,hesrt,samples/GSE223560/GSM6963525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM6963526,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2432,Multimodal decoding of human liver regeneration [st_mouse],GSE223560,GSE223560,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005154,mondo_predicate (Luna: perturbation),POD,48h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.8771592358278378,platform_constant,0.8771592358278378,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38693268,10.1038/s41586-024-07376-2,GSM6963526,,,test,hesrt,samples/GSE223560/GSM6963526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM6996258,skeletal muscle,perturbation,,tibialis anterior,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),770,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,GSE223813,GSE223813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001385,Tibialis Anterior (TA),,luna,,CTX muscle injury,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.083738577202159,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,other,one tissue region has no spots; spots that exist are aligned,39190487,,GSM6996258,,,train,sda-all,samples/GSE223813/GSM6996258,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM6996259,skeletal muscle,perturbation,,tibialis anterior,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1273,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,GSE223813,GSE223813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001385,Tibialis Anterior (TA),,luna,,CTX muscle injury,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9754316952245508,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39190487,,GSM6996259,,,train,sda-all,samples/GSE223813/GSM6996259,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6996260,skeletal muscle,perturbation,,tibialis anterior,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1567,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,GSE223813,GSE223813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001385,Tibialis Anterior (TA),,luna,,CTX muscle injury,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.98248728954654,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39190487,,GSM6996260,,,train,sda-all,samples/GSE223813/GSM6996260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM6996261,skeletal muscle,disease,Duchenne muscular dystrophy,gastrocnemius,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),856,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,GSE223813,GSE223813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius muscle (GAST),MONDO:0010679,luna,,vehicle,age rule: age with unit,juvenile,2 month old,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.634693311657189,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),,39190487,,GSM6996261,,,train,sda-all,samples/GSE223813/GSM6996261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM6996262,skeletal muscle,disease,Duchenne muscular dystrophy,gastrocnemius,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),653,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,GSE223813,GSE223813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius muscle (GAST),MONDO:0010679,luna,,vehicle,age rule: age with unit,juvenile,2 month old,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.524590407932672,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,stain too faint / in_tissue drawn by hand,"poor, dark staining; registration is correct",39190487,,GSM6996262,,,train,sda-all,samples/GSE223813/GSM6996262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM6996263,skeletal muscle,disease,Duchenne muscular dystrophy,gastrocnemius,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1589,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,GSE223813,GSE223813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius muscle (GAST),MONDO:0010679,luna,,prednisone,age rule: age with unit,juvenile,2 month old,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9700956430369816,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39190487,,GSM6996263,,,train,sda-all,samples/GSE223813/GSM6996263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM6996264,skeletal muscle,disease,Duchenne muscular dystrophy,gastrocnemius,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),814,Spatiotemporal transcriptomic mapping of regenerative inflammation in skeletal muscle reveals a dynamic multilayered tissue architecture,GSE223813,GSE223813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius muscle (GAST),MONDO:0010679,luna,,prednisone,age rule: age with unit,juvenile,2 month old,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9900038725014104,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39190487,,GSM6996264,,,train,sda-all,samples/GSE223813/GSM6996264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM7017457,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2630,Single cell and spatial transcriptomic profile of whole CLAD and donor control lung tissue,GSE224210,GSE224210,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,chronic lung allograft dysfunction,CLAD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7352742413412813,platform_constant,0.7352742413412813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36946463,,GSM7017457,,,train,hesrt,samples/GSE224210/GSM7017457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7017458,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2395,Single cell and spatial transcriptomic profile of whole CLAD and donor control lung tissue,GSE224210,GSE224210,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,chronic lung allograft dysfunction,CLAD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7352742413412813,platform_constant,0.7352742413412813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36946463,,GSM7017458,,,train,hesrt,samples/GSE224210/GSM7017458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7017459,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2524,Single cell and spatial transcriptomic profile of whole CLAD and donor control lung tissue,GSE224210,GSE224210,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,chronic lung allograft dysfunction,CLAD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7352742413412813,platform_constant,0.7352742413412813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36946463,,GSM7017459,,,train,hesrt,samples/GSE224210/GSM7017459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7017460,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1008,Single cell and spatial transcriptomic profile of whole CLAD and donor control lung tissue,GSE224210,GSE224210,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7352742413412813,platform_constant,0.7352742413412813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36946463,,GSM7017460,,,train,hesrt,samples/GSE224210/GSM7017460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7019835,ovary,disease,carcinoma,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1514,Targeting PDGF signaling of cancer-associated fibroblasts blocks feedback activation of HIF-1α and overcomes chemoresistance in ovarian clear cell carcinoma,GSE224336,GSE224336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,OCCC tumor,MONDO:0004993,luna,ovarian clear cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.365521763857298,platform_constant,4.365521763857298,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670097,,GSM7019835,,,train,hesrt,samples/GSE224336/GSM7019835,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7019836,ovary,disease,carcinoma,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,898,Targeting PDGF signaling of cancer-associated fibroblasts blocks feedback activation of HIF-1α and overcomes chemoresistance in ovarian clear cell carcinoma,GSE224336,GSE224336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,OCCC tumor,MONDO:0004993,luna,ovarian clear cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.36437660500443,platform_constant,4.36437660500443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670097,,GSM7019836,,,train,hesrt,samples/GSE224336/GSM7019836,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7020543,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2540,PREGNANCY-RESPONSIVE POOLS OF ADULT NEURAL STEM CELLS FOR TRANSIENT NEUROGENESIS IN MOTHERS,GSE224360,GSE224360,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Virgin,age rule: age with unit,adult,4 months,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.837231009198858,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37995223,,GSM7020543,,,train,sda-all,samples/GSE224360/GSM7020543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7020544,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2123,PREGNANCY-RESPONSIVE POOLS OF ADULT NEURAL STEM CELLS FOR TRANSIENT NEUROGENESIS IN MOTHERS,GSE224360,GSE224360,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Perinatal care,age rule: age with unit,adult,4 months,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.838381486871975,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37995223,,GSM7020544,,,train,sda-all,samples/GSE224360/GSM7020544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7020545,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2369,PREGNANCY-RESPONSIVE POOLS OF ADULT NEURAL STEM CELLS FOR TRANSIENT NEUROGENESIS IN MOTHERS,GSE224360,GSE224360,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Virgin,age rule: age with unit,adult,4 months,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.838073450070576,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37995223,,GSM7020545,,,train,sda-all,samples/GSE224360/GSM7020545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7020546,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2648,PREGNANCY-RESPONSIVE POOLS OF ADULT NEURAL STEM CELLS FOR TRANSIENT NEUROGENESIS IN MOTHERS,GSE224360,GSE224360,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Peri-weaning,age rule: age with unit,adult,4 months,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.846463807285455,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,37995223,,GSM7020546,,,train,sda-all,samples/GSE224360/GSM7020546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7021870,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3006,Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces,GSE224411,GSE224411,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,HCC,MONDO:0007256,luna,hepatocellular carcinoma,cabozantinib+nivolumab,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37080163;37591207,,CG-3a37787710c1,cross_gse_redeposit,GSM7661255,test,hesrt,samples/GSE224411/GSM7021870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7021871,pancreas,disease,neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1872,Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces,GSE224411,GSE224411,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PanIN,MONDO:0005070,luna,pancreatic intraepithelial neoplasia,naïve,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,0.9109750373485539,platform_constant,0.9109750373485539,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37080163;37591207,,CG-4cfe023cac15,cross_gse_redeposit,GSM8058247,test,hesrt,samples/GSE224411/GSM7021871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7021872,lymph node,disease,pancreatic ductal adenocarcinoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1351,Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces,GSE224411,GSE224411,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,PDAClymphnode,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,GVAX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.0,platform_constant,2.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37080163;37591207,,CG-668d5271dc68,cross_gse_redeposit,GSM8514556,test,hesrt,samples/GSE224411/GSM7021872,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8, ""disease_status"": 0.96, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7024964,brain,disease,brain neoplasm,brain,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,848,ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution (spatial transcriptomics subset),GSE224477,GSE224477+GSE224478,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211,luna,ETMR,,age rule: bare number read as years,adult,28,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.087409558325102,platform_constant,4.087409558325102,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40562749,,GSM7024964,,,test,hesrt,samples/GSE224477/GSM7024964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7024965,brain,disease,brain neoplasm,brain,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,3814,ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution (spatial transcriptomics subset),GSE224477,GSE224477+GSE224478,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211,luna,ETMR,,age rule: bare number read as years,adult,48,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.079077077888968,platform_constant,4.079077077888968,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40562749,,GSM7024965,,,test,hesrt,samples/GSE224477/GSM7024965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7024966,brain,disease,brain neoplasm,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,2668,ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution (spatial transcriptomics subset),GSE224477,GSE224477+GSE224478,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211,luna,ETMR,,age rule: bare number read as years,juvenile,12,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.061430328139184,platform_constant,4.061430328139184,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40562749,,GSM7024966,,,test,hesrt,samples/GSE224477/GSM7024966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7049132,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1340,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,GSE225475,GSE225475,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,healthy,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.9260237809235035,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049132,,,val,sda-all,samples/GSE225475/GSM7049132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7049133,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,904,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,GSE225475,GSE225475,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,healthy,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.9623764012166793,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049133,,,val,sda-all,samples/GSE225475/GSM7049133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7049134,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1352,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,GSE225475,GSE225475,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005083,luna,psoriasis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.91581316467385,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049134,,,val,sda-all,samples/GSE225475/GSM7049134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7049135,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1393,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,GSE225475,GSE225475,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005083,luna,psoriasis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.838102889283527,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049135,,,val,sda-all,samples/GSE225475/GSM7049135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM7049136,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1463,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,GSE225475,GSE225475,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005083,luna,psoriasis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.749533780829714,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049136,,,val,sda-all,samples/GSE225475/GSM7049136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM7049137,skin,disease,psoriasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1118,Single Cell and Spatial Sequencing Define Processes by which Keratinocytes and Fibroblasts Amplify Inflammatory Responses in Psoriasis,GSE225475,GSE225475,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005083,luna,psoriasis,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.066888529168035,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37308489,,GSM7049137,,,val,sda-all,samples/GSE225475/GSM7049137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7054270,unknown,disease,endometrial cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,539,Netrin-1 blockade induces tumor growth inhibition and EMT reversion in endometrial cancer [visium data],GSE225690,GSE225690+GSE225691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,metastasis biopsies,MONDO:0011962,luna,endometrial carcinoma,At inclusion,luna,not stated,,not stated,,GSE225690:01-034,01-034,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.367105132057389,platform_constant,4.367105132057389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532934,,GSM7054270,,,train,hesrt,samples/GSE225690/GSM7054270,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7054271,unknown,disease,endometrial cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,755,Netrin-1 blockade induces tumor growth inhibition and EMT reversion in endometrial cancer [visium data],GSE225690,GSE225690+GSE225691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,metastasis biopsies,MONDO:0011962,luna,endometrial carcinoma,After one month of treatment,luna,not stated,,not stated,,GSE225690:01-034,01-034,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9723685223480274,platform_constant,3.9723685223480274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532934,,GSM7054271,,,train,hesrt,samples/GSE225690/GSM7054271,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7054272,unknown,disease,endometrial cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1091,Netrin-1 blockade induces tumor growth inhibition and EMT reversion in endometrial cancer [visium data],GSE225690,GSE225690+GSE225691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,metastasis biopsies,MONDO:0011962,luna,endometrial carcinoma,At inclusion,luna,not stated,,not stated,,GSE225690:01-039,01-039,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.968420893894744,platform_constant,3.968420893894744,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532934,,GSM7054272,,,train,hesrt,samples/GSE225690/GSM7054272,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7054273,unknown,disease,endometrial cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2141,Netrin-1 blockade induces tumor growth inhibition and EMT reversion in endometrial cancer [visium data],GSE225690,GSE225690+GSE225691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,metastasis biopsies,MONDO:0011962,luna,endometrial carcinoma,After one month of treatment,luna,not stated,,not stated,,GSE225690:01-039,01-039,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.957894838164209,platform_constant,3.957894838164209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532934,,GSM7054273,,,train,hesrt,samples/GSE225690/GSM7054273,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7055901,skeletal muscle,normal,,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1493,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,,luna,,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.259523561513061,platform_constant,4.259523561513061,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055901,,,test,hesrt,samples/GSE225766/GSM7055901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055902,skeletal muscle,normal,,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1438,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,,luna,,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.258163241396546,platform_constant,4.258163241396546,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055902,,,test,hesrt,samples/GSE225766/GSM7055902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055903,skeletal muscle,disease,Duchenne muscular dystrophy,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1064,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,MONDO:0010679,luna,,MDX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.2578228973706835,platform_constant,4.2578228973706835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055903,,,test,hesrt,samples/GSE225766/GSM7055903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055904,skeletal muscle,disease,Duchenne muscular dystrophy,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,959,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,MONDO:0010679,luna,,MDX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.254421648817894,platform_constant,4.254421648817894,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055904,,,test,hesrt,samples/GSE225766/GSM7055904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055905,skeletal muscle,normal,,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1497,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,,luna,,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.277171377374568,platform_constant,4.277171377374568,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055905,,,test,hesrt,samples/GSE225766/GSM7055905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055906,skeletal muscle,disease,Duchenne muscular dystrophy,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,826,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,MONDO:0010679,luna,,MDX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.258421739868129,platform_constant,4.258421739868129,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055906,,,test,hesrt,samples/GSE225766/GSM7055906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055907,skeletal muscle,disease,Duchenne muscular dystrophy,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1155,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,MONDO:0010679,luna,,MDX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.260448811738785,platform_constant,4.260448811738785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055907,,,test,hesrt,samples/GSE225766/GSM7055907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7055908,skeletal muscle,disease,Duchenne muscular dystrophy,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1136,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,MONDO:0010679,luna,,MDX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.2582524480561075,platform_constant,4.2582524480561075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7055908,,,test,hesrt,samples/GSE225766/GSM7055908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7230943,skeletal muscle,perturbation,,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2516,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,,luna,,cardiotoxin,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,37410813,,GSM7230943,,,test,sda-all,samples/GSE225766/GSM7230943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7230944,skeletal muscle,perturbation,,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1854,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,,luna,,WT Day3 PostInjury cardiotoxin,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.171629121686752,platform_constant,4.171629121686752,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7230944,,,test,hesrt,samples/GSE225766/GSM7230944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7230945,skeletal muscle,perturbation,,gastrocnemius,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2285,A cellular and molecular spatial atlas of dystrophic muscle,GSE225766,GSE225766,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001388,Gastrocnemius,,luna,,WT Day5 PostInjury cardiotoxin,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.164466619102457,platform_constant,4.164466619102457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37410813,,GSM7230945,,,test,hesrt,samples/GSE225766/GSM7230945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7058756,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2054,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,GSE225857,GSE225857,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colorectal tissue,MONDO:0005575,luna,colorectal cancer,primary tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.87828282087531,platform_constant,3.87828282087531,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058756,,,train,hesrt,samples/GSE225857/GSM7058756,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7058757,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3305,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,GSE225857,GSE225857,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colorectal tissue,MONDO:0005575,luna,colorectal cancer,primary tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.8917839483804144,platform_constant,3.8917839483804144,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058757,,,train,hesrt,samples/GSE225857/GSM7058757,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7058758,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3417,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,GSE225857,GSE225857,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colorectal tissue,MONDO:0005575,luna,colorectal cancer,primary tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.868939749552994,platform_constant,3.868939749552994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058758,,,train,hesrt,samples/GSE225857/GSM7058758,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM7058759,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4016,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,GSE225857,GSE225857,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colorectal tissue,MONDO:0005575,luna,colorectal cancer,primary tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.919142220869314,platform_constant,3.919142220869314,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058759,,,train,hesrt,samples/GSE225857/GSM7058759,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7058760,liver,disease,colorectal cancer;metastatic neoplasm,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4672,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,GSE225857,GSE225857,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver tissue,MONDO:0005575;MONDO:0024883,luna,colorectal cancer,liver metastatic tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.911818904165685,platform_constant,3.911818904165685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058760,,,train,hesrt,samples/GSE225857/GSM7058760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7058761,liver,disease,colorectal cancer;metastatic neoplasm,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4796,Single-cell and spatial transcriptome analysis reveals the cellular heterogeneity of liver metastatic colorectal cancer,GSE225857,GSE225857,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver tissue,MONDO:0005575;MONDO:0024883,luna,colorectal cancer,liver metastatic tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9610606329024867,platform_constant,3.9610606329024867,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37327339,10.1126/sciadv.adf5464,GSM7058761,,,train,hesrt,samples/GSE225857/GSM7058761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM7063747,plant,normal,,,primary tissue,Arabidopsis thaliana,thale cress,not stated,unknown,Slide-seq,Slide-seq,False,,55290,A Single-Nucleus Atlas of Seed-to-Seed Development in Arabidopsis,GSE226097,GSE226097,3702,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,luna,,Germinating seeds,,luna,,,luna,not stated,1.25-days-old,not stated,,,,,,release v3,sequencing-based,slide-seq,,,bead,19502,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40830271,,GSM7063747,,,test,sda-all,samples/GSE226097/GSM7063747,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.21}",life_stage,low_confidence_annotation
GSM7068162,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,grayscale bright-field (heuristic),1991,"Shared inflammatory glial cell signature after brain injury, revealed by spatial, temporal and cell-type-specific profiling of the murine cerebral cortex [spatial transcriptomics]",GSE226208,GSE226208+GSE226211,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,w/o treatment,age rule: age with unit,adult,8-12 weeks old,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,27998,counts,um,1.0,verified,3.950544419410055,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,38570482;39179527,,GSM7068162,,,train,sda-all,samples/GSE226208/GSM7068162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7068163,brain,disease,nervous system injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,grayscale bright-field (heuristic),1740,"Shared inflammatory glial cell signature after brain injury, revealed by spatial, temporal and cell-type-specific profiling of the murine cerebral cortex [spatial transcriptomics]",GSE226208,GSE226208+GSE226211,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0044745,mondo_predicate (Luna: perturbation),,2days DMSO,age rule: age with unit,adult,8-12 weeks old,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,27998,counts,um,1.0,verified,3.9543550332093544,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,38570482;39179527,,GSM7068163,,,train,sda-all,samples/GSE226208/GSM7068163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7979963,uterus,normal,,endometrium,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,20472,Spatiotemporal understanding of healthy and disordered early pregnancy governed by immune-featured stromal cells,GSE226430,GSE226430,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001295,Endometrium,,luna,,,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,23427,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37699390,,GSM7979963,,,train,sda-all,samples/GSE226430/GSM7979963,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7979964,uterus,normal,,endometrium,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,22355,Spatiotemporal understanding of healthy and disordered early pregnancy governed by immune-featured stromal cells,GSE226430,GSE226430,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001295,Endometrium,,luna,,,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,23330,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37699390,,GSM7979964,,,train,sda-all,samples/GSE226430/GSM7979964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7979965,uterus,normal,,endometrium,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,26212,Spatiotemporal understanding of healthy and disordered early pregnancy governed by immune-featured stromal cells,GSE226430,GSE226430,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001295,Endometrium,,luna,,,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,23373,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37699390,,GSM7979965,,,train,sda-all,samples/GSE226430/GSM7979965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7078497,kidney,disease,acute kidney injury,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,4237,Human and Murine Kidneys Contain Transcriptionally and Spatially Orthologous Resident Macrophage Subpopulations in Acute Kidney Injury,GSE226533,GSE226533,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002492,luna,Acute Kidney Injury,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.385366059770765,platform_constant,4.385366059770765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7078497,,,train,hesrt,samples/GSE226533/GSM7078497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7078498,kidney,disease,acute kidney injury,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,4059,Human and Murine Kidneys Contain Transcriptionally and Spatially Orthologous Resident Macrophage Subpopulations in Acute Kidney Injury,GSE226533,GSE226533,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002492,luna,Acute Kidney Injury,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.357420540094862,platform_constant,4.357420540094862,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7078498,,,train,hesrt,samples/GSE226533/GSM7078498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7081216,brain,normal,,middle temporal gyrus,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3529,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",GSE226663,GSE226663,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,middle temporal gyrus,,luna,Control,Control,age rule: age in years,aged,75 years,extracted field,female,GSE226663:144105,144105,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.784962347064312,platform_constant,4.784962347064312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081216,,,train,hesrt,samples/GSE226663/GSM7081216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7081217,brain,normal,,middle temporal gyrus,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2673,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",GSE226663,GSE226663,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,middle temporal gyrus,,luna,Control,Control,age rule: age in years,aged,75 years,extracted field,female,GSE226663:144106,144106,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.339473492904843,platform_constant,4.339473492904843,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081217,,,train,hesrt,samples/GSE226663/GSM7081217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7081218,brain,normal,,middle temporal gyrus,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3277,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",GSE226663,GSE226663,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,middle temporal gyrus,,luna,Control,Control,age rule: age in years,aged,82 years,extracted field,male,GSE226663:144107,144107,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.802276458685329,platform_constant,4.802276458685329,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081218,,,train,hesrt,samples/GSE226663/GSM7081218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7081219,brain,normal,,middle temporal gyrus,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3158,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",GSE226663,GSE226663,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,middle temporal gyrus,,luna,Control,Control,age rule: age in years,aged,82 years,extracted field,male,GSE226663:144108,144108,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.8011453208731245,platform_constant,4.8011453208731245,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081219,,,train,hesrt,samples/GSE226663/GSM7081219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7081220,brain,disease,Alzheimer disease,middle temporal gyrus,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3083,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",GSE226663,GSE226663,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,middle temporal gyrus,MONDO:0004975,luna,Alzheimer's Disease (AD),Alzheimer's Disease (AD),age rule: age in years,aged,83 years,extracted field,male,GSE226663:144111,144111,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.830445125300169,platform_constant,4.830445125300169,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081220,,,train,hesrt,samples/GSE226663/GSM7081220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7081221,brain,disease,Alzheimer disease,middle temporal gyrus,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2850,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",GSE226663,GSE226663,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,middle temporal gyrus,MONDO:0004975,luna,Alzheimer's Disease (AD),Alzheimer's Disease (AD),age rule: age in years,aged,83 years,extracted field,male,GSE226663:144112,144112,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.830445125300168,platform_constant,4.830445125300168,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081221,,,train,hesrt,samples/GSE226663/GSM7081221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7081222,brain,disease,Parkinson disease,middle temporal gyrus,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2959,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",GSE226663,GSE226663,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,middle temporal gyrus,MONDO:0005180,luna,Parkinson's Disease (PD),Parkinson's Disease (PD),age rule: age in years,aged,71 years,extracted field,female,GSE226663:144113,144113,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.830445125300169,platform_constant,4.830445125300169,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081222,,,train,hesrt,samples/GSE226663/GSM7081222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7081223,brain,disease,Parkinson disease,middle temporal gyrus,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2729,"Common Mitochondrial Deletions in RNA-Seq: Evaluation of Bulk, Single-Cell and Spatial Transcriptomic Datasets",GSE226663,GSE226663,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,middle temporal gyrus,MONDO:0005180,luna,Parkinson's Disease (PD),Parkinson's Disease (PD),age rule: age in years,aged,71 years,extracted field,female,GSE226663:144114,144114,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.831583859652133,platform_constant,4.831583859652133,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38368460,,GSM7081223,,,train,hesrt,samples/GSE226663/GSM7081223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7267862,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,395,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],GSE226760,GSE226760,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,PBS,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.276037737834728,platform_constant,4.276037737834728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267862,,,train,hesrt,samples/GSE226760/GSM7267862,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.54, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7267863,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,598,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],GSE226760,GSE226760,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,PBS,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.047007160519825,platform_constant,4.047007160519825,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267863,,,train,hesrt,samples/GSE226760/GSM7267863,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 0.72, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7267864,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,354,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],GSE226760,GSE226760,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,PBS,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.276160043713187,platform_constant,4.276160043713187,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267864,,,train,hesrt,samples/GSE226760/GSM7267864,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.73, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7267865,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,406,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],GSE226760,GSE226760,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,PBS,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.276037737834718,platform_constant,4.276037737834718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267865,,,train,hesrt,samples/GSE226760/GSM7267865,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.28, ""uberon"": 0.53, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7267866,skin,disease,systemic sclerosis,zone of skin,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,663,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],GSE226760,GSE226760,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0005100,luna,,Bleomycin,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.276037737834728,platform_constant,4.276037737834728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267866,,,train,hesrt,samples/GSE226760/GSM7267866,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.64, ""life_stage"": 0.99}",,
GSM7267867,skin,disease,systemic sclerosis,zone of skin,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,552,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],GSE226760,GSE226760,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0005100,luna,,Bleomycin,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.276037737834718,platform_constant,4.276037737834718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267867,,,train,hesrt,samples/GSE226760/GSM7267867,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.58, ""life_stage"": 0.99}",disease_status;uberon,low_confidence_annotation
GSM7267869,skin,disease,skin disorder;scleroderma,zone of skin,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,526,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],GSE226760,GSE226760,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0005093;MONDO:0019340,mondo_predicate (Luna: perturbation),,Celastrol,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.276160043713187,platform_constant,4.276160043713187,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267869,,,train,hesrt,samples/GSE226760/GSM7267869,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.56, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7267870,skin,disease,systemic sclerosis,zone of skin,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,624,The Triptryium wilfordii derivative celastrol has anti-fibrotic effects in systemic sclerosis [Spatial Transcriptomics],GSE226760,GSE226760,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0005100,mondo_predicate (Luna: perturbation),,Celastrol,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.276037737834728,platform_constant,4.276037737834728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37328193,,GSM7267870,,,train,hesrt,samples/GSE226760/GSM7267870,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.42, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7089855,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,4148,Visium Spatial transcriptomics analysis of human primary colorectal cancer,GSE226997,GSE226997,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Human colorectal cancer,MONDO:0005575,luna,Primary colorectal cancer,Primary colorectal cancer,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17944,counts,pixel,4.026068950839756,platform_constant,4.026068950839756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38446659,,GSM7089855,,,train,hesrt,samples/GSE226997/GSM7089855,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM7089856,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,3737,Visium Spatial transcriptomics analysis of human primary colorectal cancer,GSE226997,GSE226997,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Human colorectal cancer,MONDO:0005575,luna,Primary colorectal cancer,Primary colorectal cancer,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17944,counts,pixel,4.071724246666997,platform_constant,4.071724246666997,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38446659,,GSM7089856,,,train,hesrt,samples/GSE226997/GSM7089856,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7089857,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,4676,Visium Spatial transcriptomics analysis of human primary colorectal cancer,GSE226997,GSE226997,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Human colorectal cancer,MONDO:0005575,luna,Primary colorectal cancer,Primary colorectal cancer,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19144,counts,pixel,4.0490276487619745,platform_constant,4.0490276487619745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38446659,,GSM7089857,,,train,hesrt,samples/GSE226997/GSM7089857,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7089858,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,3535,Visium Spatial transcriptomics analysis of human primary colorectal cancer,GSE226997,GSE226997,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Human colorectal cancer,MONDO:0005575,luna,Primary colorectal cancer,Primary colorectal cancer,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17944,counts,pixel,4.016002226104998,platform_constant,4.016002226104998,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38446659,,GSM7089858,,,train,hesrt,samples/GSE226997/GSM7089858,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM7090083,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2770,Comparison of the Illumina NextSeq 2000 and GeneMind Genolab M sequencing platforms for spatial transcriptomics,GSE227019,GSE227019,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian cancer,MONDO:0008170,luna,Ovarian cancer,,luna,not stated,,not stated,,GSE227019:1,1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.1388924126463404,platform_constant,4.1388924126463404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36882687,,SS-GSM7090083,same_section_within_series,GSM7090086,test,hesrt,samples/GSE227019/GSM7090083,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7090084,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2558,Comparison of the Illumina NextSeq 2000 and GeneMind Genolab M sequencing platforms for spatial transcriptomics,GSE227019,GSE227019,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian cancer,MONDO:0008170,luna,Ovarian cancer,,luna,not stated,,not stated,,GSE227019:2,2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.004723189697145,platform_constant,4.004723189697145,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36882687,,SS-GSM7090084,same_section_within_series,GSM7090087,test,hesrt,samples/GSE227019/GSM7090084,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM7090085,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1979,Comparison of the Illumina NextSeq 2000 and GeneMind Genolab M sequencing platforms for spatial transcriptomics,GSE227019,GSE227019,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovarian cancer,MONDO:0008170,luna,Ovarian cancer,,luna,not stated,,not stated,,GSE227019:3,3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9759794277506737,platform_constant,3.9759794277506737,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36882687,,SS-GSM7090085,same_section_within_series,GSM7090088,test,hesrt,samples/GSE227019/GSM7090085,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM7090410,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Other,ISS (Cartana),False,,85445,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,GSE227046,GSE227046,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,C57BL/6,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,ISS by Cartana,,,cell,193,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090410,,,train,sda-all,samples/GSE227046/GSM7090410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7090411,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Other,ISS (Cartana),False,,121326,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,GSE227046,GSE227046,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,C57BL/6,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,ISS by Cartana,,,cell,196,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090411,,,train,sda-all,samples/GSE227046/GSM7090411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7090412,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Other,ISS (Cartana),False,,99515,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,GSE227046,GSE227046,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,C57BL/6,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,ISS by Cartana,,,cell,194,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090412,,,train,sda-all,samples/GSE227046/GSM7090412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7090413,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Other,ISS (Cartana),False,,106695,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,GSE227046,GSE227046,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,C57BL/6,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,ISS by Cartana,,,cell,195,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090413,,,train,sda-all,samples/GSE227046/GSM7090413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7090414,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Other,ISS (Cartana),False,,127634,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,GSE227046,GSE227046,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,C57BL/6,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,ISS by Cartana,,,cell,195,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090414,,,train,sda-all,samples/GSE227046/GSM7090414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7090415,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,female,Other,ISS (Cartana),False,,94869,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,GSE227046,GSE227046,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,C57BL/6,luna,not stated,,extracted field,female,,,,,release v3,imaging-based,ISS by Cartana,,,cell,194,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,38360882,,GSM7090415,,,train,sda-all,samples/GSE227046/GSM7090415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7090416,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1815,High resolution spatially resolved transcriptomic atlas of kidney injury and repair by RNA hybridization-based in situ sequencing,GSE227046,GSE227046,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,sham,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.891970527368205,platform_constant,3.891970527368205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38360882,,GSM7090416,,,train,hesrt,samples/GSE227046/GSM7090416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7097913,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2830,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],GSE227332,GSE227332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,C57BL/6,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.576050413152669,platform_constant,5.576050413152669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097913,,,test,hesrt,samples/GSE227332/GSM7097913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7097914,thymus,perturbation,,thymus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2447,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],GSE227332,GSE227332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,Zfp148 fl/fl; Zfp281 fl/fl; Cd4-Cre+,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.473021612230517,platform_constant,6.473021612230517,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097914,,,test,hesrt,samples/GSE227332/GSM7097914,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7097915,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2692,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],GSE227332,GSE227332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,C57BL/6,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.3170475002591004,platform_constant,5.3170475002591004,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097915,,,test,hesrt,samples/GSE227332/GSM7097915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7097916,thymus,perturbation,,thymus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2452,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],GSE227332,GSE227332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,Zfp148 fl/fl; Zfp281 fl/fl; Cd4-Cre+,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.969250279271878,platform_constant,4.969250279271878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097916,,,test,hesrt,samples/GSE227332/GSM7097916,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7097917,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3189,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],GSE227332,GSE227332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,C57BL/6,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.47950289910507,platform_constant,6.47950289910507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097917,,,test,hesrt,samples/GSE227332/GSM7097917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7097918,thymus,perturbation,,thymus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2897,The transcription factor Zfp281 serves redundantly with Zfp148 to support CD4+ T cell development and functions [Thymus Visium],GSE227332,GSE227332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,Zfp148 fl/fl; Zfp281 fl/fl; Cd4-Cre+,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.135943242569339,platform_constant,6.135943242569339,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37948511,,GSM7097918,,,test,hesrt,samples/GSE227332/GSM7097918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7103780,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3052,Time-series spatial transcriptomic analysis of murine colon undergoing AOM-DSS tumorigenesis with and without LXR activation,GSE227598,GSE227598,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,"Standard Diet, Control, day 43",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.066709065350866,platform_constant,4.066709065350866,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7103780,,,train,hesrt,samples/GSE227598/GSM7103780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM7103781,colon,disease,,colon,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4585,Time-series spatial transcriptomic analysis of murine colon undergoing AOM-DSS tumorigenesis with and without LXR activation,GSE227598,GSE227598,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,"Standard Diet, AOM-DSS, day 22",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.505404567841078,platform_constant,4.505404567841078,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7103781,,,train,hesrt,samples/GSE227598/GSM7103781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7103782,colon,disease,,colon,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4344,Time-series spatial transcriptomic analysis of murine colon undergoing AOM-DSS tumorigenesis with and without LXR activation,GSE227598,GSE227598,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,"Standard Diet, AOM-DSS, day 43",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.124714419033834,platform_constant,4.124714419033834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7103782,,,train,hesrt,samples/GSE227598/GSM7103782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7103783,colon,disease,,colon,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3471,Time-series spatial transcriptomic analysis of murine colon undergoing AOM-DSS tumorigenesis with and without LXR activation,GSE227598,GSE227598,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,"GW3965 Diet, AOM-DSS, day 22",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.133000854332679,platform_constant,4.133000854332679,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7103783,,,train,hesrt,samples/GSE227598/GSM7103783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM7103784,colon,disease,,colon,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4291,Time-series spatial transcriptomic analysis of murine colon undergoing AOM-DSS tumorigenesis with and without LXR activation,GSE227598,GSE227598,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,"GW3965 Diet, AOM-DSS, day 43",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.294457666793719,platform_constant,4.294457666793719,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7103784,,,train,hesrt,samples/GSE227598/GSM7103784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM7106691,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4585,Time-series spatial transcriptomic analysis of murine small intestine (SI) undergoing irradiation induced injury-repair with and without LXR activation,GSE227742,GSE227742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,"GW3965 diet, non-irradiated (0 dpi) control",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,CG-b261b07f963b,cross_gse_redeposit,GSM8258691,train,hesrt,samples/GSE227742/GSM7106691,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7106692,small intestine,perturbation,,small intestine,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4881,Time-series spatial transcriptomic analysis of murine small intestine (SI) undergoing irradiation induced injury-repair with and without LXR activation,GSE227742,GSE227742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,"GW3965 diet, irradiated (3 dpi)",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7106692,,,train,hesrt,samples/GSE227742/GSM7106692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7106693,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4190,Time-series spatial transcriptomic analysis of murine small intestine (SI) undergoing irradiation induced injury-repair with and without LXR activation,GSE227742,GSE227742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,"Standard diet, non-irradiated (0 dpi) control",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.148965623454898,platform_constant,4.148965623454898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,CG-523382deca4d,cross_gse_redeposit,GSM8258690,train,hesrt,samples/GSE227742/GSM7106693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM7106694,small intestine,perturbation,,small intestine,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4859,Time-series spatial transcriptomic analysis of murine small intestine (SI) undergoing irradiation induced injury-repair with and without LXR activation,GSE227742,GSE227742,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,"Standard diet, irradiated (3 dpi)",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.148965623454898,platform_constant,4.148965623454898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567700,,GSM7106694,,,train,hesrt,samples/GSE227742/GSM7106694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7113328,spleen,disease,splenic marginal zone lymphoma,spleen,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,719,A spatial transcriptomics study of splenic marginal zone lymphomas (SMZL) and spleen healthy donor,GSE228056,GSE228056,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002106,spleen,MONDO:0019462,luna,SMZL,SMZL,age rule: age in years,adult,59 years,extracted field,male,GSE228056:SMZL1,SMZL1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.2632005210504476,platform_constant,4.2632005210504476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38828498;40374674,,GSM7113328,,,train,hesrt,samples/GSE228056/GSM7113328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7113329,spleen,disease,splenic marginal zone lymphoma,spleen,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1115,A spatial transcriptomics study of splenic marginal zone lymphomas (SMZL) and spleen healthy donor,GSE228056,GSE228056,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002106,spleen,MONDO:0019462,luna,SMZL,SMZL,age rule: age in years,aged,75 years,extracted field,male,GSE228056:SMZL2,SMZL2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.747947898172542,platform_constant,4.747947898172542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38828498;40374674,,GSM7113329,,,train,hesrt,samples/GSE228056/GSM7113329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7113330,spleen,disease,splenic marginal zone lymphoma,spleen,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2798,A spatial transcriptomics study of splenic marginal zone lymphomas (SMZL) and spleen healthy donor,GSE228056,GSE228056,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002106,spleen,MONDO:0019462,luna,SMZL,SMZL,age rule: age in years,aged,66 years,extracted field,female,GSE228056:SMZL3,SMZL3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.747947898172542,platform_constant,4.747947898172542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38828498;40374674,,GSM7113330,,,train,hesrt,samples/GSE228056/GSM7113330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM7113331,spleen,normal,,spleen,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,806,A spatial transcriptomics study of splenic marginal zone lymphomas (SMZL) and spleen healthy donor,GSE228056,GSE228056,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002106,spleen,,luna,healthy control,healthy control,luna,not stated,,extracted field,male,GSE228056:HD2,HD2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.747947898172529,platform_constant,4.747947898172529,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38828498;40374674,,GSM7113331,,,train,hesrt,samples/GSE228056/GSM7113331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7115963,kidney,disease,acute kidney injury,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,3555,Human Cortical Kidney Sections,GSE228169,GSE228169,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002492,luna,Acute Kidney Injury,Acute Kidney Injury,luna,not stated,,extracted field,male,GSE228169:D1,D1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.384146291484138,platform_constant,4.384146291484138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,SS-GSM7115963,same_section_cross_series,GSM7757568,train,hesrt,samples/GSE228169/GSM7115963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7115964,kidney,disease,acute kidney injury,kidney,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,3794,Human Cortical Kidney Sections,GSE228169,GSE228169,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002492,luna,Acute Kidney Injury,Acute Kidney Injury,luna,not stated,,extracted field,male,GSE228169:D15,D15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.385366059770765,platform_constant,4.385366059770765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7115964,,,train,hesrt,samples/GSE228169/GSM7115964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7116321,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4198,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,GSE228195,GSE228195,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Ifih1-/- Adar1wt/wt Alb-Cre+,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.1648386262367465,platform_constant,4.1648386262367465,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116321,,,val,hesrt,samples/GSE228195/GSM7116321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM7116322,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4538,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,GSE228195,GSE228195,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Ifih1-/- Adar1wt/wt Alb-Cre+,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.165116219508588,platform_constant,4.165116219508588,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116322,,,val,hesrt,samples/GSE228195/GSM7116322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7116323,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4579,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,GSE228195,GSE228195,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Ifih1-/- Adar1wt/wt Alb-Cre+,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.163953573316747,platform_constant,4.163953573316747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116323,,,val,hesrt,samples/GSE228195/GSM7116323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7116324,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2737,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,GSE228195,GSE228195,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Ifih1-/- Adar1wt/flox Alb-Cre+,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.16465115770981,platform_constant,4.16465115770981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116324,,,val,hesrt,samples/GSE228195/GSM7116324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7116325,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2928,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,GSE228195,GSE228195,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Ifih1-/- Adar1wt/flox Alb-Cre+,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.163255849924016,platform_constant,4.163255849924016,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116325,,,val,hesrt,samples/GSE228195/GSM7116325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7116326,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2868,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,GSE228195,GSE228195,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Ifih1-/- Adar1wt/flox Alb-Cre+,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.163255849924016,platform_constant,4.163255849924016,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116326,,,val,hesrt,samples/GSE228195/GSM7116326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM7116327,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2868,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,GSE228195,GSE228195,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Ifih1-/- Adar1flox/flox Alb-Cre+,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.163488398406275,platform_constant,4.163488398406275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116327,,,val,hesrt,samples/GSE228195/GSM7116327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM7116328,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2736,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,GSE228195,GSE228195,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Ifih1-/- Adar1flox/flox Alb-Cre+,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.165813820432265,platform_constant,4.165813820432265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116328,,,val,hesrt,samples/GSE228195/GSM7116328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM7116329,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2741,Hepatocyte-macrophage crosstalk via the PGRN-EGFR axis modulates ADAR1-mediated immunity in the liver -Spatial Transcriptomics,GSE228195,GSE228195,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Ifih1-/- Adar1flox/flox Alb-Cre+,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.163023327417954,platform_constant,4.163023327417954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38935501,,GSM7116329,,,val,hesrt,samples/GSE228195/GSM7116329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM7119402,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,male,Visium,Visium,True,fluorescence: yellow (heuristic),2657,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,16,extracted field,Male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.181740144984961,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119402,,,val,sda-all,samples/GSE228360/GSM7119402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119403,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,male,Visium,Visium,True,fluorescence: green (heuristic),1912,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,16,extracted field,Male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.184216030541901,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119403,,,val,sda-all,samples/GSE228360/GSM7119403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7119404,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,male,Visium,Visium,True,H&E,1893,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,16,extracted field,Male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.438319464902034,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119404,,,val,sda-all,samples/GSE228360/GSM7119404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119405,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,male,Visium,Visium,True,H&E,2347,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,16,extracted field,Male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.176427243915216,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119405,,,val,sda-all,samples/GSE228360/GSM7119405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7119406,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,male,Visium,Visium,True,H&E,2357,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,13,extracted field,Male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.184907349695156,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119406,,,val,sda-all,samples/GSE228360/GSM7119406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119407,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,male,Visium,Visium,True,H&E,4543,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,13,extracted field,Male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.175612787620365,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119407,,,val,sda-all,samples/GSE228360/GSM7119407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119408,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,male,Visium,Visium,True,H&E,1444,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,13,extracted field,Male,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.192421859066654,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119408,,,val,sda-all,samples/GSE228360/GSM7119408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119409,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,female,Visium,Visium,True,H&E,3267,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,9,extracted field,Female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.179905308311322,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119409,,,val,sda-all,samples/GSE228360/GSM7119409,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7119410,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,female,Visium,Visium,True,H&E,3248,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,9,extracted field,Female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.184337782704977,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119410,,,val,sda-all,samples/GSE228360/GSM7119410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7119411,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,female,Visium,Visium,True,H&E,2149,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,14,extracted field,Female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.178654071938838,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119411,,,val,sda-all,samples/GSE228360/GSM7119411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7119412,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,female,Visium,Visium,True,H&E,2625,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,14,extracted field,Female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.177708664063777,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119412,,,val,sda-all,samples/GSE228360/GSM7119412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7119413,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,juvenile,female,Visium,Visium,True,H&E,2448,Spatial and single cell transcriptomics reveals cellular crosstalk changes in ileal Crohn’s disease during inflammation,GSE228360,GSE228360,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,,MONDO:0005011,luna,,,age rule: bare number read as years,juvenile,14,extracted field,Female,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.1814904659872,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40059828,,GSM7119413,,,val,sda-all,samples/GSE228360/GSM7119413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7120222,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3792,Characterization of stress-susceptible cells and gene in mouse brain via Spatial Transcriptomics,GSE228394,GSE228394,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,adult,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.556740193177444,platform_constant,4.556740193177444,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38264685,,GSM7120222,,,train,hesrt,samples/GSE228394/GSM7120222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7120223,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3861,Characterization of stress-susceptible cells and gene in mouse brain via Spatial Transcriptomics,GSE228394,GSE228394,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Resilient,age rule: age with unit,adult,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.486225452424432,platform_constant,4.486225452424432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38264685,,GSM7120223,,,train,hesrt,samples/GSE228394/GSM7120223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7120224,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3790,Characterization of stress-susceptible cells and gene in mouse brain via Spatial Transcriptomics,GSE228394,GSE228394,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Susceptible,age rule: age with unit,adult,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.556740193177444,platform_constant,4.556740193177444,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38264685,,GSM7120224,,,train,hesrt,samples/GSE228394/GSM7120224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7123312,kidney,disease,Balkan nephropathy;chronic kidney disease,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2116,Aristolochic Acid Nephropathy 2 week time point of CD45+ cells,GSE228516,GSE228516,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0007416;MONDO:0005300,luna,,AAN CKD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.3853660597707425,platform_constant,4.3853660597707425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7123312,,,train,hesrt,samples/GSE228516/GSM7123312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7123558,bone,normal,,femur,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1078,Spatial transcriptomic profiling reveals local and domain-establishing regulatory signaling networks within the bone marrow,GSE228534,GSE228534,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000981,Femur,,luna,,,age rule: age with unit,adult,10 week old,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19691,counts,um,1.0,verified,4.276215138758491,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37926705,,GSM7123558,,,test,sda-all,samples/GSE228534/GSM7123558,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7123559,bone,normal,,femur,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1038,Spatial transcriptomic profiling reveals local and domain-establishing regulatory signaling networks within the bone marrow,GSE228534,GSE228534,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000981,Femur,,luna,,,age rule: age with unit,adult,10 week old,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19691,counts,um,1.0,verified,4.272131936008995,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37926705,,GSM7123559,,,test,sda-all,samples/GSE228534/GSM7123559,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7123560,bone,normal,,femur,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1223,Spatial transcriptomic profiling reveals local and domain-establishing regulatory signaling networks within the bone marrow,GSE228534,GSE228534,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000981,Femur,,luna,,,age rule: age with unit,adult,10 week old,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19586,counts,um,1.0,verified,4.421998433645894,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37926705,,GSM7123560,,,test,sda-all,samples/GSE228534/GSM7123560,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7123561,bone,normal,,femur,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1193,Spatial transcriptomic profiling reveals local and domain-establishing regulatory signaling networks within the bone marrow,GSE228534,GSE228534,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000981,Femur,,luna,,,age rule: age with unit,adult,10 week old,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19586,counts,um,1.0,verified,4.420626813686164,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37926705,,GSM7123561,,,test,sda-all,samples/GSE228534/GSM7123561,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7134911,eye,disease,lacrimal gland carcinoma;adenoid cystic carcinoma,lacrimal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3584,Spatial transcriptomics of adenoid cystic carcinoma of the lacrimal gland,GSE228685,GSE228685,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001817,Tumor section,MONDO:0002463;MONDO:0004971,luna,Adenoid cystic carcinoma of the lacrimal gland,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,1.010307195245044,platform_constant,1.010307195245044,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37370820,,GSM7134911,,,train,hesrt,samples/GSE228685/GSM7134911,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7146857,other,disease,psoriatic arthritis,synovial joint,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1389,Molecular reframing of fibroblasts during resolution of arthritis,GSE228982,GSE228982,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002217,synovial joint,MONDO:0011849,luna,psoriatic arthritis,psoriatic arthritis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9428570621074104,platform_constant,3.9428570621074104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38396288,,GSM7146857,,,train,hesrt,samples/GSE228982/GSM7146857,sda-tissue-disease-2.5,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7146858,other,disease,psoriatic arthritis,synovial joint,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1368,Molecular reframing of fibroblasts during resolution of arthritis,GSE228982,GSE228982,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002217,synovial joint,MONDO:0011849,luna,psoriatic arthritis,psoriatic arthritis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9428570621074104,platform_constant,3.9428570621074104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38396288,,GSM7146858,,,train,hesrt,samples/GSE228982/GSM7146858,sda-tissue-disease-2.5,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7146859,other,normal,,synovial joint,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,927,Molecular reframing of fibroblasts during resolution of arthritis,GSE228982,GSE228982,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002217,synovial joint,,luna,healthy,healthy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9428570621074104,platform_constant,3.9428570621074104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38396288,,GSM7146859,,,train,hesrt,samples/GSE228982/GSM7146859,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7146860,other,normal,,synovial joint,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,899,Molecular reframing of fibroblasts during resolution of arthritis,GSE228982,GSE228982,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002217,synovial joint,,luna,healthy,healthy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9428570621074104,platform_constant,3.9428570621074104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38396288,,GSM7146860,,,train,hesrt,samples/GSE228982/GSM7146860,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7156292,brain,normal,,,primary tissue,Ciona intestinalis,vase tunicate,adult,unknown,Visium,Visium,False,,492,Visium spatial transcriptomics of the neural complex of Ciona intestinalis type A,GSE229175,GSE229175,7719,Ciona intestinalis,7719,,False,False,GEO organism field,Ciona intestinalis,,luna,,neural complex,,luna,,WT,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18788,counts,pixel,4.041316950226493,platform_constant,,WITHHELD,,,image_review_fail,,human_visual_review,FAIL,图像与细胞/spot 错位,Image registration screen 2026-11-11: the whole block of spots is shifted down and to the right of the tissue. The image was removed on 2026-11-11. Expression values and coordinates equal the GEO deposit.,40970208,,GSM7156292,,,train,hesrt,samples/GSE229175/GSM7156292,sda-tissue-disease-2.4,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.22, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM7156293,brain,normal,,central nervous system,primary tissue,Ciona intestinalis,vase tunicate,adult,unknown,Visium,Visium,False,,424,Visium spatial transcriptomics of the neural complex of Ciona intestinalis type A,GSE229175,GSE229175,7719,Ciona intestinalis,7719,,False,False,GEO organism field,Ciona intestinalis,,luna,UBERON:0001017,neural complex,,luna,,WT,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18788,counts,pixel,4.2855343622607105,platform_constant,,WITHHELD,,,image_review_fail,,human_visual_review,FAIL,图像与细胞/spot 错位,Image registration screen 2026-11-11: the whole block of spots is shifted down and to the right of the tissue. The image was removed on 2026-11-11. Expression values and coordinates equal the GEO deposit.,40970208,,GSM7156293,,,train,hesrt,samples/GSE229175/GSM7156293,sda-tissue-disease-2.4,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7156294,brain,normal,,central nervous system,primary tissue,Ciona intestinalis,vase tunicate,adult,unknown,Visium,Visium,False,,446,Visium spatial transcriptomics of the neural complex of Ciona intestinalis type A,GSE229175,GSE229175,7719,Ciona intestinalis,7719,,False,False,GEO organism field,Ciona intestinalis,,luna,UBERON:0001017,neural complex,,luna,,WT,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18788,counts,pixel,4.318580697036812,platform_constant,,WITHHELD,,,image_review_fail,,human_visual_review,FAIL,图像与细胞/spot 错位,Image registration screen 2026-11-11: the whole block of spots is shifted down and to the right of the tissue. The image was removed on 2026-11-11. Expression values and coordinates equal the GEO deposit.,40970208,,GSM7156294,,,train,hesrt,samples/GSE229175/GSM7156294,sda-tissue-disease-2.4,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7156295,brain,normal,,central nervous system,primary tissue,Ciona intestinalis,vase tunicate,adult,unknown,Visium,Visium,False,,648,Visium spatial transcriptomics of the neural complex of Ciona intestinalis type A,GSE229175,GSE229175,7719,Ciona intestinalis,7719,,False,False,GEO organism field,Ciona intestinalis,,luna,UBERON:0001017,neural complex,,luna,,WT,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18788,counts,pixel,4.252557856758691,platform_constant,,WITHHELD,,,image_review_fail,,human_visual_review,FAIL,图像与细胞/spot 错位,Image registration screen 2026-11-11: the whole block of spots is shifted down and to the right of the tissue. The image was removed on 2026-11-11. Expression values and coordinates equal the GEO deposit.,40970208,,GSM7156295,,,train,hesrt,samples/GSE229175/GSM7156295,sda-tissue-disease-2.4,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM7164655,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,979,Spatial transcriptome of developmental mouse brain reveals temporal dynamics of gene expressions and heterogeneity of the claustrum,GSE229508,GSE229508,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,forebrain,,luna,,,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.339849705475763,platform_constant,4.339849705475763,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40210990,,GSM7164655,,,train,hesrt,samples/GSE229508/GSM7164655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7164656,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E-like (heuristic),1243,Spatial transcriptome of developmental mouse brain reveals temporal dynamics of gene expressions and heterogeneity of the claustrum,GSE229508,GSE229508,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,Forebrain,,luna,,WT,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.3425740514866735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40210990,,GSM7164656,,,train,sda-all,samples/GSE229508/GSM7164656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7169587,skeletal muscle,normal,,electric organ,primary tissue,Electrophorus voltai,,not stated,unknown,Visium,Visium,True,H&E,2677,Spatial transcriptome of muscle sample from the main electric organ of electric eel,GSE229635,GSE229635,2609070,Electrophorus voltai,2609070,,False,False,GEO organism field,Electrophorus voltai,,luna,UBERON:0006869,the main electric organ,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,23221,counts,pixel,4.989781254820793,platform_constant,4.989781254820793,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7169587,,,train,hesrt,samples/GSE229635/GSM7169587,sda-tissue-disease-2.4,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7169588,skeletal muscle,normal,,electric organ,primary tissue,Electrophorus voltai,,not stated,unknown,Visium,Visium,True,H&E,2862,Spatial transcriptome of muscle sample from the main electric organ of electric eel,GSE229635,GSE229635,2609070,Electrophorus voltai,2609070,,False,False,GEO organism field,Electrophorus voltai,,luna,UBERON:0006869,the main electric organ,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,23221,counts,pixel,4.989781254820793,platform_constant,4.989781254820793,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7169588,,,train,hesrt,samples/GSE229635/GSM7169588,sda-tissue-disease-2.4,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7169589,skeletal muscle,normal,,electric organ,primary tissue,Electrophorus voltai,,not stated,unknown,Visium,Visium,True,H&E,2778,Spatial transcriptome of muscle sample from the main electric organ of electric eel,GSE229635,GSE229635,2609070,Electrophorus voltai,2609070,,False,False,GEO organism field,Electrophorus voltai,,luna,UBERON:0006869,the main electric organ,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,23221,counts,pixel,4.989781254820793,platform_constant,4.989781254820793,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7169589,,,train,hesrt,samples/GSE229635/GSM7169589,sda-tissue-disease-2.4,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7173404,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,1122,"Bacterial TLR2/6 Ligands Block Ciliogenesis, Derepress Hedgehog Signaling, and Expand the Neocortex",GSE229699,GSE229699,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,embryonic brain,,luna,,ampicillin control,age rule: embryonic day,embryonic,12 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.647484024167604,platform_constant,1.647484024167604,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37052506,,GSM7173404,,,train,hesrt,samples/GSE229699/GSM7173404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.93, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7173405,brain,disease,pneumonia,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,914,"Bacterial TLR2/6 Ligands Block Ciliogenesis, Derepress Hedgehog Signaling, and Expand the Neocortex",GSE229699,GSE229699,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,embryonic brain,MONDO:0005249,mondo_predicate (Luna: perturbation),,S. pneumoniae + ampicillin challenge,age rule: embryonic day,embryonic,12 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.6456828887440138,platform_constant,1.6456828887440138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37052506,,GSM7173405,,,train,hesrt,samples/GSE229699/GSM7173405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM7173406,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,1817,"Bacterial TLR2/6 Ligands Block Ciliogenesis, Derepress Hedgehog Signaling, and Expand the Neocortex",GSE229699,GSE229699,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,embryonic brain,,luna,,ampicillin control,age rule: embryonic day,embryonic,12 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.6453800659822515,platform_constant,1.6453800659822515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37052506,,GSM7173406,,,train,hesrt,samples/GSE229699/GSM7173406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.73, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7173407,brain,disease,pneumonia,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,967,"Bacterial TLR2/6 Ligands Block Ciliogenesis, Derepress Hedgehog Signaling, and Expand the Neocortex",GSE229699,GSE229699,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,embryonic brain,MONDO:0005249,mondo_predicate (Luna: perturbation),,S. pneumoniae + ampicillin challenge,age rule: embryonic day,embryonic,12 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.6465454419824532,platform_constant,1.6465454419824532,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37052506,,GSM7173407,,,train,hesrt,samples/GSE229699/GSM7173407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM7173411,brain,disease,pneumonia,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,1336,"Bacterial TLR2/6 Ligands Block Ciliogenesis, Derepress Hedgehog Signaling, and Expand the Neocortex",GSE229699,GSE229699,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,embryonic brain,MONDO:0005249,mondo_predicate (Luna: perturbation),,S. pneumoniae + ampicillin challenge,age rule: embryonic day,embryonic,12 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,1.6384600696878175,platform_constant,1.6384600696878175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37052506,,GSM7173411,,,train,hesrt,samples/GSE229699/GSM7173411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7178570,testis,disease,testicular germ cell tumor,testis,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1828,Single-cell Multi-omics Analysis of Human Testicular Germ Cell Tumor Reveals its Molecular Features and Microenvironment II,GSE229823,GSE229823,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000473,testis tumor,MONDO:0010108,luna,seminoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.064953130974132,platform_constant,4.064953130974132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7178570,,,train,hesrt,samples/GSE229823/GSM7178570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7178571,testis,disease,testicular germ cell tumor,testis,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2220,Single-cell Multi-omics Analysis of Human Testicular Germ Cell Tumor Reveals its Molecular Features and Microenvironment II,GSE229823,GSE229823,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000473,testis tumor,MONDO:0010108,luna,seminoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.455607467947094,platform_constant,4.455607467947094,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7178571,,,train,hesrt,samples/GSE229823/GSM7178571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7178572,testis,disease,testicular germ cell tumor,testis,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2625,Single-cell Multi-omics Analysis of Human Testicular Germ Cell Tumor Reveals its Molecular Features and Microenvironment II,GSE229823,GSE229823,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000473,testis tumor,MONDO:0010108,luna,seminoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.05490635482078,platform_constant,4.05490635482078,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7178572,,,train,hesrt,samples/GSE229823/GSM7178572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7179596,pancreas,disease,mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1586,Identification of spatially-resolved markers of malignant transformation in Intraductal Papillary Mucinous Neoplasms. [Visium],GSE229877,GSE229877,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic Tissue,MONDO:0024338,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38553466,,GSM7179596,,,train,sda-all,samples/GSE229877/GSM7179596,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7179597,pancreas,disease,mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1737,Identification of spatially-resolved markers of malignant transformation in Intraductal Papillary Mucinous Neoplasms. [Visium],GSE229877,GSE229877,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic Tissue,MONDO:0024338,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38553466,,GSM7179597,,,train,sda-all,samples/GSE229877/GSM7179597,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7179598,pancreas,disease,mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1143,Identification of spatially-resolved markers of malignant transformation in Intraductal Papillary Mucinous Neoplasms. [Visium],GSE229877,GSE229877,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic Tissue,MONDO:0024338,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38553466,,GSM7179598,,,train,sda-all,samples/GSE229877/GSM7179598,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7179599,pancreas,disease,mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1356,Identification of spatially-resolved markers of malignant transformation in Intraductal Papillary Mucinous Neoplasms. [Visium],GSE229877,GSE229877,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic Tissue,MONDO:0024338,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38553466,,GSM7179599,,,train,sda-all,samples/GSE229877/GSM7179599,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7186932,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3787,Orthotopic 4T1 tumors spatial transcriptomics,GSE230098,GSE230098,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Primary tumor,MONDO:0005070,luna,,Orthotopic 4T1 tumor-bearing,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.199197806582958,platform_constant,4.199197806582958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40670787,,GSM7186932,,,train,hesrt,samples/GSE230098/GSM7186932,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7186933,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4392,Orthotopic 4T1 tumors spatial transcriptomics,GSE230098,GSE230098,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Primary tumor,MONDO:0005070,luna,,Orthotopic 4T1 tumor-bearing,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.132894683321118,platform_constant,4.132894683321118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40670787,,GSM7186933,,,train,hesrt,samples/GSE230098/GSM7186933,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7186934,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4185,Orthotopic 4T1 tumors spatial transcriptomics,GSE230098,GSE230098,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Primary tumor,MONDO:0005070,luna,,Orthotopic 4T1 tumor-bearing,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.199197806582937,platform_constant,4.199197806582937,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40670787,,GSM7186934,,,train,hesrt,samples/GSE230098/GSM7186934,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7186935,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3924,Orthotopic 4T1 tumors spatial transcriptomics,GSE230098,GSE230098,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Primary tumor,MONDO:0005070,luna,,Orthotopic 4T1 tumor-bearing,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.199197806582958,platform_constant,4.199197806582958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40670787,,GSM7186935,,,train,hesrt,samples/GSE230098/GSM7186935,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7192449,brain,disease,primary central nervous system lymphoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4517,Spatial single cell analysis of tumor microenvironment remodeling pattern in primary central nervous system lymphoma,GSE230207,GSE230207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,PCNSL,MONDO:0002571,luna,primary central nervous system lymphoma,hot,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17922,counts,pixel,4.5878702399814,platform_constant,4.5878702399814,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37120690,,GSM7192449,,,train,hesrt,samples/GSE230207/GSM7192449,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7192450,brain,disease,primary central nervous system lymphoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4395,Spatial single cell analysis of tumor microenvironment remodeling pattern in primary central nervous system lymphoma,GSE230207,GSE230207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,PCNSL,MONDO:0002571,luna,primary central nervous system lymphoma,cold,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17922,counts,pixel,4.131361143976745,platform_constant,4.131361143976745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37120690,,GSM7192450,,,train,hesrt,samples/GSE230207/GSM7192450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7192451,brain,disease,primary central nervous system lymphoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4349,Spatial single cell analysis of tumor microenvironment remodeling pattern in primary central nervous system lymphoma,GSE230207,GSE230207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,PCNSL,MONDO:0002571,luna,primary central nervous system lymphoma,IME,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17922,counts,pixel,4.131361143976745,platform_constant,4.131361143976745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37120690,,GSM7192451,,,train,hesrt,samples/GSE230207/GSM7192451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7192453,brain,disease,primary central nervous system lymphoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4669,Spatial single cell analysis of tumor microenvironment remodeling pattern in primary central nervous system lymphoma,GSE230207,GSE230207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,PCNSL,MONDO:0002571,luna,primary central nervous system lymphoma,IMS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17922,counts,pixel,4.529532288259535,platform_constant,4.529532288259535,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37120690,,GSM7192453,,,train,hesrt,samples/GSE230207/GSM7192453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7211257,prostate,disease,cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium CytAssist,True,H&E,4397,Spatial transcriptomics of de novo NEPC and ARPC,GSE230282,GSE230282,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002367,prostatic cancer,MONDO:0004992,luna,"NEPC pT4N1M0 and ARPC pT2aN0M0, Gleason score of 4+4",de novo NEPC and ARPC,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,37082,counts,pixel,6.881358927538902,platform_constant,6.881358927538902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37240308,,GSM7211257,,,train,hesrt,samples/GSE230282/GSM7211257,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7221915,thyroid,disease,thyroid gland papillary carcinoma;Hashimoto thyroiditis,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3647,Spatial transcriptome gene expression profile in 2 patients with Hashimoto's thyroiditis and 2 patients with papillary thyroid cancer combined with Hashimoto's thyroiditis.,GSE230424,GSE230424,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,thyroid,MONDO:0005075;MONDO:0007699,mondo_predicate,,,luna,not stated,,not stated,,GSE230424:P1,P1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4694783941038249,platform_constant,0.4999970956818088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39178310,10.1158/2326-6066.cir-23-1047,GSM7221915,,,train,hesrt,samples/GSE230424/GSM7221915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7221916,thyroid,disease,thyroid gland papillary carcinoma;Hashimoto thyroiditis,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3154,Spatial transcriptome gene expression profile in 2 patients with Hashimoto's thyroiditis and 2 patients with papillary thyroid cancer combined with Hashimoto's thyroiditis.,GSE230424,GSE230424,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,thyroid,MONDO:0005075;MONDO:0007699,luna,,,luna,not stated,,not stated,,GSE230424:P2,P2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4694783941038249,platform_constant,0.4999902961416205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39178310,10.1158/2326-6066.cir-23-1047,GSM7221916,,,train,hesrt,samples/GSE230424/GSM7221916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7221917,thyroid,disease,thyroid gland papillary carcinoma;Hashimoto thyroiditis,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4062,Spatial transcriptome gene expression profile in 2 patients with Hashimoto's thyroiditis and 2 patients with papillary thyroid cancer combined with Hashimoto's thyroiditis.,GSE230424,GSE230424,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,thyroid,MONDO:0005075;MONDO:0007699,luna,,,luna,not stated,,not stated,,GSE230424:P3,P3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4694783941038249,platform_constant,0.4999895685634026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39178310,10.1158/2326-6066.cir-23-1047,GSM7221917,,,train,hesrt,samples/GSE230424/GSM7221917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7221918,thyroid,disease,thyroid gland papillary carcinoma;Hashimoto thyroiditis,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4626,Spatial transcriptome gene expression profile in 2 patients with Hashimoto's thyroiditis and 2 patients with papillary thyroid cancer combined with Hashimoto's thyroiditis.,GSE230424,GSE230424,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,thyroid,MONDO:0005075;MONDO:0007699,luna,,,luna,not stated,,not stated,,GSE230424:P4,P4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4694783941038249,platform_constant,0.5000015780429101,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39178310,10.1158/2326-6066.cir-23-1047,GSM7221918,,,train,hesrt,samples/GSE230424/GSM7221918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7234197,other,normal,,trunk,primary tissue,Gallus gallus,chicken,embryonic,unknown,Slide-seq,Slide-seq,False,,20983,Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Slide-seq],GSE230776,GSE230776,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,luna,UBERON:0002100,embryonic trunk,,luna,,wild-type,luna,embryonic,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,17233,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,36840366,,GSM7234197,,,train,sda-all,samples/GSE230776/GSM7234197,sda-tissue-disease-2.4,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM7234200,other,normal,,trunk,primary tissue,Gallus gallus,chicken,embryonic,unknown,Visium,Visium,False,,4418,Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Spatial Transcriptomics],GSE230778,GSE230778+GSE230780,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,luna,UBERON:0002100,embryonic trunk,,luna,,wild-type,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,24356,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36840366,,GSM7234200,,,train,sda-all,samples/GSE230778/GSM7234200,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.99}",,
GSM7234201,other,normal,,trunk,primary tissue,Gallus gallus,chicken,embryonic,unknown,Visium,Visium,False,,3123,Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Spatial Transcriptomics],GSE230778,GSE230778+GSE230780,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,luna,UBERON:0002100,embryonic trunk,,luna,,wild-type,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,24356,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36840366,,GSM7234201,,,train,sda-all,samples/GSE230778/GSM7234201,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7234202,other,normal,,trunk,primary tissue,Gallus gallus,chicken,embryonic,unknown,Visium,Visium,False,,4935,Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Spatial Transcriptomics],GSE230778,GSE230778+GSE230780,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,luna,UBERON:0002100,embryonic trunk,,luna,,wild-type,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,24356,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36840366,,GSM7234202,,,train,sda-all,samples/GSE230778/GSM7234202,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7234203,other,normal,,trunk,primary tissue,Gallus gallus,chicken,embryonic,unknown,Visium,Visium,False,,4806,Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Spatial Transcriptomics],GSE230778,GSE230778+GSE230780,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,luna,UBERON:0002100,embryonic trunk,,luna,,wild-type,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,24356,counts,um,1.0,verified,,,,,,,VERIFIED,,,,36840366,,GSM7234203,,,train,sda-all,samples/GSE230778/GSM7234203,sda-tissue-disease-2.4,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7267702,lung,disease,,lung,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,3532,SDePER: a hybrid machine learning and regression method for cell-type deconvolution of spatial barcoding-based transcriptomic data,GSE231385,GSE231385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Fibrotic Lung,,luna,Idiopathic Pulmonary Fibrosis,Idiopathic Pulmonary Fibrosis,age rule: bare number read as years,adult,63,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32078,counts,pixel,2.3570226039551585,platform_constant,2.3570226039551585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39402626,,GSM7267702,,,train,hesrt,samples/GSE231385/GSM7267702,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7286753,heart,normal,,heart,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,882,A masked generative graph representation learning framework empowering precise spatial domain identification,GSE231496,GSE231496,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,human embryonic heart,,luna,,,luna,fetal,9 weeks of gestation,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.302271502637329,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42178226,,GSM7286753,,,train,sda-all,samples/GSE231496/GSM7286753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8342992,skin,perturbation,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,62453,The use of ectopic volar fibroblasts to modify skin identity,GSE231998,GSE231998,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,Skin,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,522,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,39236183,,GSM8342992,,,train,sda-all,samples/GSE231998/GSM8342992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7336995,tonsil,normal,,tonsil,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,73,HIV-1 activates oxidative phosphorylation in infected CD4 T cells in a human tonsil explant model,GSE232477,GSE232477,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002372,tonsils,,luna,,unexposed,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36602,counts,um,1.0,verified,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,"registration is correct, but the sample may be unusable",37325659,,GSM7336995,,,train,sda-all,samples/GSE232477/GSM7336995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.52, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM7372755,other,disease,rheumatoid arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1878,Synovial Th17 transdifferentiation into exTh17 sustains chronic IL-17-independent  inflammatory arthritis [Visium],GSE232734,GSE232734,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,Human Synovium,MONDO:0008383,luna,rheumatoid arthritis,"rheumatoid arthritis, ACPA and RF positive with active disease",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.198157507486946,platform_constant,7.198157507486946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202149,,GSM7372755,,,train,hesrt,samples/GSE232734/GSM7372755,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7372756,other,disease,rheumatoid arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,836,Synovial Th17 transdifferentiation into exTh17 sustains chronic IL-17-independent  inflammatory arthritis [Visium],GSE232734,GSE232734,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,Human Synovium,MONDO:0008383,luna,rheumatoid arthritis,"rheumatoid arthritis, ACPA and RF positive with active disease",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.198157507486946,platform_constant,7.198157507486946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202149,,GSM7372756,,,train,hesrt,samples/GSE232734/GSM7372756,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7373501,other,disease,plexiform neurofibroma;neurofibromatosis type 1,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1519,Integration of single-nuclei RNA-sequencing and spatial transcriptomics defines the complex microenvironment of NF1-associated plexiform neurofibromas,GSE232766,GSE232766,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Plexiform Neurofibroma,MONDO:0003304;MONDO:0018975,luna,Plexiform Neurofibroma,Plexiform Neurofibroma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4694835680751174,platform_constant,0.5000035620908048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37770931,,GSM7373501,,,train,hesrt,samples/GSE232766/GSM7373501,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7373502,other,disease,plexiform neurofibroma;neurofibromatosis type 1,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3076,Integration of single-nuclei RNA-sequencing and spatial transcriptomics defines the complex microenvironment of NF1-associated plexiform neurofibromas,GSE232766,GSE232766,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Plexiform Neurofibroma,MONDO:0003304;MONDO:0018975,luna,Plexiform Neurofibroma,Plexiform Neurofibroma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4694835680751174,platform_constant,0.5000035620908048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37770931,,GSM7373502,,,train,hesrt,samples/GSE232766/GSM7373502,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7373503,other,disease,plexiform neurofibroma;neurofibromatosis type 1,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1591,Integration of single-nuclei RNA-sequencing and spatial transcriptomics defines the complex microenvironment of NF1-associated plexiform neurofibromas,GSE232766,GSE232766,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Plexiform Neurofibroma,MONDO:0003304;MONDO:0018975,luna,Plexiform Neurofibroma,Plexiform Neurofibroma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4694835680751174,platform_constant,0.5000035620908048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37770931,,GSM7373503,,,train,hesrt,samples/GSE232766/GSM7373503,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7373504,other,disease,plexiform neurofibroma;neurofibromatosis type 1,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2364,Integration of single-nuclei RNA-sequencing and spatial transcriptomics defines the complex microenvironment of NF1-associated plexiform neurofibromas,GSE232766,GSE232766,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Plexiform Neurofibroma,MONDO:0003304;MONDO:0018975,luna,Plexiform Neurofibroma,Plexiform Neurofibroma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4694835680751174,platform_constant,0.5000035620908048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37770931,,GSM7373504,,,train,hesrt,samples/GSE232766/GSM7373504,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7392310,brain,disease,,striatum,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2856,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002435,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392310,,,train,hesrt,samples/GSE232910/GSM7392310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.89, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7392311,brain,disease,,striatum,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3002,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002435,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392311,,,train,hesrt,samples/GSE232910/GSM7392311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.84, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM7392312,brain,disease,,striatum,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3163,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002435,brain,,luna,,control,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392312,,,train,hesrt,samples/GSE232910/GSM7392312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 0.9400000000000001, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM7392313,brain,disease,,striatum,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2913,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002435,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392313,,,train,hesrt,samples/GSE232910/GSM7392313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.9, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM7392314,brain,disease,,striatum,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2675,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002435,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.1205420098375045,platform_constant,4.1205420098375045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392314,,,train,hesrt,samples/GSE232910/GSM7392314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.8300000000000001, ""life_stage"": 0.98}",,
GSM7392315,brain,disease,,striatum,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3120,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002435,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.148959456753987,platform_constant,4.148959456753987,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392315,,,train,hesrt,samples/GSE232910/GSM7392315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.8200000000000001, ""life_stage"": 0.9500000000000001}",,
GSM7392316,brain,disease,,striatum,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2918,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002435,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.156131367191437,platform_constant,4.156131367191437,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392316,,,train,hesrt,samples/GSE232910/GSM7392316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.78, ""life_stage"": 0.98}",,
GSM7392317,brain,disease,,striatum,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3017,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002435,brain,,luna,,control,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.148959456753987,platform_constant,4.148959456753987,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392317,,,train,hesrt,samples/GSE232910/GSM7392317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.8, ""life_stage"": 0.98}",,
GSM7392318,brain,disease,,substantia nigra,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2964,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002038,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.148965623454878,platform_constant,4.148965623454878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392318,,,train,hesrt,samples/GSE232910/GSM7392318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM7392319,brain,disease,,substantia nigra,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3357,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002038,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.148959456753968,platform_constant,4.148959456753968,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392319,,,train,hesrt,samples/GSE232910/GSM7392319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7392320,brain,disease,,substantia nigra,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3601,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002038,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.148940956816233,platform_constant,4.148940956816233,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392320,,,train,hesrt,samples/GSE232910/GSM7392320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM7392321,brain,disease,,substantia nigra,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3504,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002038,brain,,luna,,control,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.134708009628609,platform_constant,4.134708009628609,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392321,,,train,hesrt,samples/GSE232910/GSM7392321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM7392322,brain,disease,,substantia nigra,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3617,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002038,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.185880309733634,platform_constant,4.185880309733634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392322,,,train,hesrt,samples/GSE232910/GSM7392322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7392323,brain,disease,,striatum,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3116,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002435,brain,,luna,,6-OHDA lesioned,age rule: age with unit,adult,8 weeks,not stated,,GSE232910:brain,brain,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.185880309733614,platform_constant,4.185880309733614,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392323,,,train,hesrt,samples/GSE232910/GSM7392323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 0.9, ""life_stage"": 0.92}",,
GSM7392324,brain,disease,Parkinson disease,caudate nucleus,primary tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,3900,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001873,brain,MONDO:0005180,luna,Parkinson's disease,Parkinson's disease,age rule: age in years,aged,94 years,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.171520556824052,platform_constant,4.171520556824052,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392324,,,train,hesrt,samples/GSE232910/GSM7392324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7392325,brain,disease,Parkinson disease,caudate nucleus,primary tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,4968,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001873,brain,MONDO:0005180,luna,Parkinson's disease,Parkinson's disease,age rule: age in years,aged,94 years,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.1786880967760025,platform_constant,4.1786880967760025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392325,,,train,hesrt,samples/GSE232910/GSM7392325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7392326,brain,disease,Parkinson disease,caudate nucleus,primary tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,4984,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001873,brain,MONDO:0005180,luna,Parkinson's disease,Parkinson's disease,age rule: age in years,aged,94 years,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.193097323315207,platform_constant,4.193097323315207,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392326,,,train,hesrt,samples/GSE232910/GSM7392326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7392327,brain,disease,Parkinson disease,caudate nucleus,primary tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,4868,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001873,brain,MONDO:0005180,luna,Parkinson's disease,Parkinson's disease,age rule: age in years,aged,94 years,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.193078626569605,platform_constant,4.193078626569605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392327,,,train,hesrt,samples/GSE232910/GSM7392327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM7392328,brain,disease,Parkinson disease,caudate nucleus,primary tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,4633,Spatial Multimodal Analysis: MALDI-MSI and Spatial Transcriptomics within the same tissue section,GSE232910,GSE232910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001873,brain,MONDO:0005180,luna,Parkinson's disease,Parkinson's disease,age rule: age in years,aged,94 years,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.193078626569605,platform_constant,4.193078626569605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37667091,,GSM7392328,,,train,hesrt,samples/GSE232910/GSM7392328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7412831,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2607,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412831,,,train,sda-all,samples/GSE233208/GSM7412831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412832,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2424,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412832,,,train,sda-all,samples/GSE233208/GSM7412832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412833,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2206,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412833,,,train,sda-all,samples/GSE233208/GSM7412833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412834,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2629,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X?,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412834,,,train,sda-all,samples/GSE233208/GSM7412834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412835,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2782,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412835,,,train,sda-all,samples/GSE233208/GSM7412835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412836,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2846,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412836,,,train,sda-all,samples/GSE233208/GSM7412836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412837,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2482,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412837,,,train,sda-all,samples/GSE233208/GSM7412837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412838,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2772,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412838,,,train,sda-all,samples/GSE233208/GSM7412838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412839,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2573,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412839,,,train,sda-all,samples/GSE233208/GSM7412839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7412840,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2755,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412840,,,train,sda-all,samples/GSE233208/GSM7412840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412841,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2728,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412841,,,train,sda-all,samples/GSE233208/GSM7412841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412842,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2654,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412842,,,train,sda-all,samples/GSE233208/GSM7412842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412843,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2198,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412843,,,train,sda-all,samples/GSE233208/GSM7412843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412844,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,3160,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412844,,,train,sda-all,samples/GSE233208/GSM7412844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412845,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2969,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412845,,,train,sda-all,samples/GSE233208/GSM7412845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412846,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2721,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412846,,,train,sda-all,samples/GSE233208/GSM7412846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412848,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2533,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412848,,,train,sda-all,samples/GSE233208/GSM7412848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412850,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2408,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412850,,,train,sda-all,samples/GSE233208/GSM7412850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412852,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2771,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412852,,,train,sda-all,samples/GSE233208/GSM7412852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412853,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2520,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412853,,,train,sda-all,samples/GSE233208/GSM7412853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412855,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2365,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412855,,,train,sda-all,samples/GSE233208/GSM7412855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412857,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2251,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412857,,,train,sda-all,samples/GSE233208/GSM7412857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412859,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2476,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412859,,,train,sda-all,samples/GSE233208/GSM7412859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412861,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2657,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412861,,,train,sda-all,samples/GSE233208/GSM7412861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412864,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2338,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412864,,,train,sda-all,samples/GSE233208/GSM7412864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412865,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2442,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412865,,,train,sda-all,samples/GSE233208/GSM7412865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412867,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2914,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412867,,,train,sda-all,samples/GSE233208/GSM7412867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412869,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2408,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412869,,,train,sda-all,samples/GSE233208/GSM7412869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412871,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2741,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412871,,,train,sda-all,samples/GSE233208/GSM7412871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412872,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2495,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412872,,,train,sda-all,samples/GSE233208/GSM7412872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412873,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2706,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X?,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412873,,,train,sda-all,samples/GSE233208/GSM7412873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412874,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2479,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412874,,,train,sda-all,samples/GSE233208/GSM7412874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412875,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2602,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412875,,,train,sda-all,samples/GSE233208/GSM7412875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412876,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,3163,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412876,,,train,sda-all,samples/GSE233208/GSM7412876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412877,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2609,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412877,,,train,sda-all,samples/GSE233208/GSM7412877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412878,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2754,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412878,,,train,sda-all,samples/GSE233208/GSM7412878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412879,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,False,,2615,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,4mo,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412879,,,train,sda-all,samples/GSE233208/GSM7412879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412881,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,False,,2831,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412881,,,train,sda-all,samples/GSE233208/GSM7412881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412883,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,False,,2257,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,5X,Mouse_Visium,age rule: age with unit,adult,4mo,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412883,,,train,sda-all,samples/GSE233208/GSM7412883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7412885,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,False,,2994,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412885,,,train,sda-all,samples/GSE233208/GSM7412885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7412887,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2805,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,manual,5X,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412887,,,train,sda-all,samples/GSE233208/GSM7412887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": null, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7412888,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2447,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412888,,,train,sda-all,samples/GSE233208/GSM7412888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412889,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2791,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,manual,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412889,,,train,sda-all,samples/GSE233208/GSM7412889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": null, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412890,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2676,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412890,,,train,sda-all,samples/GSE233208/GSM7412890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412891,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2992,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,manual,5X,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412891,,,train,sda-all,samples/GSE233208/GSM7412891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412892,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,3009,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412892,,,train,sda-all,samples/GSE233208/GSM7412892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412893,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2788,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,manual,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412893,,,train,sda-all,samples/GSE233208/GSM7412893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412894,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2847,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412894,,,train,sda-all,samples/GSE233208/GSM7412894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412895,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2567,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412895,,,train,sda-all,samples/GSE233208/GSM7412895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412896,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2791,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412896,,,train,sda-all,samples/GSE233208/GSM7412896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412897,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2439,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412897,,,train,sda-all,samples/GSE233208/GSM7412897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412898,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2164,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412898,,,train,sda-all,samples/GSE233208/GSM7412898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7412899,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2652,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412899,,,train,sda-all,samples/GSE233208/GSM7412899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412900,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2797,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412900,,,train,sda-all,samples/GSE233208/GSM7412900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412901,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2533,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412901,,,train,sda-all,samples/GSE233208/GSM7412901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412902,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2387,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412902,,,train,sda-all,samples/GSE233208/GSM7412902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412903,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2340,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412903,,,train,sda-all,samples/GSE233208/GSM7412903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412904,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2856,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412904,,,train,sda-all,samples/GSE233208/GSM7412904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412905,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2636,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412905,,,train,sda-all,samples/GSE233208/GSM7412905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412906,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2206,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412906,,,train,sda-all,samples/GSE233208/GSM7412906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412907,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2795,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412907,,,train,sda-all,samples/GSE233208/GSM7412907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412908,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2585,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412908,,,train,sda-all,samples/GSE233208/GSM7412908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412909,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2863,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412909,,,train,sda-all,samples/GSE233208/GSM7412909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412910,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2189,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412910,,,train,sda-all,samples/GSE233208/GSM7412910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412912,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2994,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412912,,,train,sda-all,samples/GSE233208/GSM7412912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412913,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2964,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412913,,,train,sda-all,samples/GSE233208/GSM7412913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412914,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2927,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412914,,,train,sda-all,samples/GSE233208/GSM7412914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412915,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2744,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412915,,,train,sda-all,samples/GSE233208/GSM7412915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM7412916,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2711,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,4mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412916,,,train,sda-all,samples/GSE233208/GSM7412916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412917,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2710,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412917,,,train,sda-all,samples/GSE233208/GSM7412917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7412918,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2827,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412918,,,train,sda-all,samples/GSE233208/GSM7412918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412919,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2529,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412919,,,train,sda-all,samples/GSE233208/GSM7412919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412920,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2783,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412920,,,train,sda-all,samples/GSE233208/GSM7412920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412921,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2697,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412921,,,train,sda-all,samples/GSE233208/GSM7412921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412922,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,2851,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412922,,,train,sda-all,samples/GSE233208/GSM7412922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412923,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2670,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412923,,,train,sda-all,samples/GSE233208/GSM7412923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412924,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2743,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,6mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412924,,,train,sda-all,samples/GSE233208/GSM7412924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412925,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2636,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412925,,,train,sda-all,samples/GSE233208/GSM7412925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412926,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2730,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,WT,Mouse_Visium,age rule: age with unit,adult,12mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412926,,,train,sda-all,samples/GSE233208/GSM7412926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412927,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,2743,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0004975,luna,5X,Mouse_Visium,age rule: age with unit,adult,8mo,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412927,,,train,sda-all,samples/GSE233208/GSM7412927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7412928,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,2560,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,,luna,Control,Human_Visium,age rule: bare number read as years,aged,74,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412928,,,train,sda-all,samples/GSE233208/GSM7412928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412930,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,2045,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,earlyAD,Human_Visium,age rule: bare number read as years,aged,86,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412930,,,train,sda-all,samples/GSE233208/GSM7412930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412932,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,3069,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,AD,Human_Visium,age rule: bare number read as years,aged,87,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412932,,,train,sda-all,samples/GSE233208/GSM7412932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412934,brain,disease,Alzheimer disease;Down syndrome;syndromic disease,prefrontal cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,False,,3099,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975;MONDO:0008608;MONDO:0002254,luna,AD_DS,Human_Visium,age rule: bare number read as years,adult,63,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412934,,,train,sda-all,samples/GSE233208/GSM7412934,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412936,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,2471,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,,luna,Control,Human_Visium,age rule: bare number read as years,aged,73,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412936,,,train,sda-all,samples/GSE233208/GSM7412936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412938,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,3334,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,AD,Human_Visium,age rule: bare number read as years,aged,90,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412938,,,train,sda-all,samples/GSE233208/GSM7412938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412940,brain,disease,Alzheimer disease;Down syndrome,prefrontal cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,False,,3871,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975;MONDO:0008608,luna,AD_DS,Human_Visium,age rule: bare number read as years,adult,58,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412940,,,train,sda-all,samples/GSE233208/GSM7412940,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412942,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,3459,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,,luna,Control,Human_Visium,age rule: bare number read as years,aged,74,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412942,,,train,sda-all,samples/GSE233208/GSM7412942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412943,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,2213,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,earlyAD,Human_Visium,age rule: bare number read as years,aged,86,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412943,,,train,sda-all,samples/GSE233208/GSM7412943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412944,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,3423,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,AD,Human_Visium,age rule: bare number read as years,aged,87,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412944,,,train,sda-all,samples/GSE233208/GSM7412944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412945,brain,disease,Alzheimer disease;Down syndrome,prefrontal cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,False,,2560,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975;MONDO:0008608,luna,AD_DS,Human_Visium,age rule: bare number read as years,adult,63,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412945,,,train,sda-all,samples/GSE233208/GSM7412945,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412946,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,2747,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,,luna,Control,Human_Visium,age rule: bare number read as years,aged,73,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412946,,,train,sda-all,samples/GSE233208/GSM7412946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412947,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,3473,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,earlyAD,Human_Visium,age rule: bare number read as years,aged,90,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412947,,,train,sda-all,samples/GSE233208/GSM7412947,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412948,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,3543,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,AD,Human_Visium,age rule: bare number read as years,aged,90,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412948,,,train,sda-all,samples/GSE233208/GSM7412948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412949,brain,disease,Alzheimer disease;Down syndrome,prefrontal cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,False,,2826,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975;MONDO:0008608,luna,AD_DS,Human_Visium,age rule: bare number read as years,adult,58,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412949,,,train,sda-all,samples/GSE233208/GSM7412949,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412950,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,False,,3283,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,,luna,Control,Human_Visium,age rule: bare number read as years,adult,64,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412950,,,train,sda-all,samples/GSE233208/GSM7412950,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7412951,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,2519,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,earlyAD,Human_Visium,age rule: bare number read as years,aged,87,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412951,,,train,sda-all,samples/GSE233208/GSM7412951,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412952,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,1550,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,AD,Human_Visium,age rule: bare number read as years,aged,89,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412952,,,train,sda-all,samples/GSE233208/GSM7412952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412953,brain,disease,Alzheimer disease;Down syndrome,prefrontal cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,False,,3150,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975;MONDO:0008608,luna,AD_DS,Human_Visium,age rule: bare number read as years,adult,57,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412953,,,train,sda-all,samples/GSE233208/GSM7412953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412954,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,3851,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,,luna,Control,Human_Visium,age rule: bare number read as years,aged,70,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412954,,,train,sda-all,samples/GSE233208/GSM7412954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412955,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,2820,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,earlyAD,Human_Visium,age rule: bare number read as years,aged,90,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412955,,,train,sda-all,samples/GSE233208/GSM7412955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412956,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,2826,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,AD,Human_Visium,age rule: bare number read as years,aged,90,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412956,,,train,sda-all,samples/GSE233208/GSM7412956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412957,brain,disease,Alzheimer disease;Down syndrome;syndromic disease,prefrontal cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,False,,3342,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975;MONDO:0008608;MONDO:0002254,luna,AD_DS,Human_Visium,age rule: bare number read as years,adult,62,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412957,,,train,sda-all,samples/GSE233208/GSM7412957,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412959,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,2582,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,earlyAD,Human_Visium,age rule: bare number read as years,aged,90,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412959,,,train,sda-all,samples/GSE233208/GSM7412959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412960,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,2621,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,AD,Human_Visium,age rule: bare number read as years,aged,90,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412960,,,train,sda-all,samples/GSE233208/GSM7412960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412961,brain,disease,Alzheimer disease;Down syndrome,prefrontal cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,False,,3124,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975;MONDO:0008608,luna,AD_DS,Human_Visium,age rule: bare number read as years,adult,56,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412961,,,train,sda-all,samples/GSE233208/GSM7412961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412962,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,2432,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,,luna,Control,Human_Visium,age rule: bare number read as years,aged,90,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412962,,,train,sda-all,samples/GSE233208/GSM7412962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412963,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,2248,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,earlyAD,Human_Visium,age rule: bare number read as years,aged,79,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412963,,,train,sda-all,samples/GSE233208/GSM7412963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412964,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,2731,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,AD,Human_Visium,age rule: bare number read as years,aged,80,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412964,,,train,sda-all,samples/GSE233208/GSM7412964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412965,brain,disease,Alzheimer disease;Down syndrome,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,2775,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975;MONDO:0008608,luna,AD_DS,Human_Visium,age rule: bare number read as years,aged,66,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412965,,,train,sda-all,samples/GSE233208/GSM7412965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412966,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,3518,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,,luna,Control,Human_Visium,age rule: bare number read as years,aged,90,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412966,,,train,sda-all,samples/GSE233208/GSM7412966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412967,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,4317,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,earlyAD,Human_Visium,age rule: bare number read as years,aged,87,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412967,,,train,sda-all,samples/GSE233208/GSM7412967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412968,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,2573,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,AD,Human_Visium,age rule: bare number read as years,aged,90,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412968,,,train,sda-all,samples/GSE233208/GSM7412968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412969,brain,disease,Alzheimer disease;Down syndrome,prefrontal cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,False,,3127,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975;MONDO:0008608,luna,AD_DS,Human_Visium,age rule: bare number read as years,adult,56,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412969,,,train,sda-all,samples/GSE233208/GSM7412969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412970,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,False,,2561,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,,luna,Control,Human_Visium,age rule: bare number read as years,aged,79,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412970,,,train,sda-all,samples/GSE233208/GSM7412970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412971,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,3666,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,earlyAD,Human_Visium,age rule: bare number read as years,aged,90,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412971,,,train,sda-all,samples/GSE233208/GSM7412971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412972,brain,disease,Alzheimer disease,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,2500,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975,luna,AD,Human_Visium,age rule: bare number read as years,aged,90,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412972,,,train,sda-all,samples/GSE233208/GSM7412972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7412973,brain,disease,Alzheimer disease;Down syndrome,prefrontal cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,False,,2975,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,MONDO:0004975;MONDO:0008608,luna,AD_DS,Human_Visium,age rule: bare number read as years,adult,55,extracted field,F,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412973,,,train,sda-all,samples/GSE233208/GSM7412973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7412974,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,False,,3667,Single-nucleus RNA-Seq and spatial transcriptomics characterization of Alzheimer’s Disease and Down Syndrome,GSE233208,GSE233208,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Prefrontal Cortex,,luna,Control,Human_Visium,age rule: bare number read as years,aged,83,extracted field,M,,,fresh frozen,fresh frozen,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39578645,,GSM7412974,,,train,sda-all,samples/GSE233208/GSM7412974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7413167,other,normal,,sympathetic ganglion,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,4988,spatial RNA-seq of SCG,GSE233223,GSE233223,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001806,Sympathetic ganglion,,luna,,wildtype,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,merfish,,,cell,180,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,UNSURE,,,37471539,,GSM7413167,,,train,sda-all,samples/GSE233223/GSM7413167,sda-tissue-disease-2.3,"{""organ"": 0.53, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7422460,pancreas,disease,mucinous neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1692,Spatial Transcriptomics of Intraductal Papillary Mucinous Neoplasms of The Pancreas Identifies NKX6-2 Expression as a Driver of Gastric Differentiation and Indolent Biological Potential,GSE233254,GSE233254,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0024338,luna,intraductal papillary mucinous neoplasm,0.0060% doxycycline diet,age rule: age with unit,adult,23 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.187761144396365,platform_constant,4.187761144396365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7422460,,,test,hesrt,samples/GSE233254/GSM7422460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7422461,pancreas,disease,mucinous neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2942,Spatial Transcriptomics of Intraductal Papillary Mucinous Neoplasms of The Pancreas Identifies NKX6-2 Expression as a Driver of Gastric Differentiation and Indolent Biological Potential,GSE233254,GSE233254,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0024338,luna,intraductal papillary mucinous neoplasm,0.0060% doxycycline diet,age rule: age with unit,adult,33 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.203883565377045,platform_constant,4.203883565377045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7422461,,,test,hesrt,samples/GSE233254/GSM7422461,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421780,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,782,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Low grade IPMN,MONDO:0004286,luna,,,age rule: bare number read as years,aged,75,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.19313533330282,platform_constant,4.19313533330282,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421780,,,train,hesrt,samples/GSE233293/GSM7421780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421781,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1371,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Low grade IPMN,MONDO:0004286,luna,,,age rule: bare number read as years,aged,76,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.18360772464865,platform_constant,4.18360772464865,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421781,,,train,hesrt,samples/GSE233293/GSM7421781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421782,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,778,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Low grade IPMN,MONDO:0004286,luna,,,age rule: bare number read as years,adult,56,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.174324288905167,platform_constant,4.174324288905167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421782,,,train,hesrt,samples/GSE233293/GSM7421782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421783,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,839,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Low grade IPMN,MONDO:0004286,luna,,,age rule: bare number read as years,aged,67,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.216027962024012,platform_constant,4.216027962024012,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421783,,,train,hesrt,samples/GSE233293/GSM7421783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7421784,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,700,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Low grade IPMN,MONDO:0004286,luna,,,age rule: bare number read as years,aged,76,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.001315943184254,platform_constant,4.001315943184254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421784,,,train,hesrt,samples/GSE233293/GSM7421784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421785,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,885,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Low grade IPMN,MONDO:0004286,luna,,,age rule: bare number read as years,adult,51,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.090789241940999,platform_constant,4.090789241940999,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421785,,,train,hesrt,samples/GSE233293/GSM7421785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421786,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,862,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Low grade IPMN,MONDO:0004286,luna,,,age rule: bare number read as years,aged,76,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0539473037606,platform_constant,4.0539473037606,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421786,,,train,hesrt,samples/GSE233293/GSM7421786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421787,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1002,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,High grade IPMN,MONDO:0004286,luna,,,age rule: bare number read as years,aged,72,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.17163918126101,platform_constant,4.17163918126101,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421787,,,train,hesrt,samples/GSE233293/GSM7421787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421788,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,475,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,High grade IPMN,MONDO:0004286,luna,,,age rule: bare number read as years,aged,89,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.155516774579838,platform_constant,4.155516774579838,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421788,,,train,hesrt,samples/GSE233293/GSM7421788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421789,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,992,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,High grade IPMN,MONDO:0004286,luna,,,age rule: bare number read as years,adult,62,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.080279565730672,platform_constant,4.080279565730672,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421789,,,train,hesrt,samples/GSE233293/GSM7421789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421790,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm;pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1684,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,High grade IPMN with co-ocurring PDAC,MONDO:0004286;MONDO:0005184,luna,,,age rule: bare number read as years,aged,76,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.340307045195805,platform_constant,4.340307045195805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421790,,,train,hesrt,samples/GSE233293/GSM7421790,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421791,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm;pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,879,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,High grade IPMN with co-ocurring PDAC,MONDO:0004286;MONDO:0005184,luna,,,age rule: bare number read as years,aged,85,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.226834874600234,platform_constant,4.226834874600234,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421791,,,train,hesrt,samples/GSE233293/GSM7421791,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7421792,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm;pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,996,Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas,GSE233293,GSE233293,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,High grade IPMN with co-ocurring PDAC,MONDO:0004286;MONDO:0005184,luna,,,age rule: bare number read as years,aged,66,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.128646344255141,platform_constant,4.128646344255141,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37285225,,GSM7421792,,,train,hesrt,samples/GSE233293/GSM7421792,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7429786,kidney,normal,,left kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2616,Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys,GSE233513,GSE233513,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0004538,kidney,,luna,,Normal ctrl,age rule: age with unit,juvenile,7–8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.950863915094553,platform_constant,3.950863915094553,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38017015,,GSM7429786,,,val,hesrt,samples/GSE233513/GSM7429786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7429787,kidney,normal,,left kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2682,Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys,GSE233513,GSE233513,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0004538,kidney,,luna,,Normal ctrl,age rule: age with unit,juvenile,7–8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.947906321308024,platform_constant,3.947906321308024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38017015,,GSM7429787,,,val,hesrt,samples/GSE233513/GSM7429787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7429788,kidney,perturbation,,left kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2401,Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys,GSE233513,GSE233513,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0004538,kidney,,luna,,Ischemic reperfusion injury,age rule: age with unit,juvenile,7–8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.972603057182472,platform_constant,3.972603057182472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38017015,,GSM7429788,,,val,hesrt,samples/GSE233513/GSM7429788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7429789,kidney,disease,,left kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2613,Single cell and spatial transcriptomics analysis of kidney double negative T lymphocytes in normal and ischemic mouse kidneys,GSE233513,GSE233513,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0004538,kidney,,luna,,Ischemic reperfusion injury,age rule: age with unit,juvenile,7–8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.026213851097409,platform_constant,4.026213851097409,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38017015,,GSM7429789,,,val,hesrt,samples/GSE233513/GSM7429789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.97, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7430670,brain,perturbation,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,322,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Fluoxetine,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430670,,,train,sda-all,samples/GSE233571/GSM7430670,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7430671,brain,perturbation,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,205,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Maltodextrin,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430671,,,train,sda-all,samples/GSE233571/GSM7430671,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7430672,brain,perturbation,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,198,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Probiotics,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430672,,,train,sda-all,samples/GSE233571/GSM7430672,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM7430673,brain,normal,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,361,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Sham,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430673,,,train,sda-all,samples/GSE233571/GSM7430673,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM7430675,brain,perturbation,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,241,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Maltodextrin,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430675,,,train,sda-all,samples/GSE233571/GSM7430675,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7430676,brain,perturbation,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,208,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Probiotics,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430676,,,train,sda-all,samples/GSE233571/GSM7430676,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7430677,brain,normal,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,359,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Sham,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430677,,,train,sda-all,samples/GSE233571/GSM7430677,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7430678,brain,perturbation,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,157,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Fluoxetine,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430678,,,train,sda-all,samples/GSE233571/GSM7430678,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM7430679,brain,perturbation,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,317,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Probiotics,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430679,,,train,sda-all,samples/GSE233571/GSM7430679,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7430680,brain,normal,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,337,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Sham,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430680,,,train,sda-all,samples/GSE233571/GSM7430680,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7430681,brain,perturbation,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,339,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Fluoxetine,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430681,,,train,sda-all,samples/GSE233571/GSM7430681,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM7430682,brain,perturbation,,limbic cortex,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,376,Shared and unique transcriptomic signatures of antidepressant and probiotics action in the mammalian brain,GSE233571,GSE233571,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0016542,"Pre- and infra- limbic cortex (PLC, ILC)",,luna,,Probiotics,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32623,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM7430682,,,train,sda-all,samples/GSE233571/GSM7430682,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7441442,eye,normal,,eye,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,447,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,8PCW,age rule: post-conception / gestational weeks,embryonic,8 post-conception weeks,not stated,,GSE234035:15817,15817,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104501006,platform_constant,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441442,,,test,hesrt,samples/GSE234035/GSM7441442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441443,eye,normal,,eye,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,450,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,8PCW,age rule: post-conception / gestational weeks,embryonic,8 post-conception weeks,not stated,,GSE234035:15817,15817,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.667126879902728,platform_constant,4.667126879902728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441443,,,test,hesrt,samples/GSE234035/GSM7441443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM7441444,eye,normal,,eye,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,389,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,8PCW,age rule: post-conception / gestational weeks,embryonic,8 post-conception weeks,not stated,,GSE234035:15817,15817,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.644008985451028,platform_constant,4.644008985451028,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441444,,,test,hesrt,samples/GSE234035/GSM7441444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.64, ""life_stage"": 0.93}",,
GSM7441445,eye,normal,,eye,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,504,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,8PCW,age rule: post-conception / gestational weeks,embryonic,8 post-conception weeks,not stated,,GSE234035:15817,15817,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.667126879902728,platform_constant,4.667126879902728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441445,,,test,hesrt,samples/GSE234035/GSM7441445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441446,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1181,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,10PCW,age rule: post-conception / gestational weeks,fetal,10 post-conception weeks,not stated,,GSE234035:15870,15870,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.392251995818518,platform_constant,4.392251995818518,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441446,,,test,hesrt,samples/GSE234035/GSM7441446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441447,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1222,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,10PCW,age rule: post-conception / gestational weeks,fetal,10 post-conception weeks,not stated,,GSE234035:15870,15870,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.392251995818496,platform_constant,4.392251995818496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441447,,,test,hesrt,samples/GSE234035/GSM7441447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441448,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1212,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,10PCW,age rule: post-conception / gestational weeks,fetal,10 post-conception weeks,not stated,,GSE234035:15870,15870,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.392251995818518,platform_constant,4.392251995818518,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441448,,,test,hesrt,samples/GSE234035/GSM7441448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441449,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1188,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,10PCW,age rule: post-conception / gestational weeks,fetal,10 post-conception weeks,not stated,,GSE234035:15870,15870,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.392251995818495,platform_constant,4.392251995818495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441449,,,test,hesrt,samples/GSE234035/GSM7441449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441450,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1154,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,11PCW,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,not stated,,GSE234035:15685,15685,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.4008075453332856,platform_constant,4.4008075453332856,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441450,,,test,hesrt,samples/GSE234035/GSM7441450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441451,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1181,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,11PCW,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,not stated,,GSE234035:15685,15685,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.415178572954832,platform_constant,4.415178572954832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441451,,,test,hesrt,samples/GSE234035/GSM7441451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441452,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,976,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,11PCW,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,not stated,,GSE234035:15685,15685,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.415178572954832,platform_constant,4.415178572954832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441452,,,test,hesrt,samples/GSE234035/GSM7441452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441453,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1060,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,11PCW,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,not stated,,GSE234035:15685,15685,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.415178572954832,platform_constant,4.415178572954832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441453,,,test,hesrt,samples/GSE234035/GSM7441453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441454,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1124,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,13PCW,age rule: post-conception / gestational weeks,fetal,13 post-conception weeks,not stated,,GSE234035:14749,14749,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104500985,platform_constant,4.645410104500985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441454,,,test,hesrt,samples/GSE234035/GSM7441454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM7441455,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1183,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,13PCW,age rule: post-conception / gestational weeks,fetal,13 post-conception weeks,not stated,,GSE234035:14749,14749,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.668111309690189,platform_constant,4.668111309690189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441455,,,test,hesrt,samples/GSE234035/GSM7441455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441456,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1153,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,13PCW,age rule: post-conception / gestational weeks,fetal,13 post-conception weeks,not stated,,GSE234035:14749,14749,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104500985,platform_constant,4.645410104500985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441456,,,test,hesrt,samples/GSE234035/GSM7441456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7441457,eye,normal,,eye,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1295,Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial],GSE234035,GSE234035+GSE234971,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,Eye,,luna,,13PCW,age rule: post-conception / gestational weeks,fetal,13 post-conception weeks,not stated,,GSE234035:14749,14749,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.668111309690189,platform_constant,4.668111309690189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38670973,,GSM7441457,,,test,hesrt,samples/GSE234035/GSM7441457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7449985,unknown,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2733,Intratumoral radiation dose heterogeneity augments antitumor immunity in mice and primes responses to checkpoint blockade,GSE234157,GSE234157+GSE234161,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,solid tumor,MONDO:0005070,luna,,Brachytherapy+Immune checkpoint inhibitors,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,4.6492808202079905,platform_constant,4.6492808202079905,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39292804,,GSM7449985,,,train,hesrt,samples/GSE234157/GSM7449985,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.96, ""disease_status"": 0.88, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7454042,lung,disease,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1254,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,GSE234199,GSE234199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Fibrotic lung slice,,luna,lung fibrosis,bleomycin,age rule: age with unit,juvenile,7 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.0237701493718285,platform_constant,4.0237701493718285,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454042,,,val,hesrt,samples/GSE234199/GSM7454042,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454043,lung,disease,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1303,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,GSE234199,GSE234199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Fibrotic lung slice,,luna,lung fibrosis,bleomycin,age rule: age with unit,juvenile,7 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2109221157721555,platform_constant,4.2109221157721555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454043,,,val,hesrt,samples/GSE234199/GSM7454043,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454044,lung,disease,,lung,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2400,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,GSE234199,GSE234199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Fibrotic lung slice,,luna,lung fibrosis,bleomycin,age rule: age with unit,aged,18 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.113747197356425,platform_constant,4.113747197356425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454044,,,val,hesrt,samples/GSE234199/GSM7454044,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454045,lung,disease,,lung,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,1734,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,GSE234199,GSE234199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Fibrotic lung slice,,luna,lung fibrosis,bleomycin,age rule: age with unit,aged,18 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.04896354734937,platform_constant,4.04896354734937,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454045,,,val,hesrt,samples/GSE234199/GSM7454045,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454046,lung,disease,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2135,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,GSE234199,GSE234199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Fibrotic lung slice,,luna,lung fibrosis,bleomycin,age rule: age with unit,juvenile,7 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.055555596111121,platform_constant,4.055555596111121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454046,,,val,hesrt,samples/GSE234199/GSM7454046,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454047,lung,disease,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1134,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,GSE234199,GSE234199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Fibrotic lung slice,,luna,lung fibrosis,bleomycin,age rule: age with unit,juvenile,7 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.111111115222232,platform_constant,4.111111115222232,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454047,,,val,hesrt,samples/GSE234199/GSM7454047,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454048,lung,disease,,lung,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2383,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,GSE234199,GSE234199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Fibrotic lung slice,,luna,lung fibrosis,bleomycin,age rule: age with unit,aged,18 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.129629751866685,platform_constant,4.129629751866685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454048,,,val,hesrt,samples/GSE234199/GSM7454048,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7454049,lung,disease,,lung,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,1449,Lung injury shifts pulmonary capillary endothelial cells towards regeneration-associated Lrg1+ subpopulations with delayed dynamics in aged mice,GSE234199,GSE234199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Fibrotic lung slice,,luna,lung fibrosis,bleomycin,age rule: age with unit,aged,18 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.1851851483555755,platform_constant,4.1851851483555755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40769983,,GSM7454049,,,val,hesrt,samples/GSE234199/GSM7454049,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7458245,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,43892,Spatial transcriptomics of mouse spleens during malaria convalescence.,GSE234253,GSE234253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,MONDO:0005136,mondo_predicate,,,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,25412,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38944658,,GSM7458245,,,train,sda-all,samples/GSE234253/GSM7458245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.58}",disease_status;life_stage,low_confidence_annotation
GSM7458246,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,45130,Spatial transcriptomics of mouse spleens during malaria convalescence.,GSE234253,GSE234253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,MONDO:0005136,luna,,,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,26397,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38944658,,GSM7458246,,,train,sda-all,samples/GSE234253/GSM7458246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM7458247,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,51589,Spatial transcriptomics of mouse spleens during malaria convalescence.,GSE234253,GSE234253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,MONDO:0005136,mondo_predicate,,,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,27553,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38944658,,GSM7458247,,,train,sda-all,samples/GSE234253/GSM7458247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",disease_status,low_confidence_annotation
GSM7458248,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,45403,Spatial transcriptomics of mouse spleens during malaria convalescence.,GSE234253,GSE234253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,MONDO:0005136,mondo_predicate,,,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,25856,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38944658,,GSM7458248,,,train,sda-all,samples/GSE234253/GSM7458248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM7461403,skin,disease,cancer,zone of skin,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1426,Pharmacological targeting Netrin-1 inhibits EMT in cancer [Visium],GSE234266,GSE234266,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0004992,luna,skin squamous cell carcinoma,Control N/A,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.9828948272737175,platform_constant,3.9828948272737175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532929,,GSM7461403,,,train,hesrt,samples/GSE234266/GSM7461403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.79, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7461404,skin,disease,cancer,zone of skin,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1166,Pharmacological targeting Netrin-1 inhibits EMT in cancer [Visium],GSE234266,GSE234266,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0004992,luna,skin squamous cell carcinoma,NP137 In vivo IP,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.9103893304057444,platform_constant,3.9103893304057444,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37532929,,GSM7461404,,,train,hesrt,samples/GSE234266/GSM7461404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7461435,skin,disease,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,664,Novel integrated multiomics analysis reveals Itgbl1-mediated regulation of fibrogenesis through antagonism of Tgfβ1 and IL1β signaling. (Spatial Gene Expression),GSE234271,GSE234271+GSE234272,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,wound,3 day,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.797367889857136,platform_constant,4.797367889857136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39558136,,GSM7461435,,,train,hesrt,samples/GSE234271/GSM7461435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7461436,skin,disease,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,549,Novel integrated multiomics analysis reveals Itgbl1-mediated regulation of fibrogenesis through antagonism of Tgfβ1 and IL1β signaling. (Spatial Gene Expression),GSE234271,GSE234271+GSE234272,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,wound,7 day,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.363099562562214,platform_constant,4.363099562562214,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39558136,,GSM7461436,,,train,hesrt,samples/GSE234271/GSM7461436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM7461437,skin,disease,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,697,Novel integrated multiomics analysis reveals Itgbl1-mediated regulation of fibrogenesis through antagonism of Tgfβ1 and IL1β signaling. (Spatial Gene Expression),GSE234271,GSE234271+GSE234272,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,wound,14 day,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.365048199829281,platform_constant,4.365048199829281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39558136,,GSM7461437,,,train,hesrt,samples/GSE234271/GSM7461437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.55, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7473682,colon,normal,,sigmoid colon,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,42636,IBD CosMx NanoString data from colonic mucosa,GSE234713,GSE234713,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001159,colon,,luna,healthy (non-IBD),,age rule: bare number read as years,adult,59,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,999,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473682,,,train,sda-all,samples/GSE234713/GSM7473682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473683,colon,normal,,descending colon,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,54818,IBD CosMx NanoString data from colonic mucosa,GSE234713,GSE234713,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,colon,,luna,healthy (non-IBD),,age rule: bare number read as years,adult,61,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,999,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473683,,,train,sda-all,samples/GSE234713/GSM7473683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473684,colon,normal,,sigmoid colon,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,31340,IBD CosMx NanoString data from colonic mucosa,GSE234713,GSE234713,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001159,colon,,luna,healthy (non-IBD),,age rule: bare number read as years,aged,69,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,999,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473684,,,train,sda-all,samples/GSE234713/GSM7473684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473685,colon,disease,ulcerative colitis,transverse colon,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,50757,IBD CosMx NanoString data from colonic mucosa,GSE234713,GSE234713,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001157,colon,MONDO:0005101,luna,ulcerative colitis (UC),,age rule: bare number read as years,aged,69,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,999,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473685,,,train,sda-all,samples/GSE234713/GSM7473685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473686,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,78115,IBD CosMx NanoString data from colonic mucosa,GSE234713,GSE234713,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001159,colon,MONDO:0005101,luna,ulcerative colitis (UC),,age rule: bare number read as years,adult,44,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,999,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473686,,,train,sda-all,samples/GSE234713/GSM7473686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473687,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,57436,IBD CosMx NanoString data from colonic mucosa,GSE234713,GSE234713,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001159,colon,MONDO:0005101,luna,ulcerative colitis (UC),,age rule: bare number read as years,adult,40,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,999,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473687,,,train,sda-all,samples/GSE234713/GSM7473687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7473688,colon,disease,Crohn disease,sigmoid colon,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,38779,IBD CosMx NanoString data from colonic mucosa,GSE234713,GSE234713,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001159,colon,MONDO:0005011,luna,Crohn's disease (CD),,age rule: bare number read as years,adult,45,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,999,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473688,,,train,sda-all,samples/GSE234713/GSM7473688,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7473689,colon,disease,Crohn disease,transverse colon,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,72837,IBD CosMx NanoString data from colonic mucosa,GSE234713,GSE234713,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001157,colon,MONDO:0005011,luna,Crohn's disease (CD),,age rule: bare number read as years,adult,42,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,999,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473689,,,train,sda-all,samples/GSE234713/GSM7473689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7473690,colon,disease,Crohn disease,transverse colon,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,55559,IBD CosMx NanoString data from colonic mucosa,GSE234713,GSE234713,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001157,colon,MONDO:0005011,luna,Crohn's disease (CD),,age rule: bare number read as years,adult,38,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,999,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,37495570,,GSM7473690,,,train,sda-all,samples/GSE234713/GSM7473690,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7474504,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2038,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.283103486331238,platform_constant,4.283103486331238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474504,,,train,hesrt,samples/GSE234774/GSM7474504,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474505,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1530,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.152413990093969,platform_constant,4.152413990093969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474505,,,train,hesrt,samples/GSE234774/GSM7474505,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474506,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1155,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.2396552015614315,platform_constant,4.2396552015614315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474506,,,train,hesrt,samples/GSE234774/GSM7474506,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.97, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474507,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,740,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.3475859773440115,platform_constant,4.3475859773440115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474507,,,train,hesrt,samples/GSE234774/GSM7474507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM7474508,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3138,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.258965729763772,platform_constant,4.258965729763772,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474508,,,train,hesrt,samples/GSE234774/GSM7474508,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7474509,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1689,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.3337930859397575,platform_constant,4.3337930859397575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474509,,,train,hesrt,samples/GSE234774/GSM7474509,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7474510,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2629,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.314827663852226,platform_constant,4.314827663852226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474510,,,train,hesrt,samples/GSE234774/GSM7474510,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474511,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2603,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,mondo_predicate (Luna: perturbation),,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.240000046809596,platform_constant,4.240000046809596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474511,,,train,hesrt,samples/GSE234774/GSM7474511,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474512,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3242,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.389310163417395,platform_constant,4.389310163417395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474512,,,train,hesrt,samples/GSE234774/GSM7474512,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7474513,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3364,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.277931210177389,platform_constant,4.277931210177389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474513,,,train,hesrt,samples/GSE234774/GSM7474513,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7474514,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3076,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.297241196290849,platform_constant,4.297241196290849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474514,,,train,hesrt,samples/GSE234774/GSM7474514,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM7474515,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2793,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.523448441691688,platform_constant,4.523448441691688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474515,,,train,hesrt,samples/GSE234774/GSM7474515,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM7474516,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2502,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.326896559079872,platform_constant,4.326896559079872,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474516,,,train,hesrt,samples/GSE234774/GSM7474516,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM7474517,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2156,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.180689876330917,platform_constant,4.180689876330917,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474517,,,train,hesrt,samples/GSE234774/GSM7474517,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM7474518,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2464,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.1996550445342935,platform_constant,4.1996550445342935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474518,,,train,hesrt,samples/GSE234774/GSM7474518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM7474519,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2439,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26136,counts,pixel,4.309310323776608,platform_constant,4.309310323776608,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474519,,,train,hesrt,samples/GSE234774/GSM7474519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7474520,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2592,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25966,counts,pixel,4.40034508562244,platform_constant,4.40034508562244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474520,,,train,hesrt,samples/GSE234774/GSM7474520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7474521,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2520,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25966,counts,pixel,4.234137757688882,platform_constant,4.234137757688882,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474521,,,train,hesrt,samples/GSE234774/GSM7474521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7474522,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2275,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25966,counts,pixel,4.40034508562244,platform_constant,4.40034508562244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474522,,,train,hesrt,samples/GSE234774/GSM7474522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7474523,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2433,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25966,counts,pixel,4.454137756788609,platform_constant,4.454137756788609,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474523,,,train,hesrt,samples/GSE234774/GSM7474523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM7474524,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2638,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25966,counts,pixel,4.344137876124564,platform_constant,4.344137876124564,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474524,,,train,hesrt,samples/GSE234774/GSM7474524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 0.87}",,
GSM7474525,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2856,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25966,counts,pixel,4.290344848780499,platform_constant,4.290344848780499,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474525,,,train,hesrt,samples/GSE234774/GSM7474525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7474526,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3084,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25966,counts,pixel,4.380344929735834,platform_constant,4.380344929735834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474526,,,train,hesrt,samples/GSE234774/GSM7474526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7474527,spinal cord,disease,spinal cord injury,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3068,The Tabulae Paralytica: Multimodal single-cell and spatial atlases of spinal cord injury,GSE234774,GSE234774,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0003038,spinal cord,MONDO:0043797,luna,,"Mixture of uninjured, 7 days post SCI, 2 months post SCI",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25966,counts,pixel,4.288275752460634,platform_constant,4.288275752460634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38898272;38907165,,GSM7474527,,,train,hesrt,samples/GSE234774/GSM7474527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM7476184,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3343,Sorafenib inhibits invasion of multicellular organoids that mimic Lymphangioleiomyomatosis nodules.,GSE234885,GSE234885,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung Distal Tissue,MONDO:0011705,luna,LAM Patient,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.740261723490048,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40776927,,GSM7476184,,,train,sda-all,samples/GSE234885/GSM7476184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7476185,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2595,Sorafenib inhibits invasion of multicellular organoids that mimic Lymphangioleiomyomatosis nodules.,GSE234885,GSE234885,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung Distal Tissue,MONDO:0011705,luna,LAM Patient,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.564699907501211,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40776927,,GSM7476185,,,train,sda-all,samples/GSE234885/GSM7476185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7497629,pancreas,disease,acute pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,1470,Aging- and Alcohol-Associated Spatial Transcriptomic Signature in Mouse Acute Pancreatitis,GSE235247,GSE235247,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0006515,luna,Acute Pancreatitis,Alcohol and cerulein induced Acute Pancreatitis,age rule: age with unit,aged,18 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.466862545844247,platform_constant,4.466862545844247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38940937,,GSM7497629,,,test,hesrt,samples/GSE235247/GSM7497629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7497630,pancreas,disease,acute pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2096,Aging- and Alcohol-Associated Spatial Transcriptomic Signature in Mouse Acute Pancreatitis,GSE235247,GSE235247,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0006515,luna,Acute Pancreatitis,Alcohol and cerulein induced Acute Pancreatitis,age rule: age with unit,aged,18 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.6805898328469775,platform_constant,4.6805898328469775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38940937,,GSM7497630,,,test,hesrt,samples/GSE235247/GSM7497630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7497631,pancreas,disease,acute pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1627,Aging- and Alcohol-Associated Spatial Transcriptomic Signature in Mouse Acute Pancreatitis,GSE235247,GSE235247,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0006515,luna,Acute Pancreatitis,Alcohol and cerulein induced Acute Pancreatitis,age rule: age with unit,juvenile,3 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.4146238721223305,platform_constant,4.4146238721223305,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38940937,,GSM7497631,,,test,hesrt,samples/GSE235247/GSM7497631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM7497632,pancreas,disease,acute pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,768,Aging- and Alcohol-Associated Spatial Transcriptomic Signature in Mouse Acute Pancreatitis,GSE235247,GSE235247,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0006515,luna,Acute Pancreatitis,Alcohol and cerulein induced Acute Pancreatitis,age rule: age with unit,juvenile,3 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.493439879053798,platform_constant,4.493439879053798,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38940937,,GSM7497632,,,test,hesrt,samples/GSE235247/GSM7497632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM7498811,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3947,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],GSE235315,GSE235315+GSE235452,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic cancer tissue,MONDO:0009831,luna,pancreatic cancer,pancreatic cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9267406906117492,platform_constant,3.9267406906117492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498811,,,train,hesrt,samples/GSE235315/GSM7498811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7498812,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2248,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],GSE235315,GSE235315+GSE235452,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic cancer tissue,MONDO:0009831,luna,pancreatic cancer,pancreatic cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.920592149414351,platform_constant,3.920592149414351,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498812,,,train,hesrt,samples/GSE235315/GSM7498812,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7498813,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4373,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],GSE235315,GSE235315+GSE235452,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic cancer tissue,MONDO:0009831,luna,pancreatic cancer,pancreatic cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.919623334357401,platform_constant,3.919623334357401,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498813,,,train,hesrt,samples/GSE235315/GSM7498813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7498814,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4649,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],GSE235315,GSE235315+GSE235452,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic cancer tissue,MONDO:0009831,luna,pancreatic cancer,pancreatic cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.8947156030376986,platform_constant,3.8947156030376986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498814,,,train,hesrt,samples/GSE235315/GSM7498814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7498815,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3168,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],GSE235315,GSE235315+GSE235452,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic cancer tissue,MONDO:0009831,luna,pancreatic cancer,pancreatic cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9205175318703147,platform_constant,3.9205175318703147,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498815,,,train,hesrt,samples/GSE235315/GSM7498815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7498816,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3582,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],GSE235315,GSE235315+GSE235452,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic cancer tissue,MONDO:0009831,luna,pancreatic cancer,pancreatic cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.918178254479015,platform_constant,3.918178254479015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498816,,,train,hesrt,samples/GSE235315/GSM7498816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7498817,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3468,Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial],GSE235315,GSE235315+GSE235452,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic cancer tissue,MONDO:0009831,luna,pancreatic cancer,pancreatic cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.941995014479929,platform_constant,3.941995014479929,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38297291,,GSM7498817,,,train,hesrt,samples/GSE235315/GSM7498817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7505850,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1077,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D10,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104501006,platform_constant,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505850,,,train,hesrt,samples/GSE235583/GSM7505850,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7505851,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1132,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D10,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.66811130969019,platform_constant,4.66811130969019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505851,,,train,hesrt,samples/GSE235583/GSM7505851,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7505852,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1122,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D10,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104501006,platform_constant,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505852,,,train,hesrt,samples/GSE235583/GSM7505852,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7505853,other,normal,,,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,924,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D10,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.660579892372313,platform_constant,4.660579892372313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505853,,,train,hesrt,samples/GSE235583/GSM7505853,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7505854,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1285,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D150,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.668111309690188,platform_constant,4.668111309690188,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505854,,,train,hesrt,samples/GSE235583/GSM7505854,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7505855,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1362,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D150,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.66811130969019,platform_constant,4.66811130969019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505855,,,train,hesrt,samples/GSE235583/GSM7505855,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7505856,other,normal,,,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1301,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D150,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104501006,platform_constant,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505856,,,train,hesrt,samples/GSE235583/GSM7505856,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7505857,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1323,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D150,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104501006,platform_constant,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505857,,,train,hesrt,samples/GSE235583/GSM7505857,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7505858,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,893,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D20,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.148124603228819,platform_constant,4.148124603228819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505858,,,train,hesrt,samples/GSE235583/GSM7505858,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7505859,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,849,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D20,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.156204623562408,platform_constant,4.156204623562408,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505859,,,train,hesrt,samples/GSE235583/GSM7505859,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7505860,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,871,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D20,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.156204623562408,platform_constant,4.156204623562408,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505860,,,train,hesrt,samples/GSE235583/GSM7505860,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7505861,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,817,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D20,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.176515177818163,platform_constant,4.176515177818163,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505861,,,train,hesrt,samples/GSE235583/GSM7505861,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7505862,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,695,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D35,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104501006,platform_constant,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505862,,,train,hesrt,samples/GSE235583/GSM7505862,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7505863,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,935,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D35,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.668111309690213,platform_constant,4.668111309690213,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505863,,,train,hesrt,samples/GSE235583/GSM7505863,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM7505864,other,normal,,,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,864,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D35,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.637129605341747,platform_constant,4.637129605341747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505864,,,train,hesrt,samples/GSE235583/GSM7505864,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7505865,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,900,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D35,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.6447094393109,platform_constant,4.6447094393109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505865,,,train,hesrt,samples/GSE235583/GSM7505865,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7505866,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1414,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D60,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.158277191918093,platform_constant,5.158277191918093,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505866,,,train,hesrt,samples/GSE235583/GSM7505866,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7505867,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1921,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D60,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.134275027391687,platform_constant,5.134275027391687,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505867,,,train,hesrt,samples/GSE235583/GSM7505867,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM7505868,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1639,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D60,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.134275027391687,platform_constant,5.134275027391687,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505868,,,train,hesrt,samples/GSE235583/GSM7505868,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7505869,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2112,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D60,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.15936521927413,platform_constant,5.15936521927413,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505869,,,train,hesrt,samples/GSE235583/GSM7505869,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7505870,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,882,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D90,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104501006,platform_constant,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505870,,,train,hesrt,samples/GSE235583/GSM7505870,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7505871,other,normal,,,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1185,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D90,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104501006,platform_constant,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505871,,,train,hesrt,samples/GSE235583/GSM7505871,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7505872,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1279,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D90,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.645410104501006,platform_constant,4.645410104501006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505872,,,train,hesrt,samples/GSE235583/GSM7505872,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7505873,eye,normal,,eye,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1088,Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [Spatial Transcriptomics],GSE235583,GSE235583+GSE235585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000970,organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,D90,not stated,,GSE235583:AD3,AD3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.667126879902778,platform_constant,4.667126879902778,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7505873,,,train,hesrt,samples/GSE235583/GSM7505873,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7507311,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2587,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,newly_diagnosed,age rule: age in years,adult,46 years,extracted field,male,GSE235672:Pt1,Pt1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.439743652153069,platform_constant,4.439743652153069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507311,,,train,hesrt,samples/GSE235672/GSM7507311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7507312,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1883,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,Neoadjuvant,age rule: age in years,adult,39 years,extracted field,male,GSE235672:Pt2,Pt2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.439624515576755,platform_constant,4.439624515576755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507312,,,train,hesrt,samples/GSE235672/GSM7507312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507313,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Visium,Visium,True,H&E,1876,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,TMZ+RT,age rule: age in years,juvenile,7 years,extracted field,female,GSE235672:Pt3,Pt3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.439713867109834,platform_constant,4.439713867109834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507313,,,train,hesrt,samples/GSE235672/GSM7507313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507314,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2963,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,newly_diagnosed,age rule: age in years,adult,35 years,extracted field,female,GSE235672:Pt4,Pt4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.441651142699947,platform_constant,4.441651142699947,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507314,,,train,hesrt,samples/GSE235672/GSM7507314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507315,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1858,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,newly_diagnosed,age rule: age in years,adult,38 years,extracted field,female,GSE235672:Pt5,Pt5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.02018583671867,platform_constant,4.02018583671867,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507315,,,train,hesrt,samples/GSE235672/GSM7507315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7507316,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2560,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,"newly_diagnosed, TMZ+RT",age rule: bare number read as years,adult,38,extracted field,female,GSE235672:Pt5_Pt7,Pt5_Pt7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.439624515576755,platform_constant,4.439624515576755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507316,,,train,hesrt,samples/GSE235672/GSM7507316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507317,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2027,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,TMZ+RT,age rule: age in years,adult,51 years,extracted field,male,GSE235672:Pt6,Pt6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.439713867109834,platform_constant,4.439713867109834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507317,,,train,hesrt,samples/GSE235672/GSM7507317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507318,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1555,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,TMZ+RT,age rule: age in years,adult,38 years,extracted field,female,GSE235672:Pt7,Pt7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.020001447488076,platform_constant,4.020001447488076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507318,,,train,hesrt,samples/GSE235672/GSM7507318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507319,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1733,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,TMZ+RT,age rule: age in years,adult,37 years,extracted field,male,GSE235672:Pt8,Pt8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.020185836718651,platform_constant,4.020185836718651,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507319,,,train,hesrt,samples/GSE235672/GSM7507319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7507320,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2253,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,newly_diagnosed,age rule: age in years,adult,56 years,extracted field,male,GSE235672:Pt9,Pt9,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.005304033479119,platform_constant,4.005304033479119,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507320,,,train,hesrt,samples/GSE235672/GSM7507320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7507321,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2176,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,"newly_diagnosed, TMZ+RT",luna,adult,,extracted field,male,GSE235672:Pt9_Pt8,Pt9_Pt8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.439624515576755,platform_constant,4.439624515576755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507321,,,train,hesrt,samples/GSE235672/GSM7507321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507322,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2494,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,newly_diagnosed,age rule: age in years,aged,67 years,extracted field,female,GSE235672:Pt10,Pt10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.439743652153069,platform_constant,4.439743652153069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507322,,,train,hesrt,samples/GSE235672/GSM7507322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507323,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2499,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,Neoadjuvant,age rule: age in years,adult,50 years,extracted field,female,GSE235672:Pt11,Pt11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.439624515576755,platform_constant,4.439624515576755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507323,,,train,hesrt,samples/GSE235672/GSM7507323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7507324,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1887,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,TMZ+RT,age rule: age in years,adult,53 years,extracted field,male,GSE235672:Pt12,Pt12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.439743652153069,platform_constant,4.439743652153069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507324,,,train,hesrt,samples/GSE235672/GSM7507324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507325,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2578,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,newly_diagnosed,age rule: age in years,adult,52 years,extracted field,female,GSE235672:Pt13,Pt13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.441651142699947,platform_constant,4.441651142699947,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507325,,,train,hesrt,samples/GSE235672/GSM7507325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507326,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1948,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,newly_diagnosed,age rule: age in years,aged,71 years,extracted field,male,GSE235672:Pt14,Pt14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.439713867109834,platform_constant,4.439713867109834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507326,,,train,hesrt,samples/GSE235672/GSM7507326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7507327,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2149,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,Neoadjuvant,age rule: age in years,adult,23 years,extracted field,male,GSE235672:Pt15,Pt15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,3.9086965161018665,platform_constant,3.9086965161018665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507327,,,train,hesrt,samples/GSE235672/GSM7507327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507328,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2897,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,Neoadjuvant,age rule: age in years,adult,22 years,extracted field,male,GSE235672:Pt16,Pt16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,3.9575873943809516,platform_constant,3.9575873943809516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507328,,,train,hesrt,samples/GSE235672/GSM7507328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507329,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2320,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,Neoadjuvant,age rule: age in years,adult,45 years,extracted field,male,GSE235672:Pt17,Pt17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,3.9560887495996844,platform_constant,3.9560887495996844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507329,,,train,hesrt,samples/GSE235672/GSM7507329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7507330,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2751,"Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]",GSE235672,GSE235672+GSE235913,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,Neoadjuvant,age rule: age in years,adult,39 years,extracted field,female,GSE235672:Pt18,Pt18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,3.87426118488143,platform_constant,3.87426118488143,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37460871,,GSM7507330,,,train,hesrt,samples/GSE235672/GSM7507330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7508783,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,502,Genetic vulnerability to healing reveals a spatially resolved epithelial restitution program,GSE235743,GSE235743,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,distal colon,,luna,,"Hgfac WT, intact tissues",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37878672,10.1126/scitranslmed.adg5252,GSM7508783,,,train,hesrt,samples/GSE235743/GSM7508783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM7508784,colon,perturbation,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,640,Genetic vulnerability to healing reveals a spatially resolved epithelial restitution program,GSE235743,GSE235743,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,distal colon,,luna,,"Hgfac WT, day2 wounds",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37878672,10.1126/scitranslmed.adg5252,GSM7508784,,,train,hesrt,samples/GSE235743/GSM7508784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7508785,colon,perturbation,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,572,Genetic vulnerability to healing reveals a spatially resolved epithelial restitution program,GSE235743,GSE235743,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,distal colon,,luna,,"Hgfac KO, day2 wounds",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326132,platform_constant,5.492041719326132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37878672,10.1126/scitranslmed.adg5252,GSM7508785,,,train,hesrt,samples/GSE235743/GSM7508785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7585149,kidney,disease,,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Other,Decoder-seq,True,H&E,2181,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,renal cancers,,luna,clear cell RCC,leading-edge,luna,not stated,,not stated,,GSE235896:patient 1,patient 1,,,release v3,sequencing-based,Decoder-seq,,,,54368,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585149,,,train,hesrt,samples/GSE235896/GSM7585149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM7585150,kidney,disease,,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Other,Decoder-seq,True,H&E,2134,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,renal cancers,,luna,clear cell RCC,tumor core,luna,not stated,,not stated,,GSE235896:patient 1,patient 1,,,release v3,sequencing-based,Decoder-seq,,,,45209,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585150,,,train,hesrt,samples/GSE235896/GSM7585150,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7585151,kidney,disease,,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Other,Decoder-seq,True,H&E,2246,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,renal cancers,,luna,chromophobe RCC,leading-edge,luna,not stated,,not stated,,GSE235896:patient 1,patient 1,,,release v3,sequencing-based,Decoder-seq,,,,53137,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585151,,,train,hesrt,samples/GSE235896/GSM7585151,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM7585152,kidney,disease,,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Other,Decoder-seq,True,H&E,1815,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,renal cancers,,luna,chromophobe RCC,tumor core,luna,not stated,,not stated,,GSE235896:patient 1,patient 1,,,release v3,sequencing-based,Decoder-seq,,,,44011,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585152,,,train,hesrt,samples/GSE235896/GSM7585152,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM7585153,kidney,disease,,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Other,Decoder-seq,True,H&E,1984,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,renal cancers,,luna,clear cell RCC,leading-edge,luna,not stated,,not stated,,GSE235896:patient 3,patient 3,,,release v3,sequencing-based,Decoder-seq,,,,51084,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585153,,,train,hesrt,samples/GSE235896/GSM7585153,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7585154,kidney,disease,,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Other,Decoder-seq,True,H&E,2091,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,renal cancers,,luna,chromophobe RCC,leading-edge,luna,not stated,,not stated,,GSE235896:patient 2,patient 2,,,release v3,sequencing-based,Decoder-seq,,,,47818,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585154,,,train,hesrt,samples/GSE235896/GSM7585154,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM7585155,kidney,disease,,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Other,Decoder-seq,True,H&E,2217,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,renal cancers,,luna,clear cell RCC,tumor core,luna,not stated,,not stated,,GSE235896:patient 2,patient 2,,,release v3,sequencing-based,Decoder-seq,,,,49243,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585155,,,train,hesrt,samples/GSE235896/GSM7585155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7585156,kidney,disease,,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Other,Decoder-seq,True,H&E,2363,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,renal cancers,,luna,clear cell RCC,leading-edge,luna,not stated,,not stated,,GSE235896:patient 2,patient 2,,,release v3,sequencing-based,Decoder-seq,,,,51102,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585156,,,train,hesrt,samples/GSE235896/GSM7585156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM7585157,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,True,H&E,1465,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,rep2,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,,34240,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585157,,,train,hesrt,samples/GSE235896/GSM7585157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7585158,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,True,H&E,1710,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,rep1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,,26736,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585158,,,train,hesrt,samples/GSE235896/GSM7585158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7585159,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,True,H&E,2450,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002421,mouse hippocampus,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,,33018,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585159,,,train,hesrt,samples/GSE235896/GSM7585159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.75, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7585160,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,True,H&E,750,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,rep1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,,37220,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585160,,,train,hesrt,samples/GSE235896/GSM7585160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7585161,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,True,H&E,659,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,rep2,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,,32403,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7585161,,,train,hesrt,samples/GSE235896/GSM7585161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7585162,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1078,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002264,mouse olfactory bulb,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM7585162,,,train,sda-all,samples/GSE235896/GSM7585162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7585163,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,False,,47363,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,cell,16,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM7585163,,,train,sda-all,samples/GSE235896/GSM7585163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7585164,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,False,,41702,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,cell,16,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM7585164,,,train,sda-all,samples/GSE235896/GSM7585164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7585165,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,False,,45654,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,cell,16,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM7585165,,,train,sda-all,samples/GSE235896/GSM7585165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7585167,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,False,,2500,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,mouse hemibrain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,spot,40162,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM7585167,,,train,sda-all,samples/GSE235896/GSM7585167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7848719,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,True,H&E,1472,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,rep3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,,24509,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7848719,,,train,hesrt,samples/GSE235896/GSM7848719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7848720,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,True,H&E,926,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,rep3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,,43513,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7848720,,,train,hesrt,samples/GSE235896/GSM7848720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7915845,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,True,H&E,761,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,,38917,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7915845,,,train,hesrt,samples/GSE235896/GSM7915845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7915846,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Decoder-seq,True,H&E,771,Decoder-seq enhances mRNA capture efficiency in spatial RNA sequencing,GSE235896,GSE235896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,mouse olfactory bulb,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Decoder-seq,,,,29414,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7915846,,,train,hesrt,samples/GSE235896/GSM7915846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7519181,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2968,Spatiotemporal trajectory analysis and validation of microglia activation in traumatic brain injury,GSE236171,GSE236171,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Naive control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,3.9896117040372823,platform_constant,3.9896117040372823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38007580,,GSM7519181,,,val,hesrt,samples/GSE236171/GSM7519181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7519182,brain,disease,traumatic brain injury,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2442,Spatiotemporal trajectory analysis and validation of microglia activation in traumatic brain injury,GSE236171,GSE236171,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0858950,luna,,TBI 3 dpi,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38007580,,GSM7519182,,,val,hesrt,samples/GSE236171/GSM7519182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7574423,brain,disease,traumatic brain injury,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),True,H&E,813,Spatiotemporal trajectory analysis and validation of microglia activation in traumatic brain injury,GSE236171,GSE236171,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0858950,luna,,TBI 6 hpi,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics (legacy),,,spot,30609,counts,pixel,1.497472527499345,platform_constant,1.497472527499345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38007580,,GSM7574423,,,val,hesrt,samples/GSE236171/GSM7574423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7574424,brain,disease,traumatic brain injury,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),True,H&E,659,Spatiotemporal trajectory analysis and validation of microglia activation in traumatic brain injury,GSE236171,GSE236171,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0858950,luna,,TBI 3 dpi,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics (legacy),,,spot,21425,counts,pixel,4.299484818225461,platform_constant,4.299484818225461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38007580,,GSM7574424,,,val,hesrt,samples/GSE236171/GSM7574424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536059,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1291,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,neonatal or infant,Newborn,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,3.956010059923841,platform_constant,3.956010059923841,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536059,,,train,hesrt,samples/GSE236424/GSM7536059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536060,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1390,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,neonatal or infant,Newborn,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.1196444613298935,platform_constant,4.1196444613298935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536060,,,train,hesrt,samples/GSE236424/GSM7536060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536061,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,970,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,neonatal or infant,Newborn,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.004999578601992,platform_constant,4.004999578601992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536061,,,train,hesrt,samples/GSE236424/GSM7536061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536062,liver,normal,,liver,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1033,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,neonatal or infant,Newborn,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.0214132629789106,platform_constant,4.0214132629789106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536062,,,train,hesrt,samples/GSE236424/GSM7536062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536063,liver,normal,,liver,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,984,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,neonatal or infant,Newborn,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.004999578602001,platform_constant,4.004999578602001,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536063,,,train,hesrt,samples/GSE236424/GSM7536063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536065,liver,normal,,liver,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1250,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,neonatal or infant,Newborn,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.004999578601992,platform_constant,4.004999578601992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536065,,,train,hesrt,samples/GSE236424/GSM7536065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7536066,liver,normal,,liver,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,897,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,neonatal or infant,Newborn,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.004999578602001,platform_constant,4.004999578602001,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536066,,,train,hesrt,samples/GSE236424/GSM7536066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536067,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,1973,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,juvenile,Juvenile,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,3.9930654990883614,platform_constant,3.9930654990883614,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536067,,,train,hesrt,samples/GSE236424/GSM7536067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536068,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2281,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,juvenile,Juvenile,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.048180720832946,platform_constant,4.048180720832946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536068,,,train,hesrt,samples/GSE236424/GSM7536068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536070,liver,normal,,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,1908,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,juvenile,Juvenile,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,3.96381902888524,platform_constant,3.96381902888524,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536070,,,train,hesrt,samples/GSE236424/GSM7536070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536071,liver,normal,,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,1988,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,juvenile,Juvenile,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,3.910303632666984,platform_constant,3.910303632666984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536071,,,train,hesrt,samples/GSE236424/GSM7536071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536072,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,2066,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,juvenile,Juvenile,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.004999578602001,platform_constant,4.004999578602001,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536072,,,train,hesrt,samples/GSE236424/GSM7536072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7536073,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,1258,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,juvenile,Juvenile,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.240475011904763,platform_constant,4.240475011904763,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536073,,,train,hesrt,samples/GSE236424/GSM7536073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7536075,liver,normal,,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,1397,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,juvenile,Juvenile,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.037574659516483,platform_constant,4.037574659516483,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536075,,,train,hesrt,samples/GSE236424/GSM7536075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7536076,liver,normal,,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,1636,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,juvenile,Juvenile,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.10323041374242,platform_constant,4.10323041374242,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536076,,,train,hesrt,samples/GSE236424/GSM7536076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536077,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1168,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.004999578602001,platform_constant,4.004999578602001,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536077,,,train,hesrt,samples/GSE236424/GSM7536077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536078,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1196,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.0214132629789106,platform_constant,4.0214132629789106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536078,,,train,hesrt,samples/GSE236424/GSM7536078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536079,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1170,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.0214132629789106,platform_constant,4.0214132629789106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536079,,,train,hesrt,samples/GSE236424/GSM7536079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536080,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1259,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,LV-transduced,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.037827415129904,platform_constant,4.037827415129904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536080,,,train,hesrt,samples/GSE236424/GSM7536080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536081,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1635,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.034544380791632,platform_constant,4.034544380791632,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536081,,,train,hesrt,samples/GSE236424/GSM7536081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536082,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1338,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.076968251989529,platform_constant,4.076968251989529,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536082,,,train,hesrt,samples/GSE236424/GSM7536082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536084,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1147,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.091109432815779,platform_constant,4.091109432815779,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536084,,,train,hesrt,samples/GSE236424/GSM7536084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7536085,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1532,Spatiotemporal hepatocyte heterogeneity impacts in vivo gene engineering [Visium Spatial Transcriptomics],GSE236424,GSE236424+GSE236425,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Untransduced,luna,adult,Adult,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32287,counts,pixel,4.048685677691475,platform_constant,4.048685677691475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7536085,,,train,hesrt,samples/GSE236424/GSM7536085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7567292,uterus,normal,,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1449,Effect of Aging on the Human Myometrium at Single-Cell Resolution,GSE236660,GSE236660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,,luna,,Postmenopause,luna,not stated,,not stated,,GSE236660:1,1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.098105918095102,platform_constant,4.098105918095102,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567292,,,train,hesrt,samples/GSE236660/GSM7567292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM7567293,uterus,normal,,myometrium,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,3498,Effect of Aging on the Human Myometrium at Single-Cell Resolution,GSE236660,GSE236660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,,luna,,Perimenopause,luna,adult,,not stated,,GSE236660:7,7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.032342740978702,platform_constant,4.032342740978702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567293,,,train,hesrt,samples/GSE236660/GSM7567293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM7567294,uterus,normal,,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2266,Effect of Aging on the Human Myometrium at Single-Cell Resolution,GSE236660,GSE236660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,,luna,,Postmenopause,luna,not stated,,not stated,,GSE236660:13,13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.019847941415007,platform_constant,4.019847941415007,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567294,,,train,hesrt,samples/GSE236660/GSM7567294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM7567295,uterus,normal,,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3333,Effect of Aging on the Human Myometrium at Single-Cell Resolution,GSE236660,GSE236660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,,luna,,Postmenopause,luna,not stated,,not stated,,GSE236660:14,14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.015935041371487,platform_constant,4.015935041371487,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567295,,,train,hesrt,samples/GSE236660/GSM7567295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.63}",,
GSM7567296,uterus,normal,,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2270,Effect of Aging on the Human Myometrium at Single-Cell Resolution,GSE236660,GSE236660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,,luna,,Postmenopause,luna,not stated,,not stated,,GSE236660:15,15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.071585233904576,platform_constant,4.071585233904576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567296,,,train,hesrt,samples/GSE236660/GSM7567296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM7567297,uterus,normal,,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2109,Effect of Aging on the Human Myometrium at Single-Cell Resolution,GSE236660,GSE236660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,,luna,,Perimenopause,luna,not stated,,not stated,,GSE236660:17,17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.03332587668454,platform_constant,4.03332587668454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567297,,,train,hesrt,samples/GSE236660/GSM7567297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM7567298,uterus,normal,,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3555,Effect of Aging on the Human Myometrium at Single-Cell Resolution,GSE236660,GSE236660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,,luna,,Perimenopause,luna,not stated,,not stated,,GSE236660:18,18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9942814538060425,platform_constant,3.9942814538060425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567298,,,train,hesrt,samples/GSE236660/GSM7567298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM7567299,uterus,normal,,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2685,Effect of Aging on the Human Myometrium at Single-Cell Resolution,GSE236660,GSE236660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,,luna,,Postmenopause,luna,not stated,,not stated,,GSE236660:20,20,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0037969866788865,platform_constant,4.0037969866788865,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38296945,,GSM7567299,,,train,hesrt,samples/GSE236660/GSM7567299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM7567492,liver,disease,metastatic neoplasm;breast cancer,liver,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1937,Targeting Metabolic Adaptations in the Breast Cancer–Liver Metastatic Niche Using Dietary Approaches to Improve Endocrine Therapy Efficacy,GSE236681,GSE236681,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0002107,Liver metastatic breast tumor,MONDO:0024883;MONDO:0007254,luna,,NOD scid gamma,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,116124,counts,um,1.0,verified,4.211124347484764,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35259269,,GSM7567492,,,train,sda-all,samples/GSE236681/GSM7567492,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.30000000000000004, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM7567493,liver,disease,metastatic neoplasm;breast cancer,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1287,Targeting Metabolic Adaptations in the Breast Cancer–Liver Metastatic Niche Using Dietary Approaches to Improve Endocrine Therapy Efficacy,GSE236681,GSE236681,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0002107,Liver metastatic breast tumor,MONDO:0024883;MONDO:0007254,luna,,NOD scid gamma,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,116124,counts,um,1.0,verified,4.218801681952232,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35259269,,GSM7567493,,,train,sda-all,samples/GSE236681/GSM7567493,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.36, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",sample_kind,low_confidence_annotation
GSM7567494,liver,disease,metastatic neoplasm;breast cancer,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3522,Targeting Metabolic Adaptations in the Breast Cancer–Liver Metastatic Niche Using Dietary Approaches to Improve Endocrine Therapy Efficacy,GSE236681,GSE236681,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0002107,Liver metastatic breast tumor,MONDO:0024883;MONDO:0007254,luna,,Fulvestrant,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,116124,counts,um,1.0,verified,4.234185084736351,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,35259269,,GSM7567494,,,train,sda-all,samples/GSE236681/GSM7567494,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM7567495,liver,disease,metastatic neoplasm;breast cancer,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3720,Targeting Metabolic Adaptations in the Breast Cancer–Liver Metastatic Niche Using Dietary Approaches to Improve Endocrine Therapy Efficacy,GSE236681,GSE236681,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0002107,Liver metastatic breast tumor,MONDO:0024883;MONDO:0007254,luna,,Fulvestrant,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,116124,counts,um,1.0,verified,4.219225837004199,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain needs to be confirmed,35259269,,GSM7567495,,,train,sda-all,samples/GSE236681/GSM7567495,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.74, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7573205,colon,disease,colorectal adenocarcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3602,Mucinous colorectal adenocarcinoma,GSE236698,GSE236698,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0005008,luna,mucinous colorectal adenocarinoma,tumor + normal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.150120981234191,platform_constant,4.150120981234191,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38778448,,GSM7573205,,,test,hesrt,samples/GSE236698/GSM7573205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8286350,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1725,Mucinous colorectal adenocarcinoma,GSE236698,GSE236698,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,,luna,mucinous colorectal adenocarinoma,normal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.8819090836503287,platform_constant,3.8819090836503287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38778448,,GSM8286350,,,test,hesrt,samples/GSE236698/GSM8286350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,normal_but_disease_text
GSM7580115,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3848,Longitudinal spatial transcriptomics of murine T cell transfer colitis,GSE236890,GSE236890,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0005292,luna,,CD45RBhi transfer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.107762138834163,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM7580115,,,train,sda-all,samples/GSE236890/GSM7580115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7580116,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3749,Longitudinal spatial transcriptomics of murine T cell transfer colitis,GSE236890,GSE236890,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0005292,luna,,CD45RBhi transfer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.097461099224352,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM7580116,,,train,sda-all,samples/GSE236890/GSM7580116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM7580117,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4398,Longitudinal spatial transcriptomics of murine T cell transfer colitis,GSE236890,GSE236890,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0005292,luna,,CD45RBhi transfer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.0968515779971835,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM7580117,,,train,sda-all,samples/GSE236890/GSM7580117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM7580118,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4072,Longitudinal spatial transcriptomics of murine T cell transfer colitis,GSE236890,GSE236890,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0005292,luna,,CD45RBhi transfer + anti-IL12p40,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.108122084813728,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM7580118,,,train,sda-all,samples/GSE236890/GSM7580118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM7589541,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3144,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,naive,age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.37865479493105764,platform_constant,0.5000074689440399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589541,,,train,hesrt,samples/GSE236963/GSM7589541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7589543,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2648,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,naive,age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.3787851613880087,platform_constant,0.5000049586646902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589543,,,train,hesrt,samples/GSE236963/GSM7589543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7589544,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2580,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,naive,age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.3787851613880087,platform_constant,0.49999369382785425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589544,,,train,hesrt,samples/GSE236963/GSM7589544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7589545,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2881,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,naive,age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.37874440740668464,platform_constant,0.49999882543228236,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589545,,,train,hesrt,samples/GSE236963/GSM7589545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7589546,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3024,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,naive,age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.37874440740668464,platform_constant,0.5000078716589326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589546,,,train,hesrt,samples/GSE236963/GSM7589546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7589548,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3070,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.37865479493105764,platform_constant,0.5000010802007053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589548,,,train,hesrt,samples/GSE236963/GSM7589548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7589549,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2477,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.37865479493105764,platform_constant,0.5000010802007053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589549,,,train,hesrt,samples/GSE236963/GSM7589549,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7589550,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2460,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.3787851613880087,platform_constant,0.4999912862309797,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589550,,,train,hesrt,samples/GSE236963/GSM7589550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7589551,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2501,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.37761399409016205,platform_constant,0.5000025402810795,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589551,,,train,hesrt,samples/GSE236963/GSM7589551,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7589553,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2791,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.3787851613880087,platform_constant,0.500000945310501,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589553,,,train,hesrt,samples/GSE236963/GSM7589553,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7589554,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2804,Spatial Transcriptomics of Meningeal Inflammation Reveals Variable Penetrance of Inflammatory Gene Signatures into Adjacent Brain Parenchyma,GSE236963,GSE236963,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,experimental autoimmune encephalomyelitis,Kleptose (vehicle),age rule: age with unit,not stated,7–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.37874440740668464,platform_constant,0.49999246747447823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39475792,,GSM7589554,,,train,hesrt,samples/GSE236963/GSM7589554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7594569,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERSCOPE,False,,226657,Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types [MERFISH],GSE237086,GSE237086,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Mecp2 KO/+,age rule: age with unit,adult,8-10-week,extracted field,Female,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM7594569,,,train,sda-all,samples/GSE237086/GSM7594569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7594570,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERSCOPE,False,,223562,Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types [MERFISH],GSE237086,GSE237086,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Mecp2 KO/+,age rule: age with unit,adult,8-10-week,extracted field,Female,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM7594570,,,train,sda-all,samples/GSE237086/GSM7594570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7594571,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERSCOPE,False,,127853,Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types [MERFISH],GSE237086,GSE237086,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Mecp2 KO/+,age rule: age with unit,adult,8-10-week,extracted field,Female,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM7594571,,,train,sda-all,samples/GSE237086/GSM7594571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7594572,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERSCOPE,False,,113701,Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types [MERFISH],GSE237086,GSE237086,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Mecp2 KO/+,age rule: age with unit,adult,8-10-week,extracted field,Female,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM7594572,,,train,sda-all,samples/GSE237086/GSM7594572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7594573,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,MERFISH/MERSCOPE,MERSCOPE,False,,110542,Non-CG DNA methylation and MeCP2 stabilize repeated tuning of long genes that distinguish closely related neuron types [MERFISH],GSE237086,GSE237086,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,WT,age rule: age with unit,adult,8-10-week,extracted field,Female,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM7594573,,,train,sda-all,samples/GSE237086/GSM7594573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7595667,unknown,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2188,Red blood cells-heme-exposure and tumor-associated macrophage identity,GSE237119,GSE237119,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,,anti-CD40 treated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,15295,counts,pixel,7.1679774239447305,platform_constant,7.1679774239447305,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38060331,,GSM7595667,,,train,hesrt,samples/GSE237119/GSM7595667,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7595668,unknown,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2186,Red blood cells-heme-exposure and tumor-associated macrophage identity,GSE237119,GSE237119,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,,anti-CD40 treated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,13916,counts,pixel,7.295908988485231,platform_constant,7.295908988485231,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38060331,,GSM7595668,,,train,hesrt,samples/GSE237119/GSM7595668,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7596587,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2397,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,unannotated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,16.539701565210255,platform_constant,16.539701565210255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596587,,,test,hesrt,samples/GSE237183/GSM7596587,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596588,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1387,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,infiltrating,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,13.315960839301303,platform_constant,13.315960839301303,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596588,,,test,hesrt,samples/GSE237183/GSM7596588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596589,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2792,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,T1 contrast-enhancing,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,13.409946533937832,platform_constant,13.409946533937832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596589,,,test,hesrt,samples/GSE237183/GSM7596589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596590,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2199,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,bulk,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,15.033867500268697,platform_constant,15.033867500268697,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596590,,,test,hesrt,samples/GSE237183/GSM7596590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596591,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1280,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,infiltrating,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,13.782014446254985,platform_constant,13.782014446254985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596591,,,test,hesrt,samples/GSE237183/GSM7596591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596592,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2780,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,T1 contrast-enhancing,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,13.673494509636729,platform_constant,13.673494509636729,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596592,,,test,hesrt,samples/GSE237183/GSM7596592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596593,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1436,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,infiltrating,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,14.886070747525958,platform_constant,14.886070747525958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596593,,,test,hesrt,samples/GSE237183/GSM7596593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596594,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,955,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,necrotic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,14.97185567923029,platform_constant,14.97185567923029,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596594,,,test,hesrt,samples/GSE237183/GSM7596594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596595,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1726,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,infiltrating,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,14.593005062132269,platform_constant,14.593005062132269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596595,,,test,hesrt,samples/GSE237183/GSM7596595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596596,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1112,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,T1 contrast-enhancing,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,14.598819232040878,platform_constant,14.598819232040878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596596,,,test,hesrt,samples/GSE237183/GSM7596596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596597,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2486,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,1a,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,15.028053663234306,platform_constant,15.028053663234306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596597,,,test,hesrt,samples/GSE237183/GSM7596597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596598,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2595,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,1b,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,15.032898344639849,platform_constant,15.032898344639849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596598,,,test,hesrt,samples/GSE237183/GSM7596598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596599,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2343,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0018177,luna,glioblastoma,2,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,15.029690936060733,platform_constant,15.029690936060733,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,GSM7596599,,,test,hesrt,samples/GSE237183/GSM7596599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596600,brain,disease,oligodendroglioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,965,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0016695,luna,glioblastoma,bwh23,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,14.693002002102968,platform_constant,14.693002002102968,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-05164fc8edb1,cross_gse_redeposit,GSM9902434,test,hesrt,samples/GSE237183/GSM7596600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596601,brain,disease,astrocytoma (excluding glioblastoma);high grade astrocytic tumor,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3105,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0019781;MONDO:0016680,luna,glioblastoma,bwh24,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,14.697675171125592,platform_constant,14.697675171125592,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-f16c46bb5f15,cross_gse_redeposit,GSM9902421,test,hesrt,samples/GSE237183/GSM7596601,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596602,brain,disease,astrocytoma (excluding glioblastoma);high grade astrocytic tumor,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2607,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0019781;MONDO:0016680,luna,glioblastoma,bwh25,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,16.377906290109205,platform_constant,16.377906290109205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-c68a244ffa56,cross_gse_redeposit,GSM9902422,test,hesrt,samples/GSE237183/GSM7596602,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596603,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2637,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0019781,luna,glioblastoma,bwh28,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,14.686992167057598,platform_constant,14.686992167057598,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-9fad8b8c9ac8,cross_gse_redeposit,GSM9902423,test,hesrt,samples/GSE237183/GSM7596603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7596604,brain,disease,oligodendroglioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1300,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0016695,luna,glioblastoma,bwh35,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,16.539701565210287,platform_constant,16.539701565210287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-3b0fa05bbde9,cross_gse_redeposit,GSM9902435,test,hesrt,samples/GSE237183/GSM7596604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7596605,brain,disease,oligodendroglioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3464,Integrative spatial analysis reveals a multi-layered organization of glioblastoma,GSE237183,GSE237183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,human glioblastoma,MONDO:0016695,luna,glioblastoma,mgh259,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,14.866927844536432,platform_constant,14.866927844536432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38653236,,CG-ce0e109a5c67,cross_gse_redeposit,GSM9902437,test,hesrt,samples/GSE237183/GSM7596605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7605371,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,female,Visium,Visium,False,,1577,Three-dimensional molecular architecture of mouse organogenesis,GSE237308,GSE237308,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,embryo,,luna,,,age rule: embryonic day,embryonic,embryonic day 13.5,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37524711,,GSM7605371,,,train,sda-all,samples/GSE237308/GSM7605371,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7605372,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,female,Visium,Visium,False,,1407,Three-dimensional molecular architecture of mouse organogenesis,GSE237308,GSE237308,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,embryo,,luna,,,age rule: embryonic day,embryonic,embryonic day 13.5,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37524711,,GSM7605372,,,train,sda-all,samples/GSE237308/GSM7605372,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.71, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7605373,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,female,Visium,Visium,False,,1768,Three-dimensional molecular architecture of mouse organogenesis,GSE237308,GSE237308,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,embryo,,luna,,,age rule: embryonic day,embryonic,embryonic day 13.5,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37524711,,GSM7605373,,,train,sda-all,samples/GSE237308/GSM7605373,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7605374,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,female,Visium,Visium,False,,1651,Three-dimensional molecular architecture of mouse organogenesis,GSE237308,GSE237308,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,embryo,,luna,,,age rule: embryonic day,embryonic,embryonic day 13.5,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,,,,,,,VERIFIED,,,,37524711,,GSM7605374,,,train,sda-all,samples/GSE237308/GSM7605374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7648699,skin,disease,inflammatory disease,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,378,Epithelial-Immune Metabolic Codependency Fuels Inflammatory Disease [Spatial Transcriptomics],GSE237771,GSE237771+GSE237772,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0021166,luna,psoriasis,Post-Treatment Lesional,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.560778082574235,platform_constant,4.560778082574235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38772365,,GSM7648699,,,train,hesrt,samples/GSE237771/GSM7648699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM7648700,skin,disease,inflammatory disease,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,276,Epithelial-Immune Metabolic Codependency Fuels Inflammatory Disease [Spatial Transcriptomics],GSE237771,GSE237771+GSE237772,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,MONDO:0021166,mondo_predicate (Luna: perturbation),psoriasis,Post-Treatment Non-Lesional,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.39089229525017,platform_constant,4.39089229525017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38772365,,GSM7648700,,,train,hesrt,samples/GSE237771/GSM7648700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.46, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7657717,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,909,Nextflow Pipeline for Visium and H&E Data from Patient-Derived Xenograft Samples,GSE238004,GSE238004,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.019425893704697,platform_constant,4.019425893704697,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38626768,,GSM7657717,,,train,hesrt,samples/GSE238004/GSM7657717,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7657718,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1255,Nextflow Pipeline for Visium and H&E Data from Patient-Derived Xenograft Samples,GSE238004,GSE238004,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.083002127805329,platform_constant,4.083002127805329,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38626768,,GSM7657718,,,train,hesrt,samples/GSE238004/GSM7657718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7657719,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1223,Nextflow Pipeline for Visium and H&E Data from Patient-Derived Xenograft Samples,GSE238004,GSE238004,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.03355418778957,platform_constant,4.03355418778957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38626768,,GSM7657719,,,train,hesrt,samples/GSE238004/GSM7657719,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7657720,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1098,Nextflow Pipeline for Visium and H&E Data from Patient-Derived Xenograft Samples,GSE238004,GSE238004,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.04061788949363,platform_constant,4.04061788949363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38626768,,GSM7657720,,,train,hesrt,samples/GSE238004/GSM7657720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7659430,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1432,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,GSE238145,GSE238145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001255,FFPE bladder tumor,MONDO:0004986,luna,,,luna,not stated,,not stated,,GSE238145:patient 10,patient 10,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38656869,,GSM7659430,,,train,sda-all,samples/GSE238145/GSM7659430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7659431,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,699,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,GSE238145,GSE238145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001255,FFPE bladder tumor,MONDO:0004986,luna,,,luna,not stated,,not stated,,GSE238145:patient 1,patient 1,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38656869,,GSM7659431,,,train,sda-all,samples/GSE238145/GSM7659431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171241,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,13475,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,GSE238145,GSE238145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001255,FFPE bladder tumor,MONDO:0004986,luna,,,luna,not stated,,not stated,,GSE238145:patient 2,patient 2,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18660,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38656869,,GSM8171241,,,train,sda-all,samples/GSE238145/GSM8171241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171242,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,7431,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,GSE238145,GSE238145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001255,FFPE bladder tumor,MONDO:0004986,luna,,,luna,not stated,,not stated,,GSE238145:patient 3,patient 3,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18660,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38656869,,GSM8171242,,,train,sda-all,samples/GSE238145/GSM8171242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171243,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,10913,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,GSE238145,GSE238145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001255,FFPE bladder tumor,MONDO:0004986,luna,,,luna,not stated,,not stated,,GSE238145:patient 4,patient 4,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18660,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38656869,,GSM8171243,,,train,sda-all,samples/GSE238145/GSM8171243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171244,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2062,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,GSE238145,GSE238145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001255,FFPE bladder tumor,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18660,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38656869,,GSM8171244,,,train,sda-all,samples/GSE238145/GSM8171244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171245,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,11215,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,GSE238145,GSE238145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001255,FFPE bladder tumor,MONDO:0004986,luna,,,luna,not stated,,not stated,,GSE238145:patient 7,patient 7,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18660,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38656869,,GSM8171245,,,train,sda-all,samples/GSE238145/GSM8171245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171246,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,10621,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,GSE238145,GSE238145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001255,FFPE bladder tumor,MONDO:0004986,luna,,,luna,not stated,,not stated,,GSE238145:patient 8,patient 8,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18660,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,38656869,,GSM8171246,,,train,sda-all,samples/GSE238145/GSM8171246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171247,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,12686,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,GSE238145,GSE238145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001255,FFPE bladder tumor,MONDO:0004986,luna,,,luna,not stated,,not stated,,GSE238145:patient 9,patient 9,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18660,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38656869,,GSM8171247,,,train,sda-all,samples/GSE238145/GSM8171247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171248,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2448,Batf3-dendritic cells and 4-1BB/4-1BB ligand axis are required at the effector phase within the tumor microenvironment for PD-1/PD-L1 blockade efficacy,GSE238145,GSE238145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001255,FFPE bladder tumor,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18660,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38656869,,GSM8171248,,,train,sda-all,samples/GSE238145/GSM8171248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661256,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2766,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,GSE238264,GSE238264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,hepatocellular carcinoma,MONDO:0007256,luna,,cabozantinib+nivolumab,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.050527878810616,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain needs to be confirmed,37723590,,GSM7661256,,,test,sda-all,samples/GSE238264/GSM7661256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661257,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2170,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,GSE238264,GSE238264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,hepatocellular carcinoma,MONDO:0007256,luna,,cabozantinib+nivolumab,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.026500871970528,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain needs to be confirmed,37723590,,GSM7661257,,,test,sda-all,samples/GSE238264/GSM7661257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661258,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3002,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,GSE238264,GSE238264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,hepatocellular carcinoma,MONDO:0007256,luna,,cabozantinib+nivolumab,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.993536413188702,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37723590,,GSM7661258,,,test,sda-all,samples/GSE238264/GSM7661258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661259,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1320,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,GSE238264,GSE238264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,hepatocellular carcinoma,MONDO:0007256,luna,,cabozantinib+nivolumab,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9573557720855534,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37723590,,GSM7661259,,,test,sda-all,samples/GSE238264/GSM7661259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661260,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2575,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,GSE238264,GSE238264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,hepatocellular carcinoma,MONDO:0007256,luna,,cabozantinib+nivolumab,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.026418922831429,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37723590,,GSM7661260,,,test,sda-all,samples/GSE238264/GSM7661260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7661261,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2453,Spatial transcriptomics analysis of neoadjuvant cabozantinib and nivolumab in advanced hepatocellular carcinoma identifies independent mechanisms of resistance and recurrence,GSE238264,GSE238264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,hepatocellular carcinoma,MONDO:0007256,luna,,cabozantinib+nivolumab,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.1346332713570835,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,37723590,,GSM7661261,,,test,sda-all,samples/GSE238264/GSM7661261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7679867,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3010,Age-related epithelial defects limit thymic function and regeneration [visium],GSE240015,GSE240015,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,untreated,age rule: age with unit,adult,2 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39112630,,GSM7679867,,,train,hesrt,samples/GSE240015/GSM7679867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM7679868,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,1392,Age-related epithelial defects limit thymic function and regeneration [visium],GSE240015,GSE240015,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,untreated,age rule: age with unit,aged,18 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39112630,,GSM7679868,,,train,hesrt,samples/GSE240015/GSM7679868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7681545,plant,perturbation,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,False,,1357,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102+GSE240107,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,49822,counts,um,1.0,verified,,PARTIAL,ABSENT,ABSENT,,,VERIFIED,UNSURE,,,,,GSM7681545,,,train,sda-all,samples/GSE240102/GSM7681545,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": NaN, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM7681546,plant,perturbation,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,2087,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,49822,counts,pixel,3.884114799089389,platform_constant,3.884114799089389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681546,,,test,hesrt,samples/GSE240102/GSM7681546,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": NaN, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM7681547,plant,perturbation,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,2054,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,49822,counts,pixel,3.8975544820484447,platform_constant,3.8975544820484447,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681547,,,test,hesrt,samples/GSE240102/GSM7681547,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": NaN, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM7681548,plant,perturbation,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1932,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,49822,counts,pixel,3.884114799089372,platform_constant,3.884114799089372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681548,,,test,hesrt,samples/GSE240102/GSM7681548,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": NaN, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM7681549,plant,perturbation,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,2506,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.8707903383699764,platform_constant,3.8707903383699764,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681549,,,test,hesrt,samples/GSE240102/GSM7681549,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": NaN, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM7681550,plant,perturbation,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,2657,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.857511586154025,platform_constant,3.857511586154025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681550,,,test,hesrt,samples/GSE240102/GSM7681550,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": NaN, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM7681551,plant,normal,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,2844,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.884114799089389,platform_constant,3.884114799089389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681551,,,test,hesrt,samples/GSE240102/GSM7681551,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": NaN, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM7681552,plant,normal,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,2360,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.884114799089372,platform_constant,3.884114799089372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681552,,,test,hesrt,samples/GSE240102/GSM7681552,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": NaN, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM7681553,plant,perturbation,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,False,,1733,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102+GSE240107,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,94448,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,UNSURE,,,,,GSM7681553,,,train,sda-all,samples/GSE240102/GSM7681553,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": NaN, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM7681554,plant,perturbation,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1512,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.900244997569857,platform_constant,3.900244997569857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681554,,,test,hesrt,samples/GSE240102/GSM7681554,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": NaN, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM7681555,plant,perturbation,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1782,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.900244997569866,platform_constant,3.900244997569866,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681555,,,test,hesrt,samples/GSE240102/GSM7681555,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": NaN, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM7681556,plant,perturbation,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1808,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,"inoculated with Rhizophagus irregularis DAOM 181602, DAOM 197198",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.900244997569857,platform_constant,3.900244997569857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681556,,,test,hesrt,samples/GSE240102/GSM7681556,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": NaN, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM7681557,plant,normal,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1920,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,not inoculated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.8993612095189434,platform_constant,3.8993612095189434,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681557,,,test,hesrt,samples/GSE240102/GSM7681557,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.77}",,
GSM7681558,plant,normal,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,2217,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,not inoculated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.899361209518926,platform_constant,3.899361209518926,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681558,,,test,hesrt,samples/GSE240102/GSM7681558,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.86}",,
GSM7681559,plant,normal,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1836,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,not inoculated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.899361209518943,platform_constant,3.899361209518943,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681559,,,test,hesrt,samples/GSE240102/GSM7681559,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.97}",,
GSM7681560,plant,normal,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1948,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,not inoculated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.900244997569874,platform_constant,3.900244997569874,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681560,,,test,hesrt,samples/GSE240102/GSM7681560,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.92}",,
GSM7681561,plant,normal,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1655,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,not inoculated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.900775558934123,platform_constant,3.900775558934123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681561,,,test,hesrt,samples/GSE240102/GSM7681561,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.93}",,
GSM7681562,plant,normal,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1559,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,not inoculated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.900775558934123,platform_constant,3.900775558934123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681562,,,test,hesrt,samples/GSE240102/GSM7681562,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.73}",,
GSM7681563,plant,normal,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1453,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,not inoculated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.8758972395932374,platform_constant,3.8758972395932374,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681563,,,test,hesrt,samples/GSE240102/GSM7681563,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7681564,plant,normal,,,primary tissue,Medicago truncatula,barrel medic,not stated,unknown,Visium,Visium,True,H&E,1400,Spatial Co-transcriptomics Reveals Discrete Stages of the Arbuscular Mycorrhizal Symbiosis II,GSE240102,GSE240102,3880,Medicago truncatula,3880,,False,False,GEO organism field,Medicago truncatula,,luna,,root,,luna,,not inoculated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,94448,counts,pixel,3.883768465932773,platform_constant,3.883768465932773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7681564,,,test,hesrt,samples/GSE240102/GSM7681564,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.88}",,
GSM7689279,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,juvenile,unknown,Slide-seq,Slide-seq,False,,75538,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,GSE240271,GSE240271,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Untreated,luna,juvenile,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689279,,,train,sda-all,samples/GSE240271/GSM7689279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM7689280,ovary,perturbation,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,75094,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,GSE240271,GSE240271,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,PMSG,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689280,,,train,sda-all,samples/GSE240271/GSM7689280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7689281,ovary,perturbation,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,77202,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,GSE240271,GSE240271,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,PMSG+hCG,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689281,,,train,sda-all,samples/GSE240271/GSM7689281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7689282,ovary,perturbation,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,74090,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,GSE240271,GSE240271,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,PMSG+hCG,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689282,,,train,sda-all,samples/GSE240271/GSM7689282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7689283,ovary,perturbation,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,75703,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,GSE240271,GSE240271,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,PMSG+hCG,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689283,,,train,sda-all,samples/GSE240271/GSM7689283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7689284,ovary,perturbation,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,76849,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,GSE240271,GSE240271,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,PMSG+hCG,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689284,,,train,sda-all,samples/GSE240271/GSM7689284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7689285,ovary,perturbation,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,77826,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,GSE240271,GSE240271,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,PMSG+hCG,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689285,,,train,sda-all,samples/GSE240271/GSM7689285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7689286,ovary,perturbation,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,74794,High-resolution spatial transcriptomics of hormone-induced ovulation in mice,GSE240271,GSE240271,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,PMSG+hCG,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,37662215;40060619;41888598,,GSM7689286,,,train,sda-all,samples/GSE240271/GSM7689286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7708218,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,False,,1196,Spatial transcriptomics map of the embryonic mouse brain: a tool to explore neurogenesis,GSE240715,GSE240715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain (E13.5),,luna,,WT,luna,embryonic,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,37855382,,GSM7708218,,,train,sda-all,samples/GSE240715/GSM7708218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7708219,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,False,,1152,Spatial transcriptomics map of the embryonic mouse brain: a tool to explore neurogenesis,GSE240715,GSE240715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain (E13.5),,luna,,WT,luna,embryonic,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,37855382,,GSM7708219,,,train,sda-all,samples/GSE240715/GSM7708219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7708220,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,False,,984,Spatial transcriptomics map of the embryonic mouse brain: a tool to explore neurogenesis,GSE240715,GSE240715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain (E13.5),,luna,,WT,luna,embryonic,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,37855382,,GSM7708220,,,train,sda-all,samples/GSE240715/GSM7708220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7708221,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,False,,1266,Spatial transcriptomics map of the embryonic mouse brain: a tool to explore neurogenesis,GSE240715,GSE240715,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain (E13.5),,luna,,WT,luna,embryonic,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,37855382,,GSM7708221,,,train,sda-all,samples/GSE240715/GSM7708221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7710356,lymph node,disease,idiopathic multicentric Castleman disease;multicentric Castleman disease,lymph node,primary tissue,Homo sapiens,human,not stated,female,Stereo-seq,Stereo-seq,False,,33303,Spatial transcriptomic data of a lymph node from an individual with Multicentric Castleman Disease,GSE240843,GSE240843,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,lymph node,MONDO:0035838;MONDO:0019754,luna,Idiopathic Multicentric Castleman Disease,,luna,not stated,,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,28978,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,38170173,,GSM7710356,,,train,sda-all,samples/GSE240843/GSM7710356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7717016,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,880,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,Skin,age rule: bare number read as years,adult,22,extracted field,female,GSE241124:Donor4,Donor4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.185861709362106,platform_constant,4.185861709362106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM7717016,,,train,hesrt,samples/GSE241124/GSM7717016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.54, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7717017,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1745,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 1,age rule: bare number read as years,adult,22,extracted field,female,GSE241124:Donor4,Donor4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.185880309733614,platform_constant,4.185880309733614,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM7717017,,,train,hesrt,samples/GSE241124/GSM7717017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7717018,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1334,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 7,age rule: bare number read as years,adult,22,extracted field,female,GSE241124:Donor4,Donor4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.1786880967760025,platform_constant,4.1786880967760025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM7717018,,,train,hesrt,samples/GSE241124/GSM7717018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.58, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7717019,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1996,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 30,age rule: bare number read as years,adult,22,extracted field,female,GSE241124:Donor4,Donor4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.185880309733634,platform_constant,4.185880309733634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM7717019,,,train,hesrt,samples/GSE241124/GSM7717019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238462,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1382,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,Skin,age rule: bare number read as years,adult,24,extracted field,male,GSE241124:Donor1,Donor1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.097665189012112,platform_constant,4.097665189012112,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238462,,,train,hesrt,samples/GSE241124/GSM8238462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.52, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8238463,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2050,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 1,age rule: bare number read as years,adult,24,extracted field,male,GSE241124:Donor1,Donor1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.141726391299105,platform_constant,4.141726391299105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238463,,,train,hesrt,samples/GSE241124/GSM8238463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.84, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238464,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1802,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 7,age rule: bare number read as years,adult,24,extracted field,male,GSE241124:Donor1,Donor1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.141726391299106,platform_constant,4.141726391299106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238464,,,train,hesrt,samples/GSE241124/GSM8238464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238465,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1354,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 30,age rule: bare number read as years,adult,24,extracted field,male,GSE241124:Donor1,Donor1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.141769333406583,platform_constant,4.141769333406583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238465,,,train,hesrt,samples/GSE241124/GSM8238465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238466,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,914,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,Skin,age rule: bare number read as years,adult,46,extracted field,female,GSE241124:Donor2,Donor2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.185880309733634,platform_constant,4.185880309733634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238466,,,train,hesrt,samples/GSE241124/GSM8238466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 0.56, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8238467,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1901,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 1,age rule: bare number read as years,adult,46,extracted field,female,GSE241124:Donor2,Donor2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.185886509912559,platform_constant,4.185886509912559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238467,,,train,hesrt,samples/GSE241124/GSM8238467,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238468,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1953,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 7,age rule: bare number read as years,adult,46,extracted field,female,GSE241124:Donor2,Donor2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.185886509912559,platform_constant,4.185886509912559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238468,,,train,hesrt,samples/GSE241124/GSM8238468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.67, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238469,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2364,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 30,age rule: bare number read as years,adult,46,extracted field,female,GSE241124:Donor2,Donor2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.185886509912559,platform_constant,4.185886509912559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238469,,,train,hesrt,samples/GSE241124/GSM8238469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8238470,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,793,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,Skin,age rule: bare number read as years,adult,24,extracted field,male,GSE241124:Donor3,Donor3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.185880309733634,platform_constant,4.185880309733634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238470,,,train,hesrt,samples/GSE241124/GSM8238470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.5700000000000001, ""uberon"": 0.79, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238471,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1507,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 1,age rule: bare number read as years,adult,24,extracted field,male,GSE241124:Donor3,Donor3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.185880309733634,platform_constant,4.185880309733634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238471,,,train,hesrt,samples/GSE241124/GSM8238471,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.78, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238472,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1749,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 7,age rule: bare number read as years,adult,24,extracted field,male,GSE241124:Donor3,Donor3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.178688096775992,platform_constant,4.178688096775992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238472,,,train,hesrt,samples/GSE241124/GSM8238472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 0.66, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8238473,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2245,Spatiotemporal Single-Cell Roadmap of Human Skin Wound Healing (Spatial),GSE241124,GSE241124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,day 30,age rule: bare number read as years,adult,24,extracted field,male,GSE241124:Donor3,Donor3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36600,counts,pixel,4.185880309733594,platform_constant,4.185880309733594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39366968;39468077;39729995,,GSM8238473,,,train,hesrt,samples/GSE241124/GSM8238473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM7727540,blood vessel,disease,atherosclerosis,carotid artery segment,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1165,"A Proteomic Atlas of Atherosclerosis: The Contribution of Proteoglycans to Sex Differences, Plaque Phenotypes and Outcomes",GSE241346,GSE241346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,Carotid plaque tissue,MONDO:0005311,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.559430057370092,platform_constant,4.559430057370092,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37646165,,GSM7727540,,,train,hesrt,samples/GSE241346/GSM7727540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM7748222,brain,normal,,hypothalamus,primary tissue,Rattus norvegicus,Norway rat,adult,female,Visium,Visium,True,H&E,1947,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,GSE242058,GSE242058,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0001898,Female brain section containing the medial hypothalamus,,luna,,,age rule: age with unit,not stated,3–4 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,34325,counts,pixel,4.806267426377738,platform_constant,4.806267426377738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748222,,,train,hesrt,samples/GSE242058/GSM7748222,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7748223,brain,normal,,hypothalamus,primary tissue,Rattus norvegicus,Norway rat,adult,female,Visium,Visium,True,H&E,1848,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,GSE242058,GSE242058,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0001898,Female brain section containing the medial hypothalamus,,luna,,,age rule: age with unit,not stated,3–4 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,34325,counts,pixel,4.806650803960589,platform_constant,4.806650803960589,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748223,,,train,hesrt,samples/GSE242058/GSM7748223,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.58, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM7748224,brain,normal,,hypothalamus,primary tissue,Rattus norvegicus,Norway rat,adult,female,Visium,Visium,True,H&E,2411,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,GSE242058,GSE242058,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0001898,Female brain section containing the medial hypothalamus,,luna,,,age rule: age with unit,not stated,3–4 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,34325,counts,pixel,4.792851104214434,platform_constant,4.792851104214434,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748224,,,train,hesrt,samples/GSE242058/GSM7748224,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 0.99}",,
GSM7748225,brain,normal,,hypothalamus,primary tissue,Rattus norvegicus,Norway rat,adult,female,Visium,Visium,True,H&E,2108,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,GSE242058,GSE242058,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0001898,Female brain section containing the medial hypothalamus,,luna,,,age rule: age with unit,not stated,3–4 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,34325,counts,pixel,4.787849039422877,platform_constant,4.787849039422877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748225,,,train,hesrt,samples/GSE242058/GSM7748225,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 0.98}",,
GSM7748226,brain,normal,,hypothalamus,primary tissue,Rattus norvegicus,Norway rat,adult,male,Visium,Visium,True,H&E,2152,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,GSE242058,GSE242058,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0001898,Male brain section containing the medial hypothalamus,,luna,,,age rule: age with unit,not stated,3–4 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,34325,counts,pixel,4.782612533907777,platform_constant,4.782612533907777,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748226,,,train,hesrt,samples/GSE242058/GSM7748226,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 0.73}",,
GSM7748227,brain,normal,,hypothalamus,primary tissue,Rattus norvegicus,Norway rat,adult,male,Visium,Visium,True,H&E,2442,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,GSE242058,GSE242058,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0001898,Male brain section containing the medial hypothalamus,,luna,,,age rule: age with unit,not stated,3–4 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,34325,counts,pixel,4.805116757501321,platform_constant,4.805116757501321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748227,,,train,hesrt,samples/GSE242058/GSM7748227,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM7748228,brain,normal,,hypothalamus,primary tissue,Rattus norvegicus,Norway rat,not stated,male,Visium,Visium,True,H&E,1937,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,GSE242058,GSE242058,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0001898,Male brain section containing the medial hypothalamus,,luna,,,luna,not stated,,extracted field,male,GSE242058:Male3,Male3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,34325,counts,pixel,4.8183190175913255,platform_constant,4.8183190175913255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748228,,,train,hesrt,samples/GSE242058/GSM7748228,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5700000000000001, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM7748229,brain,normal,,hypothalamus,primary tissue,Rattus norvegicus,Norway rat,not stated,male,Visium,Visium,True,H&E,2759,Spatial Transcriptomics Reveal Basal Sex Differences in Supraoptic Nucleus Gene Expression of Adult Rats Related to Cell Signaling and Ribosomal Pathways,GSE242058,GSE242058,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0001898,Male brain section containing the medial hypothalamus,,luna,,,luna,not stated,,extracted field,male,GSE242058:Male4,Male4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,34325,counts,pixel,4.793233742494125,platform_constant,4.793233742494125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37858270,10.1186/s13293-023-00554-3,GSM7748229,,,train,hesrt,samples/GSE242058/GSM7748229,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7755670,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,2176,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],GSE242214,GSE242214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: postnatal day,neonatal or infant,6 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.8849211017394925,platform_constant,0.8849211017394925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM7755670,,,val,hesrt,samples/GSE242214/GSM7755670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7755671,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,3269,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],GSE242214,GSE242214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: postnatal day,neonatal or infant,12 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.8849211017394925,platform_constant,0.8849211017394925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM7755671,,,val,hesrt,samples/GSE242214/GSM7755671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9405376,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,2134,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],GSE242214,GSE242214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: postnatal day,neonatal or infant,6 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.4405243598534552,platform_constant,0.4999935504603813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM9405376,,,val,hesrt,samples/GSE242214/GSM9405376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9405377,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,2794,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],GSE242214,GSE242214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: postnatal day,neonatal or infant,12 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.4424605508697462,platform_constant,0.4999964046644229,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM9405377,,,val,hesrt,samples/GSE242214/GSM9405377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9405378,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3521,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],GSE242214,GSE242214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: postnatal day,adult,60 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.4424605508697462,platform_constant,0.5000059982371987,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM9405378,,,val,hesrt,samples/GSE242214/GSM9405378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM9405379,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2900,A molecular atlas of brain neurovascular interactions reveals a spatiotemporal requirement of TGFβ signaling in brain angiogenesis [Visium],GSE242214,GSE242214,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: postnatal day,adult,60 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.4424605508697462,platform_constant,0.5000123957299578,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42173924,,GSM9405379,,,val,hesrt,samples/GSE242214/GSM9405379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM7757059,prostate,disease,benign prostatic hyperplasia,prostate gland,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,False,,2945,Spatial transcriptomic profiles of prostate tissue obtained from a patient diagnosed with benign prostatic hyperplasia (BPH).,GSE242249,GSE242249,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002367,prostate,MONDO:0010811,luna,benign prostatic hyperplasia,,luna,not stated,,extracted field,male,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,36601,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,38654277,,GSM7757059,,,val,sda-all,samples/GSE242249/GSM7757059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7757569,kidney,normal,,kidney,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E,4443,Spatiotemporal immune atlas of a clinical-grade gene-edited pig-to-human kidney xenotransplant,GSE242270,GSE242270,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,,luna,UBERON:0002113,kidney,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,41918,counts,pixel,4.38536605977072,platform_constant,4.38536605977072,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38605083,10.1038/s41467-024-47454-7,GSM7757569,,,train,hesrt,samples/GSE242270/GSM7757569,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7757970,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2830,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.097613285302035,platform_constant,4.097613285302035,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757970,,,train,hesrt,samples/GSE242311/GSM7757970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757971,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2185,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.049361670416401,platform_constant,4.049361670416401,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757971,,,train,hesrt,samples/GSE242311/GSM7757971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7757972,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1505,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.022059681751519,platform_constant,4.022059681751519,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757972,,,train,hesrt,samples/GSE242311/GSM7757972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7757973,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2420,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.000703304897205,platform_constant,4.000703304897205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757973,,,train,hesrt,samples/GSE242311/GSM7757973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757974,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2276,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.975879183877807,platform_constant,3.975879183877807,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757974,,,train,hesrt,samples/GSE242311/GSM7757974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757975,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3210,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0000000224,platform_constant,4.0000000224,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757975,,,train,hesrt,samples/GSE242311/GSM7757975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757976,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2622,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9835185843037886,platform_constant,3.9835185843037886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757976,,,train,hesrt,samples/GSE242311/GSM7757976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7757977,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2707,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0450895438572845,platform_constant,4.0450895438572845,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757977,,,train,hesrt,samples/GSE242311/GSM7757977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757978,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2753,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.091079192487779,platform_constant,4.091079192487779,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757978,,,train,hesrt,samples/GSE242311/GSM7757978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757979,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2166,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9566282505812675,platform_constant,3.9566282505812675,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757979,,,train,hesrt,samples/GSE242311/GSM7757979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7757980,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2305,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9566282505812675,platform_constant,3.9566282505812675,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757980,,,train,hesrt,samples/GSE242311/GSM7757980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7757981,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3127,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.109676113913455,platform_constant,4.109676113913455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757981,,,train,hesrt,samples/GSE242311/GSM7757981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7757982,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2440,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.961905904816689,platform_constant,3.961905904816689,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757982,,,train,hesrt,samples/GSE242311/GSM7757982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757983,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2670,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9410471057851293,platform_constant,3.9410471057851293,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757983,,,train,hesrt,samples/GSE242311/GSM7757983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7757984,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2885,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.015577677063346,platform_constant,4.015577677063346,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757984,,,train,hesrt,samples/GSE242311/GSM7757984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7757985,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3275,Spatial heterogeneity of integrins and their ligands in primary breast tumors,GSE242311,GSE242311,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer,MONDO:0007254,luna,breast cancer,"anthracyclines, taxanes",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.015829266504713,platform_constant,4.015829266504713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39456890;42539924,,GSM7757985,,,train,hesrt,samples/GSE242311/GSM7757985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759698,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3594,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,0.8522452146352486,platform_constant,0.8522452146352486,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759698,,,train,hesrt,samples/GSE242352/GSM7759698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759699,brain,disease,oligodendroglioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4029,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0016695,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.34965034965034963,platform_constant,0.5000052671405922,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759699,,,train,hesrt,samples/GSE242352/GSM7759699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759700,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3611,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8620369344188775,platform_constant,0.8620369344188775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759700,,,train,hesrt,samples/GSE242352/GSM7759700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759701,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2640,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8549194682417608,platform_constant,0.8549194682417608,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759701,,,train,hesrt,samples/GSE242352/GSM7759701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759702,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1879,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8620689655172413,platform_constant,0.8620689655172413,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759702,,,train,hesrt,samples/GSE242352/GSM7759702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759703,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2416,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8620369344188775,platform_constant,0.8620369344188775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759703,,,train,hesrt,samples/GSE242352/GSM7759703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759704,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2624,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0021042,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8620689655172413,platform_constant,0.8620689655172413,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759704,,,train,hesrt,samples/GSE242352/GSM7759704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7759705,brain,disease,oligodendroglioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3567,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0016695,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8620369344188775,platform_constant,0.8620369344188775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759705,,,train,hesrt,samples/GSE242352/GSM7759705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7759706,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3666,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.6451478638678313,platform_constant,0.6451478638678313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759706,,,train,hesrt,samples/GSE242352/GSM7759706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7759707,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2439,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.6451612903225806,platform_constant,0.6451612903225806,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759707,,,train,hesrt,samples/GSE242352/GSM7759707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7759708,brain,disease,oligodendroglioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3108,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0016695,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.6451478638678313,platform_constant,0.6451478638678313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM7759708,,,train,hesrt,samples/GSE242352/GSM7759708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513873,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2028,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.3845130131210745,platform_constant,0.5000136346732048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM8513873,,,train,hesrt,samples/GSE242352/GSM8513873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513874,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3535,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.3846125398585985,platform_constant,0.5000030735611136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM8513874,,,train,hesrt,samples/GSE242352/GSM8513874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513875,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1298,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.3846125398585985,platform_constant,0.5000008144589078,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM8513875,,,train,hesrt,samples/GSE242352/GSM8513875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513877,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4891,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.38461538461538464,platform_constant,0.4999887110248132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM8513877,,,train,hesrt,samples/GSE242352/GSM8513877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513879,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4473,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.38456987608009957,platform_constant,0.49999727710138214,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,40514380,,GSM8513879,,,train,hesrt,samples/GSE242352/GSM8513879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8513880,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2642,Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas,GSE242352,GSE242352,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,glioma,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.3846125398585985,platform_constant,0.49999630181617805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40514380,,GSM8513880,,,train,hesrt,samples/GSE242352/GSM8513880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7764368,lung,disease,infectious disease,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3452,Probe-based spatial host-pathogen genes expression to study bacterial pathogenesis and the regulation of bacterial virulence factors in tissue.,GSE242471,GSE242471,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,MONDO:0005550,luna,Mycobacterium abscessus infection,chronic_infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19467,counts,pixel,0.630405287987515,platform_constant,0.630405287987515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39384974,,GSM7764368,,,train,hesrt,samples/GSE242471/GSM7764368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7764369,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2938,Probe-based spatial host-pathogen genes expression to study bacterial pathogenesis and the regulation of bacterial virulence factors in tissue.,GSE242471,GSE242471,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,normal,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19467,counts,pixel,0.6296882928849031,platform_constant,0.6296882928849031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39384974,,GSM7764369,,,train,hesrt,samples/GSE242471/GSM7764369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8067258,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2875,Probe-based spatial host-pathogen genes expression to study bacterial pathogenesis and the regulation of bacterial virulence factors in tissue.,GSE242471,GSE242471,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,Mycobacterium abscessus infection,chronic_infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19467,counts,pixel,0.7200897203181807,platform_constant,0.7200897203181807,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39384974,,GSM8067258,,,train,hesrt,samples/GSE242471/GSM8067258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM8067259,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2438,Probe-based spatial host-pathogen genes expression to study bacterial pathogenesis and the regulation of bacterial virulence factors in tissue.,GSE242471,GSE242471,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,normal,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19467,counts,pixel,0.7195585612751749,platform_constant,0.7195585612751749,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39384974,,GSM8067259,,,train,hesrt,samples/GSE242471/GSM8067259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7777520,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,1333,Cancer-associated Fibroblast Spatial Heterogeneity and EMILIN1 Expression in Cancer Stroma Modulate TGF-b Activity and CD8+ T-Cell Infiltration in Breast Cancer,GSE243022,GSE243022,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer lesion,MONDO:0007254,luna,breast cancer,HER2,age rule: bare number read as years,aged,89,not stated,,GSE243022:Patient A1,Patient A1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.802680391435082,platform_constant,4.802680391435082,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38505604,,GSM7777520,,,train,hesrt,samples/GSE243022/GSM7777520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7777521,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,757,Cancer-associated Fibroblast Spatial Heterogeneity and EMILIN1 Expression in Cancer Stroma Modulate TGF-b Activity and CD8+ T-Cell Infiltration in Breast Cancer,GSE243022,GSE243022,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer lesion,MONDO:0007254,luna,breast cancer,Triple negqtive,age rule: bare number read as years,aged,79,not stated,,GSE243022:Patient B1,Patient B1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.786035131808357,platform_constant,4.786035131808357,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38505604,,GSM7777521,,,train,hesrt,samples/GSE243022/GSM7777521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7777522,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,642,Cancer-associated Fibroblast Spatial Heterogeneity and EMILIN1 Expression in Cancer Stroma Modulate TGF-b Activity and CD8+ T-Cell Infiltration in Breast Cancer,GSE243022,GSE243022,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer lesion,MONDO:0007254,luna,breast cancer,Luminal-HER2,age rule: bare number read as years,adult,52,not stated,,GSE243022:Patient C1,Patient C1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.812213486373137,platform_constant,4.812213486373137,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38505604,,GSM7777522,,,train,hesrt,samples/GSE243022/GSM7777522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7777523,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,849,Cancer-associated Fibroblast Spatial Heterogeneity and EMILIN1 Expression in Cancer Stroma Modulate TGF-b Activity and CD8+ T-Cell Infiltration in Breast Cancer,GSE243022,GSE243022,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Breast cancer lesion,MONDO:0007254,luna,breast cancer,Luminal,age rule: bare number read as years,adult,56,not stated,,GSE243022:Patient D1,Patient D1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.784896049400421,platform_constant,4.784896049400421,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38505604,,GSM7777523,,,train,hesrt,samples/GSE243022/GSM7777523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779544,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,73802,T cell mediated microglia activation triggers myelin pathology in a model of amyloidosis [MERFISH],GSE243120,GSE243120,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0019065;MONDO:0004975,luna,,,age rule: age with unit,adult,9.5 months,not stated,,GSE243120:Animal 1,Animal 1,fixed frozen,fixed-frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38937583,,GSM7779544,,,train,sda-all,samples/GSE243120/GSM7779544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779545,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,68782,T cell mediated microglia activation triggers myelin pathology in a model of amyloidosis [MERFISH],GSE243120,GSE243120,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0019065;MONDO:0004975,luna,,,age rule: age with unit,adult,9.5 months,not stated,,GSE243120:Animal 1,Animal 1,fixed frozen,fixed-frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38937583,,GSM7779545,,,train,sda-all,samples/GSE243120/GSM7779545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779546,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,62742,T cell mediated microglia activation triggers myelin pathology in a model of amyloidosis [MERFISH],GSE243120,GSE243120,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0019065;MONDO:0004975,luna,,,age rule: age with unit,adult,9.5 months,not stated,,GSE243120:Animal 2,Animal 2,fixed frozen,fixed-frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38937583,,GSM7779546,,,train,sda-all,samples/GSE243120/GSM7779546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779547,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,59368,T cell mediated microglia activation triggers myelin pathology in a model of amyloidosis [MERFISH],GSE243120,GSE243120,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0019065;MONDO:0004975,luna,,,age rule: age with unit,adult,9.5 months,not stated,,GSE243120:Animal 2,Animal 2,fixed frozen,fixed-frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38937583,,GSM7779547,,,train,sda-all,samples/GSE243120/GSM7779547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779548,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,73194,T cell mediated microglia activation triggers myelin pathology in a model of amyloidosis [MERFISH],GSE243120,GSE243120,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0019065;MONDO:0004975,luna,,,age rule: age with unit,adult,9.5 months,not stated,,GSE243120:Animal 3,Animal 3,fixed frozen,fixed-frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38937583,,GSM7779548,,,train,sda-all,samples/GSE243120/GSM7779548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779847,brain,perturbation,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2853,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Fear conditioned,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.361077457132238,platform_constant,4.361077457132238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779847,,,train,hesrt,samples/GSE243140/GSM7779847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779848,brain,normal,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2940,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.343204516132813,platform_constant,4.343204516132813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779848,,,train,hesrt,samples/GSE243140/GSM7779848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM7779849,brain,perturbation,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3051,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Fear conditioned,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.361077457132239,platform_constant,4.361077457132239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779849,,,train,hesrt,samples/GSE243140/GSM7779849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779850,brain,normal,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2694,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.343204516132824,platform_constant,4.343204516132824,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779850,,,train,hesrt,samples/GSE243140/GSM7779850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779851,brain,perturbation,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2990,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Fear conditioned,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.4777044567347115,platform_constant,4.4777044567347115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779851,,,train,hesrt,samples/GSE243140/GSM7779851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779852,brain,normal,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3168,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.438679270805428,platform_constant,4.438679270805428,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779852,,,train,hesrt,samples/GSE243140/GSM7779852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7779853,brain,perturbation,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3019,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Fear conditioned,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.477704456734717,platform_constant,4.477704456734717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779853,,,train,hesrt,samples/GSE243140/GSM7779853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7779854,brain,normal,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3124,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.438679270805411,platform_constant,4.438679270805411,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779854,,,train,hesrt,samples/GSE243140/GSM7779854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.84, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7779855,brain,perturbation,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3181,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Fear conditioned,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.361077457132238,platform_constant,4.361077457132238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779855,,,train,hesrt,samples/GSE243140/GSM7779855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779856,brain,normal,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2661,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.343204516132824,platform_constant,4.343204516132824,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779856,,,train,hesrt,samples/GSE243140/GSM7779856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779857,brain,perturbation,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3145,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Fear conditioned,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.343204516132813,platform_constant,4.343204516132813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779857,,,train,hesrt,samples/GSE243140/GSM7779857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7779858,brain,normal,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2599,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.36107745713226,platform_constant,4.36107745713226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779858,,,train,hesrt,samples/GSE243140/GSM7779858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779859,brain,perturbation,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2785,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Fear conditioned,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.479124565562172,platform_constant,4.479124565562172,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779859,,,train,hesrt,samples/GSE243140/GSM7779859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779860,brain,normal,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2517,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.36107745713226,platform_constant,4.36107745713226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779860,,,train,hesrt,samples/GSE243140/GSM7779860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7779861,brain,perturbation,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3006,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Fear conditioned,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.361077457132239,platform_constant,4.361077457132239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779861,,,train,hesrt,samples/GSE243140/GSM7779861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7779862,brain,normal,,left cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3329,Spatial transcriptomics reveals modulation of transcriptional networks across  brain regions after auditory threat conditioning,GSE243140,GSE243140,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002812,left hemisphere mice brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.8970490842826315,platform_constant,4.8970490842826315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7779862,,,train,hesrt,samples/GSE243140/GSM7779862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7780155,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,142272,"High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis [Xenium]",GSE243168,GSE243168+GSE243280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,,MONDO:0007254,luna,Breast Cancer,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,Breast Cancer Tumor Microenvironment,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.5000120606478291,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38114474,,GSM7780155,,,test,sda-all,samples/GSE243168/GSM7780155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7780296,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2615,Clonal proliferation of smooth muscle cell in human atherosclerosis,GSE243179,GSE243179,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,coronary sample with plaque erosion,MONDO:0005311,luna,atherosclerosis,plaque erosion,age rule: bare number read as years,adult,42,extracted field,female,GSE243179:SI-TS-A1,SI-TS-A1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.302083344088542,platform_constant,4.302083344088542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37881937,,GSM7780296,,,train,hesrt,samples/GSE243179/GSM7780296,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7780297,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1283,Clonal proliferation of smooth muscle cell in human atherosclerosis,GSE243179,GSE243179,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,coronary sample with plaque erosion,MONDO:0005311,luna,atherosclerosis,plaque erosion,age rule: bare number read as years,adult,46,extracted field,female,GSE243179:SI-TS-D1,SI-TS-D1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.279166818149175,platform_constant,4.279166818149175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37881937,,GSM7780297,,,train,hesrt,samples/GSE243179/GSM7780297,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7781044,other,perturbation,,forelimb zeugopod,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Visium,Visium,True,H&E,1089,Multi-species atlas resolves an axolotl limb development and regeneration paradox,GSE243225,GSE243225,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002386,5 dpa regenerating lower arm,,luna,,CZ lower arm amputation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,99088,non-integer,pixel,4.5280104056157375,platform_constant,4.5280104056157375,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37816738,,SS-GSM7781044,same_section_cross_series,GSM9788643,train,hesrt,samples/GSE243225/GSM7781044,sda-tissue-disease-2.4,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM7782699,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,4992,"High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis [scRNA-seq and Visium]",GSE243275,GSE243275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,5 µm section Breast Cancer,MONDO:0007254,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,0.5494173770805822,platform_constant,0.5494173770805822,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38114474,,GSM7782699,,,train,hesrt,samples/GSE243275/GSM7782699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7780153,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,H&E,167780,"High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis",GSE243280,GSE243280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,5 µm section Breast Cancer,MONDO:0007254,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,imaging-based,10x Genomics Xenium In Situ,,,cell,541,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38114474,,GSM7780153,,,train,hesrt,samples/GSE243280/GSM7780153,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7780154,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,H&E,118752,"High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis",GSE243280,GSE243280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,5 µm section Breast Cancer,MONDO:0007254,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,imaging-based,10x Genomics Xenium In Situ,,,cell,541,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38114474,,GSM7780154,,,train,hesrt,samples/GSE243280/GSM7780154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7782914,skeletal muscle,disease,sarcoidosis,skeletal muscle tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2299,Spatial transcriptomics reveal signatures of histopathological changes in muscular sarcoidosis,GSE243291,GSE243291,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001134,muscle,MONDO:0019338,luna,granulomatous myositis associated with multisystemic sarcoidosis,granulomatous myositis associated with multisystemic sarcoidosis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.027631874575545,platform_constant,4.027631874575545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38067175,,GSM7782914,,,train,hesrt,samples/GSE243291/GSM7782914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM7782915,skeletal muscle,disease,sarcoidosis,skeletal muscle tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2723,Spatial transcriptomics reveal signatures of histopathological changes in muscular sarcoidosis,GSE243291,GSE243291,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001134,muscle,MONDO:0019338,luna,granulomatous myositis associated with multisystemic sarcoidosis,granulomatous myositis associated with multisystemic sarcoidosis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.071052512663497,platform_constant,4.071052512663497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38067175,,GSM7782915,,,train,hesrt,samples/GSE243291/GSM7782915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM7784328,liver,disease,hepatitis B virus infection,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1158,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,GSE243367,GSE243367,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005344,luna,HBeAg-negative CHB (EN2) and HBsAg loss (SL1),Untreated (EN2) and on-treatment (SL1),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.096000083886091,platform_constant,4.096000083886091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784328,,,train,hesrt,samples/GSE243367/GSM7784328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM7784329,liver,disease,hepatitis B virus infection,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1928,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,GSE243367,GSE243367,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005344,luna,HBeAg-negative CHB (EN3 and EN4),Untreated (EN2 and EN4),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.1520000724108765,platform_constant,4.1520000724108765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784329,,,train,hesrt,samples/GSE243367/GSM7784329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7784330,liver,disease,hepatitis B virus infection,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1471,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,GSE243367,GSE243367,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005344,luna,HBeAg-positive (EP1) and HBeAg-negative chronic HBV infection(EN1),Untreated (EP1 and EN1),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.12800003434497,platform_constant,4.12800003434497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784330,,,train,hesrt,samples/GSE243367/GSM7784330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7784331,liver,disease,hepatitis B virus infection,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1742,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,GSE243367,GSE243367,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005344,luna,HBeAg-positive CHB (EP2) and HBsAg loss (SL2),Untreated (EP2) and on-treatment (SL2),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.184000107445121,platform_constant,4.184000107445121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784331,,,train,hesrt,samples/GSE243367/GSM7784331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7784332,liver,disease,hepatitis B virus infection,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1274,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,GSE243367,GSE243367,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005344,luna,HBeAg-positive CHB (EP3) and HBeAg-negative CHB (EN5),Untreated (EP3 and EN5),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0065655493499674,platform_constant,4.0065655493499674,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784332,,,train,hesrt,samples/GSE243367/GSM7784332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7784333,liver,disease,hepatitis B virus infection,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2091,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,GSE243367,GSE243367,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005344,luna,HBeAg-positive CHB (EP4) and HBsAg loss (SL3),Untreated (EP4 and SL3),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9517674766106574,platform_constant,3.9517674766106574,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784333,,,train,hesrt,samples/GSE243367/GSM7784333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7784334,liver,disease,hepatitis B virus infection,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1213,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,GSE243367,GSE243367,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005344,luna,HBeAg-positive CHB (OT1) and HBeAg-negative CHB (OT2),On-treatment (OT1 and OT2),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9585860831168653,platform_constant,3.9585860831168653,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784334,,,train,hesrt,samples/GSE243367/GSM7784334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7784335,liver,disease,hepatitis B virus infection,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1872,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,GSE243367,GSE243367,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005344,luna,HBeAg-positive CHB (OT3) and HBeAg-negative CHB (OT4),On-treatment (OT3 and OT4),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.157575699170121,platform_constant,4.157575699170121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784335,,,train,hesrt,samples/GSE243367/GSM7784335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7784336,liver,disease,hepatitis B virus infection,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1574,Spatial transcriptomics reveals a low extent of transcriptionally active hepatitis B virus integration in patients with HBsAg loss,GSE243367,GSE243367,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005344,luna,HBeAg-positive CHB (OT6) and HBeAg-negative CHB (OT5),On-treatment (OT5 and OT6),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0580809109937475,platform_constant,4.0580809109937475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37968095,,GSM7784336,,,train,hesrt,samples/GSE243367/GSM7784336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7697868,liver,normal,,liver,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2378,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,GSE243981,GSE243981,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Adult Liver,,luna,,,luna,adult,30–60,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9119879663623887,platform_constant,3.9119879663623887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7697868,,,train,hesrt,samples/GSE243981/GSM7697868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7697869,liver,normal,,liver,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2349,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,GSE243981,GSE243981,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Adult Liver,,luna,,,luna,adult,30–60,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.927033572384386,platform_constant,3.927033572384386,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7697869,,,train,hesrt,samples/GSE243981/GSM7697869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7697870,liver,normal,,liver,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2277,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,GSE243981,GSE243981,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Adult Liver,,luna,,,luna,adult,30–60,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9568206443315925,platform_constant,3.9568206443315925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7697870,,,train,hesrt,samples/GSE243981/GSM7697870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7804884,skeletal muscle,normal,,diaphragm,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,815,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,GSE244014,GSE244014,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001103,diaphragm E14.5,,luna,,control,age rule: embryonic day,embryonic,14.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.392517514500182,platform_constant,4.392517514500182,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804884,,,val,hesrt,samples/GSE244014/GSM7804884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804885,skeletal muscle,normal,,diaphragm,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,842,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,GSE244014,GSE244014,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001103,diaphragm E14.5,,luna,,control,age rule: embryonic day,embryonic,14.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.392541189910771,platform_constant,4.392541189910771,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804885,,,val,hesrt,samples/GSE244014/GSM7804885,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804886,skeletal muscle,normal,,diaphragm,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,703,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,GSE244014,GSE244014,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001103,diaphragm E14.5,,luna,,control,age rule: embryonic day,embryonic,14.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.525966943520554,platform_constant,4.525966943520554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804886,,,val,hesrt,samples/GSE244014/GSM7804886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804887,skeletal muscle,normal,,diaphragm,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,3478,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,GSE244014,GSE244014,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001103,diaphragm E18.5,,luna,,control,age rule: embryonic day,embryonic,18.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.924658848722915,platform_constant,4.924658848722915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804887,,,val,hesrt,samples/GSE244014/GSM7804887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804888,skeletal muscle,normal,,diaphragm,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,2527,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,GSE244014,GSE244014,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001103,diaphragm E18.5,,luna,,control,age rule: embryonic day,embryonic,18.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.933223912915328,platform_constant,4.933223912915328,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804888,,,val,hesrt,samples/GSE244014/GSM7804888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM7804889,skeletal muscle,perturbation,,diaphragm,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,904,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,GSE244014,GSE244014,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001103,diaphragm E14.5,,luna,,CaV1.1 -/-,age rule: embryonic day,embryonic,14.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.391688413083719,platform_constant,4.391688413083719,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804889,,,val,hesrt,samples/GSE244014/GSM7804889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804890,skeletal muscle,perturbation,,diaphragm,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,1336,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,GSE244014,GSE244014,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001103,diaphragm E18.5,,luna,,CaV1.1 -/-,age rule: embryonic day,embryonic,18.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.530111545340243,platform_constant,4.530111545340243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804890,,,val,hesrt,samples/GSE244014/GSM7804890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7804891,skeletal muscle,perturbation,,diaphragm,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,2166,Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression,GSE244014,GSE244014,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001103,diaphragm E18.5,,luna,,bCat cKO,age rule: embryonic day,embryonic,18.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.531492751773592,platform_constant,4.531492751773592,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38883818,,GSM7804891,,,val,hesrt,samples/GSE244014/GSM7804891,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7806336,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1073,In situ spatial reconstruction of distinct normal and pathological cell populations within the human adrenal gland,GSE244084,GSE244084,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adrenal Gland,,luna,,normal,age rule: age in years,adult,31 years,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4716981132075472,platform_constant,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37953901,,GSM7806336,,,train,hesrt,samples/GSE244084/GSM7806336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7806337,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,739,In situ spatial reconstruction of distinct normal and pathological cell populations within the human adrenal gland,GSE244084,GSE244084,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adrenal Gland,,luna,,normal,age rule: age in years,adult,31 years,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4716981132075472,platform_constant,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37953901,,GSM7806337,,,train,hesrt,samples/GSE244084/GSM7806337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7806338,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1488,In situ spatial reconstruction of distinct normal and pathological cell populations within the human adrenal gland,GSE244084,GSE244084,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adrenal Gland,,luna,,normal,age rule: age in years,adult,31 years,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4716981132075472,platform_constant,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37953901,,GSM7806338,,,train,hesrt,samples/GSE244084/GSM7806338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7806339,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,938,In situ spatial reconstruction of distinct normal and pathological cell populations within the human adrenal gland,GSE244084,GSE244084,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adrenal Gland,,luna,,normal,age rule: age in years,aged,71 years,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4716981132075472,platform_constant,0.49999487067840404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37953901,,GSM7806339,,,train,hesrt,samples/GSE244084/GSM7806339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7818789,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,"fluorescence: single channel, grayscale (heuristic)",4410,Deterministic reprogramming of neutrophils in tumors,GSE244536,GSE244536,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,PDAC tumor,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.031861960080278,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the stain should be stated,38207030,,GSM7818789,,,test,sda-all,samples/GSE244536/GSM7818789,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 0.71}",,
GSM7818790,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,"fluorescence: single channel, grayscale (heuristic)",4653,Deterministic reprogramming of neutrophils in tumors,GSE244536,GSE244536,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,PDAC tumor,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.036343811594965,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),registration is correct; should be marked as non-H&E,38207030,,GSM7818790,,,test,sda-all,samples/GSE244536/GSM7818790,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.6000000000000001, ""life_stage"": 0.74}",organ,low_confidence_annotation
GSM7818791,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),3402,Deterministic reprogramming of neutrophils in tumors,GSE244536,GSE244536,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,PDAC tumor,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.037730886127165,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),registration is correct; the non-H&E modality should be stated,38207030,,GSM7818791,,,test,sda-all,samples/GSE244536/GSM7818791,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM7818792,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,4225,Deterministic reprogramming of neutrophils in tumors,GSE244536,GSE244536,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,PDAC tumor,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,UNSURE,other,very poor image quality,38207030,,GSM7818792,,,test,sda-all,samples/GSE244536/GSM7818792,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 0.9500000000000001}",,
GSM7823010,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1625,Recirculating regulatory T cells mediate thymic regeneration [visium],GSE244641,GSE244641,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,treatment: untreated; time point: day1; age: 02-month old,age rule: age with unit,adult,2 months,not stated,,GSE244641:GSM7823010,GSM7823010,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39892391,,GSM7823010,,,train,hesrt,samples/GSE244641/GSM7823010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM7823011,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,1815,Recirculating regulatory T cells mediate thymic regeneration [visium],GSE244641,GSE244641,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,treatment: untreated; time point: day1; age: 18-month old,age rule: age with unit,aged,18 months,not stated,,GSE244641:GSM7823011,GSM7823011,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39892391,,GSM7823011,,,train,hesrt,samples/GSE244641/GSM7823011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7823012,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),841,Recirculating regulatory T cells mediate thymic regeneration [visium],GSE244641,GSE244641+GSE244674,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,untreated,age rule: age with unit,adult,02-month old,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.079163847879598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39892391,,GSM7823012,,,train,sda-all,samples/GSE244641/GSM7823012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7823013,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,1613,Recirculating regulatory T cells mediate thymic regeneration [visium],GSE244641,GSE244641,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,treatment: untreated; time point: day4; age: 18-month old,age rule: age with unit,aged,18 months,not stated,,GSE244641:GSM7823013,GSM7823013,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39892391,,GSM7823013,,,train,hesrt,samples/GSE244641/GSM7823013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7823014,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1612,Recirculating regulatory T cells mediate thymic regeneration [visium],GSE244641,GSE244641,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,treatment: untreated; time point: day7; age: 02-month old,age rule: age with unit,adult,2 months,not stated,,GSE244641:GSM7823014,GSM7823014,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39892391,,GSM7823014,,,train,hesrt,samples/GSE244641/GSM7823014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM7823015,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E,1443,Recirculating regulatory T cells mediate thymic regeneration [visium],GSE244641,GSE244641,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002370,thymus,,luna,,treatment: untreated; time point: day7; age: 18-month old,age rule: age with unit,aged,18 months,not stated,,GSE244641:GSM7823015,GSM7823015,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.970873786407767,platform_constant,0.970873786407767,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39892391,,GSM7823015,,,train,hesrt,samples/GSE244641/GSM7823015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7823248,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1243,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Apex resection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.4659375412662524,platform_constant,0.5000044359891271,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823248,,,train,hesrt,samples/GSE244650/GSM7823248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM7823249,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1035,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Wild type,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.4673690398864138,platform_constant,0.4999942354791313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823249,,,train,hesrt,samples/GSE244650/GSM7823249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7823250,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1290,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Apex resection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.467439281380087,platform_constant,0.49999422517116493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823250,,,train,hesrt,samples/GSE244650/GSM7823250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM7823251,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1616,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Apex resection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.4672122667052516,platform_constant,0.49998595588176503,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823251,,,train,hesrt,samples/GSE244650/GSM7823251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7823252,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1642,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Apex resection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.4656404298486533,platform_constant,0.5000028126831603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823252,,,train,hesrt,samples/GSE244650/GSM7823252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.89}",,
GSM7823253,heart,normal,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2146,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Sham,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.46824394478694786,platform_constant,0.49999813383161945,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823253,,,train,hesrt,samples/GSE244650/GSM7823253,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7823254,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1225,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Apex resection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.46685329959823757,platform_constant,0.5000040424593418,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823254,,,train,hesrt,samples/GSE244650/GSM7823254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7823255,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1312,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Apex resection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.47341307049202275,platform_constant,0.5000027404461999,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823255,,,train,hesrt,samples/GSE244650/GSM7823255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM7823256,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1053,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Apex resection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.46836746365911786,platform_constant,0.4999942315294803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823256,,,train,hesrt,samples/GSE244650/GSM7823256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM7823257,heart,normal,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,913,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Sham,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.4676297604809965,platform_constant,0.5000150100322324,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823257,,,train,hesrt,samples/GSE244650/GSM7823257,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7823258,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1009,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Wild type,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.46709242349140306,platform_constant,0.49999807478060887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823258,,,train,hesrt,samples/GSE244650/GSM7823258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM7823259,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1431,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Apex resection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.471669192002209,platform_constant,0.499997217087131,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823259,,,train,hesrt,samples/GSE244650/GSM7823259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM7823260,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1626,Targeting lysozyme 2 in endocardium promotes rapid recovery by modulating remote injury signals,GSE244650,GSE244650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Apex resection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,0.46794545208201044,platform_constant,0.5000099095406314,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967223,,GSM7823260,,,train,hesrt,samples/GSE244650/GSM7823260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM7823491,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Other,Pixel-seq,False,,59200,A diverse network of pericoerulear neurons control arousal states,GSE244659,GSE244659,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Mouse brain LC region,,luna,,wildtype,luna,not stated,,extracted field,female,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,other,,,cell,27561,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40335695,,GSM7823491,,,train,sda-all,samples/GSE244659/GSM7823491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM7823492,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Other,Pixel-seq,False,,17963,A diverse network of pericoerulear neurons control arousal states,GSE244659,GSE244659,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Mouse brain LC region,,luna,,wildtype,luna,not stated,,extracted field,male,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,other,,,cell,27561,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40335695,,GSM7823492,,,train,sda-all,samples/GSE244659/GSM7823492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM7829909,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,42666,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],GSE244803,GSE244803,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,,luna,,saline control,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,22019,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,38848213,,GSM7829909,,,train,sda-all,samples/GSE244803/GSM7829909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM7829910,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,45840,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],GSE244803,GSE244803,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,,luna,,saline control,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,22555,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,38848213,,GSM7829910,,,train,sda-all,samples/GSE244803/GSM7829910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM7829911,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,50181,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],GSE244803,GSE244803,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,,luna,,saline control,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,22455,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,38848213,,GSM7829911,,,train,sda-all,samples/GSE244803/GSM7829911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM7829912,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,46304,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],GSE244803,GSE244803,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,,luna,,saline control,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,22195,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,38848213,,GSM7829912,,,train,sda-all,samples/GSE244803/GSM7829912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM7829913,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,37750,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],GSE244803,GSE244803,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,MONDO:0005136,luna,,P chabaudi infected,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,25727,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,38848213,,GSM7829913,,,train,sda-all,samples/GSE244803/GSM7829913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM7829914,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,47385,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],GSE244803,GSE244803,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,MONDO:0005136,luna,,P chabaudi infected,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,25795,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,38848213,,GSM7829914,,,train,sda-all,samples/GSE244803/GSM7829914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM7829915,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,49514,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],GSE244803,GSE244803,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,MONDO:0005136,luna,,P chabaudi infected,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,26043,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,38848213,,GSM7829915,,,train,sda-all,samples/GSE244803/GSM7829915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM7829916,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seqV2,False,,46705,Spatial transcriptomics of mouse spleens during steady state and malaria infection. [d0_d7_slideseqV2],GSE244803,GSE244803,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,MONDO:0005136,luna,,P chabaudi infected,age rule: age with unit,juvenile,6-12 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,25078,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,38848213,,GSM7829916,,,train,sda-all,samples/GSE244803/GSM7829916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM7836297,other,perturbation,,tendon,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3047,Spatial transcriptomics of the achilles tendon harvested from the injury site with and without TrkA neuronal inhibition,GSE245097,GSE245097+GSE245179,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000043,Tendon + injured area,,luna,,Control (TrkA WT),age rule: age with unit,adult,12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,18.287499981712457,platform_constant,18.287499981712457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38117901,,GSM7836297,,,train,hesrt,samples/GSE245097/GSM7836297,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836298,other,disease,,tendon,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2027,Spatial transcriptomics of the achilles tendon harvested from the injury site with and without TrkA neuronal inhibition,GSE245097,GSE245097+GSE245179,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000043,Tendon + injured area,,luna,,Control (TrkA WT),age rule: age with unit,adult,12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,18.287499981712457,platform_constant,18.287499981712457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38117901,,GSM7836298,,,train,hesrt,samples/GSE245097/GSM7836298,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM7836299,other,perturbation,,tendon,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2837,Spatial transcriptomics of the achilles tendon harvested from the injury site with and without TrkA neuronal inhibition,GSE245097,GSE245097+GSE245179,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000043,Tendon + injured area,,luna,,1NMPP1 (TrkA F592A),age rule: age with unit,adult,12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,18.287499981712457,platform_constant,18.287499981712457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38117901,,GSM7836299,,,train,hesrt,samples/GSE245097/GSM7836299,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836300,other,perturbation,,tendon,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2751,Spatial transcriptomics of the achilles tendon harvested from the injury site with and without TrkA neuronal inhibition,GSE245097,GSE245097+GSE245179,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000043,Tendon + injured area,,luna,,1NMPP1 (TrkA F592A),age rule: age with unit,adult,12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,18.287499981712482,platform_constant,18.287499981712482,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38117901,,GSM7836300,,,train,hesrt,samples/GSE245097/GSM7836300,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836929,lymph node,perturbation,,mediastinal lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,39721,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen [Curio],GSE245111,GSE245111+GSE245112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002524,Mediastinal lymph node,,luna,,House dust mite intranasal,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,slide_seq,,,bead,24649,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38374265,,GSM7836929,,,train,sda-all,samples/GSE245111/GSM7836929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836930,lymph node,disease,,mediastinal lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,30242,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen [Curio],GSE245111,GSE245111+GSE245112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002524,Mediastinal lymph node,,luna,,House dust mite intranasal,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,slide_seq,,,bead,25343,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38374265,,GSM7836930,,,train,sda-all,samples/GSE245111/GSM7836930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836931,lymph node,perturbation,,mediastinal lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,55186,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen [Curio],GSE245111,GSE245111+GSE245112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002524,Mediastinal lymph node,,luna,,House dust mite intranasal,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,slide_seq,,,bead,22391,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38374265,,GSM7836931,,,train,sda-all,samples/GSE245111/GSM7836931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7836932,lymph node,disease,,mediastinal lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,51705,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen [Curio],GSE245111,GSE245111+GSE245112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002524,Mediastinal lymph node,,luna,,House dust mite intranasal,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,slide_seq,,,bead,23405,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38374265,,GSM7836932,,,train,sda-all,samples/GSE245111/GSM7836932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836925,lymph node,perturbation,,mediastinal lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,657,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen,GSE245112,GSE245112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002524,mediastinal lymph node,,luna,,House Dust Mite intranasal,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.446494575753199,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific stain should be stated,38374265,,GSM7836925,,,train,sda-all,samples/GSE245112/GSM7836925,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836926,lymph node,perturbation,,mediastinal lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,582,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen,GSE245112,GSE245112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002524,mediastinal lymph node,,luna,,House Dust Mite intranasal,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.450924709168884,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific stain should be stated,38374265,,GSM7836926,,,train,sda-all,samples/GSE245112/GSM7836926,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836927,lymph node,perturbation,,mediastinal lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,621,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen,GSE245112,GSE245112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002524,mediastinal lymph node,,luna,,House Dust Mite intranasal,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.4460830472134925,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific stain should be stated,38374265,,GSM7836927,,,train,sda-all,samples/GSE245112/GSM7836927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7836928,lymph node,perturbation,,mediastinal lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,885,Spatial microniches of IL-2 synergize with IL-10 to drive lung migratory Th2 cells in response to inhaled allergen,GSE245112,GSE245112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002524,mediastinal lymph node,,luna,,House Dust Mite intranasal,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.451862933083515,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific stain should be stated,38374265,,GSM7836928,,,train,sda-all,samples/GSE245112/GSM7836928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7839621,brain,disease,neoplasm,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2158,Spatial transcriptomics of brains from tumor-bearing C57BL/6 mice,GSE245263,GSE245263,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0005070,luna,,Control 28d,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32272,counts,pixel,0.3460124757047214,platform_constant,0.5000049285355638,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1101/2023.10.26.564166v1,GSM7839621,,,train,hesrt,samples/GSE245263/GSM7839621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.34, ""disease_status"": 0.48, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM7840102,small intestine,normal,,duodenum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3067,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002114,Duodenum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431938,platform_constant,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840102,,,val,hesrt,samples/GSE245274/GSM7840102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840103,small intestine,normal,,duodenum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3268,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002114,Duodenum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840103,,,val,hesrt,samples/GSE245274/GSM7840103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840104,small intestine,normal,,duodenum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3724,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002114,Duodenum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492008841412778,platform_constant,5.492008841412778,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840104,,,val,hesrt,samples/GSE245274/GSM7840104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840105,small intestine,normal,,duodenum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4039,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002114,Duodenum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840105,,,val,hesrt,samples/GSE245274/GSM7840105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840106,small intestine,normal,,duodenum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3779,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002114,Duodenum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840106,,,val,hesrt,samples/GSE245274/GSM7840106,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840107,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3795,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.4920417193261155,platform_constant,5.4920417193261155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840107,,,val,hesrt,samples/GSE245274/GSM7840107,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840108,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3049,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.4920417193261155,platform_constant,5.4920417193261155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840108,,,val,hesrt,samples/GSE245274/GSM7840108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840109,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3616,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840109,,,val,hesrt,samples/GSE245274/GSM7840109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7840110,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4639,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840110,,,val,hesrt,samples/GSE245274/GSM7840110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840111,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2761,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326132,platform_constant,5.492041719326132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840111,,,val,hesrt,samples/GSE245274/GSM7840111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840112,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2578,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840112,,,val,hesrt,samples/GSE245274/GSM7840112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840113,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2964,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.475513139933125,platform_constant,5.475513139933125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840113,,,val,hesrt,samples/GSE245274/GSM7840113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840114,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4427,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.475513139933188,platform_constant,5.475513139933188,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840114,,,val,hesrt,samples/GSE245274/GSM7840114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840115,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4414,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492008841412744,platform_constant,5.492008841412744,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840115,,,val,hesrt,samples/GSE245274/GSM7840115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840116,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2567,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840116,,,val,hesrt,samples/GSE245274/GSM7840116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840117,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2816,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840117,,,val,hesrt,samples/GSE245274/GSM7840117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840118,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3354,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840118,,,val,hesrt,samples/GSE245274/GSM7840118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840119,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2930,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326132,platform_constant,5.492041719326132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840119,,,val,hesrt,samples/GSE245274/GSM7840119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840120,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3153,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.4920417193261155,platform_constant,5.4920417193261155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840120,,,val,hesrt,samples/GSE245274/GSM7840120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840121,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2568,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492008841412778,platform_constant,5.492008841412778,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840121,,,val,hesrt,samples/GSE245274/GSM7840121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840122,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2691,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492008841412744,platform_constant,5.492008841412744,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840122,,,val,hesrt,samples/GSE245274/GSM7840122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840123,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2434,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326132,platform_constant,5.492041719326132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840123,,,val,hesrt,samples/GSE245274/GSM7840123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7840124,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1765,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326132,platform_constant,5.492041719326132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840124,,,val,hesrt,samples/GSE245274/GSM7840124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840125,colon,perturbation,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2625,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,FMT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431938,platform_constant,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840125,,,val,hesrt,samples/GSE245274/GSM7840125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840126,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2882,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.475513139933142,platform_constant,5.475513139933142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840126,,,val,hesrt,samples/GSE245274/GSM7840126,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7840127,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2181,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840127,,,val,hesrt,samples/GSE245274/GSM7840127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840128,small intestine,perturbation,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4389,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,FMT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431938,platform_constant,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840128,,,val,hesrt,samples/GSE245274/GSM7840128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840129,small intestine,perturbation,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3719,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,FMT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431904,platform_constant,5.473103644431904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840129,,,val,hesrt,samples/GSE245274/GSM7840129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840130,small intestine,perturbation,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3323,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,FMT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431938,platform_constant,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840130,,,val,hesrt,samples/GSE245274/GSM7840130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840131,small intestine,perturbation,,duodenum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3622,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002114,Duodenum,,luna,,FMT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431938,platform_constant,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840131,,,val,hesrt,samples/GSE245274/GSM7840131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7840132,small intestine,perturbation,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3528,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,FMT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431938,platform_constant,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840132,,,val,hesrt,samples/GSE245274/GSM7840132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840133,small intestine,perturbation,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3696,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,FMT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431938,platform_constant,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840133,,,val,hesrt,samples/GSE245274/GSM7840133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840134,small intestine,perturbation,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2817,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,FMT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.511111308629315,platform_constant,5.511111308629315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840134,,,val,hesrt,samples/GSE245274/GSM7840134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7840135,small intestine,perturbation,,duodenum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2511,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002114,Duodenum,,luna,,FMT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431938,platform_constant,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840135,,,val,hesrt,samples/GSE245274/GSM7840135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840136,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4141,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.511111308629315,platform_constant,5.511111308629315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840136,,,val,hesrt,samples/GSE245274/GSM7840136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840137,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3431,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431938,platform_constant,5.473103644431938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840137,,,val,hesrt,samples/GSE245274/GSM7840137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840138,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3378,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431904,platform_constant,5.473103644431904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840138,,,val,hesrt,samples/GSE245274/GSM7840138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840139,small intestine,normal,,duodenum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4096,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002114,Duodenum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431904,platform_constant,5.473103644431904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840139,,,val,hesrt,samples/GSE245274/GSM7840139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840140,small intestine,normal,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3868,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.511111308629315,platform_constant,5.511111308629315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840140,,,val,hesrt,samples/GSE245274/GSM7840140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840141,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3450,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.511111308629315,platform_constant,5.511111308629315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840141,,,val,hesrt,samples/GSE245274/GSM7840141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840142,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2250,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.473103644431904,platform_constant,5.473103644431904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840142,,,val,hesrt,samples/GSE245274/GSM7840142,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840143,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2921,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.5109784259136525,platform_constant,5.5109784259136525,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840143,,,val,hesrt,samples/GSE245274/GSM7840143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7840144,colon,disease,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3442,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840144,,,val,hesrt,samples/GSE245274/GSM7840144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7840145,colon,disease,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3575,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840145,,,val,hesrt,samples/GSE245274/GSM7840145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7840146,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2924,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840146,,,val,hesrt,samples/GSE245274/GSM7840146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7840147,colon,disease,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3514,Spatially restricted immune and microbiota-driven adaptation of the gut [Spatial Transcriptomics],GSE245274,GSE245274+GSE245316,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.492041719326099,platform_constant,5.492041719326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567686,,GSM7840147,,,val,hesrt,samples/GSE245274/GSM7840147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7840724,other,perturbation,,tail,primary tissue,Xenopus laevis,African clawed frog,not stated,unknown,Visium,Visium,True,H&E,1805,Characterization of regeneration initiating cells during Xenopus laevis tail regeneration [spatial transcriptomics],GSE245313,GSE245313+GSE245320,8355,Xenopus laevis,8355,,False,False,GEO organism field,Xenopus laevis,,luna,UBERON:0002415,tail,,luna,,amputated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,44478,counts,pixel,4.527779653363857,platform_constant,4.527779653363857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39350302,,GSM7840724,,,train,hesrt,samples/GSE245313/GSM7840724,sda-tissue-disease-2.4,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7840725,other,perturbation,,tail,primary tissue,Xenopus laevis,African clawed frog,not stated,unknown,Visium,Visium,True,H&E,1267,Characterization of regeneration initiating cells during Xenopus laevis tail regeneration [spatial transcriptomics],GSE245313,GSE245313+GSE245320,8355,Xenopus laevis,8355,,False,False,GEO organism field,Xenopus laevis,,luna,UBERON:0002415,tail,,luna,,amputated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,44478,counts,pixel,4.527898528605814,platform_constant,4.527898528605814,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39350302,,GSM7840725,,,train,hesrt,samples/GSE245313/GSM7840725,sda-tissue-disease-2.4,"{""organ"": 0.85, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7840726,other,perturbation,,tail,primary tissue,Xenopus laevis,African clawed frog,not stated,unknown,Visium,Visium,True,H&E,2123,Characterization of regeneration initiating cells during Xenopus laevis tail regeneration [spatial transcriptomics],GSE245313,GSE245313+GSE245320,8355,Xenopus laevis,8355,,False,False,GEO organism field,Xenopus laevis,,luna,UBERON:0002415,tail,,luna,,amputated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,44478,counts,pixel,4.531211792132464,platform_constant,4.531211792132464,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39350302,,GSM7840726,,,train,hesrt,samples/GSE245313/GSM7840726,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7841727,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,64,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,GSE245388,GSE245388+GSE245389,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostate cancer,MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.246753212779202,platform_constant,4.246753212779202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841727,,,train,hesrt,samples/GSE245388/GSM7841727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7841728,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,130,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,GSE245388,GSE245388+GSE245389,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostate cancer,MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.250649277113107,platform_constant,4.250649277113107,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841728,,,train,hesrt,samples/GSE245388/GSM7841728,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7841729,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,235,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,GSE245388,GSE245388+GSE245389,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostate cancer,MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.248052033437787,platform_constant,4.248052033437787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841729,,,train,hesrt,samples/GSE245388/GSM7841729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7841730,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,149,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,GSE245388,GSE245388+GSE245389,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostate cancer,MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.246753212779202,platform_constant,4.246753212779202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841730,,,train,hesrt,samples/GSE245388/GSM7841730,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7841731,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,444,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,GSE245388,GSE245388+GSE245389,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostate cancer,MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.248052033437787,platform_constant,4.248052033437787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841731,,,train,hesrt,samples/GSE245388/GSM7841731,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7841732,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,99,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,GSE245388,GSE245388+GSE245389,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostate cancer,MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.248052033437787,platform_constant,4.248052033437787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841732,,,train,hesrt,samples/GSE245388/GSM7841732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7841733,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,498,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,GSE245388,GSE245388+GSE245389,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostate cancer,MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.248052033437787,platform_constant,4.248052033437787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841733,,,train,hesrt,samples/GSE245388/GSM7841733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7841734,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,302,Spatial transcriptomics reveals unexpected histological heterogeneity in primary prostate,GSE245388,GSE245388+GSE245389,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostate cancer,MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.250649277113107,platform_constant,4.250649277113107,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38569039,,GSM7841734,,,train,hesrt,samples/GSE245388/GSM7841734,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7843143,head and neck,normal,,head,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,1106,Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis [Spatial Transcriptomics],GSE245469,GSE205449+GSE245469,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000033,Whole head,,luna,,Wild-type,luna,embryonic,14.5 days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.600000180991986,platform_constant,5.600000180991986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37709732,,GSM7843143,,,train,hesrt,samples/GSE245469/GSM7843143,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7843144,head and neck,normal,,head,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,2310,Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis [Spatial Transcriptomics],GSE245469,GSE205449+GSE245469,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000033,Whole head,,luna,,Wild-type,luna,embryonic,14.5 days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.208333375416684,platform_constant,4.208333375416684,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37709732,,GSM7843144,,,train,hesrt,samples/GSE245469/GSM7843144,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.8200000000000001, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7843145,head and neck,normal,,head,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,989,Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis [Spatial Transcriptomics],GSE245469,GSE205449+GSE245469,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000033,Whole head,,luna,,Wild-type,luna,embryonic,15.5 days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.600000180991986,platform_constant,5.600000180991986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37709732,,GSM7843145,,,train,hesrt,samples/GSE245469/GSM7843145,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7843146,head and neck,normal,,head,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,1952,Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis [Spatial Transcriptomics],GSE245469,GSE205449+GSE245469,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000033,Whole head,,luna,,Wild-type,luna,embryonic,15.5 days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.095348627527462,platform_constant,4.095348627527462,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37709732,,GSM7843146,,,train,hesrt,samples/GSE245469/GSM7843146,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7845285,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,991,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,TC vehicle,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.03355418778956,platform_constant,4.03355418778956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845285,,,test,hesrt,samples/GSE245582/GSM7845285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845286,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1237,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,TC vehicle,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.0971302690472395,platform_constant,4.0971302690472395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845286,,,test,hesrt,samples/GSE245582/GSM7845286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845287,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2692,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,T0 untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.04061788949363,platform_constant,4.04061788949363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845287,,,test,hesrt,samples/GSE245582/GSM7845287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845288,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2493,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,T0 untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.061810310498913,platform_constant,4.061810310498913,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845288,,,test,hesrt,samples/GSE245582/GSM7845288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845289,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,288,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,T1 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.03355418778956,platform_constant,4.03355418778956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845289,,,test,hesrt,samples/GSE245582/GSM7845289,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845290,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,314,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,T1 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.019425893704678,platform_constant,4.019425893704678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845290,,,test,hesrt,samples/GSE245582/GSM7845290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845291,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,790,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,T2 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.005298045800094,platform_constant,4.005298045800094,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845291,,,test,hesrt,samples/GSE245582/GSM7845291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845292,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,814,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,T2 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.047681957038974,platform_constant,4.047681957038974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845292,,,test,hesrt,samples/GSE245582/GSM7845292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845293,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1134,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,T3 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.04061788949363,platform_constant,4.04061788949363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845293,,,test,hesrt,samples/GSE245582/GSM7845293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.91}",,
GSM7845294,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,998,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,T3 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.026490169303306,platform_constant,4.026490169303306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845294,,,test,hesrt,samples/GSE245582/GSM7845294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.98}",,
GSM7845295,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1625,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,T4 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.026490169303315,platform_constant,4.026490169303315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845295,,,test,hesrt,samples/GSE245582/GSM7845295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.97}",,
GSM7845296,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1986,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4237-1 melanoma PDX,MONDO:0005105,luna,melanoma,T4 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.047681957038974,platform_constant,4.047681957038974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845296,,,test,hesrt,samples/GSE245582/GSM7845296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845297,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1580,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,TC vehicle,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.032891797361193,platform_constant,4.032891797361193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845297,,,test,hesrt,samples/GSE245582/GSM7845297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845298,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1843,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,TC vehicle,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.022074984962202,platform_constant,4.022074984962202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845298,,,test,hesrt,samples/GSE245582/GSM7845298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845299,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1661,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,T0 untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.050110425574239,platform_constant,4.050110425574239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845299,,,test,hesrt,samples/GSE245582/GSM7845299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845300,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1293,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,T0 untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.04922732638084,platform_constant,4.04922732638084,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845300,,,test,hesrt,samples/GSE245582/GSM7845300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.98}",,
GSM7845301,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1044,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,T1 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.0331123980648975,platform_constant,4.0331123980648975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845301,,,test,hesrt,samples/GSE245582/GSM7845301,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845302,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1103,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,T1 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.032891797361193,platform_constant,4.032891797361193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845302,,,test,hesrt,samples/GSE245582/GSM7845302,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845303,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1175,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,T2 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.028145744980908,platform_constant,4.028145744980908,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845303,,,test,hesrt,samples/GSE245582/GSM7845303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845304,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1134,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,T2 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.0945917112683246,platform_constant,4.0945917112683246,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845304,,,test,hesrt,samples/GSE245582/GSM7845304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7845305,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1935,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,T3 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.046026527358457,platform_constant,4.046026527358457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845305,,,test,hesrt,samples/GSE245582/GSM7845305,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845306,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1808,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,T3 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.046909343671223,platform_constant,4.046909343671223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845306,,,test,hesrt,samples/GSE245582/GSM7845306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM7845307,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1574,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,T4 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.0820089143155585,platform_constant,4.0820089143155585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845307,,,test,hesrt,samples/GSE245582/GSM7845307,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.98}",,
GSM7845308,other,disease,melanoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1960,Spatiotemporal profiling defines persistence and resistance dynamics during targeted treatment of BRAF-mutant melanoma,GSE245582,GSE245582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,WM4007 melanoma PDX,MONDO:0005105,luna,melanoma,T4 dabrafenib/trametinib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.094260450555226,platform_constant,4.094260450555226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39700408,10.1158/0008-5472.can-24-0690,GSM7845308,,,test,hesrt,samples/GSE245582/GSM7845308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.9500000000000001}",,
GSM7845914,liver,disease,primary sclerosing cholangitis;liver disorder,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3118,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,GSE245620,GSE245620,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Adult Liver,MONDO:0013433;MONDO:0005154,luna,Primary sclerosing cholangitis (PSC),,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.303951367781155,platform_constant,0.5000052358599784,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7845914,,,train,hesrt,samples/GSE245620/GSM7845914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.97}",,
GSM7845915,liver,disease,primary sclerosing cholangitis;liver disorder,liver,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,2670,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,GSE245620,GSE245620,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Adult Liver,MONDO:0013433;MONDO:0005154,luna,Primary sclerosing cholangitis (PSC),,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.30303030303030304,platform_constant,0.500000955148153,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7845915,,,train,hesrt,samples/GSE245620/GSM7845915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM7845916,liver,disease,primary sclerosing cholangitis;liver disorder,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3322,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,GSE245620,GSE245620,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Adult Liver,MONDO:0013433;MONDO:0005154,luna,Primary sclerosing cholangitis (PSC),,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.303951367781155,platform_constant,0.5000054253234683,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7845916,,,train,hesrt,samples/GSE245620/GSM7845916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.76}",,
GSM7845917,liver,disease,primary sclerosing cholangitis;liver disorder,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3174,Single-cell and spatial transcriptomics characterisation of the immunological landscape in the healthy and PSC human liver,GSE245620,GSE245620,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Adult Liver,MONDO:0013433;MONDO:0005154,luna,Primary sclerosing cholangitis (PSC),,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.303951367781155,platform_constant,0.49998875101574514,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38199298,,GSM7845917,,,train,hesrt,samples/GSE245620/GSM7845917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.9500000000000001}",,
GSM7847146,stomach,disease,gastric adenocarcinoma,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2560,Spatial transcriptomic analysis of Gastric adenocarcinoma,GSE245704,GSE245704,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric adenocarcinoma,MONDO:0005036,luna,Gastric adenocarcinoma,,luna,not stated,,not stated,,GSE245704:GA48269,GA48269,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,14.449842842140209,platform_constant,14.449842842140209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39021298,,GSM7847146,,,train,hesrt,samples/GSE245704/GSM7847146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7850822,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2261,Identification of TREM1+CD163+ myeloid cells as a deleterious immune subset in HCC [Spatial Transcriptomics],GSE245908,GSE245908+GSE245909,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Hepatocellular Carcinoma,MONDO:0007256,luna,hepatocellular carcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.66727241874641,platform_constant,5.66727241874641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38350444;41270217,,GSM7850822,,,train,hesrt,samples/GSE245908/GSM7850822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7850823,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1987,Identification of TREM1+CD163+ myeloid cells as a deleterious immune subset in HCC [Spatial Transcriptomics],GSE245908,GSE245908+GSE245909,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Hepatocellular Carcinoma,MONDO:0007256,luna,hepatocellular carcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.8763632677981406,platform_constant,5.8763632677981406,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38350444;41270217,,GSM7850823,,,train,hesrt,samples/GSE245908/GSM7850823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7869821,uterus,normal,,uterus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1334,Spatial transcriptomics in human mid luteal endometrial biopsies,GSE246495,GSE246495,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000995,Endometrial biopsy,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9634616084166336,platform_constant,3.9634616084166336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869821,,,train,hesrt,samples/GSE246495/GSM7869821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7869822,uterus,not stated,,uterus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1342,Spatial transcriptomics in human mid luteal endometrial biopsies,GSE246495,GSE246495,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000995,Endometrial biopsy,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9615384060769183,platform_constant,3.9615384060769183,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869822,,,train,hesrt,samples/GSE246495/GSM7869822,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7869823,uterus,normal,,uterus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1268,Spatial transcriptomics in human mid luteal endometrial biopsies,GSE246495,GSE246495,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000995,Endometrial biopsy,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9615384060769183,platform_constant,3.9615384060769183,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869823,,,train,hesrt,samples/GSE246495/GSM7869823,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM7869824,uterus,normal,,uterus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2169,Spatial transcriptomics in human mid luteal endometrial biopsies,GSE246495,GSE246495,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000995,Endometrial biopsy,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9615384060769183,platform_constant,3.9615384060769183,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869824,,,train,hesrt,samples/GSE246495/GSM7869824,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7869825,uterus,normal,,uterus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2659,Spatial transcriptomics in human mid luteal endometrial biopsies,GSE246495,GSE246495,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000995,Endometrial biopsy,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.428906345000082,platform_constant,4.428906345000082,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869825,,,train,hesrt,samples/GSE246495/GSM7869825,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7869826,uterus,normal,,uterus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3029,Spatial transcriptomics in human mid luteal endometrial biopsies,GSE246495,GSE246495,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000995,Endometrial biopsy,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.515734082207103,platform_constant,4.515734082207103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869826,,,train,hesrt,samples/GSE246495/GSM7869826,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7869827,uterus,normal,,uterus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2971,Spatial transcriptomics in human mid luteal endometrial biopsies,GSE246495,GSE246495,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000995,Endometrial biopsy,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.499206445714333,platform_constant,4.499206445714333,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869827,,,train,hesrt,samples/GSE246495/GSM7869827,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7869828,uterus,normal,,uterus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2761,Spatial transcriptomics in human mid luteal endometrial biopsies,GSE246495,GSE246495,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000995,Endometrial biopsy,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.515734082207063,platform_constant,4.515734082207063,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40561039,,GSM7869828,,,train,hesrt,samples/GSE246495/GSM7869828,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM7870036,breast,disease,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,False,,3340,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,BRCA2,luna,not stated,,extracted field,female,GSE246518:0259,0259,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870036,,,train,sda-all,samples/GSE246518/GSM7870036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7870037,breast,disease,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,False,,3601,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,BRCA2,luna,not stated,,extracted field,female,GSE246518:0259,0259,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870037,,,train,sda-all,samples/GSE246518/GSM7870037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7870038,breast,normal,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,False,,1828,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,BRCA2,luna,not stated,,extracted field,female,GSE246518:0011,0011,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870038,,,train,sda-all,samples/GSE246518/GSM7870038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.08, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7870039,breast,disease,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1306,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,BRCA2,luna,not stated,,extracted field,female,GSE246518:patient_1218,patient_1218,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,13.282759668653625,platform_constant,13.282759668653625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38216737,10.1038/s41556-023-01315-5,GSM7870039,,,train,hesrt,samples/GSE246518/GSM7870039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7870040,breast,normal,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,False,,3736,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,BRCA2,luna,not stated,,extracted field,female,GSE246518:210727,210727,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870040,,,train,sda-all,samples/GSE246518/GSM7870040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.16, ""uberon"": 0.97, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7870041,breast,disease,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,3617,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,BRCA2,luna,not stated,,extracted field,female,GSE246518:patient_0006,patient_0006,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,15.174017668690784,platform_constant,15.174017668690784,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38216737,10.1038/s41556-023-01315-5,GSM7870041,,,train,hesrt,samples/GSE246518/GSM7870041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.24, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7870042,breast,normal,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,False,,3305,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,Normal,luna,not stated,,extracted field,female,GSE246518:0059,0059,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870042,,,train,sda-all,samples/GSE246518/GSM7870042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7870043,breast,normal,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,False,,3751,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,Normal,luna,not stated,,extracted field,female,GSE246518:0131,0131,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870043,,,train,sda-all,samples/GSE246518/GSM7870043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7870044,breast,normal,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,2246,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,Normal,luna,not stated,,extracted field,female,GSE246518:patient_0409,patient_0409,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,15.527950310559012,platform_constant,15.527950310559012,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38216737,10.1038/s41556-023-01315-5,GSM7870044,,,train,hesrt,samples/GSE246518/GSM7870044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7870045,breast,normal,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,2639,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,Normal,luna,not stated,,extracted field,female,GSE246518:patient_0179,patient_0179,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,15.527950310559012,platform_constant,15.527950310559012,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38216737,10.1038/s41556-023-01315-5,GSM7870045,,,train,hesrt,samples/GSE246518/GSM7870045,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7870046,breast,normal,,mammary gland,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,False,,645,Spatial transcriptomics sequencing profiles of human breast tissue,GSE246518,GSE246518,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001911,Mammary gland,,luna,,Normal,luna,not stated,,extracted field,female,GSE246518:0179,0179,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,38216737,,GSM7870046,,,train,sda-all,samples/GSE246518/GSM7870046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7871985,brain,disease,"glioma;nervous system disorder, non-human animal",brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,268046,Ataxia-telangiectasia mutated (Atm) disruption sensitizes spatially-directed H3.3K27M/TP53 diffuse midline gliomas to radiation therapy,GSE246584,GSE246584,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Primary p53/H3.3K27M diffuse midline glioma-bearing mouse brain,MONDO:0021042;MONDO:1011336,luna,,NestinTVA; p53FL/FL; H3f3aloxP-Stop-loxP-K27M-Tag/+;AtmFL/+,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999925222033039,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,37904990,,GSM7871985,,,train,sda-all,samples/GSE246584/GSM7871985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7871986,brain,disease,"glioma;nervous system disorder, non-human animal",brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,275571,Ataxia-telangiectasia mutated (Atm) disruption sensitizes spatially-directed H3.3K27M/TP53 diffuse midline gliomas to radiation therapy,GSE246584,GSE246584,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Primary p53/H3.3K27M diffuse midline glioma-bearing mouse brain,MONDO:0021042;MONDO:1011336,luna,,10 Gy x 3 focal brain irradiation,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000027250926531,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,37904990,,GSM7871986,,,train,sda-all,samples/GSE246584/GSM7871986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7871987,brain,disease,"glioma;nervous system disorder, non-human animal",brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,201816,Ataxia-telangiectasia mutated (Atm) disruption sensitizes spatially-directed H3.3K27M/TP53 diffuse midline gliomas to radiation therapy,GSE246584,GSE246584,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Primary p53/H3.3K27M diffuse midline glioma-bearing mouse brain,MONDO:0021042;MONDO:1011336,luna,,NestinTVA; p53FL/FL; H3f3aloxP-Stop-loxP-K27M-Tag/+;AtmFL/FL,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999925222033039,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,37904990,,GSM7871987,,,train,sda-all,samples/GSE246584/GSM7871987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7871988,brain,disease,"glioma;nervous system disorder, non-human animal",brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,44941,Ataxia-telangiectasia mutated (Atm) disruption sensitizes spatially-directed H3.3K27M/TP53 diffuse midline gliomas to radiation therapy,GSE246584,GSE246584,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Primary p53/H3.3K27M diffuse midline glioma-bearing mouse brain,MONDO:0021042;MONDO:1011336,luna,,10 Gy x 3 focal brain irradiation,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999173143707626,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,37904990,,GSM7871988,,,train,sda-all,samples/GSE246584/GSM7871988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7876407,prostate,disease,neoplasm,prostate gland,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1048,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,GSE246770,GSE246762+GSE246770,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,MONDO:0005070,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,39394434,,GSM7876407,,,train,sda-all,samples/GSE246770/GSM7876407,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.84, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM7876408,prostate,disease,neoplasm,prostate gland,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1044,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,GSE246770,GSE246762+GSE246770,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,MONDO:0005070,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,39394434,,GSM7876408,,,train,sda-all,samples/GSE246770/GSM7876408,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.91, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7876409,prostate,disease,neoplasm,prostate gland,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1702,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,GSE246770,GSE246762+GSE246770,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,MONDO:0005070,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,39394434,,GSM7876409,,,train,sda-all,samples/GSE246770/GSM7876409,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.71, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM7876410,prostate,disease,neoplasm,prostate gland,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1678,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,GSE246770,GSE246762+GSE246770,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,MONDO:0005070,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,39394434,,GSM7876410,,,train,sda-all,samples/GSE246770/GSM7876410,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM7876411,prostate,disease,neoplasm,prostate gland,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3135,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,GSE246770,GSE246762+GSE246770,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,MONDO:0005070,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,39394434,,GSM7876411,,,train,sda-all,samples/GSE246770/GSM7876411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM7876412,prostate,disease,neoplasm,prostate gland,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2913,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,GSE246770,GSE246762+GSE246770,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,MONDO:0005070,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,39394434,,GSM7876412,,,train,sda-all,samples/GSE246770/GSM7876412,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.74, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM7876413,lymph node,disease,neoplasm,lymph node,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2184,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,GSE246770,GSE246762+GSE246770,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000029,periaortic lymph node met,MONDO:0005070,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,39394434,,GSM7876413,,,train,sda-all,samples/GSE246770/GSM7876413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM7876414,lymph node,disease,neoplasm,lymph node,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2158,Profiling of murine tumors initiated by transplantation of engineered prostate organoids,GSE246770,GSE246762+GSE246770,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000029,periaortic lymph node met,MONDO:0005070,luna,,Rb1/Trp53 KO; cMyc overexpressing (RPM),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,39394434,,GSM7876414,,,train,sda-all,samples/GSE246770/GSM7876414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM7890128,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,1077,MERFISH reveals embryonic endothelial heterogeneity,GSE247450,GSE247450,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,whole embryo,,luna,,wild type,age rule: embryonic day,embryonic,E9.5,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38348657,,GSM7890128,,,train,sda-all,samples/GSE247450/GSM7890128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7890129,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,6835,MERFISH reveals embryonic endothelial heterogeneity,GSE247450,GSE247450,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,whole embryo,,luna,,wild type,age rule: embryonic day,embryonic,E9.5,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38348657,,GSM7890129,,,train,sda-all,samples/GSE247450/GSM7890129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7890130,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,219525,MERFISH reveals embryonic endothelial heterogeneity,GSE247450,GSE247450,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,whole embryo,,luna,,wild type,age rule: embryonic day,embryonic,E15.5,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,,,,,,VERIFIED,,,,38348657,,GSM7890130,,,train,sda-all,samples/GSE247450/GSM7890130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308910,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,female,Other,Well-ST-seq,False,,3364,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,GSE247834,GSE247834,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,E13.5,extracted field,Female,,,,,release v3,sequencing-based,other,,,spot,31253,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8308910,,,train,sda-all,samples/GSE247834/GSM8308910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308911,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,female,Other,Well-ST-seq,False,,3600,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,GSE247834,GSE247834,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,E13.5,extracted field,Female,,,,,release v3,sequencing-based,other,,,spot,31253,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8308911,,,train,sda-all,samples/GSE247834/GSM8308911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308912,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,female,Other,Well-ST-seq,False,,3364,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,GSE247834,GSE247834,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,E13.5,extracted field,Female,,,,,release v3,sequencing-based,other,,,spot,31253,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8308912,,,train,sda-all,samples/GSE247834/GSM8308912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8308913,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,female,Other,Well-ST-seq,False,,3364,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,GSE247834,GSE247834,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,Female,,,,,release v3,sequencing-based,other,,,spot,31253,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8308913,,,train,sda-all,samples/GSE247834/GSM8308913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308914,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,female,Other,Well-ST-seq,False,,1399,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,GSE247834,GSE247834,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,E13.5,extracted field,Female,,,,,release v3,sequencing-based,other,,,spot,31253,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM8308914,,,train,sda-all,samples/GSE247834/GSM8308914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308915,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,female,Other,Well-ST-seq,False,,3390,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,GSE247834,GSE247834,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,E13.5,extracted field,Female,,,,,release v3,sequencing-based,other,,,spot,31253,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8308915,,,train,sda-all,samples/GSE247834/GSM8308915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308916,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,female,Other,Well-ST-seq,False,,2681,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,GSE247834,GSE247834,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,E13.5,extracted field,Female,,,,,release v3,sequencing-based,other,,,spot,31253,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM8308916,,,train,sda-all,samples/GSE247834/GSM8308916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8308917,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,female,Other,Well-ST-seq,False,,2633,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,GSE247834,GSE247834,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,E13.5,extracted field,Female,,,,,release v3,sequencing-based,other,,,spot,31253,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM8308917,,,train,sda-all,samples/GSE247834/GSM8308917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308918,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,female,Other,Well-ST-seq,False,,1910,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,GSE247834,GSE247834,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,E13.5,extracted field,Female,,,,,release v3,sequencing-based,other,,,spot,31253,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM8308918,,,train,sda-all,samples/GSE247834/GSM8308918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.64, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8308919,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,female,Other,Well-ST-seq,False,,2497,Well-ST-seq: cost-effective and cellular level spatial transcriptomics with high RNA capture efficiency,GSE247834,GSE247834,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,age rule: embryonic day,embryonic,E13.5,extracted field,Female,,,,,release v3,sequencing-based,other,,,spot,31253,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM8308919,,,train,sda-all,samples/GSE247834/GSM8308919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7905572,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2282,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Chow diet,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.244932219591538,platform_constant,4.244932219591538,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905572,,,train,hesrt,samples/GSE248077/GSM7905572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7905573,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1841,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Chow diet,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.244570183798959,platform_constant,4.244570183798959,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905573,,,train,hesrt,samples/GSE248077/GSM7905573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905574,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1719,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Chow diet,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.246259564987877,platform_constant,4.246259564987877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905574,,,train,hesrt,samples/GSE248077/GSM7905574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905575,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2254,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Chow diet,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.244232639482823,platform_constant,4.244232639482823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905575,,,train,hesrt,samples/GSE248077/GSM7905575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905576,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2527,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Chow diet,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.245439307106261,platform_constant,4.245439307106261,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905576,,,train,hesrt,samples/GSE248077/GSM7905576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905577,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2165,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Chow diet,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.245270460076306,platform_constant,4.245270460076306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905577,,,train,hesrt,samples/GSE248077/GSM7905577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905578,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1674,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,,CDAA-HFD diet (NASH model),luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.245439307106261,platform_constant,4.245439307106261,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905578,,,train,hesrt,samples/GSE248077/GSM7905578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905579,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1396,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,,CDAA-HFD diet (NASH model),luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.2457770414626665,platform_constant,4.2457770414626665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905579,,,train,hesrt,samples/GSE248077/GSM7905579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7905580,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3184,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,,CDAA-HFD diet (NASH model),luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.245246233712873,platform_constant,4.245246233712873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905580,,,train,hesrt,samples/GSE248077/GSM7905580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905581,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1699,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,,CDAA-HFD diet (NASH model),luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.245583672505967,platform_constant,4.245583672505967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905581,,,train,hesrt,samples/GSE248077/GSM7905581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905582,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2134,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,,CDAA-HFD diet (NASH model),luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.246090598376428,platform_constant,4.246090598376428,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905582,,,train,hesrt,samples/GSE248077/GSM7905582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905583,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2993,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,,CDAA-HFD diet (NASH model),luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.245270460076306,platform_constant,4.245270460076306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905583,,,train,hesrt,samples/GSE248077/GSM7905583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7905584,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1932,Perturbed liver gene zonation in a mouse model of non-alcoholic steatohepatitis,GSE248077,GSE248077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,,CDAA-HFD diet (NASH model),luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32338,counts,pixel,4.245607900795063,platform_constant,4.245607900795063,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7905584,,,train,hesrt,samples/GSE248077/GSM7905584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7905760,lung,disease,idiopathic pulmonary fibrosis;pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2611,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Idiopathic pulmonary fibrosis,MONDO:0800504;MONDO:0002771,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.087568027069517,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905760,,,train,sda-all,samples/GSE248082/GSM7905760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7905761,lung,disease,idiopathic pulmonary fibrosis;pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4721,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Idiopathic pulmonary fibrosis,MONDO:0800504;MONDO:0002771,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.170410231199979,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905761,,,train,sda-all,samples/GSE248082/GSM7905761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7905762,lung,disease,idiopathic pulmonary fibrosis;pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4650,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Idiopathic pulmonary fibrosis,MONDO:0800504;MONDO:0002771,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.9557455975757967,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905762,,,train,sda-all,samples/GSE248082/GSM7905762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7905763,lung,disease,idiopathic pulmonary fibrosis;pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4430,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Idiopathic pulmonary fibrosis,MONDO:0800504;MONDO:0002771,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.8650276233115766,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905763,,,train,sda-all,samples/GSE248082/GSM7905763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7905765,lung,disease,idiopathic pulmonary fibrosis;pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4235,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Idiopathic pulmonary fibrosis,MONDO:0800504;MONDO:0002771,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.9458412052593417,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905765,,,train,sda-all,samples/GSE248082/GSM7905765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7905767,lung,disease,idiopathic pulmonary fibrosis;pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4458,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Idiopathic pulmonary fibrosis,MONDO:0800504;MONDO:0002771,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.177569980258376,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905767,,,train,sda-all,samples/GSE248082/GSM7905767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7905768,lung,disease,idiopathic pulmonary fibrosis;pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4653,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Idiopathic pulmonary fibrosis,MONDO:0800504;MONDO:0002771,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.6135596176196225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM7905768,,,train,sda-all,samples/GSE248082/GSM7905768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8087031,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4332,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Normal human lung,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.906857169053641,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087031,,,train,sda-all,samples/GSE248082/GSM8087031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8087032,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2944,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Normal human lung,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.592366117860611,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087032,,,train,sda-all,samples/GSE248082/GSM8087032,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8087033,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3393,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Normal human lung,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.7606806119995615,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087033,,,train,sda-all,samples/GSE248082/GSM8087033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8087034,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1798,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Normal human lung,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.089491304762761,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087034,,,train,sda-all,samples/GSE248082/GSM8087034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8087035,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4547,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Normal human lung,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.071984693334073,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087035,,,train,sda-all,samples/GSE248082/GSM8087035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8087038,lung,disease,idiopathic pulmonary fibrosis;interstitial lung disease 2;pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2753,Spatial deconvolution of tertiary lymphoid structure in human IPF lungs revealed novel CCL19-expressing mural cells,GSE248082,GSE248082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Idiopathic pulmonary fibrosis,MONDO:0800504;MONDO:0800497;MONDO:0002771,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.118531418106387,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39978854,,GSM8087038,,,train,sda-all,samples/GSE248082/GSM8087038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908359,thyroid,normal,,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1302,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,GSE248205,GSE248205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,Thyroid,,luna,control,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8981819055010924,platform_constant,3.8981819055010924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908359,,,test,hesrt,samples/GSE248205/GSM7908359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908360,thyroid,normal,,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2290,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,GSE248205,GSE248205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,Thyroid,,luna,control,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.970200272613379,platform_constant,3.970200272613379,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908360,,,test,hesrt,samples/GSE248205/GSM7908360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908361,thyroid,disease,Hashimoto thyroiditis,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2041,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,GSE248205,GSE248205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,Thyroid,MONDO:0007699,luna,Hashimoto's thyroiditis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.194545574006121,platform_constant,4.194545574006121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908361,,,test,hesrt,samples/GSE248205/GSM7908361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908362,thyroid,disease,Hashimoto thyroiditis,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2625,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,GSE248205,GSE248205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,Thyroid,MONDO:0007699,luna,Hashimoto's thyroiditis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.363636433454573,platform_constant,4.363636433454573,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908362,,,test,hesrt,samples/GSE248205/GSM7908362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908363,thyroid,disease,Hashimoto thyroiditis,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2144,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,GSE248205,GSE248205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,Thyroid,MONDO:0007699,luna,Hashimoto's thyroiditis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.363636433454573,platform_constant,4.363636433454573,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908363,,,test,hesrt,samples/GSE248205/GSM7908363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908364,thyroid,disease,Graves disease,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2279,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,GSE248205,GSE248205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,Thyroid,MONDO:0005364,luna,Graves' disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.363636433454573,platform_constant,4.363636433454573,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908364,,,test,hesrt,samples/GSE248205/GSM7908364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908365,thyroid,disease,Graves disease,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2171,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,GSE248205,GSE248205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,Thyroid,MONDO:0005364,luna,Graves' disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.245544649555644,platform_constant,4.245544649555644,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908365,,,test,hesrt,samples/GSE248205/GSM7908365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908366,thyroid,disease,Graves disease,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2133,Unraveling the molecular architecture of autoimmune thyroid diseases at spatial resolution,GSE248205,GSE248205,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,Thyroid,MONDO:0005364,luna,Graves' disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8981819055010924,platform_constant,3.8981819055010924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003267,,GSM7908366,,,test,hesrt,samples/GSE248205/GSM7908366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7908792,other,normal,,,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,510,Generation of human neuromusculoskeletal tri-tissue organoids [Spatial Transcriptomics],GSE248230,GSE248230,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.011809216169323,platform_constant,4.011809216169323,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7908792,,,train,hesrt,samples/GSE248230/GSM7908792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": NaN, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7911864,heart,normal,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1978,Spatial transcriptomics to dissect molecular signature of cardiac fibroblasts in experimental autoimmune myocarditis,GSE248347,GSE248347,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,d0,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.141131218215499,platform_constant,5.141131218215499,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41341993,,GSM7911864,,,train,hesrt,samples/GSE248347/GSM7911864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM7911866,heart,disease,autoimmune myocarditis,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,1811,Spatial transcriptomics to dissect molecular signature of cardiac fibroblasts in experimental autoimmune myocarditis,GSE248347,GSE248347,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0022519,mondo_predicate,,d19,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.475135310247175,platform_constant,4.475135310247175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41341993,,GSM7911866,,,train,hesrt,samples/GSE248347/GSM7911866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.15}",disease_status;life_stage,low_confidence_annotation
GSM7911966,other,disease,melanoma,,xenograft,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,4798,Spatial transcriptomics reveals the pharmacological effects on tumors and TME structural heterogeneity under MASK vaccine treatment,GSE248356,GSE248356,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005105,luna,melanoma,PBS,age rule: age with unit,not stated,4 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,5.669230425602122,platform_constant,5.669230425602122,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40303352,,GSM7911966,,,train,hesrt,samples/GSE248356/GSM7911966,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7911967,other,disease,melanoma,,xenograft,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,4898,Spatial transcriptomics reveals the pharmacological effects on tumors and TME structural heterogeneity under MASK vaccine treatment,GSE248356,GSE248356,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005105,luna,melanoma,"MASK vaccine, 7 days",age rule: age with unit,not stated,4 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,5.036046611392796,platform_constant,5.036046611392796,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40303352,,GSM7911967,,,train,hesrt,samples/GSE248356/GSM7911967,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7911968,other,disease,melanoma,,xenograft,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E,4663,Spatial transcriptomics reveals the pharmacological effects on tumors and TME structural heterogeneity under MASK vaccine treatment,GSE248356,GSE248356,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005105,luna,melanoma,"MASK vaccine, 13 days",age rule: age with unit,not stated,4 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,6.71452840267181,platform_constant,6.71452840267181,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40303352,,GSM7911968,,,train,hesrt,samples/GSE248356/GSM7911968,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7916286,eye,normal,,eyeball of camera-type eye,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,575,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,GSE248517,GSE248517,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0010230,eye,,luna,,dim-reared control,age rule: age with unit,juvenile,6 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.547973562439277,platform_constant,4.547973562439277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916286,,,train,hesrt,samples/GSE248517/GSM7916286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7916287,eye,perturbation,,eyeball of camera-type eye,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,930,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,GSE248517,GSE248517,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0010230,eye,,luna,,1-day photo-oxidative damage,age rule: age with unit,juvenile,6 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.517288811231892,platform_constant,4.517288811231892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916287,,,train,hesrt,samples/GSE248517/GSM7916287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7916288,eye,perturbation,,eyeball of camera-type eye,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,968,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,GSE248517,GSE248517,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0010230,eye,,luna,,3-day photo-oxidative damage,age rule: age with unit,juvenile,6 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.351956975584891,platform_constant,4.351956975584891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916288,,,train,hesrt,samples/GSE248517/GSM7916288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7916289,eye,perturbation,,eyeball of camera-type eye,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,733,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,GSE248517,GSE248517,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0010230,eye,,luna,,5-day photo-oxidative damage,age rule: age with unit,juvenile,6 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.351956975584891,platform_constant,4.351956975584891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916289,,,train,hesrt,samples/GSE248517/GSM7916289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM7916290,eye,normal,,eyeball of camera-type eye,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,975,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,GSE248517,GSE248517,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0010230,eye,,luna,,dim-reared control,age rule: age with unit,juvenile,6 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.520177712555967,platform_constant,4.520177712555967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916290,,,train,hesrt,samples/GSE248517/GSM7916290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM7916291,eye,perturbation,,eyeball of camera-type eye,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,575,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,GSE248517,GSE248517,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0010230,eye,,luna,,1-day photo-oxidative damage,age rule: age with unit,juvenile,6 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.52017771255599,platform_constant,4.52017771255599,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916291,,,train,hesrt,samples/GSE248517/GSM7916291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7916292,eye,perturbation,,eyeball of camera-type eye,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,566,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,GSE248517,GSE248517,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0010230,eye,,luna,,3-day photo-oxidative damage,age rule: age with unit,juvenile,6 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.351956975584891,platform_constant,4.351956975584891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916292,,,train,hesrt,samples/GSE248517/GSM7916292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.46, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7916293,eye,perturbation,,eyeball of camera-type eye,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,573,Seeing the whole transcriptomics picture: Spatial gene expression analysis reveals photoreceptor stress as modulator of retinal vascular changes,GSE248517,GSE248517,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0010230,eye,,luna,,5-day photo-oxidative damage,age rule: age with unit,juvenile,6 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.351956975584891,platform_constant,4.351956975584891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40251274,,GSM7916293,,,train,hesrt,samples/GSE248517/GSM7916293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM7916581,brain,normal,,dentate gyrus of hippocampal formation,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4431,Spatial transcriptomics analysis of adult hippocampal neurogenesis in the human brain,GSE248545,GSE248545,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001885,Dentate gyrus,,luna,,control,age rule: age in years,adult,42 years,extracted field,male,GSE248545:GSM7916581,GSM7916581,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.129011939409985,platform_constant,4.129011939409985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414359,,GSM7916581,,,test,hesrt,samples/GSE248545/GSM7916581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7916582,brain,normal,,dentate gyrus of hippocampal formation,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2996,Spatial transcriptomics analysis of adult hippocampal neurogenesis in the human brain,GSE248545,GSE248545,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001885,Dentate gyrus,,luna,,control,age rule: age in years,adult,43 years,extracted field,male,GSE248545:GSM7916582,GSM7916582,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9824561797772193,platform_constant,3.9824561797772193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414359,,GSM7916582,,,test,hesrt,samples/GSE248545/GSM7916582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7916583,brain,normal,,dentate gyrus of hippocampal formation,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3667,Spatial transcriptomics analysis of adult hippocampal neurogenesis in the human brain,GSE248545,GSE248545,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001885,Dentate gyrus,,luna,,control,age rule: age in years,adult,26 years,extracted field,male,GSE248545:GSM7916583,GSM7916583,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.087719196870186,platform_constant,4.087719196870186,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414359,,GSM7916583,,,test,hesrt,samples/GSE248545/GSM7916583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7916584,brain,normal,,dentate gyrus of hippocampal formation,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3129,Spatial transcriptomics analysis of adult hippocampal neurogenesis in the human brain,GSE248545,GSE248545,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001885,Dentate gyrus,,luna,,control,age rule: age in years,adult,21 years,extracted field,male,GSE248545:GSM7916584,GSM7916584,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9814843784175635,platform_constant,3.9814843784175635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414359,,GSM7916584,,,test,hesrt,samples/GSE248545/GSM7916584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7917894,blood vessel,disease,diabetes mellitus;calcinosis,anterior tibial artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1786,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],GSE248608,GSE248608+GSE248610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001537,Anterior tibial artery,MONDO:0005015;MONDO:0002123,luna,diabetic macroangiopathy,calcified,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37487,counts,pixel,4.476502823919202,platform_constant,4.476502823919202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917894,,,train,hesrt,samples/GSE248608/GSM7917894,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7917895,blood vessel,disease,diabetes mellitus;calcinosis,anterior tibial artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1294,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],GSE248608,GSE248608+GSE248610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001537,Anterior tibial artery,MONDO:0005015;MONDO:0002123,luna,diabetic macroangiopathy,calcified,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.970959269348189,platform_constant,3.970959269348189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917895,,,train,hesrt,samples/GSE248608/GSM7917895,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7917896,blood vessel,disease,diabetes mellitus;calcinosis,anterior tibial artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1644,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],GSE248608,GSE248608+GSE248610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001537,Anterior tibial artery,MONDO:0005015;MONDO:0002123,luna,diabetic macroangiopathy,calcified,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.07437178660968,platform_constant,4.07437178660968,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917896,,,train,hesrt,samples/GSE248608/GSM7917896,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7917897,blood vessel,disease,,anterior tibial artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1381,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],GSE248608,GSE248608+GSE248610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001537,Anterior tibial artery,,luna,diabetic macroangiopathy,non-calcified,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37487,counts,pixel,4.126776088340984,platform_constant,4.126776088340984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917897,,,train,hesrt,samples/GSE248608/GSM7917897,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7917898,blood vessel,disease,diabetes mellitus,anterior tibial artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,709,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],GSE248608,GSE248608+GSE248610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001537,Anterior tibial artery,MONDO:0005015,luna,diabetic macroangiopathy,non-calcified,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9856057870141504,platform_constant,3.9856057870141504,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917898,,,train,hesrt,samples/GSE248608/GSM7917898,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7917899,blood vessel,disease,,anterior tibial artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1716,Spatial Multiomics Reveals Metabolic Reprogramming and Calcification Characteristics of Diabetic Macroangiopathy [Spatial Transcriptomics],GSE248608,GSE248608+GSE248610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001537,Anterior tibial artery,,luna,diabetic macroangiopathy,non-calcified,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.025879410854079,platform_constant,4.025879410854079,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39395983,,GSM7917899,,,train,hesrt,samples/GSE248608/GSM7917899,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7918345,other,normal,,patellar ligament,primary tissue,Rattus norvegicus,Norway rat,not stated,male,Visium,Visium,True,H&E,2179,Spatial Gene Expression in the Adult Rat Patellar Tendon,GSE248646,GSE248646,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0003676,Patellar tendon,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,0.5847853223158802,platform_constant,0.5847853223158802,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7918345,,,train,hesrt,samples/GSE248646/GSM7918345,sda-tissue-disease-2.4,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7918346,other,normal,,patellar ligament,primary tissue,Rattus norvegicus,Norway rat,not stated,male,Visium,Visium,True,H&E,1624,Spatial Gene Expression in the Adult Rat Patellar Tendon,GSE248646,GSE248646,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0003676,Patellar tendon,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,0.5847853223158802,platform_constant,0.5847853223158802,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7918346,,,train,hesrt,samples/GSE248646/GSM7918346,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7923470,heart,disease,cardiac rhythm disease,heart,cell culture,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),2817,Cellular Heterogeneity of Pluripotent Stem Cell Derived Cardiomyocyte Grafts is Mechanistically Linked to Treatable Arrhythmias,GSE248953,GSE248953,9606,Homo sapiens;Sus scrofa,9606;9823,,False,True,GEO organism field,"Homo sapiens
Sus scrofa",,luna,UBERON:0000948,heart,MONDO:0007263,mondo_predicate (Luna: perturbation),,retinoic acid treatment,rule: culture or organoid (culture time is not a life stage),not stated,,sample text,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,65446,counts,um,1.0,verified,3.9151869621505315,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM7923470,,,train,sda-all,samples/GSE248953/GSM7923470,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM7923471,heart,disease,heart disorder,heart,cell culture,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E-like (heuristic),2742,Cellular Heterogeneity of Pluripotent Stem Cell Derived Cardiomyocyte Grafts is Mechanistically Linked to Treatable Arrhythmias,GSE248953,GSE248953,9606,Homo sapiens;Sus scrofa,9606;9823,,False,True,GEO organism field,"Homo sapiens
Sus scrofa",,luna,UBERON:0000948,heart,MONDO:0005267,mondo_predicate,,standard treatment,rule: culture or organoid (culture time is not a life stage),not stated,,sample text,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,65446,counts,um,1.0,verified,3.8650725659718423,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM7923471,,,train,sda-all,samples/GSE248953/GSM7923471,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.39, ""uberon"": 0.64, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM7926970,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2764,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_AK_ADM_D2_Rep1,age rule: age with unit,adult,28 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.131902457249005,platform_constant,4.131902457249005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926970,,,train,hesrt,samples/GSE249121/GSM7926970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926971,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2386,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_AK_ADM_D2_Rep2,age rule: age with unit,adult,20 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.11552959065595,platform_constant,4.11552959065595,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926971,,,train,hesrt,samples/GSE249121/GSM7926971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926972,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3102,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_AK_ADM_D4_Rep2,age rule: age with unit,adult,24 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.025693156905992,platform_constant,4.025693156905992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926972,,,train,hesrt,samples/GSE249121/GSM7926972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926973,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4124,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_AK_ADM_D4_Rep1,age rule: age with unit,adult,18 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.131288474322492,platform_constant,4.131288474322492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926973,,,train,hesrt,samples/GSE249121/GSM7926973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926974,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3079,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_AK_ADM_D7_Rep1,age rule: age with unit,adult,18 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.120436844006502,platform_constant,4.120436844006502,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926974,,,train,hesrt,samples/GSE249121/GSM7926974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926975,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3112,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_AK_ADM_D7_Rep2,age rule: age with unit,adult,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.110074390456353,platform_constant,4.110074390456353,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926975,,,train,hesrt,samples/GSE249121/GSM7926975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7926976,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2979,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_AK_Ctrl_D2_Rep1,age rule: age with unit,adult,10 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.08603943771149,platform_constant,4.08603943771149,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926976,,,train,hesrt,samples/GSE249121/GSM7926976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926977,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2784,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_AK_Ctrl_D2_Rep2,age rule: age with unit,adult,10 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.110544841703988,platform_constant,4.110544841703988,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926977,,,train,hesrt,samples/GSE249121/GSM7926977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7926978,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3757,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_AK_Ctrl_D4_Rep1,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.1155295906559415,platform_constant,4.1155295906559415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926978,,,train,hesrt,samples/GSE249121/GSM7926978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7926979,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3533,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_AK_Ctrl_D7_Rep1,age rule: age with unit,adult,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.1111473114016714,platform_constant,4.1111473114016714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926979,,,train,hesrt,samples/GSE249121/GSM7926979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7926980,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1849,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_Caer_ADM_D2_Rep1,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.1367300322727045,platform_constant,4.1367300322727045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926980,,,train,hesrt,samples/GSE249121/GSM7926980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926981,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1030,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_Caer_ADM_D2_Rep2,age rule: age with unit,juvenile,6 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.201300739219314,platform_constant,4.201300739219314,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926981,,,train,hesrt,samples/GSE249121/GSM7926981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926982,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1697,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_Caer_ADM_D4_Rep1,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.095485978854921,platform_constant,4.095485978854921,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926982,,,train,hesrt,samples/GSE249121/GSM7926982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926983,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1563,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_Caer_ADM_D4_Rep2,age rule: age with unit,juvenile,6 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.084643294743274,platform_constant,4.084643294743274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926983,,,train,hesrt,samples/GSE249121/GSM7926983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926984,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2105,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_Caer_ADM_D7_Rep1,age rule: age with unit,juvenile,7 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.130695485689417,platform_constant,4.130695485689417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926984,,,train,hesrt,samples/GSE249121/GSM7926984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926985,pancreas,perturbation,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2139,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_Caer_ADM_D7_Rep2,age rule: age with unit,juvenile,7 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.087246610185445,platform_constant,4.087246610185445,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926985,,,train,hesrt,samples/GSE249121/GSM7926985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7926986,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1400,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_Saline_Ctrl_D2_Rep1,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.1870511383740965,platform_constant,4.1870511383740965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926986,,,train,hesrt,samples/GSE249121/GSM7926986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7926987,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,788,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_Saline_Ctrl_D2_Rep2,age rule: age with unit,juvenile,6 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.206923488631324,platform_constant,4.206923488631324,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926987,,,train,hesrt,samples/GSE249121/GSM7926987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7926988,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1455,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_Saline_Ctrl_D4_Rep1,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.111749817395417,platform_constant,4.111749817395417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926988,,,train,hesrt,samples/GSE249121/GSM7926988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7926989,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2053,DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics],GSE249121,GSE249121+GSE249143,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,,luna,,Panc_Saline_Ctrl_D7_Rep1,age rule: age with unit,juvenile,7 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.080607972216002,platform_constant,4.080607972216002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156071,,GSM7926989,,,train,hesrt,samples/GSE249121/GSM7926989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7932817,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,846,Systems-based identification of the Hippo pathway for promoting fibrotic mesenchymal differentiation in systemic sclerosis,GSE249279,GSE249279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Skin,MONDO:0005100,luna,Scleroderma skin,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,5.026784190167373,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38172207;40164604;42124727,,GSM7932817,,,train,sda-all,samples/GSE249279/GSM7932817,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7932818,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,907,Systems-based identification of the Hippo pathway for promoting fibrotic mesenchymal differentiation in systemic sclerosis,GSE249279,GSE249279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005100,luna,Scleroderma skin,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,5.029370789652315,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38172207;40164604;42124727,,GSM7932818,,,train,sda-all,samples/GSE249279/GSM7932818,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.34, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7932819,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,841,Systems-based identification of the Hippo pathway for promoting fibrotic mesenchymal differentiation in systemic sclerosis,GSE249279,GSE249279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Skin,MONDO:0005100,luna,Scleroderma skin,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.997927494858994,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38172207;40164604;42124727,,GSM7932819,,,train,sda-all,samples/GSE249279/GSM7932819,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7932820,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,951,Systems-based identification of the Hippo pathway for promoting fibrotic mesenchymal differentiation in systemic sclerosis,GSE249279,GSE249279,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005100,luna,Scleroderma skin,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,5.037297735402497,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38172207;40164604;42124727,,GSM7932820,,,train,sda-all,samples/GSE249279/GSM7932820,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM7946801,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,2664,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,neonatal or infant,P7,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.2986043374578236,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946801,,,val,sda-all,samples/GSE249403/GSM7946801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946802,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,2692,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,neonatal or infant,P7,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.296879287066082,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946802,,,val,sda-all,samples/GSE249403/GSM7946802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946803,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,2587,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,neonatal or infant,P7,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.2972210257630294,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946803,,,val,sda-all,samples/GSE249403/GSM7946803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946804,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,2558,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,neonatal or infant,P7,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.2941266994590475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946804,,,val,sda-all,samples/GSE249403/GSM7946804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946805,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2958,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.067997459082854,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946805,,,val,sda-all,samples/GSE249403/GSM7946805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946806,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2816,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.068311511074861,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946806,,,val,sda-all,samples/GSE249403/GSM7946806,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM7946807,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2905,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.072800677899719,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946807,,,val,sda-all,samples/GSE249403/GSM7946807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7946808,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2874,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.072396309426684,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946808,,,val,sda-all,samples/GSE249403/GSM7946808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946809,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2924,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.300327509474562,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946809,,,val,sda-all,samples/GSE249403/GSM7946809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946810,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2967,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.073620875615545,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946810,,,val,sda-all,samples/GSE249403/GSM7946810,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946811,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2932,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.074655972300991,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946811,,,val,sda-all,samples/GSE249403/GSM7946811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM7946812,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3003,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 4hr,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.300456784301363,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946812,,,val,sda-all,samples/GSE249403/GSM7946812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946813,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2508,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 2 hours before the mice were euthanized.,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.071323448795545,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946813,,,val,sda-all,samples/GSE249403/GSM7946813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946814,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2494,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 2 hours before the mice were euthanized.,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.070560562436795,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946814,,,val,sda-all,samples/GSE249403/GSM7946814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946815,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2978,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 2 hours before the mice were euthanized.,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.0714104153920925,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946815,,,val,sda-all,samples/GSE249403/GSM7946815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM7946816,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3009,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 2 hours before the mice were euthanized.,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.296695244196369,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946816,,,val,sda-all,samples/GSE249403/GSM7946816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7946817,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2377,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 30min before the mice were euthanized.,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.070710749847536,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946817,,,val,sda-all,samples/GSE249403/GSM7946817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946818,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2441,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 30min before the mice were euthanized.,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.071541812019311,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946818,,,val,sda-all,samples/GSE249403/GSM7946818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946819,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2819,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 30min before the mice were euthanized.,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.072059938856276,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946819,,,val,sda-all,samples/GSE249403/GSM7946819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7946820,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2930,Spatial mapping of RNA turnover kinetics in the mouse brain [Spatial NT-seq],GSE249403,GSE249403+GSE249405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,The mice were labeled with 4-thiouridine (4sU) for 3hr. Electroconvulsive stimulation at 30min before the mice were euthanized.,age rule: postnatal day,juvenile,P56,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,55357,counts,um,1.0,verified,4.298114146573785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42675226,,GSM7946820,,,val,sda-all,samples/GSE249403/GSM7946820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7962127,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3766,Spatial transcriptomics data of HS lesional skin and healthy skin,GSE249729,GSE249729,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,HS lesional skin,,luna,hidradenitis suppurativa,HS lesional skin,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.000000160000006,platform_constant,4.000000160000006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38113104,,GSM7962127,,,train,hesrt,samples/GSE249729/GSM7962127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM7962128,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4437,Spatial transcriptomics data of HS lesional skin and healthy skin,GSE249729,GSE249729,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,HS lesional skin,,luna,hidradenitis suppurativa,HS lesional skin,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.993420950799328,platform_constant,3.993420950799328,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38113104,,GSM7962128,,,train,hesrt,samples/GSE249729/GSM7962128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM7962129,skin,normal,,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1815,Spatial transcriptomics data of HS lesional skin and healthy skin,GSE249729,GSE249729,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Normal control skin,,luna,,Normal control skin,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.885143604834801,platform_constant,3.885143604834801,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38113104,,GSM7962129,,,train,hesrt,samples/GSE249729/GSM7962129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7964513,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3371,Spatial transcriptomics reveals spatial remodling of hepatic lobule during liver regeneration,GSE249803,GSE249803+GSE249804,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Undamaged,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,54232,counts,pixel,4.515757243632539,platform_constant,4.515757243632539,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41033443,,GSM7964513,,,train,hesrt,samples/GSE249803/GSM7964513,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7964514,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3658,Spatial transcriptomics reveals spatial remodling of hepatic lobule during liver regeneration,GSE249803,GSE249803+GSE249804,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,PHx24h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,54232,counts,pixel,4.50443352271427,platform_constant,4.50443352271427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41033443,,GSM7964514,,,train,hesrt,samples/GSE249803/GSM7964514,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7964515,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3080,Spatial transcriptomics reveals spatial remodling of hepatic lobule during liver regeneration,GSE249803,GSE249803+GSE249804,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,PHx48h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,54232,counts,pixel,4.509610335715777,platform_constant,4.509610335715777,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41033443,,GSM7964515,,,train,hesrt,samples/GSE249803/GSM7964515,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7964516,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2827,Spatial transcriptomics reveals spatial remodling of hepatic lobule during liver regeneration,GSE249803,GSE249803+GSE249804,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,CCl4,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,54232,counts,pixel,4.508963290416954,platform_constant,4.508963290416954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41033443,,GSM7964516,,,train,hesrt,samples/GSE249803/GSM7964516,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7968251,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,3212,Spatial transcriptomics of primary human hepatoblastomas,GSE249965,GSE249965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.370865117913649,platform_constant,4.370865117913649,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567523,,GSM7968251,,,train,hesrt,samples/GSE249965/GSM7968251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7968252,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1350,Spatial transcriptomics of primary human hepatoblastomas,GSE249965,GSE249965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.8094019244333985,platform_constant,4.8094019244333985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567523,,GSM7968252,,,train,hesrt,samples/GSE249965/GSM7968252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7968253,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1729,Spatial transcriptomics of primary human hepatoblastomas,GSE249965,GSE249965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Normal liver,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.807111908562388,platform_constant,4.807111908562388,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567523,,GSM7968253,,,train,hesrt,samples/GSE249965/GSM7968253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.28, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM7974475,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,883,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.2799998866656095,platform_constant,4.2799998866656095,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974475,,,train,hesrt,samples/GSE250138/GSM7974475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974476,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,724,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.277142870017056,platform_constant,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974476,,,train,hesrt,samples/GSE250138/GSM7974476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974477,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,388,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.275714031950661,platform_constant,4.275714031950661,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974477,,,train,hesrt,samples/GSE250138/GSM7974477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974478,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,624,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.278571638221454,platform_constant,4.278571638221454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974478,,,train,hesrt,samples/GSE250138/GSM7974478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974479,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,686,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.277142870017056,platform_constant,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974479,,,train,hesrt,samples/GSE250138/GSM7974479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974480,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,537,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.277142870017056,platform_constant,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974480,,,train,hesrt,samples/GSE250138/GSM7974480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7974481,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,869,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.277142870017056,platform_constant,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974481,,,train,hesrt,samples/GSE250138/GSM7974481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7974482,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,719,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.278571638221454,platform_constant,4.278571638221454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974482,,,train,hesrt,samples/GSE250138/GSM7974482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7974483,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,698,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.2799998866656095,platform_constant,4.2799998866656095,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974483,,,train,hesrt,samples/GSE250138/GSM7974483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974484,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,999,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.278571638221454,platform_constant,4.278571638221454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974484,,,train,hesrt,samples/GSE250138/GSM7974484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7974485,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,580,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.275714031950681,platform_constant,4.275714031950681,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974485,,,train,hesrt,samples/GSE250138/GSM7974485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974486,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,484,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.278571638221433,platform_constant,4.278571638221433,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974486,,,train,hesrt,samples/GSE250138/GSM7974486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7974487,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,469,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.277142870017056,platform_constant,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974487,,,train,hesrt,samples/GSE250138/GSM7974487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974488,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,549,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.277142870017056,platform_constant,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974488,,,train,hesrt,samples/GSE250138/GSM7974488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974489,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,749,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.277142870017056,platform_constant,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974489,,,train,hesrt,samples/GSE250138/GSM7974489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7974490,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,724,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.277142870017056,platform_constant,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974490,,,train,hesrt,samples/GSE250138/GSM7974490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974491,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,944,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.278571638221433,platform_constant,4.278571638221433,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974491,,,train,hesrt,samples/GSE250138/GSM7974491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974492,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,489,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.278571638221454,platform_constant,4.278571638221454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974492,,,train,hesrt,samples/GSE250138/GSM7974492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974493,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,696,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.277142870017056,platform_constant,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974493,,,train,hesrt,samples/GSE250138/GSM7974493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974494,kidney,disease,glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,632,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0002462,luna,ANCA-associated glomerulonephritis,ANCA-GN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.277142870017056,platform_constant,4.277142870017056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974494,,,train,hesrt,samples/GSE250138/GSM7974494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7974495,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2997,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.227525725602321,platform_constant,4.227525725602321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974495,,,train,hesrt,samples/GSE250138/GSM7974495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974496,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3047,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.227525725602321,platform_constant,4.227525725602321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974496,,,train,hesrt,samples/GSE250138/GSM7974496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974497,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3609,Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis,GSE250138,GSE250138,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.228655344017829,platform_constant,4.228655344017829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39300109;40393992,10.1038/s41467-024-52525-w,GSM7974497,,,train,hesrt,samples/GSE250138/GSM7974497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7974884,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,1659,Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics],GSE250163,GSE250163,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,clear Cell Renal Cell Carcinoma,MONDO:0005005,luna,clear Cell Renal Cell Carcinoma,Stage III,age rule: bare number read as years,aged,72,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.472133090263434,platform_constant,4.472133090263434,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39476412,,GSM7974884,,,test,hesrt,samples/GSE250163/GSM7974884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM7974885,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,3239,Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics],GSE250163,GSE250163,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,clear Cell Renal Cell Carcinoma,MONDO:0005005,luna,clear Cell Renal Cell Carcinoma,Stage III,age rule: bare number read as years,aged,77,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,5.024209358646083,platform_constant,5.024209358646083,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39476412,,GSM7974885,,,test,hesrt,samples/GSE250163/GSM7974885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7974886,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,3076,Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics],GSE250163,GSE250163,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,clear Cell Renal Cell Carcinoma,MONDO:0005005,luna,clear Cell Renal Cell Carcinoma,Stage III,age rule: bare number read as years,adult,51,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.657516317625369,platform_constant,4.657516317625369,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39476412,,GSM7974886,,,test,hesrt,samples/GSE250163/GSM7974886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7974887,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,2258,Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics],GSE250163,GSE250163,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,clear Cell Renal Cell Carcinoma,MONDO:0005005,luna,clear Cell Renal Cell Carcinoma,Stage III,age rule: bare number read as years,adult,61,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.657516317625344,platform_constant,4.657516317625344,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39476412,,GSM7974887,,,test,hesrt,samples/GSE250163/GSM7974887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM7974888,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,3388,Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics],GSE250163,GSE250163,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,clear Cell Renal Cell Carcinoma,MONDO:0005005,luna,clear Cell Renal Cell Carcinoma,Stage III,age rule: bare number read as years,adult,50,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.657516317625344,platform_constant,4.657516317625344,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39476412,,GSM7974888,,,test,hesrt,samples/GSE250163/GSM7974888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7990532,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,73785,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,age rule: bare number read as years,adult,53,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999885247406591,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990532,,,train,sda-all,samples/GSE250346/GSM7990532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990533,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,34998,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,age rule: bare number read as years,adult,48,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999742692466035,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990533,,,train,sda-all,samples/GSE250346/GSM7990533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990534,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,52165,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,,age rule: bare number read as years,adult,54,not stated,,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999948524365133,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990534,,,train,sda-all,samples/GSE250346/GSM7990534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990535,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,40810,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,,age rule: bare number read as years,adult,54,extracted field,F,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990535,,,train,sda-all,samples/GSE250346/GSM7990535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990536,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,38293,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,65,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999948524365133,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990536,,,train,sda-all,samples/GSE250346/GSM7990536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990537,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,23758,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,age rule: bare number read as years,adult,31,extracted field,F,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999671214861088,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990537,,,train,sda-all,samples/GSE250346/GSM7990537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7990538,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,12578,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,age rule: bare number read as years,adult,64,extracted field,F,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.499993830207305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990538,,,train,sda-all,samples/GSE250346/GSM7990538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990539,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,14940,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,age rule: bare number read as years,adult,40,extracted field,F,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.5000390625000001,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990539,,,train,sda-all,samples/GSE250346/GSM7990539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990540,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,12915,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.499993830207305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990540,,,train,sda-all,samples/GSE250346/GSM7990540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990541,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,31189,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.500006867188573,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990541,,,train,sda-all,samples/GSE250346/GSM7990541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990542,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,34750,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,adult,58,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999823217442545,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990542,,,train,sda-all,samples/GSE250346/GSM7990542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990543,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,27973,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,adult,58,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999965668772315,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990543,,,train,sda-all,samples/GSE250346/GSM7990543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990544,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,False,,43183,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,69,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,529,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990544,,,train,sda-all,samples/GSE250346/GSM7990544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990545,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,38984,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,69,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.5000143867148964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990545,,,train,sda-all,samples/GSE250346/GSM7990545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM7990546,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,24843,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,66,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.5000257484207635,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990546,,,train,sda-all,samples/GSE250346/GSM7990546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM7990547,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,False,,22585,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,66,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,518,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990547,,,train,sda-all,samples/GSE250346/GSM7990547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM7990548,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,140997,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,66,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.5000144675925925,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990548,,,train,sda-all,samples/GSE250346/GSM7990548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM7990549,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,72153,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,adult,63,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999734857412208,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990549,,,train,sda-all,samples/GSE250346/GSM7990549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990550,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,133369,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,,age rule: bare number read as years,adult,62,extracted field,F,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.49999793268833204,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990550,,,train,sda-all,samples/GSE250346/GSM7990550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990551,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,108131,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,,age rule: bare number read as years,adult,60,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.5000091827364554,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990551,,,train,sda-all,samples/GSE250346/GSM7990551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990552,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,32868,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,,age rule: bare number read as years,adult,52,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999862693944803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990552,,,train,sda-all,samples/GSE250346/GSM7990552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990553,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,22983,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,,age rule: bare number read as years,adult,52,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,521,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990553,,,train,sda-all,samples/GSE250346/GSM7990553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990554,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,45690,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,,age rule: bare number read as years,adult,47,extracted field,F,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.5000154469312097,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990554,,,train,sda-all,samples/GSE250346/GSM7990554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990555,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,35179,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,,age rule: bare number read as years,adult,47,extracted field,F,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.49998969011429245,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990555,,,train,sda-all,samples/GSE250346/GSM7990555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990556,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,26396,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,65,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.5000343218012081,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990556,,,train,sda-all,samples/GSE250346/GSM7990556,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990557,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,16431,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,65,extracted field,M,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.5000041118421052,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990557,,,train,sda-all,samples/GSE250346/GSM7990557,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM7990558,lung,disease,sarcoidosis;interstitial lung disease,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,59609,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0019338;MONDO:0015925,luna,,,age rule: bare number read as years,adult,61,extracted field,F,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999823217442545,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990558,,,train,sda-all,samples/GSE250346/GSM7990558,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990559,lung,disease,sarcoidosis;interstitial lung disease,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,46277,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0019338;MONDO:0015925,luna,,,age rule: bare number read as years,adult,61,extracted field,F,,,,,release v3,imaging-based,Xenium,hLung_97g,xenium-1.1.0.2,cell,541,counts,um,1.0,verified,0.4999862693944803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM7990559,,,train,sda-all,samples/GSE250346/GSM7990559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8505448,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,False,,27726,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, less affected",MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,adult,54,extracted field,F,,,,,release v3,imaging-based,xenium,,,cell,475,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505448,,,train,sda-all,samples/GSE250346/GSM8505448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505449,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,False,,13287,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, more affected",MONDO:0002771,luna,,,age rule: bare number read as years,aged,67,extracted field,M,,,,,release v3,imaging-based,xenium,,,cell,435,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505449,,,train,sda-all,samples/GSE250346/GSM8505449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8505450,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,55542,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, less affected",MONDO:0002771,luna,,,age rule: bare number read as years,adult,63,extracted field,M,,,,,release v3,imaging-based,xenium,,,cell,528,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505450,,,train,sda-all,samples/GSE250346/GSM8505450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505451,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,False,,32170,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, less affected",MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,70,extracted field,M,,,,,release v3,imaging-based,xenium,,,cell,494,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505451,,,train,sda-all,samples/GSE250346/GSM8505451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505452,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,female,Xenium,Xenium,False,,27533,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, less affected",MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,67,extracted field,F,,,,,release v3,imaging-based,xenium,,,cell,497,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505452,,,train,sda-all,samples/GSE250346/GSM8505452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505453,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,False,,37924,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, more affected",MONDO:0002771,luna,,,age rule: bare number read as years,adult,54,extracted field,F,,,,,release v3,imaging-based,xenium,,,cell,516,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505453,,,train,sda-all,samples/GSE250346/GSM8505453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505454,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,False,,26521,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, less affected",MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,aged,66,extracted field,M,,,,,release v3,imaging-based,xenium,,,cell,490,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505454,,,train,sda-all,samples/GSE250346/GSM8505454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8505455,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,female,Xenium,Xenium,False,,24071,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, less affected",MONDO:0002771,luna,,,age rule: bare number read as years,aged,67,extracted field,F,,,,,release v3,imaging-based,xenium,,,cell,466,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505455,,,train,sda-all,samples/GSE250346/GSM8505455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505456,lung,disease,pulmonary fibrosis;idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,57958,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, more affected",MONDO:0002771;MONDO:0800504,luna,,,age rule: bare number read as years,adult,60,extracted field,M,,,,,release v3,imaging-based,xenium,,,cell,532,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505456,,,train,sda-all,samples/GSE250346/GSM8505456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505457,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,False,,43900,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, more affected",MONDO:0002771,luna,,,age rule: bare number read as years,adult,58,extracted field,F,,,,,release v3,imaging-based,xenium,,,cell,530,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505457,,,train,sda-all,samples/GSE250346/GSM8505457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505458,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,False,,8006,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, unaffected",,luna,,,age rule: bare number read as years,adult,58,extracted field,F,,,,,release v3,imaging-based,xenium,,,cell,420,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505458,,,train,sda-all,samples/GSE250346/GSM8505458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505459,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,27074,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, unaffected",,luna,,,age rule: bare number read as years,adult,64,extracted field,M,,,,,release v3,imaging-based,xenium,,,cell,485,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505459,,,train,sda-all,samples/GSE250346/GSM8505459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8505460,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,False,,20364,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, unaffected",,luna,,,age rule: bare number read as years,adult,54,extracted field,F,,,,,release v3,imaging-based,xenium,,,cell,446,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505460,,,train,sda-all,samples/GSE250346/GSM8505460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505461,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,aged,female,Xenium,Xenium,False,,48565,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, more affected",MONDO:0002771,luna,,,age rule: bare number read as years,aged,66,extracted field,F,,,,,release v3,imaging-based,xenium,,,cell,486,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505461,,,train,sda-all,samples/GSE250346/GSM8505461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM8505462,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,18743,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, more affected",MONDO:0002771,luna,,,age rule: bare number read as years,adult,64,extracted field,M,,,,,release v3,imaging-based,xenium,,,cell,438,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505462,,,train,sda-all,samples/GSE250346/GSM8505462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505463,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,42066,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, less affected",MONDO:0002771,luna,,,age rule: bare number read as years,adult,62,extracted field,M,,,,,release v3,imaging-based,xenium,,,cell,512,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505463,,,train,sda-all,samples/GSE250346/GSM8505463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8505464,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,88753,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Xenium],GSE250346,GSE250346,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,"Lung, more affected",MONDO:0002771,luna,,,age rule: bare number read as years,adult,60,extracted field,M,,,,,release v3,imaging-based,xenium,,,cell,512,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38168317;39901013;41390915,,GSM8505464,,,train,sda-all,samples/GSE250346/GSM8505464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7978617,lung,disease,,pair of lungs,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2831,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,GSE250398,GSE250398,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000170,lungs,,luna,,"bleomycin, post-injury day 14",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7633365385053724,platform_constant,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978617,,,train,hesrt,samples/GSE250398/GSM7978617,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.44, ""life_stage"": 0.8}",uberon,low_confidence_annotation
GSM7978618,lung,disease,,pair of lungs,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3048,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,GSE250398,GSE250398,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000170,lungs,,luna,,"bleomycin, post-injury day 35",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7633365385053724,platform_constant,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978618,,,train,hesrt,samples/GSE250398/GSM7978618,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.56, ""life_stage"": 0.89}",uberon,low_confidence_annotation
GSM7978619,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2775,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,GSE250398,GSE250398,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lungs,,luna,,"bleomycin, post-injury day 14",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7633365385053724,platform_constant,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978619,,,train,hesrt,samples/GSE250398/GSM7978619,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.45, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM7978620,lung,disease,,pair of lungs,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2013,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,GSE250398,GSE250398,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000170,lungs,,luna,,"bleomycin, post-injury day 35",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7633365385053724,platform_constant,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978620,,,train,hesrt,samples/GSE250398/GSM7978620,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.59, ""life_stage"": 0.6900000000000001}",uberon,low_confidence_annotation
GSM7978621,lung,normal,,pair of lungs,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2086,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,GSE250398,GSE250398,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000170,lungs,,luna,,"control, post-injury day 0",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7633365385053724,platform_constant,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978621,,,train,hesrt,samples/GSE250398/GSM7978621,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.53, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7978622,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2436,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,GSE250398,GSE250398,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lungs,,luna,,"bleomycin, post-injury day 35",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7633365385053724,platform_constant,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978622,,,train,hesrt,samples/GSE250398/GSM7978622,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.47000000000000003, ""life_stage"": 0.8}",uberon,low_confidence_annotation
GSM7978623,lung,disease,,pair of lungs,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3464,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,GSE250398,GSE250398,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000170,lungs,,luna,,"bleomycin, post-injury day 14",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7633365385053724,platform_constant,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978623,,,train,hesrt,samples/GSE250398/GSM7978623,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM7978624,lung,normal,,pair of lungs,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2848,Histological Signatures Reveal Anti-Fibrotic Factors in Mouse and Human Lungs,GSE250398,GSE250398,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000170,lungs,,luna,,"control, post-injury day 0",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.7633365385053724,platform_constant,0.7633365385053724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40108456,,GSM7978624,,,train,hesrt,samples/GSE250398/GSM7978624,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.59, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM7980860,thyroid,normal,,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3401,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,,luna,,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.898750084115541,platform_constant,3.898750084115541,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980860,,,train,hesrt,samples/GSE250521/GSM7980860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980861,thyroid,normal,,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3839,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,,luna,,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9500000306125242,platform_constant,3.9500000306125242,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980861,,,train,hesrt,samples/GSE250521/GSM7980861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980862,thyroid,normal,,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4547,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,,luna,,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9346733920160775,platform_constant,3.9346733920160775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980862,,,train,hesrt,samples/GSE250521/GSM7980862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980863,thyroid,normal,,thyroid gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3030,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,,luna,,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9201003116036954,platform_constant,3.9201003116036954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980863,,,train,hesrt,samples/GSE250521/GSM7980863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980864,thyroid,disease,thyroid gland papillary carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2270,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0005075,luna,Papillary thyroid carcinoma,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8867497513840545,platform_constant,3.8867497513840545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980864,,,train,hesrt,samples/GSE250521/GSM7980864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980865,thyroid,disease,thyroid gland papillary carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4952,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0005075,luna,Papillary thyroid carcinoma,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.036180775881461,platform_constant,4.036180775881461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980865,,,train,hesrt,samples/GSE250521/GSM7980865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980866,thyroid,disease,thyroid gland papillary carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4524,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0005075,luna,Papillary thyroid carcinoma,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8331174983489826,platform_constant,3.8331174983489826,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980866,,,train,hesrt,samples/GSE250521/GSM7980866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980867,thyroid,disease,thyroid gland papillary carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4748,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0005075,luna,Papillary thyroid carcinoma,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9052241708332693,platform_constant,3.9052241708332693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980867,,,train,hesrt,samples/GSE250521/GSM7980867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980868,thyroid,disease,thyroid gland papillary carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1520,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0005075,luna,Locally advanced papillary thyroid carcinoma,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9102503694209068,platform_constant,3.9102503694209068,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980868,,,train,hesrt,samples/GSE250521/GSM7980868,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980869,thyroid,disease,thyroid gland papillary carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4174,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0005075,luna,Locally advanced papillary thyroid carcinoma,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.177959255555863,platform_constant,4.177959255555863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980869,,,train,hesrt,samples/GSE250521/GSM7980869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980870,thyroid,disease,thyroid gland papillary carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4633,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0005075,luna,Locally advanced papillary thyroid carcinoma,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0943180200926195,platform_constant,4.0943180200926195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980870,,,train,hesrt,samples/GSE250521/GSM7980870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980871,thyroid,disease,thyroid gland papillary carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4737,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0005075,luna,Locally advanced papillary thyroid carcinoma,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.317873153697997,platform_constant,4.317873153697997,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980871,,,train,hesrt,samples/GSE250521/GSM7980871,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980872,thyroid,disease,thyroid gland undifferentiated (anaplastic) carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4722,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0006468,luna,Anaplastic thyroid cancer,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.874578937848402,platform_constant,3.874578937848402,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980872,,,train,hesrt,samples/GSE250521/GSM7980872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980873,thyroid,disease,thyroid gland undifferentiated (anaplastic) carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2684,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0006468,luna,Anaplastic thyroid cancer,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9460731879207307,platform_constant,3.9460731879207307,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980873,,,train,hesrt,samples/GSE250521/GSM7980873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7980874,thyroid,disease,thyroid gland undifferentiated (anaplastic) carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1622,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0006468,luna,Anaplastic thyroid cancer,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.046413066516737,platform_constant,4.046413066516737,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980874,,,train,hesrt,samples/GSE250521/GSM7980874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7980875,thyroid,disease,thyroid gland undifferentiated (anaplastic) carcinoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2594,A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression,GSE250521,GSE250521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002046,Thyroid,MONDO:0006468,luna,Anaplastic thyroid cancer,none,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9914143782646585,platform_constant,3.9914143782646585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7980875,,,train,hesrt,samples/GSE250521/GSM7980875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7983358,spinal cord,disease,neoplastic meningitis;melanoma,spinal cord,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,520,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,GSE250636,GSE250636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,Melanoma leptomeningeal metastasis (LMM),MONDO:0700219;MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE250636:B,B,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.04038458778878,platform_constant,4.04038458778878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983358,,,train,hesrt,samples/GSE250636/GSM7983358,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7983359,bone,disease,melanoma,sternum,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1667,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,GSE250636,GSE250636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000975,Melanoma metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE250636:A,A,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.986538441964556,platform_constant,3.986538441964556,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983359,,,train,hesrt,samples/GSE250636/GSM7983359,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7983360,meninges,disease,neoplastic meningitis;melanoma,meninx,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3787,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,GSE250636,GSE250636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Melanoma leptomeningeal metastasis (LMM),MONDO:0700219;MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE250636:A,A,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0365385173839705,platform_constant,4.0365385173839705,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983360,,,train,hesrt,samples/GSE250636/GSM7983360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7983361,meninges,disease,neoplastic meningitis;melanoma,meninx,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2577,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,GSE250636,GSE250636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Melanoma leptomeningeal metastasis (LMM),MONDO:0700219;MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE250636:B,B,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.271153715242976,platform_constant,4.271153715242976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983361,,,train,hesrt,samples/GSE250636/GSM7983361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM7983362,meninges,disease,neoplastic meningitis;melanoma,meninx,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,637,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,GSE250636,GSE250636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Melanoma leptomeningeal metastasis (LMM),MONDO:0700219;MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE250636:B,B,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.007692300478453,platform_constant,4.007692300478453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983362,,,train,hesrt,samples/GSE250636/GSM7983362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7983363,spinal cord,disease,neoplastic meningitis;melanoma,spinal cord,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,769,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,GSE250636,GSE250636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,Melanoma leptomeningeal metastasis (LMM),MONDO:0700219;MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE250636:B,B,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.042307632481531,platform_constant,4.042307632481531,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983363,,,train,hesrt,samples/GSE250636/GSM7983363,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 0.99}",,
GSM7983364,colon,disease,melanoma,colon,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,840,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,GSE250636,GSE250636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Melanoma metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE250636:B,B,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.046153855540924,platform_constant,4.046153855540924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983364,,,train,hesrt,samples/GSE250636/GSM7983364,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7983365,other,disease,melanoma,chest wall,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1789,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,GSE250636,GSE250636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016435,Melanoma metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE250636:B,B,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.028846313992795,platform_constant,4.028846313992795,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983365,,,train,hesrt,samples/GSE250636/GSM7983365,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM7983366,other,disease,melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3263,Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease.,GSE250636,GSE250636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Melanoma metastasis,MONDO:0005105,luna,,,luna,not stated,,not stated,,GSE250636:A,A,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.334615317775617,platform_constant,4.334615317775617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38866016;39005315;39636739,,GSM7983366,,,train,hesrt,samples/GSE250636/GSM7983366,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM7986081,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3408,Double-negative B cells and DNASE1L3 colocalise with microbiota in gut-associated lymphoid tissue,GSE251693,GSE251693,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,,luna,healthy,healthy,luna,not stated,,not stated,,GSE251693:FFPE block STA,FFPE block STA,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.110449198464235,platform_constant,4.110449198464235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744839,,GSM7986081,,,train,hesrt,samples/GSE251693/GSM7986081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7986082,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2351,Double-negative B cells and DNASE1L3 colocalise with microbiota in gut-associated lymphoid tissue,GSE251693,GSE251693,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,,luna,healthy,healthy,luna,not stated,,not stated,,GSE251693:FFPE block STB,FFPE block STB,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.954093440915004,platform_constant,3.954093440915004,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38744839,,GSM7986082,,,train,hesrt,samples/GSE251693/GSM7986082,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990100,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,55400,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990100,,,train,sda-all,samples/GSE251926/GSM7990100,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990101,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,52405,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990101,,,train,sda-all,samples/GSE251926/GSM7990101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990102,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,77868,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990102,,,train,sda-all,samples/GSE251926/GSM7990102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990103,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,47217,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990103,,,train,sda-all,samples/GSE251926/GSM7990103,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990104,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,38555,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990104,,,train,sda-all,samples/GSE251926/GSM7990104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990105,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,27542,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990105,,,train,sda-all,samples/GSE251926/GSM7990105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990106,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,54899,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990106,,,train,sda-all,samples/GSE251926/GSM7990106,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990107,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,67206,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990107,,,train,sda-all,samples/GSE251926/GSM7990107,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990108,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,70879,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990108,,,train,sda-all,samples/GSE251926/GSM7990108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990109,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,80288,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990109,,,train,sda-all,samples/GSE251926/GSM7990109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990110,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,39167,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990110,,,train,sda-all,samples/GSE251926/GSM7990110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990111,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,66389,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990111,,,train,sda-all,samples/GSE251926/GSM7990111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7990112,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,68177,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990112,,,train,sda-all,samples/GSE251926/GSM7990112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990113,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,39646,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990113,,,train,sda-all,samples/GSE251926/GSM7990113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7990114,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,82583,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990114,,,train,sda-all,samples/GSE251926/GSM7990114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990115,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,63661,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990115,,,train,sda-all,samples/GSE251926/GSM7990115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990116,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,68138,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990116,,,train,sda-all,samples/GSE251926/GSM7990116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990117,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,57057,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990117,,,train,sda-all,samples/GSE251926/GSM7990117,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7990118,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Other,Open-ST,False,,40692,Open-ST: High-resolution spatial transcriptomics in 3D,GSE251926,GSE251926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,human metastatic level III cervical lymph node from 56-year old male with HNSCC,MONDO:0010150,luna,,,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,cell,28943,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,38917789,,GSM7990118,,,train,sda-all,samples/GSE251926/GSM7990118,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990295,skin,disease,ulcer disease;burn,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,467969,Single-cell and In Situ Spatial Transcriptomics of Marjolin ulcers,GSE251938,GSE251938,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Marjolin's ulcer,MONDO:0043839;MONDO:0043519,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39128494,,GSM7990295,,,train,sda-all,samples/GSE251938/GSM7990295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990473,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3834,Spatial transcriptomics of gastric cancers (Visium 10X platform),GSE251950,GSE251950,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric Cancer,MONDO:0001056,luna,gastric cancer,Gastric Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.210239215857161,platform_constant,4.210239215857161,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990473,,,train,hesrt,samples/GSE251950/GSM7990473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7990474,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4274,Spatial transcriptomics of gastric cancers (Visium 10X platform),GSE251950,GSE251950,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric Cancer,MONDO:0001056,luna,gastric cancer,Gastric Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.028525425404048,platform_constant,4.028525425404048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990474,,,train,hesrt,samples/GSE251950/GSM7990474,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM7990475,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3043,Spatial transcriptomics of gastric cancers (Visium 10X platform),GSE251950,GSE251950,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric Cancer,MONDO:0001056,luna,gastric cancer,Gastric Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.99166183320689,platform_constant,3.99166183320689,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990475,,,train,hesrt,samples/GSE251950/GSM7990475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7990476,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4244,Spatial transcriptomics of gastric cancers (Visium 10X platform),GSE251950,GSE251950,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric Cancer,MONDO:0001056,luna,gastric cancer,Gastric Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9008485164826086,platform_constant,3.9008485164826086,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990476,,,train,hesrt,samples/GSE251950/GSM7990476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990477,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3577,Spatial transcriptomics of gastric cancers (Visium 10X platform),GSE251950,GSE251950,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric Cancer,MONDO:0001056,luna,gastric cancer,Gastric Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.039648976193794,platform_constant,4.039648976193794,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990477,,,train,hesrt,samples/GSE251950/GSM7990477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7990478,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2426,Spatial transcriptomics of gastric cancers (Visium 10X platform),GSE251950,GSE251950,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric Cancer,MONDO:0001056,luna,gastric cancer,Gastric Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.920107830988812,platform_constant,3.920107830988812,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990478,,,train,hesrt,samples/GSE251950/GSM7990478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990479,unknown,disease,gastric cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2483,Spatial transcriptomics of gastric cancers (Visium 10X platform),GSE251950,GSE251950,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Gastric Cancer Metastasis,MONDO:0001056,luna,gastric cancer,Gastric Cancer Metastasis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.049560191014317,platform_constant,4.049560191014317,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990479,,,train,hesrt,samples/GSE251950/GSM7990479,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM7990480,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1882,Spatial transcriptomics of gastric cancers (Visium 10X platform),GSE251950,GSE251950,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric Cancer,MONDO:0001056,luna,gastric cancer,Gastric Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8924644867121243,platform_constant,3.8924644867121243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990480,,,train,hesrt,samples/GSE251950/GSM7990480,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990481,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3037,Spatial transcriptomics of gastric cancers (Visium 10X platform),GSE251950,GSE251950,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric Cancer,MONDO:0001056,luna,gastric cancer,Gastric Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.008508606517139,platform_constant,4.008508606517139,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990481,,,train,hesrt,samples/GSE251950/GSM7990481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7990482,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3491,Spatial transcriptomics of gastric cancers (Visium 10X platform),GSE251950,GSE251950,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric Cancer,MONDO:0001056,luna,gastric cancer,Gastric Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9707450390309296,platform_constant,3.9707450390309296,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39580151,,GSM7990482,,,train,hesrt,samples/GSE251950/GSM7990482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM7993541,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,22156,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,99,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993541,,,val,sda-all,samples/GSE252090/GSM7993541,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993542,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,9948,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,98,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993542,,,val,sda-all,samples/GSE252090/GSM7993542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993543,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,40985,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,99,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993543,,,val,sda-all,samples/GSE252090/GSM7993543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993544,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,32878,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,99,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993544,,,val,sda-all,samples/GSE252090/GSM7993544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM7993545,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,10485,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,100,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993545,,,val,sda-all,samples/GSE252090/GSM7993545,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993546,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,10656,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,98,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993546,,,val,sda-all,samples/GSE252090/GSM7993546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993547,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,14283,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,100,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993547,,,val,sda-all,samples/GSE252090/GSM7993547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993548,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,10210,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,99,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993548,,,val,sda-all,samples/GSE252090/GSM7993548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993549,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,1914,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,99,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993549,,,val,sda-all,samples/GSE252090/GSM7993549,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993550,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,15120,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,100,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993550,,,val,sda-all,samples/GSE252090/GSM7993550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993551,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,4519,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,97,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993551,,,val,sda-all,samples/GSE252090/GSM7993551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993552,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,13591,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,100,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993552,,,val,sda-all,samples/GSE252090/GSM7993552,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993553,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,7084,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,99,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993553,,,val,sda-all,samples/GSE252090/GSM7993553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993554,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,9052,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,99,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993554,,,val,sda-all,samples/GSE252090/GSM7993554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993555,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,5743,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,99,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993555,,,val,sda-all,samples/GSE252090/GSM7993555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993556,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,13004,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,99,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993556,,,val,sda-all,samples/GSE252090/GSM7993556,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993557,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,6206,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,99,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993557,,,val,sda-all,samples/GSE252090/GSM7993557,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993558,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,17905,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,119,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993558,,,val,sda-all,samples/GSE252090/GSM7993558,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993559,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,8547,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,115,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993559,,,val,sda-all,samples/GSE252090/GSM7993559,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993560,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,18026,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,120,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993560,,,val,sda-all,samples/GSE252090/GSM7993560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993561,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,4972,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,114,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993561,,,val,sda-all,samples/GSE252090/GSM7993561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993562,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,9726,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,119,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993562,,,val,sda-all,samples/GSE252090/GSM7993562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993563,brain,disease,medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Molecular Cartography,Molecular Cartography,False,,28106,Spatial single cell RNA profiles from medulloblastoma Group 3/4 tumors with oncogene aberrations,GSE252090,GSE252090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Tumor,MONDO:0007959,luna,Medulloblastoma,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,GEO series text (assay_final.csv),imaging-based,other,,,cell,119,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,40335697,,GSM7993563,,,val,sda-all,samples/GSE252090/GSM7993563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM7993714,adrenal gland,disease,adrenal cortex carcinoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1113,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses [I],GSE252108,GSE252108+GSE252113,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,ACC,MONDO:0006639,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,,,,GSM7993714,,,train,sda-all,samples/GSE252108/GSM7993714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM7993715,adrenal gland,disease,adrenal cortex carcinoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1165,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses [I],GSE252108,GSE252108+GSE252113,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,ACC,MONDO:0006639,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,,,,GSM7993715,,,train,sda-all,samples/GSE252108/GSM7993715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM7993713,adrenal gland,disease,adrenal cortex carcinoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1418,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses,GSE252113,GSE252113,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,ACC,MONDO:0006639,luna,adrenocortical carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.2538038367105339,platform_constant,0.4999911874291707,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7993713,,,train,hesrt,samples/GSE252113/GSM7993713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 0.99}",,
GSM7993716,adrenal gland,disease,adrenal cortex carcinoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1734,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses,GSE252113,GSE252113,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,ACC,MONDO:0006639,luna,adrenocortical carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.2538038367105339,platform_constant,0.5000084879572054,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7993716,,,train,hesrt,samples/GSE252113/GSM7993716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM7993717,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1734,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses,GSE252113,GSE252113,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Normal Adrenal gland,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.2732199644969258,platform_constant,0.4999956798644899,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7993717,,,train,hesrt,samples/GSE252113/GSM7993717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7993718,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1939,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses,GSE252113,GSE252113,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Normal Adrenal gland,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.2732199644969258,platform_constant,0.49998911713501887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7993718,,,train,hesrt,samples/GSE252113/GSM7993718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM7993719,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1400,Dissecting the intra- and intertumoral heterogeneity of adrenocortical carcinoma by single-cell multi-omics analyses,GSE252113,GSE252113,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Normal Adrenal gland,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.2732199644969258,platform_constant,0.49998911713501887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM7993719,,,train,hesrt,samples/GSE252113/GSM7993719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7996201,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3207,Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [Spatial Transcriptome seq],GSE252176,GSE252176,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,58825,counts,pixel,4.178250168884879,platform_constant,4.178250168884879,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38730464,,GSM7996201,,,val,hesrt,samples/GSE252176/GSM7996201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7996202,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3023,Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [Spatial Transcriptome seq],GSE252176,GSE252176,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,58825,counts,pixel,4.132750048012227,platform_constant,4.132750048012227,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38730464,,GSM7996202,,,val,hesrt,samples/GSE252176/GSM7996202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7996203,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3906,Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [Spatial Transcriptome seq],GSE252176,GSE252176,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,58825,counts,pixel,4.150249869113583,platform_constant,4.150249869113583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38730464,,GSM7996203,,,val,hesrt,samples/GSE252176/GSM7996203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM7996204,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3484,Multi-Omics molecular subtyping based on commensal microbiome predicts molecular characteristics and therapeutic response in Triple-Negative Breast Cancer [Spatial Transcriptome seq],GSE252176,GSE252176,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast tissue,MONDO:0005494,luna,triple negative breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,58825,counts,pixel,4.223749943190578,platform_constant,4.223749943190578,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38730464,,GSM7996204,,,val,hesrt,samples/GSE252176/GSM7996204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8013395,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1880,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,3.963835824936114,platform_constant,3.963835824936114,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013395,,,test,hesrt,samples/GSE253080/GSM8013395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013396,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1817,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.042876524840361,platform_constant,4.042876524840361,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013396,,,test,hesrt,samples/GSE253080/GSM8013396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013397,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2449,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,3.98780835266996,platform_constant,3.98780835266996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013397,,,test,hesrt,samples/GSE253080/GSM8013397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013398,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2360,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.050000133629758,platform_constant,4.050000133629758,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013398,,,test,hesrt,samples/GSE253080/GSM8013398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013399,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1428,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.03278673683935,platform_constant,4.03278673683935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013399,,,test,hesrt,samples/GSE253080/GSM8013399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013400,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2708,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,3.9787317860061173,platform_constant,3.9787317860061173,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013400,,,test,hesrt,samples/GSE253080/GSM8013400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013401,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2293,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.039401916199206,platform_constant,4.039401916199206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013401,,,test,hesrt,samples/GSE253080/GSM8013401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013402,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3417,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.0902850427046715,platform_constant,4.0902850427046715,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013402,,,test,hesrt,samples/GSE253080/GSM8013402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013403,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4181,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient2,Patient2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.16419195602892,platform_constant,4.16419195602892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013403,,,test,hesrt,samples/GSE253080/GSM8013403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8013404,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2953,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient2,Patient2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.043032364287294,platform_constant,4.043032364287294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013404,,,test,hesrt,samples/GSE253080/GSM8013404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013405,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3394,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient2,Patient2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.043032364287294,platform_constant,4.043032364287294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013405,,,test,hesrt,samples/GSE253080/GSM8013405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8013406,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3298,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient2,Patient2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.015027456004419,platform_constant,4.015027456004419,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013406,,,test,hesrt,samples/GSE253080/GSM8013406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8013407,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3837,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient3,Patient3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.032450976540404,platform_constant,4.032450976540404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013407,,,test,hesrt,samples/GSE253080/GSM8013407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013408,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1841,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient3,Patient3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.043032364287294,platform_constant,4.043032364287294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013408,,,test,hesrt,samples/GSE253080/GSM8013408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013409,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2851,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient3,Patient3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.043032364287294,platform_constant,4.043032364287294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013409,,,test,hesrt,samples/GSE253080/GSM8013409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8013410,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3565,Decoding Heterogeneous and Coordinated Tissue Architecture in Glioblastoma Using Spatial Transcriptomics,GSE253080,GSE253080,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,WHO Grade IV GBM,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,GSE253080:Patient3,Patient3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.02144844353098,platform_constant,4.02144844353098,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38947514;40867324,,GSM8013410,,,test,hesrt,samples/GSE253080/GSM8013410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016272,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2675,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Normal,age rule: bare number read as years,adult,61,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.93744648376846,platform_constant,5.93744648376846,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016272,,,train,hesrt,samples/GSE253199/GSM8016272,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016273,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3246,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Normal,age rule: bare number read as years,adult,61,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.767706412858211,platform_constant,4.767706412858211,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016273,,,train,hesrt,samples/GSE253199/GSM8016273,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016274,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4261,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Normal,age rule: bare number read as years,adult,55,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.339285962295545,platform_constant,5.339285962295545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016274,,,train,hesrt,samples/GSE253199/GSM8016274,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016275,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3534,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Normal,age rule: bare number read as years,adult,54,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.957491254021968,platform_constant,4.957491254021968,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016275,,,train,hesrt,samples/GSE253199/GSM8016275,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016276,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2200,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Normal,age rule: bare number read as years,adult,56,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.1397898605908265,platform_constant,5.1397898605908265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016276,,,train,hesrt,samples/GSE253199/GSM8016276,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016277,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3163,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Normal,age rule: bare number read as years,adult,61,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.337452450238914,platform_constant,6.337452450238914,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016277,,,train,hesrt,samples/GSE253199/GSM8016277,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8016278,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3085,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Obese,age rule: bare number read as years,adult,58,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.157213520919152,platform_constant,5.157213520919152,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016278,,,train,hesrt,samples/GSE253199/GSM8016278,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016279,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2996,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Obese,age rule: bare number read as years,adult,57,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.731736706465835,platform_constant,5.731736706465835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016279,,,train,hesrt,samples/GSE253199/GSM8016279,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016280,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2058,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Obese,age rule: bare number read as years,adult,55,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.143046337802123,platform_constant,5.143046337802123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016280,,,train,hesrt,samples/GSE253199/GSM8016280,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016281,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3855,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Obese,age rule: bare number read as years,adult,60,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.956349283172621,platform_constant,4.956349283172621,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016281,,,train,hesrt,samples/GSE253199/GSM8016281,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016282,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2341,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Obese,age rule: bare number read as years,adult,61,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.387388601971234,platform_constant,4.387388601971234,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016282,,,train,hesrt,samples/GSE253199/GSM8016282,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8016283,adipose tissue,disease,osteoarthritis,infrapatellar fat pad,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3034,Cell and Transcriptomic Diversity of Infrapatellar Fat Pad during Knee Osteoarthritis [Spatial Transcriptomics],GSE253199,GSE253199+GSE253200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016400,Infrapatellar Fat Pad,MONDO:0005178,luna,osteoarthritis,Obese,age rule: bare number read as years,adult,57,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.142652491531132,platform_constant,5.142652491531132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39919907,,GSM8016283,,,train,hesrt,samples/GSE253199/GSM8016283,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8019441,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2808,A spatial transcriptomics based Label-free Method for Assessment of Human Stem Cell Distribution and Effects in a Mouse Model of Lung Fibrosis,GSE253378,GSE253378,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Normal Lung,,luna,,,age rule: age with unit,not stated,9 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,0.7246376811594203,platform_constant,0.7246376811594203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1002/adtp.202300283,GSM8019441,,,train,hesrt,samples/GSE253378/GSM8019441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8019442,lung,disease,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3421,A spatial transcriptomics based Label-free Method for Assessment of Human Stem Cell Distribution and Effects in a Mouse Model of Lung Fibrosis,GSE253378,GSE253378,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung Fibrosis,,luna,lung fibrosis,,age rule: age with unit,not stated,9 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,0.7246376811594203,platform_constant,0.7246376811594203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1002/adtp.202300283,GSM8019442,,,train,hesrt,samples/GSE253378/GSM8019442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8019443,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,2916,A spatial transcriptomics based Label-free Method for Assessment of Human Stem Cell Distribution and Effects in a Mouse Model of Lung Fibrosis,GSE253378,GSE253378,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,Homo sapiens; Mus musculus,,luna,UBERON:0002048,Lung Fibrosis Treated with hMSCs,,luna,lung fibrosis,"Therapy with Normal bone marrow derived hMSC, prepared from Lonza™",luna,not stated,9 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,0.7246376811594203,platform_constant,0.7246376811594203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1002/adtp.202300283,GSM8019443,,,train,hesrt,samples/GSE253378/GSM8019443,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8019444,lung,disease,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3739,A spatial transcriptomics based Label-free Method for Assessment of Human Stem Cell Distribution and Effects in a Mouse Model of Lung Fibrosis,GSE253378,GSE253378,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung Fibrosis,,luna,lung fibrosis,,age rule: age with unit,not stated,9 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,0.5076142131979695,platform_constant,0.5076142131979695,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1002/adtp.202300283,GSM8019444,,,train,hesrt,samples/GSE253378/GSM8019444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8019445,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,3208,A spatial transcriptomics based Label-free Method for Assessment of Human Stem Cell Distribution and Effects in a Mouse Model of Lung Fibrosis,GSE253378,GSE253378,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,Homo sapiens; Mus musculus,,luna,UBERON:0002048,Lung Fibrosis Treated with hMSCs,,luna,lung fibrosis,"Therapy with Normal bone marrow derived hMSC, prepared from Lonza™",luna,not stated,9 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,0.5076142131979695,platform_constant,0.5076142131979695,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1002/adtp.202300283,GSM8019445,,,train,hesrt,samples/GSE253378/GSM8019445,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8020616,brain,disease,glioblastoma,brain,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2807,Spatial transcriptomic sequencing of day 7 tumors in G422TN-GBM model,GSE253428,GSE253428,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain-G422TN-GBM,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31432,counts,um,1.0,verified,3.3606570410234076,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42474078,,GSM8020616,,,train,sda-all,samples/GSE253428/GSM8020616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.8300000000000001, ""uberon"": 0.92, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8020736,kidney,disease,minimal change disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,55061,Nanostring CosMx 980-plex RNA profiling of human kidney biopsy and nephrectomy,GSE253439,GSE253439,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Three biopsies with minimal change disease,MONDO:0006835,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40399382,,GSM8020736,,,train,sda-all,samples/GSE253439/GSM8020736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8020737,kidney,disease,IgA glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,68118,Nanostring CosMx 980-plex RNA profiling of human kidney biopsy and nephrectomy,GSE253439,GSE253439,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Three biopsies with  IgA nephropathy,MONDO:0005342,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40399382,,GSM8020737,,,train,sda-all,samples/GSE253439/GSM8020737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8020738,kidney,disease,IgA glomerulonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,60170,Nanostring CosMx 980-plex RNA profiling of human kidney biopsy and nephrectomy,GSE253439,GSE253439,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Three biopsies with  IgA nephropathy,MONDO:0005342,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40399382,,GSM8020738,,,train,sda-all,samples/GSE253439/GSM8020738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8020739,kidney,disease,pyelonephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,65971,Nanostring CosMx 980-plex RNA profiling of human kidney biopsy and nephrectomy,GSE253439,GSE253439,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Four nephrectomy samples  with advanced pyelonephritis,MONDO:0006939,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40399382,,GSM8020739,,,train,sda-all,samples/GSE253439/GSM8020739,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021238,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2458,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,80,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021238,,,train,sda-all,samples/GSE253474/GSM8021238,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021239,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2717,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,80,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021239,,,train,sda-all,samples/GSE253474/GSM8021239,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021240,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,749,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,57,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021240,,,train,sda-all,samples/GSE253474/GSM8021240,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021241,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,602,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,57,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021241,,,train,sda-all,samples/GSE253474/GSM8021241,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021242,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1393,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,86,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021242,,,train,sda-all,samples/GSE253474/GSM8021242,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021243,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1759,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,86,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021243,,,train,sda-all,samples/GSE253474/GSM8021243,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021244,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,47,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,73,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,38377798,,GSM8021244,,,train,sda-all,samples/GSE253474/GSM8021244,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021245,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,39,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,73,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,38377798,,GSM8021245,,,train,sda-all,samples/GSE253474/GSM8021245,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021246,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1131,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021246,,,train,sda-all,samples/GSE253474/GSM8021246,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021247,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2014,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021247,,,train,sda-all,samples/GSE253474/GSM8021247,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021248,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1304,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021248,,,train,sda-all,samples/GSE253474/GSM8021248,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021249,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1940,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021249,,,train,sda-all,samples/GSE253474/GSM8021249,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021250,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1051,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,85,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021250,,,train,sda-all,samples/GSE253474/GSM8021250,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021251,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1478,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,85,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021251,,,train,sda-all,samples/GSE253474/GSM8021251,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021252,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,916,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,86,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021252,,,train,sda-all,samples/GSE253474/GSM8021252,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021253,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,833,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,86,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021253,,,train,sda-all,samples/GSE253474/GSM8021253,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021254,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2440,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,75,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021254,,,train,sda-all,samples/GSE253474/GSM8021254,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021255,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2851,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,75,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021255,,,train,sda-all,samples/GSE253474/GSM8021255,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021256,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,671,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021256,,,train,sda-all,samples/GSE253474/GSM8021256,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021257,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,944,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021257,,,train,sda-all,samples/GSE253474/GSM8021257,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021258,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,565,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,53,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021258,,,train,sda-all,samples/GSE253474/GSM8021258,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021259,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1232,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,53,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021259,,,train,sda-all,samples/GSE253474/GSM8021259,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021260,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1150,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021260,,,train,sda-all,samples/GSE253474/GSM8021260,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021261,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2297,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021261,,,train,sda-all,samples/GSE253474/GSM8021261,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021262,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,799,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021262,,,train,sda-all,samples/GSE253474/GSM8021262,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021263,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1134,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021263,,,train,sda-all,samples/GSE253474/GSM8021263,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021264,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,984,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,87,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021264,,,train,sda-all,samples/GSE253474/GSM8021264,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021265,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1018,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,87,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021265,,,train,sda-all,samples/GSE253474/GSM8021265,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021266,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1268,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021266,,,train,sda-all,samples/GSE253474/GSM8021266,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021267,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1148,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021267,,,train,sda-all,samples/GSE253474/GSM8021267,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021268,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,872,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021268,,,train,sda-all,samples/GSE253474/GSM8021268,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021269,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1954,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,57,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021269,,,train,sda-all,samples/GSE253474/GSM8021269,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021270,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2281,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,80,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021270,,,train,sda-all,samples/GSE253474/GSM8021270,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021271,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2918,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,80,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021271,,,train,sda-all,samples/GSE253474/GSM8021271,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021272,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,673,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,57,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021272,,,train,sda-all,samples/GSE253474/GSM8021272,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021273,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,744,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,57,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021273,,,train,sda-all,samples/GSE253474/GSM8021273,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021274,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1308,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,86,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021274,,,train,sda-all,samples/GSE253474/GSM8021274,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021275,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1257,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,86,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021275,,,train,sda-all,samples/GSE253474/GSM8021275,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021276,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,681,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,73,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,38377798,,GSM8021276,,,train,sda-all,samples/GSE253474/GSM8021276,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021277,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1040,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,73,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,38377798,,GSM8021277,,,train,sda-all,samples/GSE253474/GSM8021277,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021278,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,782,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021278,,,train,sda-all,samples/GSE253474/GSM8021278,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021279,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2343,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021279,,,train,sda-all,samples/GSE253474/GSM8021279,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021280,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1127,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021280,,,train,sda-all,samples/GSE253474/GSM8021280,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021281,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2054,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021281,,,train,sda-all,samples/GSE253474/GSM8021281,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021282,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,964,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,85,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021282,,,train,sda-all,samples/GSE253474/GSM8021282,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021283,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1578,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,85,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021283,,,train,sda-all,samples/GSE253474/GSM8021283,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021284,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,780,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,86,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021284,,,train,sda-all,samples/GSE253474/GSM8021284,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021285,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,993,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,86,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021285,,,train,sda-all,samples/GSE253474/GSM8021285,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021286,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2361,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,75,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021286,,,train,sda-all,samples/GSE253474/GSM8021286,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021287,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3106,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,75,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021287,,,train,sda-all,samples/GSE253474/GSM8021287,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021288,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,760,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021288,,,train,sda-all,samples/GSE253474/GSM8021288,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021289,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,924,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021289,,,train,sda-all,samples/GSE253474/GSM8021289,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021290,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,608,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,53,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021290,,,train,sda-all,samples/GSE253474/GSM8021290,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021291,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1228,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,53,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021291,,,train,sda-all,samples/GSE253474/GSM8021291,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021292,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1318,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021292,,,train,sda-all,samples/GSE253474/GSM8021292,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8021293,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2068,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021293,,,train,sda-all,samples/GSE253474/GSM8021293,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021294,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,882,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021294,,,train,sda-all,samples/GSE253474/GSM8021294,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021295,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1057,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021295,,,train,sda-all,samples/GSE253474/GSM8021295,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021296,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1160,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,87,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021296,,,train,sda-all,samples/GSE253474/GSM8021296,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021297,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1402,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,87,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021297,,,train,sda-all,samples/GSE253474/GSM8021297,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021298,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1645,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021298,,,train,sda-all,samples/GSE253474/GSM8021298,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021299,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,613,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021299,,,train,sda-all,samples/GSE253474/GSM8021299,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021300,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,943,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021300,,,train,sda-all,samples/GSE253474/GSM8021300,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021301,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,2181,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,57,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021301,,,train,sda-all,samples/GSE253474/GSM8021301,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021302,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1170,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,87,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021302,,,train,sda-all,samples/GSE253474/GSM8021302,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021303,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1256,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,87,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021303,,,train,sda-all,samples/GSE253474/GSM8021303,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021304,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,437,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021304,,,train,sda-all,samples/GSE253474/GSM8021304,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021305,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,436,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021305,,,train,sda-all,samples/GSE253474/GSM8021305,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021306,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1321,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021306,,,train,sda-all,samples/GSE253474/GSM8021306,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021307,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1691,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021307,,,train,sda-all,samples/GSE253474/GSM8021307,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021308,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1137,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,83,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021308,,,train,sda-all,samples/GSE253474/GSM8021308,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021309,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1111,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,83,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021309,,,train,sda-all,samples/GSE253474/GSM8021309,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021310,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,786,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,53,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021310,,,train,sda-all,samples/GSE253474/GSM8021310,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021311,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,924,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021311,,,train,sda-all,samples/GSE253474/GSM8021311,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021312,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2534,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021312,,,train,sda-all,samples/GSE253474/GSM8021312,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021313,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1338,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021313,,,train,sda-all,samples/GSE253474/GSM8021313,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021314,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1346,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021314,,,train,sda-all,samples/GSE253474/GSM8021314,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021315,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1901,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,85,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021315,,,train,sda-all,samples/GSE253474/GSM8021315,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021316,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2152,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,85,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021316,,,train,sda-all,samples/GSE253474/GSM8021316,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021317,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1647,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,75,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021317,,,train,sda-all,samples/GSE253474/GSM8021317,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021318,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1619,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,75,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021318,,,train,sda-all,samples/GSE253474/GSM8021318,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021319,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2043,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,73,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021319,,,train,sda-all,samples/GSE253474/GSM8021319,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021320,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1882,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,73,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021320,,,train,sda-all,samples/GSE253474/GSM8021320,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021321,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1337,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021321,,,train,sda-all,samples/GSE253474/GSM8021321,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021322,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,972,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021322,,,train,sda-all,samples/GSE253474/GSM8021322,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021323,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1086,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021323,,,train,sda-all,samples/GSE253474/GSM8021323,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021324,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,720,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021324,,,train,sda-all,samples/GSE253474/GSM8021324,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021325,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1922,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,80,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021325,,,train,sda-all,samples/GSE253474/GSM8021325,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021326,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1815,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,80,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021326,,,train,sda-all,samples/GSE253474/GSM8021326,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021327,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,851,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,86,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021327,,,train,sda-all,samples/GSE253474/GSM8021327,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021328,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1313,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,87,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021328,,,train,sda-all,samples/GSE253474/GSM8021328,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021329,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1234,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,87,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021329,,,train,sda-all,samples/GSE253474/GSM8021329,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021330,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,446,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021330,,,train,sda-all,samples/GSE253474/GSM8021330,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021331,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,359,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021331,,,train,sda-all,samples/GSE253474/GSM8021331,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021332,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1476,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021332,,,train,sda-all,samples/GSE253474/GSM8021332,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021333,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1458,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,81,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021333,,,train,sda-all,samples/GSE253474/GSM8021333,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021334,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,987,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,83,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021334,,,train,sda-all,samples/GSE253474/GSM8021334,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021335,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1178,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,83,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021335,,,train,sda-all,samples/GSE253474/GSM8021335,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021336,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,711,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,adult,53,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021336,,,train,sda-all,samples/GSE253474/GSM8021336,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021337,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1074,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021337,,,train,sda-all,samples/GSE253474/GSM8021337,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021338,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2144,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021338,,,train,sda-all,samples/GSE253474/GSM8021338,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021339,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1279,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021339,,,train,sda-all,samples/GSE253474/GSM8021339,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021340,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1279,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,72,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021340,,,train,sda-all,samples/GSE253474/GSM8021340,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021341,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1692,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,85,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021341,,,train,sda-all,samples/GSE253474/GSM8021341,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021342,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2202,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,85,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021342,,,train,sda-all,samples/GSE253474/GSM8021342,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021343,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1775,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,75,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021343,,,train,sda-all,samples/GSE253474/GSM8021343,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021344,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1603,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,75,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021344,,,train,sda-all,samples/GSE253474/GSM8021344,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021345,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1947,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,73,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021345,,,train,sda-all,samples/GSE253474/GSM8021345,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021346,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2468,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,73,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021346,,,train,sda-all,samples/GSE253474/GSM8021346,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021347,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1353,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021347,,,train,sda-all,samples/GSE253474/GSM8021347,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021348,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,951,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,70,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021348,,,train,sda-all,samples/GSE253474/GSM8021348,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021349,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1076,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021349,,,train,sda-all,samples/GSE253474/GSM8021349,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021350,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,655,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021350,,,train,sda-all,samples/GSE253474/GSM8021350,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021351,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2052,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,80,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021351,,,train,sda-all,samples/GSE253474/GSM8021351,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021352,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1738,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,80,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021352,,,train,sda-all,samples/GSE253474/GSM8021352,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8021353,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,632,In situ single-cell profiling sheds light on IFI27 localisation during SARS-CoV-2 infection,GSE253474,GSE253474,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,rapid autopsy lung,MONDO:0100096,luna,COVID-19,,age rule: bare number read as years,aged,86,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,38377798,,GSM8021353,,,train,sda-all,samples/GSE253474/GSM8021353,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8022509,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,296,Mouse uterine gene expressions during peri-implantation period,GSE253520,GSE253520,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,uterus,,luna,,"pregnancy day 4, wildtype",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.279684859558498,platform_constant,4.279684859558498,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39377223;41803091,,GSM8022509,,,train,hesrt,samples/GSE253520/GSM8022509,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8022510,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,502,Mouse uterine gene expressions during peri-implantation period,GSE253520,GSE253520,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,uterus,,luna,,"pregnancy day 6, wildtype, implantation site",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.278925726244035,platform_constant,4.278925726244035,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39377223;41803091,,GSM8022510,,,train,hesrt,samples/GSE253520/GSM8022510,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM9191330,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,508,Mouse uterine gene expressions during peri-implantation period,GSE253520,GSE253520,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,uterus,,luna,,"pregnancy day 5, wildtype, implantation site",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.280444020926789,platform_constant,4.280444020926789,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39377223;41803091,,GSM9191330,,,train,hesrt,samples/GSE253520/GSM9191330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8023885,breast,normal,,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,2591,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Normal mammary tissues,,luna,,ddH2O (pH6),luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.531403817084144,platform_constant,17.531403817084144,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023885,,,test,hesrt,samples/GSE253585/GSM8023885,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023886,breast,normal,,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,2543,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Normal mammary tissues,,luna,,ddH2O (pH6),luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.486965632673993,platform_constant,17.486965632673993,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023886,,,test,hesrt,samples/GSE253585/GSM8023886,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8023887,breast,normal,,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,4072,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Normal mammary tissues,,luna,,ddH2O (pH6),luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.23358792798867,platform_constant,17.23358792798867,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023887,,,test,hesrt,samples/GSE253585/GSM8023887,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023888,breast,normal,,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3628,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Normal mammary tissues,,luna,,ddH2O (pH6),luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.10297591178625,platform_constant,17.10297591178625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023888,,,test,hesrt,samples/GSE253585/GSM8023888,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023889,breast,disease,breast carcinoma,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,1506,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Microlesions,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.397978581497835,platform_constant,17.397978581497835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023889,,,test,hesrt,samples/GSE253585/GSM8023889,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.88, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8023890,breast,disease,breast carcinoma,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,2389,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Microlesions,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,16.522405330265407,platform_constant,16.522405330265407,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023890,,,test,hesrt,samples/GSE253585/GSM8023890,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8023891,breast,disease,cancer;epithelial neoplasm,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3213,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Microlesions,MONDO:0004992;MONDO:0005626,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.39647351059275,platform_constant,17.39647351059275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023891,,,test,hesrt,samples/GSE253585/GSM8023891,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.59, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8023892,breast,disease,breast carcinoma,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3840,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Microlesions,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,18.247091382597024,platform_constant,18.247091382597024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023892,,,test,hesrt,samples/GSE253585/GSM8023892,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8023893,breast,disease,breast carcinoma,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3636,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Microlesions,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,18.387631280584174,platform_constant,18.387631280584174,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023893,,,test,hesrt,samples/GSE253585/GSM8023893,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.67, ""uberon"": 0.89, ""life_stage"": 0.98}",,
GSM8023894,breast,disease,breast cancer;epithelial neoplasm,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3930,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Microlesions,MONDO:0007254;MONDO:0005626,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,18.24726859531423,platform_constant,18.24726859531423,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023894,,,test,hesrt,samples/GSE253585/GSM8023894,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.9, ""disease_status"": 0.55, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8023895,breast,disease,breast carcinoma,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3150,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Microlesions,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.233532137714068,platform_constant,17.233532137714068,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023895,,,test,hesrt,samples/GSE253585/GSM8023895,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8023896,breast,disease,breast carcinoma,mammary gland,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3928,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001911,Microlesions,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.102812319218103,platform_constant,17.102812319218103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023896,,,test,hesrt,samples/GSE253585/GSM8023896,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8023897,breast,disease,breast carcinoma,breast,tumour tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3716,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000310,Breast tumor,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,18.367233727369587,platform_constant,18.367233727369587,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023897,,,test,hesrt,samples/GSE253585/GSM8023897,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023898,breast,disease,breast carcinoma,breast,tumour tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,2397,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000310,Breast tumor,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,18.367543502765205,platform_constant,18.367543502765205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023898,,,test,hesrt,samples/GSE253585/GSM8023898,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023899,breast,disease,breast carcinoma,breast,tumour tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3799,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000310,Breast tumor,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,18.367791334366903,platform_constant,18.367791334366903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023899,,,test,hesrt,samples/GSE253585/GSM8023899,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8023900,breast,disease,breast carcinoma,breast,tumour tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,1185,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000310,Breast tumor,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,18.32014490417995,platform_constant,18.32014490417995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023900,,,test,hesrt,samples/GSE253585/GSM8023900,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8023901,breast,disease,breast carcinoma,breast,tumour tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,1648,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000310,Breast tumor,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.69543101837034,platform_constant,17.69543101837034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023901,,,test,hesrt,samples/GSE253585/GSM8023901,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8023902,breast,disease,breast carcinoma,breast,tumour tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3304,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000310,Breast tumor,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.740457560401865,platform_constant,17.740457560401865,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023902,,,test,hesrt,samples/GSE253585/GSM8023902,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8023903,breast,disease,breast carcinoma,breast,tumour tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,2912,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000310,Breast tumor,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.87686385184453,platform_constant,17.87686385184453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023903,,,test,hesrt,samples/GSE253585/GSM8023903,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8023904,breast,disease,breast carcinoma,breast,tumour tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,2898,Deconvolution of regulatory T cell heterogeneity identifies cycling precursors as conductors of immune escape during breast carcinoma progression [Visium],GSE253585,GSE253585,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000310,Breast tumor,MONDO:0004989,luna,,"N-Nitroso-N-MethylUrea (NMU, 50mg/kg, twice, dissolved in pH6 ddH2O",luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,17.74022783909607,platform_constant,17.74022783909607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41997138,,GSM8023904,,,test,hesrt,samples/GSE253585/GSM8023904,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8026844,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),1575,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,PBS inoculated,age rule: age with unit,adult,13 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.1455665611658645,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026844,,,train,sda-all,samples/GSE253710/GSM8026844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026845,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),2119,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,PBS inoculated,age rule: age with unit,adult,13 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.1423441623188575,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026845,,,train,sda-all,samples/GSE253710/GSM8026845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026846,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),2065,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,PBS inoculated,age rule: age with unit,adult,13 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.142496675681384,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026846,,,train,sda-all,samples/GSE253710/GSM8026846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026847,brain,disease,infectious disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),1571,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005550,luna,,PBS inoculated,age rule: age with unit,adult,13 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.130546288677304,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026847,,,train,sda-all,samples/GSE253710/GSM8026847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8026848,brain,disease,disease of primarily extrinsic mechanism,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),2598,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:7770010,luna,,PBS inoculated,age rule: age with unit,adult,13 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.149124038634425,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026848,,,train,sda-all,samples/GSE253710/GSM8026848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8026849,brain,disease,disease of primarily extrinsic mechanism,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),1549,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:7770010,luna,,PBS inoculated,age rule: age with unit,adult,13 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.131523721494264,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026849,,,train,sda-all,samples/GSE253710/GSM8026849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8026850,brain,disease,infectious disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),2087,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005550,luna,,PBS inoculated,age rule: age with unit,adult,13.5 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.147865075245636,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026850,,,train,sda-all,samples/GSE253710/GSM8026850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026851,brain,disease,infectious disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),1827,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005550,luna,,PBS inoculated,age rule: age with unit,adult,13.5 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.142808297149267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026851,,,train,sda-all,samples/GSE253710/GSM8026851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8026852,brain,disease,infectious disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),2056,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005550,luna,,PBS inoculated,age rule: age with unit,adult,13.5 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.11699276064244,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026852,,,train,sda-all,samples/GSE253710/GSM8026852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8026853,brain,disease,influenza,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),2074,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005812,luna,,Influenza virus inoculated,age rule: age with unit,adult,13.5 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.088580673995816,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026853,,,train,sda-all,samples/GSE253710/GSM8026853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026854,brain,disease,influenza,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),2494,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005812,luna,,Influenza virus inoculated,age rule: age with unit,adult,13.5 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.223367596136971,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026854,,,train,sda-all,samples/GSE253710/GSM8026854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8026855,brain,disease,influenza,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),1948,Respiratory infection with influenza A virus delays remyelination and alters oligodendrocyte metabolism.,GSE253710,GSE253710,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005812,luna,,Influenza virus inoculated,age rule: age with unit,adult,13.5 weeks,extracted field,M,,,,,release v3,sequencing-based,Visium,,,spot,36178,counts,um,1.0,verified,4.143473316311079,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39104416,,GSM8026855,,,train,sda-all,samples/GSE253710/GSM8026855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8028753,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E-like (heuristic),1216,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Spatial Transcriptomics],GSE253850,GSE253850+GSE253852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,adult adrenal gland,,luna,,,age rule: age in years,adult,52 years,extracted field,Male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.551885118633454,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8028753,,,train,sda-all,samples/GSE253850/GSM8028753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8028754,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E-like (heuristic),2609,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Spatial Transcriptomics],GSE253850,GSE253850+GSE253852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,adult adrenal gland,,luna,,,age rule: age in years,adult,61 years,extracted field,Female,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.550215855995936,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8028754,,,train,sda-all,samples/GSE253850/GSM8028754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8028755,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E-like (heuristic),1361,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Spatial Transcriptomics],GSE253850,GSE253850+GSE253852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,adult adrenal gland,,luna,,,age rule: age in years,adult,21 years,extracted field,Male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.5542178605123915,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8028755,,,train,sda-all,samples/GSE253850/GSM8028755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8028756,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E-like (heuristic),1798,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Spatial Transcriptomics],GSE253850,GSE253850+GSE253852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,adult adrenal gland,,luna,,,age rule: age in years,adult,19 years,extracted field,Female,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.553005110575694,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8028756,,,train,sda-all,samples/GSE253850/GSM8028756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8874474,adrenal gland,normal,,adrenal gland,primary tissue,Mus musculus,house mouse,adult,male,Visium HD,Visium HD,True,H&E-like (heuristic),276508,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover,GSE253852,GSE253852,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002369,adult adrenal gland,,luna,,,age rule: age with unit,adult,8 weeks,extracted field,Male,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,32285,counts,um,1.0,verified,1.2008360163485663,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8874474,,,train,sda-all,samples/GSE253852/GSM8874474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8874475,adrenal gland,normal,,adrenal gland,primary tissue,Mus musculus,house mouse,adult,female,Visium HD,Visium HD,True,H&E-like (heuristic),254720,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover,GSE253852,GSE253852,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002369,adult adrenal gland,,luna,,,age rule: age with unit,adult,8 weeks,extracted field,Female,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,32285,counts,um,1.0,verified,0.9325438014927191,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8874475,,,train,sda-all,samples/GSE253852/GSM8874475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8030977,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,49625,Conserved dorsal horn neuron subtype-specific enhancers are implicated in the genetic risk of chronic pain [Mouse Xenium],GSE253951,GSE253951,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,,luna,adult,0.19,extracted field,male,,,,,release v3,imaging-based,Xenium,Xenium Mouse Brain Gene Expression,xenium-1.6.0.8,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39453813,,GSM8030977,,,train,sda-all,samples/GSE253951/GSM8030977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM8030978,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,32448,Conserved dorsal horn neuron subtype-specific enhancers are implicated in the genetic risk of chronic pain [Mouse Xenium],GSE253951,GSE253951,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,,luna,adult,0.19,extracted field,female,,,,,release v3,imaging-based,Xenium,Xenium Mouse Brain Gene Expression,xenium-1.6.0.8,cell,541,counts,um,1.0,verified,0.5000160462130937,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39453813,,GSM8030978,,,train,sda-all,samples/GSE253951/GSM8030978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM8032725,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Stereo-seq,Stereo-seq,False,,38298,Injury-Induced CLU-Positive Cardiomyocytes Drive Metabolic Reprogramming of Macrophage Function in Heart Regeneration [stero-seq],GSE254056,GSE254056,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,GFP overexpressed,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,stero-seq,,,bin,26463,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41205597,,GSM8032725,,,val,sda-all,samples/GSE254056/GSM8032725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8032726,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Stereo-seq,Stereo-seq,False,,34279,Injury-Induced CLU-Positive Cardiomyocytes Drive Metabolic Reprogramming of Macrophage Function in Heart Regeneration [stero-seq],GSE254056,GSE254056,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,Clu overexpressed,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,stero-seq,,,bin,26817,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41205597,,GSM8032726,,,val,sda-all,samples/GSE254056/GSM8032726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8033213,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,118945,Postnatal Subventricular Zone Injury Predicts Motor Impairment in Preterm Infants Following Intestinal Disease,GSE254087,GSE254087,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole brain,,luna,,control,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000059143600663,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8033213,,,train,sda-all,samples/GSE254087/GSM8033213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8033214,brain,disease,intestinal disorder;peritonitis,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,95892,Postnatal Subventricular Zone Injury Predicts Motor Impairment in Preterm Infants Following Intestinal Disease,GSE254087,GSE254087,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole brain,MONDO:0005020;MONDO:1010128,luna,,peritonitis,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999872652021649,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8033214,,,train,sda-all,samples/GSE254087/GSM8033214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.92}",,
GSM8035258,brain,disease,brain injury,cerebral cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2743,Dynamic fibroblast-immune interactions shape recovery after brain injury,GSE254164,GSE254164,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000956,Brain,MONDO:0043510,mondo_predicate (Luna: perturbation),,Rest and PT injury,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.195919015253666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40903576,,GSM8035258,,,train,sda-all,samples/GSE254164/GSM8035258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.63, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8035259,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),1925,Dynamic fibroblast-immune interactions shape recovery after brain injury,GSE254164,GSE254164,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0043510,mondo_predicate (Luna: perturbation),,PT injury,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.19353584438107,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40903576,,GSM8035259,,,train,sda-all,samples/GSE254164/GSM8035259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.29, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8035260,brain,disease,brain injury,cerebral cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2170,Dynamic fibroblast-immune interactions shape recovery after brain injury,GSE254164,GSE254164,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000956,Brain,MONDO:0043510,mondo_predicate (Luna: perturbation),,PT injury,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.338095616480534,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40903576,,GSM8035260,,,train,sda-all,samples/GSE254164/GSM8035260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.46, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8035261,brain,disease,brain injury,cerebral cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2502,Dynamic fibroblast-immune interactions shape recovery after brain injury,GSE254164,GSE254164,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000956,Brain,MONDO:0043510,mondo_predicate (Luna: perturbation),,PT injury,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.479491704876656,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40903576,,GSM8035261,,,train,sda-all,samples/GSE254164/GSM8035261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.51, ""life_stage"": 0.93}",disease_status;uberon,low_confidence_annotation
GSM8041061,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4160,High-resolution analysis of mononuclear phagocytes reveals clinically relevant markers in human colo-rectal liver metastasis - Visium Spatial Transcriptomics,GSE254364,GSE254364,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,CLM,MONDO:1060297,luna,colo-rectal liver metastasis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.032308285759785,platform_constant,4.032308285759785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36652202,,GSM8041061,,,test,hesrt,samples/GSE254364/GSM8041061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8041062,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3070,High-resolution analysis of mononuclear phagocytes reveals clinically relevant markers in human colo-rectal liver metastasis - Visium Spatial Transcriptomics,GSE254364,GSE254364,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,CLM,MONDO:1060297,luna,colo-rectal liver metastasis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9976444703163354,platform_constant,3.9976444703163354,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,36652202,,GSM8041062,,,test,hesrt,samples/GSE254364/GSM8041062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8047864,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2207,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.908928593318572,platform_constant,3.908928593318572,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047864,,,train,hesrt,samples/GSE254652/GSM8047864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047865,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1948,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,CTRL,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.067857261231787,platform_constant,4.067857261231787,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047865,,,train,hesrt,samples/GSE254652/GSM8047865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047866,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1220,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.028571531702853,platform_constant,4.028571531702853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047866,,,train,hesrt,samples/GSE254652/GSM8047866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047867,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2238,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,T-bet KO,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.024999937934508,platform_constant,4.024999937934508,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047867,,,train,hesrt,samples/GSE254652/GSM8047867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8047868,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,592,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.0918920251239,platform_constant,4.0918920251239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047868,,,train,hesrt,samples/GSE254652/GSM8047868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047869,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,637,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.064922666835724,platform_constant,4.064922666835724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047869,,,train,hesrt,samples/GSE254652/GSM8047869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047870,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,833,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.124324291329729,platform_constant,4.124324291329729,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047870,,,train,hesrt,samples/GSE254652/GSM8047870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047871,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3224,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.117857088913223,platform_constant,4.117857088913223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047871,,,train,hesrt,samples/GSE254652/GSM8047871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047872,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2048,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.09821426214956,platform_constant,4.09821426214956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047872,,,train,hesrt,samples/GSE254652/GSM8047872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047873,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1877,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.012499803588139,platform_constant,4.012499803588139,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047873,,,train,hesrt,samples/GSE254652/GSM8047873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8047874,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2222,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9393937818182017,platform_constant,3.9393937818182017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047874,,,train,hesrt,samples/GSE254652/GSM8047874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047875,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2213,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,CTRL,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9696968585454555,platform_constant,3.9696968585454555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047875,,,train,hesrt,samples/GSE254652/GSM8047875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8047876,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2708,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,CTRL,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.04107151765685,platform_constant,4.04107151765685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047876,,,train,hesrt,samples/GSE254652/GSM8047876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047877,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2244,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,T-bet KO,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.073214366363932,platform_constant,4.073214366363932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047877,,,train,hesrt,samples/GSE254652/GSM8047877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8047878,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2528,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,T-bet KO,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9696968585454555,platform_constant,3.9696968585454555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047878,,,train,hesrt,samples/GSE254652/GSM8047878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047879,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2034,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.122604529784976,platform_constant,4.122604529784976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047879,,,train,hesrt,samples/GSE254652/GSM8047879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047880,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1910,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.006060352076387,platform_constant,4.006060352076387,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047880,,,train,hesrt,samples/GSE254652/GSM8047880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047881,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1922,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.078350296864351,platform_constant,4.078350296864351,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047881,,,train,hesrt,samples/GSE254652/GSM8047881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047882,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1640,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.0453611098593205,platform_constant,4.0453611098593205,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047882,,,train,hesrt,samples/GSE254652/GSM8047882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047883,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2553,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.1422571805497697,platform_constant,3.1422571805497697,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047883,,,train,hesrt,samples/GSE254652/GSM8047883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8047884,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2498,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.7326161140602196,platform_constant,3.7326161140602196,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047884,,,train,hesrt,samples/GSE254652/GSM8047884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047885,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2002,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.3574468977511565,platform_constant,4.3574468977511565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047885,,,train,hesrt,samples/GSE254652/GSM8047885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8047886,spleen,disease,malaria,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1711,Comparing 10x Visium spatial transcriptomic technologies,GSE254652,GSE254652,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,MONDO:0005136,luna,malaria infection,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.2250969397902605,platform_constant,3.2250969397902605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40156041;41278534,,GSM8047886,,,train,hesrt,samples/GSE254652/GSM8047886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8058242,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2291,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,low grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.045871740007336,platform_constant,7.045871740007336,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058242,,,train,hesrt,samples/GSE254829/GSM8058242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058243,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2172,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,high grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.04587174000728,platform_constant,7.04587174000728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058243,,,train,hesrt,samples/GSE254829/GSM8058243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058244,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2118,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,low grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.019042580984585,platform_constant,7.019042580984585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058244,,,train,hesrt,samples/GSE254829/GSM8058244,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058245,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2635,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,high grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.111111293155474,platform_constant,7.111111293155474,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058245,,,train,hesrt,samples/GSE254829/GSM8058245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8058246,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2682,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,low grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.0844369538887015,platform_constant,7.0844369538887015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058246,,,train,hesrt,samples/GSE254829/GSM8058246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8058248,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2392,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,high grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.019042580984585,platform_constant,7.019042580984585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058248,,,train,hesrt,samples/GSE254829/GSM8058248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058249,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2119,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,low grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058249,,,train,hesrt,samples/GSE254829/GSM8058249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058250,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2689,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,low grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058250,,,train,hesrt,samples/GSE254829/GSM8058250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8058251,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2864,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,low grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058251,,,train,hesrt,samples/GSE254829/GSM8058251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058252,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2238,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,low grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058252,,,train,hesrt,samples/GSE254829/GSM8058252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8058253,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1484,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,low grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058253,,,train,hesrt,samples/GSE254829/GSM8058253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058254,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1893,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,low grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058254,,,train,hesrt,samples/GSE254829/GSM8058254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8058255,pancreas,disease,pancreas disorder;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2573,PanIN and CAF Transitions in Pancreatic Carcinogenesis Revealed with Spatial Data Integration,GSE254829,GSE254829,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0002356;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,high grade,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,10.1016/j.cels.2024.07.001,GSM8058255,,,train,hesrt,samples/GSE254829/GSM8058255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8059173,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7088,Spatial transcriptomics reveals C10 tumor transcriptomic changes generated by Smarta cell transfer,GSE254861,GSE254861,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,,PBS and Smarta,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.979048860590122,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42313973,,GSM8059173,,,train,sda-all,samples/GSE254861/GSM8059173,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8059174,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3480,Spatial transcriptomics reveals C10 tumor transcriptomic changes generated by Smarta cell transfer,GSE254861,GSE254861,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,,PBS and Smarta,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.480920773871659,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42313973,,GSM8059174,,,train,sda-all,samples/GSE254861/GSM8059174,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8066699,bone marrow,disease,acute myeloid leukemia,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),829,Spatial Transciptomics of human trephine BM samples from AML patients and healthy donors,GSE255217,GSE255217,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Trephine BM Biopsy,MONDO:0018874,luna,AML,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.9176169102112492,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38582086,,GSM8066699,,,train,sda-all,samples/GSE255217/GSM8066699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.48, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8066700,bone marrow,disease,acute myeloid leukemia,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),646,Spatial Transciptomics of human trephine BM samples from AML patients and healthy donors,GSE255217,GSE255217,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Trephine BM Biopsy,MONDO:0018874,luna,AML,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.960321809451011,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38582086,,GSM8066700,,,train,sda-all,samples/GSE255217/GSM8066700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8066701,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1305,Spatial Transciptomics of human trephine BM samples from AML patients and healthy donors,GSE255217,GSE255217,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Trephine BM Biopsy,,luna,Healthy,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.975144876190975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38582086,,GSM8066701,,,train,sda-all,samples/GSE255217/GSM8066701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8066702,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1454,Spatial Transciptomics of human trephine BM samples from AML patients and healthy donors,GSE255217,GSE255217,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Trephine BM Biopsy,,luna,Healthy,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.977192174125382,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38582086,,GSM8066702,,,train,sda-all,samples/GSE255217/GSM8066702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8070697,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1811,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:53,53,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.671428534057133,platform_constant,4.671428534057133,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070697,,,train,hesrt,samples/GSE255370/GSM8070697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070698,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1763,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:53,53,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.487499887767627,platform_constant,4.487499887767627,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070698,,,train,hesrt,samples/GSE255370/GSM8070698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8070699,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1938,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:53,53,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.530357007172927,platform_constant,4.530357007172927,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070699,,,train,hesrt,samples/GSE255370/GSM8070699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070700,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2037,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:53,53,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.116325094516879,platform_constant,4.116325094516879,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070700,,,train,hesrt,samples/GSE255370/GSM8070700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070701,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2021,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:13,13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.608928524740106,platform_constant,4.608928524740106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070701,,,train,hesrt,samples/GSE255370/GSM8070701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070702,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2034,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:13,13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.364285743962857,platform_constant,4.364285743962857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070702,,,train,hesrt,samples/GSE255370/GSM8070702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070703,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1864,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:13,13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.353571294350809,platform_constant,4.353571294350809,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070703,,,train,hesrt,samples/GSE255370/GSM8070703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070704,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2222,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:14,14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.116483245142776,platform_constant,4.116483245142776,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070704,,,train,hesrt,samples/GSE255370/GSM8070704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070705,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2102,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:14,14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.317857244067707,platform_constant,4.317857244067707,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070705,,,train,hesrt,samples/GSE255370/GSM8070705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070706,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2312,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:14,14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.065878028226892,platform_constant,4.065878028226892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070706,,,train,hesrt,samples/GSE255370/GSM8070706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070707,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2515,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Cuprizone,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:45,45,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.407142865163853,platform_constant,4.407142865163853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070707,,,train,hesrt,samples/GSE255370/GSM8070707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070708,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2269,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Cuprizone,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:45,45,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.6625002564375135,platform_constant,4.6625002564375135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070708,,,train,hesrt,samples/GSE255370/GSM8070708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070709,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2409,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Cuprizone,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:45,45,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.512500085511859,platform_constant,4.512500085511859,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070709,,,train,hesrt,samples/GSE255370/GSM8070709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8070710,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1574,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Cuprizone,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:43,43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.074603328774912,platform_constant,4.074603328774912,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070710,,,train,hesrt,samples/GSE255370/GSM8070710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070711,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1720,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Cuprizone,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:43,43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.487499887767627,platform_constant,4.487499887767627,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070711,,,train,hesrt,samples/GSE255370/GSM8070711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070712,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1670,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Cuprizone,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:43,43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.255891530784454,platform_constant,4.255891530784454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070712,,,train,hesrt,samples/GSE255370/GSM8070712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8070713,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1887,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Cuprizone,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:46,46,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.221428514861422,platform_constant,4.221428514861422,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070713,,,train,hesrt,samples/GSE255370/GSM8070713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070714,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1976,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Cuprizone,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:46,46,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.144403542087903,platform_constant,4.144403542087903,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070714,,,train,hesrt,samples/GSE255370/GSM8070714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8070715,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1813,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Cuprizone,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:46,46,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.236584587091667,platform_constant,4.236584587091667,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070715,,,train,hesrt,samples/GSE255370/GSM8070715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8070716,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2145,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Recovery,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:39,39,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.275000143554501,platform_constant,4.275000143554501,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070716,,,train,hesrt,samples/GSE255370/GSM8070716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8070717,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2329,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Recovery,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:39,39,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.442857258371432,platform_constant,4.442857258371432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070717,,,train,hesrt,samples/GSE255370/GSM8070717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070718,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2314,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Recovery,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:39,39,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.418370551369466,platform_constant,4.418370551369466,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070718,,,train,hesrt,samples/GSE255370/GSM8070718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8070719,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1881,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Recovery,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:40,40,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.319642746883963,platform_constant,4.319642746883963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070719,,,train,hesrt,samples/GSE255370/GSM8070719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8070720,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1916,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Recovery,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:40,40,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.319642746883942,platform_constant,4.319642746883942,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070720,,,train,hesrt,samples/GSE255370/GSM8070720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8070721,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1617,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Recovery,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:40,40,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.407142865163864,platform_constant,4.407142865163864,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070721,,,train,hesrt,samples/GSE255370/GSM8070721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8070722,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2436,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Recovery,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:41,41,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2558915307844565,platform_constant,4.2558915307844565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070722,,,train,hesrt,samples/GSE255370/GSM8070722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8070723,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2368,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Recovery,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:41,41,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.142857217428553,platform_constant,4.142857217428553,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070723,,,train,hesrt,samples/GSE255370/GSM8070723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8070724,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2274,Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[Spatial Transcriptomics],GSE255370,GSE255370,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Recovery,age rule: age with unit,not stated,6–8 weeks,extracted field,male,GSE255370:41,41,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.334736426463975,platform_constant,4.334736426463975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42626114,,GSM8070724,,,train,hesrt,samples/GSE255370/GSM8070724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8072115,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,130242,Single cell approaches define two mammalian oligodendrocyte precursor cell populations and their evolution over developmental time [Xenium In Situ Gene Expression],GSE255407,GSE255407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000956,Postnatal mouse brain cortex,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000020664572656,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38579710,,GSM8072115,,,train,sda-all,samples/GSE255407/GSM8072115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8072116,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,124039,Single cell approaches define two mammalian oligodendrocyte precursor cell populations and their evolution over developmental time [Xenium In Situ Gene Expression],GSE255407,GSE255407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000956,Postnatal mouse brain cortex,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000117980179329,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38579710,,GSM8072116,,,train,sda-all,samples/GSE255407/GSM8072116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8072117,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,126119,Single cell approaches define two mammalian oligodendrocyte precursor cell populations and their evolution over developmental time [Xenium In Situ Gene Expression],GSE255407,GSE255407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000956,Postnatal mouse brain cortex,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000048249241797,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38579710,,GSM8072117,,,train,sda-all,samples/GSE255407/GSM8072117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8074615,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2432,Spatial transcriptomic analysis of liver-innervating cholinergic neurons,GSE255552,GSE255552,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,"ChAT-IRES-cre+GFP, HFD (control)",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39436946,,GSM8074615,,,train,hesrt,samples/GSE255552/GSM8074615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8074616,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,834,Spatial transcriptomic analysis of liver-innervating cholinergic neurons,GSE255552,GSE255552,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,"ChAT-IRES-cre+dTA, HFD (ablation)",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39436946,,GSM8074616,,,train,hesrt,samples/GSE255552/GSM8074616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8082300,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,924093,Perinatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography [MERFISH],GSE255892,GSE255892,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole brain,MONDO:0043510,luna,,perinatal hyopxia,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8082300,,,train,sda-all,samples/GSE255892/GSM8082300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8082301,brain,disease,brain injury,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,1550129,Perinatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography [MERFISH],GSE255892,GSE255892,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole brain,MONDO:0043510,mondo_predicate (Luna: perturbation),,perinatal hyopxia,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8082301,,,train,sda-all,samples/GSE255892/GSM8082301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8082302,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,2177495,Perinatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography [MERFISH],GSE255892,GSE255892,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole brain,,luna,,perinatal normoxia,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8082302,,,train,sda-all,samples/GSE255892/GSM8082302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8082303,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,629688,Perinatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography [MERFISH],GSE255892,GSE255892,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole brain,,luna,,perinatal normoxia,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8082303,,,train,sda-all,samples/GSE255892/GSM8082303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8082304,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,1422754,Perinatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography [MERFISH],GSE255892,GSE255892,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole brain,,luna,,perinatal normoxia,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8082304,,,train,sda-all,samples/GSE255892/GSM8082304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8458769,skeletal muscle,disease,burn,tendon,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),3555,The HIF-1α/PLOD2 axis integrates extracellular matrix organization and cell metabolism leading to aberrant musculoskeletal repair.,GSE255942,GSE255942,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000043,Tendon,MONDO:0043519,mondo_predicate (Luna: perturbation),,burn/tenotomy procedure,age rule: age with unit,adult,10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.793691509347637,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38472175,,GSM8458769,,,train,sda-all,samples/GSE255942/GSM8458769,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8458770,skeletal muscle,disease,burn,tendon,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),3195,The HIF-1α/PLOD2 axis integrates extracellular matrix organization and cell metabolism leading to aberrant musculoskeletal repair.,GSE255942,GSE255942,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000043,Tendon,MONDO:0043519,mondo_predicate (Luna: perturbation),,burn/tenotomy procedure,age rule: age with unit,adult,10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.477394878902958,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,38472175,,GSM8458770,,,train,sda-all,samples/GSE255942/GSM8458770,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8083339,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,53315,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],GSE255953,GSE255953,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38427564,,GSM8083339,,,train,sda-all,samples/GSE255953/GSM8083339,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8083340,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,56458,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],GSE255953,GSE255953,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38427564,,GSM8083340,,,train,sda-all,samples/GSE255953/GSM8083340,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8083341,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,52467,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],GSE255953,GSE255953,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,38427564,,GSM8083341,,,train,sda-all,samples/GSE255953/GSM8083341,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8083342,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,55381,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],GSE255953,GSE255953,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,38427564,,GSM8083342,,,train,sda-all,samples/GSE255953/GSM8083342,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8083343,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,55610,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],GSE255953,GSE255953,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,38427564,,GSM8083343,,,train,sda-all,samples/GSE255953/GSM8083343,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8083344,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,60723,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],GSE255953,GSE255953,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,38427564,,GSM8083344,,,train,sda-all,samples/GSE255953/GSM8083344,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 0.98}",,
GSM8083345,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,50175,Transcriptomic landscape of the anterior thalamic nuclei of the mouse [Xenium],GSE255953,GSE255953,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,38427564,,GSM8083345,,,train,sda-all,samples/GSE255953/GSM8083345,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8091664,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4695,Longitudinal spatial transcriptomics of murine IL10KO colitis,GSE256234,GSE256234,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.394810740381603,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM8091664,,,train,sda-all,samples/GSE256234/GSM8091664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM8091665,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3860,Longitudinal spatial transcriptomics of murine IL10KO colitis,GSE256234,GSE256234,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0005292,luna,,Il10KO,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.516618161857579,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM8091665,,,train,sda-all,samples/GSE256234/GSM8091665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8091666,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4992,Longitudinal spatial transcriptomics of murine IL10KO colitis,GSE256234,GSE256234,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0005292,luna,,Il10KO,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.51564072073888,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM8091666,,,train,sda-all,samples/GSE256234/GSM8091666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8091667,colon,disease,rectal prolapse;colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4992,Longitudinal spatial transcriptomics of murine IL10KO colitis,GSE256234,GSE256234,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0004754;MONDO:0005292,luna,,Il10KO,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.770990611327005,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42097141,,GSM8091667,,,train,sda-all,samples/GSE256234/GSM8091667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8093729,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Nova-ST,False,,19327591,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],GSE256318,GSE256318,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,Nova-ST,,,bin,25727,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39111312,,GSM8093729,,,test,sda-all,samples/GSE256318/GSM8093729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8093730,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Nova-ST,False,,10965430,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],GSE256318,GSE256318,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,Nova-ST,,,bin,22377,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39111312,,GSM8093730,,,test,sda-all,samples/GSE256318/GSM8093730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8093731,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Nova-ST,False,,10336509,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],GSE256318,GSE256318,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,Nova-ST,,,bin,22138,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39111312,,GSM8093731,,,test,sda-all,samples/GSE256318/GSM8093731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8093732,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Nova-ST,False,,11960717,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],GSE256318,GSE256318,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,Nova-ST,,,bin,24963,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39111312,,GSM8093732,,,test,sda-all,samples/GSE256318/GSM8093732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8093733,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Nova-ST,False,,12802658,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],GSE256318,GSE256318,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,Nova-ST,,,bin,22263,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39111312,,GSM8093733,,,test,sda-all,samples/GSE256318/GSM8093733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8372199,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Nova-ST,False,,12954685,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],GSE256318,GSE256318,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,Nova-ST,,,bin,23515,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39111312,,GSM8372199,,,test,sda-all,samples/GSE256318/GSM8372199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8372200,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,Nova-ST,False,,9923921,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Nova-ST],GSE256318,GSE256318,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,Nova-ST,,,bin,22061,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39111312,,GSM8372200,,,test,sda-all,samples/GSE256318/GSM8372200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8093734,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,161510,Nova-ST: Nano-Patterned Ultra-Dense platform for spatial transcriptomics [Stereo-Seq],GSE256319,GSE256319,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,25712,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,39111312,,GSM8093734,,,val,sda-all,samples/GSE256319/GSM8093734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8097055,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1455,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,"sham, rostral 1mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9375791862171408,platform_constant,3.9375791862171408,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097055,,,train,hesrt,samples/GSE256397/GSM8097055,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097056,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1417,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,"sham, rostral 0.5mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.018055469770078,platform_constant,4.018055469770078,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097056,,,train,hesrt,samples/GSE256397/GSM8097056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097057,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1273,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,"sham, caudal 0.5mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.02824256435091,platform_constant,4.02824256435091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097057,,,train,hesrt,samples/GSE256397/GSM8097057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097058,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1440,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,,luna,,"sham, caudal 1mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.983608335793203,platform_constant,3.983608335793203,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097058,,,train,hesrt,samples/GSE256397/GSM8097058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097059,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1474,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,mondo_predicate (Luna: perturbation),,"3h post-transection, rostral 1mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.947342988432303,platform_constant,3.947342988432303,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097059,,,train,hesrt,samples/GSE256397/GSM8097059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097060,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1691,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,luna,,"3h post-transection, rostral 0.5mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.96666656496135,platform_constant,3.96666656496135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097060,,,train,hesrt,samples/GSE256397/GSM8097060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8097061,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1558,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,mondo_predicate (Luna: perturbation),,"3h post-transection, caudal 0.5mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9527778828821396,platform_constant,3.9527778828821396,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097061,,,train,hesrt,samples/GSE256397/GSM8097061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097062,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1488,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,mondo_predicate (Luna: perturbation),,"3h post-transection, caudal 1mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9989513134512764,platform_constant,3.9989513134512764,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097062,,,train,hesrt,samples/GSE256397/GSM8097062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097063,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1433,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,luna,,"24h post-transection, rostral 1mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9529223900005603,platform_constant,3.9529223900005603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097063,,,train,hesrt,samples/GSE256397/GSM8097063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097064,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1401,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,luna,,"24h post-transection, rostral 0.5mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.948611319202931,platform_constant,3.948611319202931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097064,,,train,hesrt,samples/GSE256397/GSM8097064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8097065,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1500,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,luna,,"24h post-transection, caudal 0.5mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9626861400242723,platform_constant,3.9626861400242723,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097065,,,train,hesrt,samples/GSE256397/GSM8097065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8097066,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1610,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,luna,,"24h post-transection, caudal 1mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9529223900005603,platform_constant,3.9529223900005603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097066,,,train,hesrt,samples/GSE256397/GSM8097066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097067,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1264,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,luna,,"72h post-transection, rostral 1mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.940369000453341,platform_constant,3.940369000453341,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097067,,,train,hesrt,samples/GSE256397/GSM8097067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8097068,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1080,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,mondo_predicate (Luna: perturbation),,"72h post-transection, rostral 0.5mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.957106722033494,platform_constant,3.957106722033494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097068,,,train,hesrt,samples/GSE256397/GSM8097068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097069,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1304,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,spinal cord,MONDO:0043797,luna,,"72h post-transection, caudal 0.5mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,13.194444180555585,platform_constant,13.194444180555585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097069,,,train,hesrt,samples/GSE256397/GSM8097069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8097070,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1400,A spatiotemporal molecular atlas of mouse spinal cord injury identifies a distinct astrocyte subpopulation and therapeutic potential of IGFBP2,GSE256397,GSE256397,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,luna,,"72h post-transection, caudal 1mm",age rule: age with unit,not stated,8–9 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9529223900005603,platform_constant,3.9529223900005603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39029468,10.1016/j.devcel.2024.06.016,GSM8097070,,,train,hesrt,samples/GSE256397/GSM8097070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115762,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,False,,1290,Sex differences in Non-Alcoholic Steatohepatitis (NASH) in mice evoked by a fructose-palmitate-cholesterol (FPC)-enriched diet,GSE256505,GSE256505,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,,NASH,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39911943,,GSM8115762,,,train,sda-all,samples/GSE256505/GSM8115762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115763,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,False,,1613,Sex differences in Non-Alcoholic Steatohepatitis (NASH) in mice evoked by a fructose-palmitate-cholesterol (FPC)-enriched diet,GSE256505,GSE256505,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,,NASH,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39911943,,GSM8115763,,,train,sda-all,samples/GSE256505/GSM8115763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8110784,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2650,Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [spatial transcriptomics data],GSE258959,GSE258959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,hyperuricemia,Uox_KO,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.494422557947547,platform_constant,5.494422557947547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39817712,,GSM8110784,,,train,hesrt,samples/GSE258959/GSM8110784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8110785,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2590,Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [spatial transcriptomics data],GSE258959,GSE258959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,hyperuricemia,Uox_KO,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.128137697515024,platform_constant,5.128137697515024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39817712,,GSM8110785,,,train,hesrt,samples/GSE258959/GSM8110785,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8110786,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2528,Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [spatial transcriptomics data],GSE258959,GSE258959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,Control,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.2909312324094655,platform_constant,5.2909312324094655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39817712,,GSM8110786,,,train,hesrt,samples/GSE258959/GSM8110786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8110787,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3362,Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [spatial transcriptomics data],GSE258959,GSE258959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,Control,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.029445585230719,platform_constant,5.029445585230719,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39817712,,GSM8110787,,,train,hesrt,samples/GSE258959/GSM8110787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8114827,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3064,Glycolysis in hepatic stellate cells coordinates fibrogenic extracellular vesicle release in a spatial manner to amplify liver fibrosis,GSE259363,GSE259363,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,olive oil treatment; genotype HK2fl/fl; healthy control,age rule: age with unit,adult,5 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.457520343298791,platform_constant,4.457520343298791,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8114827,,,train,hesrt,samples/GSE259363/GSM8114827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8114828,liver,disease,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,4134,Glycolysis in hepatic stellate cells coordinates fibrogenic extracellular vesicle release in a spatial manner to amplify liver fibrosis,GSE259363,GSE259363,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,CCl4 treatment; genotype HK2fl/fl; fibrotic,age rule: age with unit,adult,5 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.211798810071486,platform_constant,4.211798810071486,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8114828,,,train,hesrt,samples/GSE259363/GSM8114828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8114829,liver,disease,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3865,Glycolysis in hepatic stellate cells coordinates fibrogenic extracellular vesicle release in a spatial manner to amplify liver fibrosis,GSE259363,GSE259363,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,CCl4 treatment; genotype PDGFRBcreERT2/Hk2fl/fl; HSC-specific HK2 deletion with CCl4,age rule: age with unit,adult,5 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.503693346854832,platform_constant,4.503693346854832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8114829,,,train,hesrt,samples/GSE259363/GSM8114829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8114830,liver,disease,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2577,Glycolysis in hepatic stellate cells coordinates fibrogenic extracellular vesicle release in a spatial manner to amplify liver fibrosis,GSE259363,GSE259363,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,CCl4 treatment; genotype HK2fl/fl; fibrotic,age rule: age with unit,adult,5 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.227055943155614,platform_constant,4.227055943155614,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8114830,,,train,hesrt,samples/GSE259363/GSM8114830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115651,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2153,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sham,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.150829984868192,platform_constant,4.150829984868192,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115651,,,train,hesrt,samples/GSE259405/GSM8115651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8115652,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2068,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sham,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.139420464867858,platform_constant,4.139420464867858,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115652,,,train,hesrt,samples/GSE259405/GSM8115652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8115653,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2053,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sham,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.612678580134204,platform_constant,4.612678580134204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115653,,,train,hesrt,samples/GSE259405/GSM8115653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8115654,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2413,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sham,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.613283942366312,platform_constant,4.613283942366312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115654,,,train,hesrt,samples/GSE259405/GSM8115654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8115655,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2104,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,iTBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.05899416943699,platform_constant,4.05899416943699,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115655,,,train,hesrt,samples/GSE259405/GSM8115655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8115656,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2266,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,iTBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.154273993134488,platform_constant,4.154273993134488,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115656,,,train,hesrt,samples/GSE259405/GSM8115656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115657,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2297,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,iTBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.623004676845766,platform_constant,4.623004676845766,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115657,,,train,hesrt,samples/GSE259405/GSM8115657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8115658,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2159,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,iTBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.613283942366312,platform_constant,4.613283942366312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115658,,,train,hesrt,samples/GSE259405/GSM8115658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115659,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2166,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,cTBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.617994768370472,platform_constant,4.617994768370472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115659,,,train,hesrt,samples/GSE259405/GSM8115659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8115660,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2478,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,cTBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.618719460521873,platform_constant,4.618719460521873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115660,,,train,hesrt,samples/GSE259405/GSM8115660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8115661,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2648,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,cTBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.619081891897559,platform_constant,4.619081891897559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115661,,,train,hesrt,samples/GSE259405/GSM8115661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8115662,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2733,"Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]",GSE259405,GSE259405,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,cTBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.618719460521873,platform_constant,4.618719460521873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39772671,,GSM8115662,,,train,hesrt,samples/GSE259405/GSM8115662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054415,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,71227,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,4,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999810996563574,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054415,,,val,sda-all,samples/GSE260452/GSM9054415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054416,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,223613,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,6,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998392725936813,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054416,,,val,sda-all,samples/GSE260452/GSM9054416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054417,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,136005,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,6,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000167785234899,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054417,,,val,sda-all,samples/GSE260452/GSM9054417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054418,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,150258,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,6,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998709477596526,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054418,,,val,sda-all,samples/GSE260452/GSM9054418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054419,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,84565,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,3,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000245249896736,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054419,,,val,sda-all,samples/GSE260452/GSM9054419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9054420,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,66638,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,3,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997938994229185,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054420,,,val,sda-all,samples/GSE260452/GSM9054420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.92}",,
GSM9054421,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,male,Xenium,Xenium,True,fluorescence: DAPI,105149,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,luna,neonatal or infant,<1,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999044159816475,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054421,,,val,sda-all,samples/GSE260452/GSM9054421,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054422,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,male,Xenium,Xenium,True,fluorescence: DAPI,122683,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,luna,neonatal or infant,<1,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000039826674313,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054422,,,val,sda-all,samples/GSE260452/GSM9054422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054423,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,male,Xenium,Xenium,True,fluorescence: DAPI,144901,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,luna,neonatal or infant,<1,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500000739863865,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054423,,,val,sda-all,samples/GSE260452/GSM9054423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9054424,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,401858,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,13,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000058284115636,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054424,,,val,sda-all,samples/GSE260452/GSM9054424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054425,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,103335,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,8,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103334251861,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054425,,,val,sda-all,samples/GSE260452/GSM9054425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054426,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,97780,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,8,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000245249896736,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054426,,,val,sda-all,samples/GSE260452/GSM9054426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054428,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,female,Xenium,Xenium,True,fluorescence: DAPI,180332,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,luna,neonatal or infant,<1,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997641509433954,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054428,,,val,sda-all,samples/GSE260452/GSM9054428,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9054429,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,female,Xenium,Xenium,True,fluorescence: DAPI,160499,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,luna,neonatal or infant,<1,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500017686593562,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054429,,,val,sda-all,samples/GSE260452/GSM9054429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054430,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,female,Xenium,Xenium,True,fluorescence: DAPI,160738,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,luna,neonatal or infant,<1,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000265330188679,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054430,,,val,sda-all,samples/GSE260452/GSM9054430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9054431,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,147881,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,6,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000029491565412,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054431,,,val,sda-all,samples/GSE260452/GSM9054431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054432,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,147265,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,6,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999140775364304,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054432,,,val,sda-all,samples/GSE260452/GSM9054432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054433,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,93702,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,3,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000186196623635,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054433,,,val,sda-all,samples/GSE260452/GSM9054433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.97}",,
GSM9054434,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,male,Xenium,Xenium,True,fluorescence: DAPI,104023,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,luna,neonatal or infant,<1,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999830788899752,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054434,,,val,sda-all,samples/GSE260452/GSM9054434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054435,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,132602,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,7,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000137892995036,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054435,,,val,sda-all,samples/GSE260452/GSM9054435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054436,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,61129,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,2,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000206213912566,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054436,,,val,sda-all,samples/GSE260452/GSM9054436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9054437,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,56479,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,2,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999140775364304,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054437,,,val,sda-all,samples/GSE260452/GSM9054437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM9054438,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,166042,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,adult,19,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999793268833204,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054438,,,val,sda-all,samples/GSE260452/GSM9054438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054439,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,164677,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,adult,19,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998553121124434,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054439,,,val,sda-all,samples/GSE260452/GSM9054439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054440,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,male,Xenium,Xenium,True,fluorescence: DAPI,37655,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,luna,neonatal or infant,,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000513347022587,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054440,,,val,sda-all,samples/GSE260452/GSM9054440,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.72}",,
GSM9054441,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,male,Xenium,Xenium,True,fluorescence: DAPI,37144,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,luna,neonatal or infant,,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000082318077049,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054441,,,val,sda-all,samples/GSE260452/GSM9054441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.74}",,
GSM9054442,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,neonatal or infant,male,Xenium,Xenium,True,fluorescence: DAPI,41761,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,luna,neonatal or infant,,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999230137548756,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054442,,,val,sda-all,samples/GSE260452/GSM9054442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM9054443,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,51207,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,3,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999609053497942,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054443,,,val,sda-all,samples/GSE260452/GSM9054443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054444,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,105323,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,10,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000229610580456,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054444,,,val,sda-all,samples/GSE260452/GSM9054444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054445,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,57730,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,8,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000017186855493,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054445,,,val,sda-all,samples/GSE260452/GSM9054445,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054446,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,67235,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,3,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999837892006602,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054446,,,val,sda-all,samples/GSE260452/GSM9054446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.93}",,
GSM9054447,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,83329,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,17,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000117980179329,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054447,,,val,sda-all,samples/GSE260452/GSM9054447,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.98}",,
GSM9054448,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,52068,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,8,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000017186855493,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054448,,,val,sda-all,samples/GSE260452/GSM9054448,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054449,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,109123,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,10,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000150409866887,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054449,,,val,sda-all,samples/GSE260452/GSM9054449,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054450,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,60116,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,8,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000309363398872,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,stitching artefacts (expression),41813893,,GSM9054450,,,val,sda-all,samples/GSE260452/GSM9054450,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054451,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,54367,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,3,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000082318077049,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054451,,,val,sda-all,samples/GSE260452/GSM9054451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054452,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,67934,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,17,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000137570504883,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054452,,,val,sda-all,samples/GSE260452/GSM9054452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054453,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,54212,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,3,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999263058601584,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054453,,,val,sda-all,samples/GSE260452/GSM9054453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054454,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,67897,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,17,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000117980179329,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054454,,,val,sda-all,samples/GSE260452/GSM9054454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054455,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,75274,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,17,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999140775364304,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054455,,,val,sda-all,samples/GSE260452/GSM9054455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9054456,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,104122,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,10,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054456,,,val,sda-all,samples/GSE260452/GSM9054456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054457,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,107594,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,5,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000183772856749,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054457,,,val,sda-all,samples/GSE260452/GSM9054457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054458,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,67027,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,9,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896694214877,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054458,,,val,sda-all,samples/GSE260452/GSM9054458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054459,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,324636,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,11,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054459,,,val,sda-all,samples/GSE260452/GSM9054459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9054460,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,80938,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,5,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000017186855493,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054460,,,val,sda-all,samples/GSE260452/GSM9054460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054461,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,40976,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,11,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999609053497942,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054461,,,val,sda-all,samples/GSE260452/GSM9054461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054462,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,73817,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,9,extracted field,M,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499979353773098,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054462,,,val,sda-all,samples/GSE260452/GSM9054462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054463,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,343803,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,11,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000067063356581,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054463,,,val,sda-all,samples/GSE260452/GSM9054463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054464,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,37767,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,11,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054464,,,val,sda-all,samples/GSE260452/GSM9054464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054465,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,77223,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,6,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000029491565412,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054465,,,val,sda-all,samples/GSE260452/GSM9054465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054466,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,61946,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,8,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000206213912566,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054466,,,val,sda-all,samples/GSE260452/GSM9054466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054467,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,43147,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,6,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999512119967132,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054467,,,val,sda-all,samples/GSE260452/GSM9054467,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054468,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,68740,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,8,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000117980179329,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054468,,,val,sda-all,samples/GSE260452/GSM9054468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054469,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,45275,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,6,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999512119967132,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054469,,,val,sda-all,samples/GSE260452/GSM9054469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054470,brain,disease,supratentorial ependymoma;ependymoma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,64052,Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas,GSE260452,GSE260452+GSE300146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0850340;MONDO:0016698,luna,,,age rule: bare number read as years,juvenile,6,extracted field,F,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999867272298254,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41813893,,GSM9054470,,,val,sda-all,samples/GSE260452/GSM9054470,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8124394,lung,perturbation,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,75179,Spatial transcriptomic sequencing of repaired lung transplanted with human P63+ progenitor [STOmics-seq],GSE260779,GSE260779,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,78647,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,39900892,,GSM8124394,,,test,sda-all,samples/GSE260779/GSM8124394,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8124718,colon,disease,colorectal cancer,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,35123,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,GSE260801,GSE260797+GSE260801,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,Colorectal pre-malignant lesion,MONDO:0005575,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",luna,not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,17160,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124718,,,test,sda-all,samples/GSE260801/GSM8124718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8124719,colon,disease,colorectal cancer,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,35277,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,GSE260801,GSE260797+GSE260801,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,Colorectal pre-malignant lesion,MONDO:0005575,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",luna,not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,17160,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124719,,,test,sda-all,samples/GSE260801/GSM8124719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8124720,colon,disease,colorectal cancer,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,26564,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,GSE260801,GSE260797+GSE260801,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,Colorectal pre-malignant lesion,MONDO:0005575,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",luna,not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,17160,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124720,,,test,sda-all,samples/GSE260801/GSM8124720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.68, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8124721,colon,disease,colorectal cancer,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,35311,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,GSE260801,GSE260797+GSE260801,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,Colorectal pre-malignant lesion,MONDO:0005575,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",luna,not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,17160,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124721,,,test,sda-all,samples/GSE260801/GSM8124721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8124722,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,34781,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,GSE260801,GSE260797+GSE260801,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,normal colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,17160,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124722,,,test,sda-all,samples/GSE260801/GSM8124722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8124723,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,33673,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,GSE260801,GSE260797+GSE260801,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,normal colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,17160,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124723,,,test,sda-all,samples/GSE260801/GSM8124723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8124724,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,43109,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,GSE260801,GSE260797+GSE260801,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,normal colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,17160,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124724,,,test,sda-all,samples/GSE260801/GSM8124724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8124725,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,42394,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,GSE260801,GSE260797+GSE260801,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,normal colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,17160,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124725,,,test,sda-all,samples/GSE260801/GSM8124725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8124726,colon,disease,colorectal cancer,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,51162,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,GSE260801,GSE260797+GSE260801,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,Colorectal pre-malignant lesion,MONDO:0005575,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",luna,not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,17160,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124726,,,test,sda-all,samples/GSE260801/GSM8124726,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.56, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8124727,colon,disease,colorectal cancer,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,48034,Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics,GSE260801,GSE260797+GSE260801,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,Colorectal pre-malignant lesion,MONDO:0005575,luna,,"injection with 4-hydroxytamoxifen to the submucosal layer of the colon, monitoring for 3 weeks",luna,not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,17160,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40667258;41384492,,GSM8124727,,,test,sda-all,samples/GSE260801/GSM8124727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8125592,brain,normal,,brainstem,primary tissue,Rattus norvegicus,Norway rat,adult,male,Visium,Visium,True,H&E,1792,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],GSE260847,GSE260847,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002298,Brainstem,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25340,counts,pixel,4.167749934337109,platform_constant,4.167749934337109,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125592,,,train,hesrt,samples/GSE260847/GSM8125592,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8125593,brain,normal,,brainstem,primary tissue,Rattus norvegicus,Norway rat,adult,male,Visium,Visium,True,H&E,1984,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],GSE260847,GSE260847,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002298,Brainstem,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25340,counts,pixel,4.052210356538153,platform_constant,4.052210356538153,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125593,,,train,hesrt,samples/GSE260847/GSM8125593,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8125594,brain,normal,,brainstem,primary tissue,Rattus norvegicus,Norway rat,adult,male,Visium,Visium,True,H&E,1723,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],GSE260847,GSE260847,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002298,Brainstem,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25340,counts,pixel,4.0457499881864045,platform_constant,4.0457499881864045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125594,,,train,hesrt,samples/GSE260847/GSM8125594,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8125595,brain,normal,,brainstem,primary tissue,Rattus norvegicus,Norway rat,adult,male,Visium,Visium,True,H&E,2084,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],GSE260847,GSE260847,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002298,Brainstem,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25340,counts,pixel,4.168000079358731,platform_constant,4.168000079358731,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125595,,,train,hesrt,samples/GSE260847/GSM8125595,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8125596,brain,normal,,brainstem,primary tissue,Rattus norvegicus,Norway rat,adult,male,Visium,Visium,True,H&E,2182,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],GSE260847,GSE260847,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002298,Brainstem,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25340,counts,pixel,4.20245948334639,platform_constant,4.20245948334639,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125596,,,train,hesrt,samples/GSE260847/GSM8125596,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8125597,brain,normal,,brainstem,primary tissue,Rattus norvegicus,Norway rat,adult,male,Visium,Visium,True,H&E,2132,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],GSE260847,GSE260847,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002298,Brainstem,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25340,counts,pixel,4.09013169578027,platform_constant,4.09013169578027,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125597,,,train,hesrt,samples/GSE260847/GSM8125597,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8125598,brain,normal,,brainstem,primary tissue,Rattus norvegicus,Norway rat,adult,male,Visium,Visium,True,H&E,2291,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],GSE260847,GSE260847,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002298,Brainstem,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25340,counts,pixel,4.147990002925978,platform_constant,4.147990002925978,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125598,,,train,hesrt,samples/GSE260847/GSM8125598,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8125599,brain,normal,,brainstem,primary tissue,Rattus norvegicus,Norway rat,adult,male,Visium,Visium,True,H&E,2199,Neuromodulatory co-expression in cardiac vagal motor neurons of the Dorsal Motor Nucleus of the Vagus [spatial transcriptomics],GSE260847,GSE260847,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002298,Brainstem,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25340,counts,pixel,4.357999932538152,platform_constant,4.357999932538152,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39171288,,GSM8125599,,,train,hesrt,samples/GSE260847/GSM8125599,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8993724,bone,normal,,knee,primary tissue,Homo sapiens,human,fetal,unknown,Visium HD,Visium HD,True,other bright-field stain (heuristic),88814,scMultiome-seq and single-cell spatial HD data for the developing human knee,GSE260926,GSE260926,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001465,knee,,luna,,,luna,fetal,E67,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.5602449029106054,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41520766,,GSM8993724,,,train,sda-all,samples/GSE260926/GSM8993724,sda-tissue-disease-2.3,"{""organ"": 0.44, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 0.58}",organ;life_stage,low_confidence_annotation
GSM8131850,lymph node,perturbation,,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,706,Germinal Center Dark Zone harbors ATR-dependent determinants of T-cell exclusion that are also identified in aggressive lymphoma – Visium_FFPE_Spatial_Trasciptomics_project,GSE260998,GSE260998,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,mesenteric lymph node,,luna,,B6.129P2-Aicda tm1(cre)Mnz/J,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,4.009137142675485,platform_constant,4.009137142675485,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38562878;40674145,,GSM8131850,,,train,hesrt,samples/GSE260998/GSM8131850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8131851,lymph node,perturbation,,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1272,Germinal Center Dark Zone harbors ATR-dependent determinants of T-cell exclusion that are also identified in aggressive lymphoma – Visium_FFPE_Spatial_Trasciptomics_project,GSE260998,GSE260998,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,mesenteric lymph node,,luna,,B6N;129-Ilk tm1Star/J,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,3.9824122275628153,platform_constant,3.9824122275628153,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38562878;40674145,,GSM8131851,,,train,hesrt,samples/GSE260998/GSM8131851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8134145,other,normal,,corpus cavernosum,primary tissue,Homo sapiens,human,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,2292759,Spatial transcriptome sequencing of the human corpus cavernosum with normal erectile function,GSE261085,GSE261085,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006609,corpus cavernosum,,luna,,,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,58735,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,zero_count_observations,VERIFIED,,,,39299236,,GSM8134145,,,train,sda-all,samples/GSE261085/GSM8134145,sda-tissue-disease-2.3,"{""organ"": 0.38, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8145250,other,normal,,corpus cavernosum,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,BMK S1000,BMKMANU S1000,True,H&E,2823,Spatial transcriptome sequencing of the rat corpus cavernosum with normal erectile function,GSE261487,GSE261487,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0006609,corpus cavernosum,,luna,,normal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,BMKMANU S1000,,,,32883,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39299236,,GSM8145250,,,train,hesrt,samples/GSE261487/GSM8145250,sda-tissue-disease-2.4,"{""organ"": 0.84, ""sample_kind"": 0.8300000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8146484,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,2802,Histopathological-based analysis of human kidney spatial transcriptomics data: toward precision pathology,GSE261545,GSE261545,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005016;MONDO:0005015,luna,diabetic nephropathy,chronic kidney disease,age rule: age in years,not stated,33 years,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.812409077079983,platform_constant,4.812409077079983,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39097165,,GSM8146484,,,train,hesrt,samples/GSE261545/GSM8146484,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8153336,kidney,disease,chronic kidney disease,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2709,NAD+ prevents chronic kidney disease by activating renal tubular metabolism - spatial transcriptomics,GSE261872,GSE261872,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0005300,luna,,Col4a3+/- Vehicle,age rule: age with unit,adult,25 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.3787851613880087,platform_constant,0.49999158312893416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40059824,,GSM8153336,,,train,hesrt,samples/GSE261872/GSM8153336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8153337,kidney,disease,chronic kidney disease,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1921,NAD+ prevents chronic kidney disease by activating renal tubular metabolism - spatial transcriptomics,GSE261872,GSE261872,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0005300,luna,,Col4a3+/- Nicotinamide riboside,age rule: age with unit,adult,25 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.3787851613880087,platform_constant,0.500008967578919,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40059824,,GSM8153337,,,train,hesrt,samples/GSE261872/GSM8153337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8153338,kidney,disease,chronic kidney disease,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1474,NAD+ prevents chronic kidney disease by activating renal tubular metabolism - spatial transcriptomics,GSE261872,GSE261872,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0005300,luna,Alport syndrome,Col4a3-/- Vehicle,age rule: age with unit,adult,25 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.3787851613880087,platform_constant,0.500008967578919,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40059824,,GSM8153338,,,train,hesrt,samples/GSE261872/GSM8153338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8153339,kidney,disease,chronic kidney disease,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2644,NAD+ prevents chronic kidney disease by activating renal tubular metabolism - spatial transcriptomics,GSE261872,GSE261872,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0005300,luna,Alport syndrome,Col4a3-/- Nicotinamide riboside,age rule: age with unit,adult,25 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.3787851613880087,platform_constant,0.499993516198358,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40059824,,GSM8153339,,,train,hesrt,samples/GSE261872/GSM8153339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8153570,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,195289,Cancer cell self-built physical barriers promote acquired resistance to immunotherapy [spatial],GSE261890,GSE261890,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,NSCLC,MONDO:0005233,luna,,"immunotherapy-sensitive+veh, immunotherapy-resistant+veh",luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,bin,28001,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8153570,,,train,sda-all,samples/GSE261890/GSM8153570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8153571,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,195868,Cancer cell self-built physical barriers promote acquired resistance to immunotherapy [spatial],GSE261890,GSE261890,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,NSCLC,MONDO:0005233,luna,,"immunotherapy-sensitive+anti-PD1, immunotherapy-resistant+anti-PD1",luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,bin,28001,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8153571,,,train,sda-all,samples/GSE261890/GSM8153571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8155169,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4046,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.015000040149996,platform_constant,4.015000040149996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155169,,,train,hesrt,samples/GSE261958/GSM8155169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155170,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2897,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.133333399466673,platform_constant,4.133333399466673,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155170,,,train,hesrt,samples/GSE261958/GSM8155170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155171,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3784,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.196666537409335,platform_constant,4.196666537409335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155171,,,train,hesrt,samples/GSE261958/GSM8155171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155172,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4123,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.054166584569796,platform_constant,4.054166584569796,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155172,,,train,hesrt,samples/GSE261958/GSM8155172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155173,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4644,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.233054180692269,platform_constant,4.233054180692269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155173,,,train,hesrt,samples/GSE261958/GSM8155173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8155174,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3679,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.355162874581166,platform_constant,4.355162874581166,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155174,,,train,hesrt,samples/GSE261958/GSM8155174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155175,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3333,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.1522552882411885,platform_constant,4.1522552882411885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155175,,,train,hesrt,samples/GSE261958/GSM8155175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8155176,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4372,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.420621160285734,platform_constant,4.420621160285734,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155176,,,train,hesrt,samples/GSE261958/GSM8155176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8155177,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3726,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.149235570952363,platform_constant,4.149235570952363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155177,,,train,hesrt,samples/GSE261958/GSM8155177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8155178,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4049,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.068364966377711,platform_constant,4.068364966377711,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8155178,,,train,hesrt,samples/GSE261958/GSM8155178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657777,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,331,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657777,,,train,hesrt,samples/GSE261958/GSM8657777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657778,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,4439,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657778,,,train,hesrt,samples/GSE261958/GSM8657778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8657779,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,4845,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657779,,,train,hesrt,samples/GSE261958/GSM8657779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657780,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,4816,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657780,,,train,hesrt,samples/GSE261958/GSM8657780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657781,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,4192,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657781,,,train,hesrt,samples/GSE261958/GSM8657781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8657782,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,4661,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657782,,,train,hesrt,samples/GSE261958/GSM8657782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657783,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,4983,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657783,,,train,hesrt,samples/GSE261958/GSM8657783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657784,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,4694,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657784,,,train,hesrt,samples/GSE261958/GSM8657784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8657785,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,4938,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657785,,,train,hesrt,samples/GSE261958/GSM8657785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8657786,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,4563,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657786,,,train,hesrt,samples/GSE261958/GSM8657786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8657787,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,337,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657787,,,train,hesrt,samples/GSE261958/GSM8657787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8657788,liver,disease,hepatoblastoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,462,Multiomic analysis uncovers a continuous spectrum of differentiation and Wnt-MDK-driven immune evasion in hepatoblastoma [Spatial Transcriptomics],GSE261958,GSE261958+GSE283207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Formalin-fixed paraffin-embedded hepatoblastoma,MONDO:0018666,luna,hepatoblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,18085,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39900120,,GSM8657788,,,train,hesrt,samples/GSE261958/GSM8657788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8157269,brain,normal,,cerebral cortex,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1162,Molecular lineage and spatial distribution of subplate neurons in the human fetal cerebral cortex.,GSE262082,GSE262082,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000956,cerebral cortex of fetal brain,,luna,,,luna,fetal,gestational week 12 and 13,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,58735,counts,pixel,4.346336949619924,platform_constant,4.346336949619924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39495628,,GSM8157269,,,train,hesrt,samples/GSE262082/GSM8157269,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8157272,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,unknown,MERFISH/MERSCOPE,MERFISH,False,,75494,Young and Aged Striatal Astrocyte MERFISH Panel,GSE262083,GSE262083,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Bilateral Striatal Slice,,luna,,Aged,luna,aged,18mo.,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,383,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41006292,,GSM8157272,,,val,sda-all,samples/GSE262083/GSM8157272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8157273,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,unknown,MERFISH/MERSCOPE,MERFISH,False,,82713,Young and Aged Striatal Astrocyte MERFISH Panel,GSE262083,GSE262083,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Bilateral Striatal Slice,,luna,,Aged,luna,aged,18mo.,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,383,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41006292,,GSM8157273,,,val,sda-all,samples/GSE262083/GSM8157273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8158989,liver,disease,cholangiocarcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,37234,Treatment of cholangiocarcinoma using humanized monoclonal antibodies targeting Claudin-1 (CCA patient tissues),GSE262162,GSE262162+GSE262166,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,,MONDO:0019087,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,970,counts,pixel,,unresolved,,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42234772,,GSM8158989,,,test,sda-all,samples/GSE262162/GSM8158989,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8158990,liver,disease,cholangiocarcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,42587,Treatment of cholangiocarcinoma using humanized monoclonal antibodies targeting Claudin-1 (CCA patient tissues),GSE262162,GSE262162+GSE262166,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,,MONDO:0019087,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,970,counts,pixel,,unresolved,,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42234772,,GSM8158990,,,test,sda-all,samples/GSE262162/GSM8158990,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.64, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8161011,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1406,NEST: Spatially-mapped cell-cell communication patterns using a deep learning-based attention mechanism,GSE262245,GSE262245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary resected tumor from pancreatic ductal adenocarcinoma stage II B,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,pancreatic ductal adenocarcinoma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.429489157471357,platform_constant,4.429489157471357,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40481363,,GSM8161011,,,train,hesrt,samples/GSE262245/GSM8161011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8161012,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2298,NEST: Spatially-mapped cell-cell communication patterns using a deep learning-based attention mechanism,GSE262245,GSE262245,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary resected tumor from pancreatic ductal adenocarcinoma stage II B,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,pancreatic ductal adenocarcinoma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.157591222258848,platform_constant,4.157591222258848,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40481363,,GSM8161012,,,train,hesrt,samples/GSE262245/GSM8161012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8162516,prostate,disease,prostate carcinoma;adenocarcinoma,prostate gland,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,4763,Spatial transcriptomics of intraductal carcinoma of the prostate (IDCP),GSE262276,GSE262276,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,prostatic cancer,MONDO:0005159;MONDO:0004970,luna,"Adenocarcinoma pT2bN0M0, Gleason Score 4+5 with IDCP",,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,9.09988798586886,platform_constant,9.09988798586886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38732035,,GSM8162516,,,train,hesrt,samples/GSE262276/GSM8162516,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8163337,brain,normal,,telencephalon,primary tissue,Gallus gallus,chicken,not stated,unknown,Stereo-seq,Stereo-seq,False,,109949,Deep learning of enhancer codes highlights similarities between mammalian and avian telencephalon cell types [stereoseq],GSE262322,GSE262322,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,luna,UBERON:0001893,Telencephalon,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,25237,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,39946451,,GSM8163337,,,train,sda-all,samples/GSE262322/GSM8163337,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8169577,heart,disease,myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3548,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,GSE262430,GSE262430,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0005068,mondo_predicate (Luna: perturbation),IR surgery,Intramyocardial injection of saline,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.0384615061538405,platform_constant,4.0384615061538405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169577,,,val,hesrt,samples/GSE262430/GSM8169577,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8169578,heart,disease,myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,4488,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,GSE262430,GSE262430,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0005068,mondo_predicate (Luna: perturbation),IR surgery,Intramyocardial injection of saline,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,5.142222168889641,platform_constant,5.142222168889641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169578,,,val,hesrt,samples/GSE262430/GSM8169578,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8169579,heart,disease,myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3923,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,GSE262430,GSE262430,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0005068,mondo_predicate (Luna: perturbation),IR surgery,intramyocardial injection of ECM hydrogel,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,5.035267291420124,platform_constant,5.035267291420124,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169579,,,val,hesrt,samples/GSE262430/GSM8169579,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8169580,heart,disease,myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3735,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,GSE262430,GSE262430,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,IR surgery,intramyocardial injection of ECM hydrogel,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.036206387194961,platform_constant,4.036206387194961,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169580,,,val,hesrt,samples/GSE262430/GSM8169580,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8169581,heart,disease,myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,4101,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,GSE262430,GSE262430,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0005068,mondo_predicate (Luna: perturbation),IR surgery,Intramyocardial injection of saline,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.132400209967662,platform_constant,4.132400209967662,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169581,,,val,hesrt,samples/GSE262430/GSM8169581,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8169582,heart,disease,myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,4065,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,GSE262430,GSE262430,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0005068,mondo_predicate (Luna: perturbation),IR surgery,Intramyocardial injection of saline,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.088943626421445,platform_constant,4.088943626421445,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169582,,,val,hesrt,samples/GSE262430/GSM8169582,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8169583,heart,disease,myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3072,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,GSE262430,GSE262430,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0005068,mondo_predicate (Luna: perturbation),IR surgery,intramyocardial injection of ECM hydrogel,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.15433583677824,platform_constant,4.15433583677824,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169583,,,val,hesrt,samples/GSE262430/GSM8169583,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8169584,heart,disease,myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,3929,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,GSE262430,GSE262430,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,IR surgery,intramyocardial injection of ECM hydrogel,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.25597190699202,platform_constant,4.25597190699202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169584,,,val,hesrt,samples/GSE262430/GSM8169584,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8169585,heart,disease,myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,female,Visium,Visium,True,H&E,2593,Regional and Cell Specific Bioactivity of Injectable ECM Biomaterials in MI through Spatial and Single Nucleus Transcriptomics,GSE262430,GSE262430,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,IR surgery,intramyocardial injection of ECM hydrogel,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.203448146269752,platform_constant,4.203448146269752,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41285846,,GSM8169585,,,val,hesrt,samples/GSE262430/GSM8169585,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8171818,heart,normal,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,1769,Smooth muscle-derived resident vascular adventitial progenitor cell contribution to cardiac fibrosis and inflammation is dependent on KLF4 [Spatial Transcriptomics],GSE262569,GSE262569,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Saline 4-Week,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32574,counts,um,1.0,verified,3.9651846736715086,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the fluorescence should be stated,,,GSM8171818,,,train,sda-all,samples/GSE262569/GSM8171818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8171819,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2622,Smooth muscle-derived resident vascular adventitial progenitor cell contribution to cardiac fibrosis and inflammation is dependent on KLF4 [Spatial Transcriptomics],GSE262569,GSE262569,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,AngII 4-Week,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32574,counts,um,1.0,verified,3.9928171725595636,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the fluorescence should be stated,,,GSM8171819,,,train,sda-all,samples/GSE262569/GSM8171819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8182904,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),660,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis,GSE262998,GSE262998,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Sarcoid Lung,MONDO:0001708,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.88927179530109,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8182904,,,train,sda-all,samples/GSE262998/GSM8182904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8182905,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1859,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis,GSE262998,GSE262998,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Sarcoid Lung,MONDO:0001708,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.8843875524453697,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8182905,,,train,sda-all,samples/GSE262998/GSM8182905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8182906,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1051,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis,GSE262998,GSE262998,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Sarcoid Lung,MONDO:0001708,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.890638332560795,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8182906,,,train,sda-all,samples/GSE262998/GSM8182906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8182907,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1642,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis,GSE262998,GSE262998,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Healthy Lung,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.902021087768381,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8182907,,,train,sda-all,samples/GSE262998/GSM8182907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184299,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4917,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.988340860649879,platform_constant,4.988340860649879,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184299,,,train,hesrt,samples/GSE263034/GSM8184299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184300,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,11.05129738483503,platform_constant,11.05129738483503,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184300,,,train,hesrt,samples/GSE263034/GSM8184300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184301,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.391629991765962,platform_constant,10.391629991765962,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184301,,,train,hesrt,samples/GSE263034/GSM8184301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184302,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.34242166060639,platform_constant,10.34242166060639,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184302,,,train,hesrt,samples/GSE263034/GSM8184302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184303,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,11.984236117368583,platform_constant,11.984236117368583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184303,,,train,hesrt,samples/GSE263034/GSM8184303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184304,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.177050334329818,platform_constant,10.177050334329818,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184304,,,train,hesrt,samples/GSE263034/GSM8184304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184305,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.69675579679064,platform_constant,10.69675579679064,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184305,,,train,hesrt,samples/GSE263034/GSM8184305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184306,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.222903640285452,platform_constant,8.222903640285452,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184306,,,train,hesrt,samples/GSE263034/GSM8184306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184307,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,9.680247158006635,platform_constant,9.680247158006635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184307,,,train,hesrt,samples/GSE263034/GSM8184307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8184308,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.62915681510135,platform_constant,10.62915681510135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184308,,,train,hesrt,samples/GSE263034/GSM8184308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184309,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,14.46942691558419,platform_constant,14.46942691558419,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184309,,,train,hesrt,samples/GSE263034/GSM8184309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184310,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.086504850478617,platform_constant,10.086504850478617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184310,,,train,hesrt,samples/GSE263034/GSM8184310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8184311,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,AN1792 Immunized AD (iAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,9.680247158006528,platform_constant,9.680247158006528,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184311,,,train,hesrt,samples/GSE263034/GSM8184311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184312,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,12.662086444888521,platform_constant,12.662086444888521,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184312,,,train,hesrt,samples/GSE263034/GSM8184312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184313,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,12.436032983035675,platform_constant,12.436032983035675,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184313,,,train,hesrt,samples/GSE263034/GSM8184313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8184314,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,11.393140193817283,platform_constant,11.393140193817283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184314,,,train,hesrt,samples/GSE263034/GSM8184314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8184315,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,9.780759016376019,platform_constant,9.780759016376019,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184315,,,train,hesrt,samples/GSE263034/GSM8184315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8184316,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,11.001881113189224,platform_constant,11.001881113189224,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184316,,,train,hesrt,samples/GSE263034/GSM8184316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184317,brain,disease,Alzheimer disease;amyloidosis,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,MONDO:0004975;MONDO:0019065,luna,Alzheimer's disease,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.62915681510146,platform_constant,10.62915681510146,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184317,,,train,hesrt,samples/GSE263034/GSM8184317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184318,brain,normal,,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,,luna,,Non-Neurological Disease (NND),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,12.98669571985796,platform_constant,12.98669571985796,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184318,,,train,hesrt,samples/GSE263034/GSM8184318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8184319,brain,normal,,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,,luna,,Non-Neurological Disease (NND),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.450141305118581,platform_constant,10.450141305118581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184319,,,train,hesrt,samples/GSE263034/GSM8184319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8184320,brain,normal,,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4488,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,,luna,,Non-Neurological Disease (NND),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.891429813877663,platform_constant,8.891429813877663,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184320,,,train,hesrt,samples/GSE263034/GSM8184320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184321,brain,normal,,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4687,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,,luna,,Non-Neurological Disease (NND),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,13.215280191943878,platform_constant,13.215280191943878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184321,,,train,hesrt,samples/GSE263034/GSM8184321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184322,brain,normal,,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4332,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,,luna,,Non-Neurological Disease (NND),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,12.133697678222337,platform_constant,12.133697678222337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184322,,,train,hesrt,samples/GSE263034/GSM8184322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8184323,brain,normal,,frontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4973,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset1],GSE263034,GSE263034,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001870,Frontal Cortex,,luna,,Non-Neurological Disease (NND),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,13.215125311343094,platform_constant,13.215125311343094,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40050704,,GSM8184323,,,train,hesrt,samples/GSE263034/GSM8184323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8185212,brain,disease,Alzheimer disease;amyloidosis,middle frontal gyrus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,14336,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002702,Left Middle Frontal Gyrus,MONDO:0004975;MONDO:0019065,luna,,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-3fdc3d774636,library_alias,GSM8185220,train,sda-all,samples/GSE263079/GSM8185212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8185213,brain,disease,Alzheimer disease;amyloidosis,superior temporal gyrus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,14336,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002769,Left Superior Temporal Gyrus,MONDO:0004975;MONDO:0019065,luna,,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-97e7bcbfe560,library_alias,GSM8185221,train,sda-all,samples/GSE263079/GSM8185213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8185214,brain,disease,Alzheimer disease;amyloidosis,inferior parietal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,14336,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006088,Left Inferior Parietal Lobule,MONDO:0004975;MONDO:0019065,luna,,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-7fbf26e24598,library_alias,GSM8185222,train,sda-all,samples/GSE263079/GSM8185214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8185215,brain,disease,Alzheimer disease;amyloidosis,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,14336,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Posterior Hippocampus,MONDO:0004975;MONDO:0019065,luna,,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,40050704,,CG-72e422188c38,library_alias,GSM8185223,train,sda-all,samples/GSE263079/GSM8185215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8185216,brain,disease,Alzheimer disease;amyloidosis,middle frontal gyrus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,14336,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002702,Left Middle Frontal Gyrus,MONDO:0004975;MONDO:0019065,luna,,lecanemab Immunized AD (iAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-91e1b6442348,library_alias,GSM8185224,train,sda-all,samples/GSE263079/GSM8185216,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8185217,brain,disease,Alzheimer disease;amyloidosis,superior temporal gyrus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,14336,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002769,Left Superior Temporal Gyrus,MONDO:0004975;MONDO:0019065,luna,,lecanemab Immunized AD (iAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-35378630e986,library_alias,GSM8185225,train,sda-all,samples/GSE263079/GSM8185217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8185218,brain,disease,Alzheimer disease;amyloidosis,inferior parietal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,14336,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006088,Left Inferior Parietal Lobule,MONDO:0004975;MONDO:0019065,luna,,lecanemab Immunized AD (iAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,,,,40050704,,CG-df1157fd57ff,library_alias,GSM8185226,train,sda-all,samples/GSE263079/GSM8185218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8185219,brain,disease,Alzheimer disease;amyloidosis,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,14336,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Posterior Hippocampus,MONDO:0004975;MONDO:0019065,luna,,lecanemab Immunized AD (iAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,,,,40050704,,CG-f4632808653b,library_alias,GSM8185227,train,sda-all,samples/GSE263079/GSM8185219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8675576,brain,disease,Alzheimer disease;amyloidosis,middle frontal gyrus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,7441,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002702,Left Middle Frontal Gyrus,MONDO:0004975;MONDO:0019065,luna,,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,40050704,,CG-33248fbf5205,library_alias,GSM8675584,train,sda-all,samples/GSE263079/GSM8675576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8675577,brain,disease,Alzheimer disease;amyloidosis,superior temporal gyrus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,14108,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002769,Left Superior Temporal Gyrus,MONDO:0004975;MONDO:0019065,luna,,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,40050704,,CG-82d11bb923f1,library_alias,GSM8675585,train,sda-all,samples/GSE263079/GSM8675577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8675578,brain,disease,Alzheimer disease;amyloidosis,inferior parietal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,9564,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006088,Left Inferior Parietal Lobule,MONDO:0004975;MONDO:0019065,luna,,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,7.075183968716441,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40050704,,CG-5baa762b2007,library_alias,GSM8675586,train,sda-all,samples/GSE263079/GSM8675578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8675579,brain,disease,Alzheimer disease;amyloidosis,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,10764,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Posterior Hippocampus,MONDO:0004975;MONDO:0019065,luna,,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,7.253270006680917,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40050704,,CG-55668d846e68,library_alias,GSM8675587,train,sda-all,samples/GSE263079/GSM8675579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8675582,brain,disease,Alzheimer disease;amyloidosis,inferior parietal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,13299,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006088,Left Inferior Parietal Lobule,MONDO:0004975;MONDO:0019065,luna,,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,,,,40050704,,CG-3c3335769421,library_alias,GSM8675590,train,sda-all,samples/GSE263079/GSM8675582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8675583,brain,disease,Alzheimer disease;amyloidosis,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,10003,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease [dataset3],GSE263079,GSE263079,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Posterior Hippocampus,MONDO:0004975;MONDO:0019065,luna,,Non-Immunized AD (nAD),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,,,,40050704,,CG-cc036fae2592,library_alias,GSM8675591,train,sda-all,samples/GSE263079/GSM8675583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8185653,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2716,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis [Mouse_Spatial],GSE263088,GSE263088,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Vehicle,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.8958036958173055,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8185653,,,train,sda-all,samples/GSE263088/GSM8185653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8185654,lung,disease,sarcoidosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2276,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis [Mouse_Spatial],GSE263088,GSE263088,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0019338,mondo_predicate (Luna: perturbation),,"Rapamycin, 8h",luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.9266904613119595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8185654,,,train,sda-all,samples/GSE263088/GSM8185654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8185655,lung,disease,sarcoidosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2791,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis [Mouse_Spatial],GSE263088,GSE263088,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0019338,mondo_predicate (Luna: perturbation),,"Rapamycin, 2h",luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.001259568355681,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8185655,,,train,sda-all,samples/GSE263088/GSM8185655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8185656,lung,disease,sarcoidosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2174,Spatial Transcriptomics identifies Prosaposin (PSAP) as a Novel Therapeutic Vulnerability in Pulmonary Sarcoidosis [Mouse_Spatial],GSE263088,GSE263088,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0019338,mondo_predicate (Luna: perturbation),,Vehicle,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.8960284112791475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8185656,,,train,sda-all,samples/GSE263088/GSM8185656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8187469,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,undetermined,3860,Spatial transcriptomic sequencing data of human small cell lung cancer,GSE263196,GSE263196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0008433,luna,small cell lung cancer,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33542,counts,um,1.0,verified,13.590174146641075,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8187469,,,train,sda-all,samples/GSE263196/GSM8187469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8187470,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2709,Spatial transcriptomic sequencing data of human small cell lung cancer,GSE263196,GSE263196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0008433,luna,small cell lung cancer,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33542,counts,um,1.0,verified,14.042014367231154,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8187470,,,train,sda-all,samples/GSE263196/GSM8187470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8187471,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3030,Spatial transcriptomic sequencing data of human small cell lung cancer,GSE263196,GSE263196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0008433,luna,small cell lung cancer,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33542,counts,um,1.0,verified,13.835421726948812,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8187471,,,train,sda-all,samples/GSE263196/GSM8187471,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8187472,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3520,Spatial transcriptomic sequencing data of human small cell lung cancer,GSE263196,GSE263196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0008433,luna,small cell lung cancer,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33542,counts,um,1.0,verified,14.14559453296679,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8187472,,,train,sda-all,samples/GSE263196/GSM8187472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8187473,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,undetermined,2655,Spatial transcriptomic sequencing data of human small cell lung cancer,GSE263196,GSE263196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0008433,luna,small cell lung cancer,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,33542,counts,um,1.0,verified,13.480321660050468,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8187473,,,train,sda-all,samples/GSE263196/GSM8187473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189150,blood vessel,normal,,cephalic vein,primary tissue,Canis lupus familiaris,dog,not stated,male,Visium,Visium,True,H&E,798,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,GSE263281,GSE263281,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001106,Cephalic vein,,luna,,Control,luna,not stated,,extracted field,male,GSE263281:canine 1,canine 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35555,counts,pixel,4.137396499963007,platform_constant,4.137396499963007,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189150,,,train,hesrt,samples/GSE263281/GSM8189150,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189151,blood vessel,perturbation,,cephalic vein,primary tissue,Canis lupus familiaris,dog,not stated,male,Visium,Visium,True,H&E,968,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,GSE263281,GSE263281,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001106,Cephalic vein,,luna,,Grafted,luna,not stated,,extracted field,male,GSE263281:canine 1,canine 1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35555,counts,pixel,7.511637446338835,platform_constant,7.511637446338835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189151,,,train,hesrt,samples/GSE263281/GSM8189151,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189152,blood vessel,normal,,cephalic vein,primary tissue,Canis lupus familiaris,dog,not stated,male,Visium,Visium,True,H&E,393,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,GSE263281,GSE263281,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001106,Cephalic vein,,luna,,Control,luna,not stated,,extracted field,male,GSE263281:canine 2,canine 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35555,counts,pixel,5.934545435554907,platform_constant,5.934545435554907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189152,,,train,hesrt,samples/GSE263281/GSM8189152,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189153,blood vessel,perturbation,,cephalic vein,primary tissue,Canis lupus familiaris,dog,not stated,male,Visium,Visium,True,H&E,916,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,GSE263281,GSE263281,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001106,Cephalic vein,,luna,,Distension,luna,not stated,,extracted field,male,GSE263281:canine 2,canine 2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35555,counts,pixel,5.934545435554907,platform_constant,5.934545435554907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189153,,,train,hesrt,samples/GSE263281/GSM8189153,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8189154,blood vessel,normal,,cephalic vein,primary tissue,Canis lupus familiaris,dog,not stated,male,Visium,Visium,True,H&E,305,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,GSE263281,GSE263281,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001106,Cephalic vein,,luna,,Control,luna,not stated,,extracted field,male,GSE263281:canine 3,canine 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35555,counts,pixel,4.36454555084916,platform_constant,4.36454555084916,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189154,,,train,hesrt,samples/GSE263281/GSM8189154,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.84, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8189155,blood vessel,perturbation,,cephalic vein,primary tissue,Canis lupus familiaris,dog,not stated,male,Visium,Visium,True,H&E,725,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,GSE263281,GSE263281,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001106,Cephalic vein,,luna,,Distension,luna,not stated,,extracted field,male,GSE263281:canine 3,canine 3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35555,counts,pixel,6.54545402181822,platform_constant,6.54545402181822,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189155,,,train,hesrt,samples/GSE263281/GSM8189155,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8189156,blood vessel,normal,,cephalic vein,primary tissue,Canis lupus familiaris,dog,not stated,female,Visium,Visium,True,H&E,305,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,GSE263281,GSE263281,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001106,Cephalic vein,,luna,,Control,luna,not stated,,extracted field,female,GSE263281:canine 4,canine 4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35555,counts,pixel,4.04814825105208,platform_constant,4.04814825105208,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189156,,,train,hesrt,samples/GSE263281/GSM8189156,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8189157,blood vessel,perturbation,,cephalic vein,primary tissue,Canis lupus familiaris,dog,not stated,female,Visium,Visium,True,H&E,493,Spatial gene expression of canine veins during carotid-cartoid vein bypass implantation,GSE263281,GSE263281,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0001106,Cephalic vein,,luna,,Distension,luna,not stated,,extracted field,female,GSE263281:canine 4,canine 4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35555,counts,pixel,4.092592482092592,platform_constant,4.092592482092592,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38808504,10.1161/circresaha.123.323939,GSM8189157,,,train,hesrt,samples/GSE263281/GSM8189157,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189707,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,False,,2133,"Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale",GSE263333,GSE263333,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,luna,embryonic,,not stated,,,,fixed frozen,fixed frozen,release v3,sequencing-based,visium,,,spot,48440,counts,um,1.0,verified,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,no image,39345645;39870864,,GSM8189707,,,train,sda-all,samples/GSE263333/GSM8189707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8189709,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,False,,2224,"Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale",GSE263333,GSE263333,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,luna,embryonic,,not stated,,,,fixed frozen,fixed frozen,release v3,sequencing-based,visium,,,spot,48440,counts,um,1.0,verified,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,no image,39345645;39870864,,GSM8189709,,,train,sda-all,samples/GSE263333/GSM8189709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8189712,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,2500,"Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale",GSE263333,GSE263333,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,neonatal or infant,,not stated,,,,fixed frozen,fixed frozen,release v3,sequencing-based,visium,,,spot,48440,counts,um,1.0,verified,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,FAIL,registration correct (acceptance too strict),"expression looks correct, but the image is missing",39345645;39870864,,GSM8189712,,,train,sda-all,samples/GSE263333/GSM8189712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8494158,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,False,,9686,"Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale",GSE263333,GSE263333,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,,luna,embryonic,,not stated,,,,fixed frozen,fixed frozen,release v3,sequencing-based,visium,,,spot,48440,counts,um,1.0,verified,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,no image at all,39345645;39870864,,GSM8494158,,,train,sda-all,samples/GSE263333/GSM8494158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8192449,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Stereo-seq,Stereo-seq,False,,37036,Spatial transcriptomic mapping of the mouse brain in chronic stress,GSE263450,GSE263450,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,extracted field,Male,,,,,release v3,sequencing-based,Stereo-seq,,,cell,30011,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192449,,,test,sda-all,samples/GSE263450/GSM8192449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8192450,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Stereo-seq,Stereo-seq,False,,41790,Spatial transcriptomic mapping of the mouse brain in chronic stress,GSE263450,GSE263450,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,extracted field,Male,,,,,release v3,sequencing-based,Stereo-seq,,,cell,30011,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192450,,,test,sda-all,samples/GSE263450/GSM8192450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8192451,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Stereo-seq,Stereo-seq,False,,52151,Spatial transcriptomic mapping of the mouse brain in chronic stress,GSE263450,GSE263450,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,extracted field,Male,,,,,release v3,sequencing-based,Stereo-seq,,,cell,30011,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192451,,,test,sda-all,samples/GSE263450/GSM8192451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8192452,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Stereo-seq,Stereo-seq,False,,52334,Spatial transcriptomic mapping of the mouse brain in chronic stress,GSE263450,GSE263450,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,extracted field,Male,,,,,release v3,sequencing-based,Stereo-seq,,,cell,30011,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192452,,,test,sda-all,samples/GSE263450/GSM8192452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8192453,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Stereo-seq,Stereo-seq,False,,36509,Spatial transcriptomic mapping of the mouse brain in chronic stress,GSE263450,GSE263450,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,extracted field,Male,,,,,release v3,sequencing-based,Stereo-seq,,,cell,30011,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192453,,,test,sda-all,samples/GSE263450/GSM8192453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8192454,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Stereo-seq,Stereo-seq,False,,46848,Spatial transcriptomic mapping of the mouse brain in chronic stress,GSE263450,GSE263450,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,C57BL/6J,luna,not stated,,extracted field,Male,,,,,release v3,sequencing-based,Stereo-seq,,,cell,30011,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,40269152,,GSM8192454,,,test,sda-all,samples/GSE263450/GSM8192454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8193670,head and neck,disease,laryngeal squamous cell carcinoma,,tumour tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,159362,Open-ST: High-resolution spatial transcriptomics in 3D [xenium],GSE263498,GSE263498,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,laryngeal squamous cell carcinoma (pT3 pN2c (2/29) L0 V0 Pn0 G2 R0),MONDO:0005595,luna,,,age rule: age in years,adult,56 year old,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000088600118133,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38917789,,GSM8193670,,,train,sda-all,samples/GSE263498/GSM8193670,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8193671,lymph node,disease,head and neck squamous cell carcinoma,cervical lymph node,metastasis,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,309309,Open-ST: High-resolution spatial transcriptomics in 3D [xenium],GSE263498,GSE263498,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,metastatic level III cervical lymph node,MONDO:0010150,luna,,,age rule: age in years,adult,56 year old,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000008611780916,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,38917789,,GSM8193671,,,train,sda-all,samples/GSE263498/GSM8193671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8194116,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4996,An Allele Agnostic Mutant KRAS Inhibitor Demonstrates Broad Spectrum Tumour Growth Inhibition in Pancreatic Ductal Adenocarcinoma,GSE263536,GSE263536,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,,Vehicle/PanKRASi,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.354021690692121,platform_constant,6.354021690692121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8194116,,,train,hesrt,samples/GSE263536/GSM8194116,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.64, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8195047,heart,disease,cardiomyopathy,heart,organoid,Homo sapiens,human,not stated,male,CosMx,CosMx,False,,21457,Cardiac organoids for Hypertophic cardiomyopathy,GSE263591,GSE263591+GSE263607,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000948,Cardiac organoids,MONDO:0004994,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,extracted field,Male,,,,,release v3,imaging-based,cosmx,,,cell,986,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39594661,,GSM8195047,,,train,sda-all,samples/GSE263591/GSM8195047,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.78, ""life_stage"": 0.99}",,
GSM8196101,bone,normal,,femur,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1962,Spatial Transcriptomics in Bone Mechanomics: Exploring the Mechanoregulation of Fracture Healing in the Era of Spatial Omics.,GSE263658,GSE263658,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000981,Femur,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.117466871137864,platform_constant,4.117466871137864,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39742473,10.1126/sciadv.adp8496,GSM8196101,,,train,hesrt,samples/GSE263658/GSM8196101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8196102,bone,perturbation,,femur,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1436,Spatial Transcriptomics in Bone Mechanomics: Exploring the Mechanoregulation of Fracture Healing in the Era of Spatial Omics.,GSE263658,GSE263658,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000981,Femur,,luna,,Loaded,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.545454545454546,platform_constant,4.545454545454546,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39742473,10.1126/sciadv.adp8496,GSM8196102,,,train,hesrt,samples/GSE263658/GSM8196102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8199179,brain,disease,Alzheimer disease;amyloidosis,brain,primary tissue,Mus musculus,house mouse,aged,unknown,Stereo-seq,Stereo-seq,False,,176772,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,GSE263793,GSE263793,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975;MONDO:0019065,luna,,APP-NLGF,age rule: age with unit,aged,18M,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,26730,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,38819990,,GSM8199179,,,train,sda-all,samples/GSE263793/GSM8199179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8199180,brain,disease,Alzheimer disease;amyloidosis,brain,primary tissue,Mus musculus,house mouse,aged,unknown,Stereo-seq,Stereo-seq,False,,176867,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,GSE263793,GSE263793,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975;MONDO:0019065,luna,,APP-NLGF,age rule: age with unit,aged,18M,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,27040,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,38819990,,GSM8199180,,,train,sda-all,samples/GSE263793/GSM8199180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM8199181,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,unknown,Stereo-seq,Stereo-seq,False,,177831,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,GSE263793,GSE263793,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,C57BL/6J,age rule: age with unit,aged,18M,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,26362,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,38819990,,GSM8199181,,,train,sda-all,samples/GSE263793/GSM8199181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8199182,brain,disease,Alzheimer disease;amyloidosis,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Stereo-seq,Stereo-seq,False,,180057,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,GSE263793,GSE263793,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975;MONDO:0019065,luna,,APP-NLGF &  C57BL/6J,age rule: age with unit,adult,3M,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,27281,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,38819990,,GSM8199182,,,train,sda-all,samples/GSE263793/GSM8199182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8199183,brain,disease,Alzheimer disease;amyloidosis,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Stereo-seq,Stereo-seq,False,,176768,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,GSE263793,GSE263793,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975;MONDO:0019065,luna,,APP-NLGF &  C57BL/6J,age rule: age with unit,adult,3M,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,26811,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,38819990,,GSM8199183,,,train,sda-all,samples/GSE263793/GSM8199183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8199188,brain,disease,amyloidosis,brain,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,False,,21713,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,GSE263793,GSE263793,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,MONDO:0019065,luna,AD,,age rule: age with unit,aged,18M,extracted field,male,,,,,release v3,imaging-based,CosMx,,,cell,960,counts,pixel,,unresolved,,ABSENT,FAILED,VERIFIED,,,VERIFIED,,,,38819990,,GSM8199188,,,train,sda-all,samples/GSE263793/GSM8199188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8199189,brain,disease,amyloidosis,brain,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,False,,21404,Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics,GSE263793,GSE263793,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,MONDO:0019065,luna,AD,,age rule: age with unit,aged,18M,extracted field,male,,,,,release v3,imaging-based,CosMx,,,cell,960,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,38819990,,GSM8199189,,,train,sda-all,samples/GSE263793/GSM8199189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8200276,lymph node,disease,,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3472,"Multi-omics sequencing reveals the signature of the genome, cell composition and transcriptome of nodal RDD [ST]",GSE263860,GSE263860,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,RDD lesion,,luna,Rosai-Dorfman disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,58825,counts,pixel,4.056830777646162,platform_constant,4.056830777646162,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8200276,,,train,hesrt,samples/GSE263860/GSM8200276,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.55, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8207499,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3496,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,GSE263920,GSE263920,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,high-grade serous ovarian cancer,MONDO:0008170,luna,high-grade serous ovarian cancer,Non-recurrent,age rule: bare number read as years,adult,51,extracted field,female,GSE263920:GSM8207499,GSM8207499,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.7236735535142165,platform_constant,2.7236735535142165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207499,,,val,hesrt,samples/GSE263920/GSM8207499,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207500,ovary,disease,ovarian cancer,,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3598,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,GSE263920,GSE263920,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,high-grade serous ovarian cancer,MONDO:0008170,luna,high-grade serous ovarian cancer,Non-recurrent,age rule: bare number read as years,aged,65,extracted field,female,GSE263920:GSM8207500,GSM8207500,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.6315789473684212,platform_constant,2.6315789473684212,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207500,,,val,hesrt,samples/GSE263920/GSM8207500,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207501,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2632,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,GSE263920,GSE263920,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,high-grade serous ovarian cancer,MONDO:0008170,luna,high-grade serous ovarian cancer,Non-recurrent,age rule: bare number read as years,adult,64,extracted field,female,GSE263920:GSM8207501,GSM8207501,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.7236735535142165,platform_constant,2.7236735535142165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207501,,,val,hesrt,samples/GSE263920/GSM8207501,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.30000000000000004, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207502,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3613,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,GSE263920,GSE263920,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,high-grade serous ovarian cancer,MONDO:0008170,luna,high-grade serous ovarian cancer,Recurrent,age rule: bare number read as years,adult,45,extracted field,female,GSE263920:GSM8207502,GSM8207502,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.7896417632583534,platform_constant,2.7896417632583534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207502,,,val,hesrt,samples/GSE263920/GSM8207502,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207503,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4033,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,GSE263920,GSE263920,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,high-grade serous ovarian cancer,MONDO:0008170,luna,high-grade serous ovarian cancer,Recurrent,age rule: bare number read as years,adult,61,extracted field,female,GSE263920:GSM8207503,GSM8207503,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.7896417632583534,platform_constant,2.7896417632583534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207503,,,val,hesrt,samples/GSE263920/GSM8207503,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207504,ovary,disease,ovarian cancer,,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4555,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,GSE263920,GSE263920,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,high-grade serous ovarian cancer,MONDO:0008170,luna,high-grade serous ovarian cancer,Recurrent,age rule: bare number read as years,adult,49,extracted field,female,GSE263920:GSM8207504,GSM8207504,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.9411764705882355,platform_constant,2.9411764705882355,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207504,,,val,hesrt,samples/GSE263920/GSM8207504,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 0.49, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8207505,ovary,disease,ovarian cancer,,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3100,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,GSE263920,GSE263920,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,high-grade serous ovarian cancer,MONDO:0008170,luna,high-grade serous ovarian cancer,Recurrent,age rule: bare number read as years,adult,49,extracted field,female,GSE263920:GSM8207505,GSM8207505,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.7236735535142165,platform_constant,2.7236735535142165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207505,,,val,hesrt,samples/GSE263920/GSM8207505,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 0.31, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8207506,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4520,Analysis of Spatial Transcriptomics for Unveiling the novel molecular characteristics of Recurrent and Non-Recurrent High-Grade Serous Ovarian Cancer,GSE263920,GSE263920,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,high-grade serous ovarian cancer,MONDO:0008170,luna,high-grade serous ovarian cancer,Recurrent,age rule: bare number read as years,adult,34,extracted field,female,GSE263920:GSM8207506,GSM8207506,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,2.7777777777777777,platform_constant,2.7777777777777777,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39135097,,GSM8207506,,,val,hesrt,samples/GSE263920/GSM8207506,sda-tissue-disease-2.3,"{""organ"": 0.53, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 0.98}",organ;uberon,low_confidence_annotation
GSM8211614,liver,normal,,liver,primary tissue,Marmota monax,woodchuck,not stated,unknown,Visium,Visium,False,,2948,A Single-Cell Woodchuck Liver Atlas Identifies Healthy and Disease-related Cellular Programs Conserved in Human [spatial transcriptomics],GSE264107,GSE264107,9995,Marmota monax,9995,,False,False,GEO organism field,Marmota monax,,luna,UBERON:0002107,Liver,,luna,,Healthy,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,27295,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8211614,,,train,sda-all,samples/GSE264107/GSM8211614,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8211615,liver,normal,,liver,primary tissue,Marmota monax,woodchuck,not stated,unknown,Visium,Visium,False,,2888,A Single-Cell Woodchuck Liver Atlas Identifies Healthy and Disease-related Cellular Programs Conserved in Human [spatial transcriptomics],GSE264107,GSE264107,9995,Marmota monax,9995,,False,False,GEO organism field,Marmota monax,,luna,UBERON:0002107,Liver,,luna,,Healthy,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,27295,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8211615,,,train,sda-all,samples/GSE264107/GSM8211615,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8208231,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1977,Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing,GSE264233,GSE264233,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0002771,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,5.307478107790751,platform_constant,5.307478107790751,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40719154,,GSM8208231,,,val,hesrt,samples/GSE264233/GSM8208231,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.23, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8208232,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1036,Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing,GSE264233,GSE264233,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0002771,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.737964914563186,platform_constant,4.737964914563186,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40719154,,GSM8208232,,,val,hesrt,samples/GSE264233/GSM8208232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.21, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8208234,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2025,Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing,GSE264233,GSE264233,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0002771,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,5.307778701767571,platform_constant,5.307778701767571,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40719154,,GSM8208234,,,val,hesrt,samples/GSE264233/GSM8208234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8216244,pancreas,disease,type 2 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1081,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreas,MONDO:0005148,luna,T2D,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.005930677188378,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40890166,,GSM8216244,,,train,sda-all,samples/GSE264331/GSM8216244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216245,pancreas,disease,type 2 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1026,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005148,luna,T2D,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.375739824765737,platform_constant,4.375739824765737,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216245,,,train,hesrt,samples/GSE264331/GSM8216245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216246,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1849,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,NGT,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.091154468787698,platform_constant,4.091154468787698,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216246,,,train,hesrt,samples/GSE264331/GSM8216246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216247,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1774,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,NGT,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.091193209374453,platform_constant,4.091193209374453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216247,,,train,hesrt,samples/GSE264331/GSM8216247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216248,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1619,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,NGT,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.137718946994637,platform_constant,4.137718946994637,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216248,,,train,hesrt,samples/GSE264331/GSM8216248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216249,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1681,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,NGT,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.142251447535965,platform_constant,4.142251447535965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216249,,,train,hesrt,samples/GSE264331/GSM8216249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216252,pancreas,disease,type 2 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,702,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005148,luna,T2D,T2D,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.2923926611579401,platform_constant,0.500010119615907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216252,,,train,hesrt,samples/GSE264331/GSM8216252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216253,pancreas,disease,type 2 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,721,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005148,luna,T2D,T2D,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.2923926611579401,platform_constant,0.5000054916841026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216253,,,train,hesrt,samples/GSE264331/GSM8216253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216254,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1690,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,NGT,NGT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.29238641194261267,platform_constant,0.5000125783953269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216254,,,train,hesrt,samples/GSE264331/GSM8216254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216255,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1575,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,NGT,NGT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.2923926611579401,platform_constant,0.4999980259939613,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216255,,,train,hesrt,samples/GSE264331/GSM8216255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216256,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2168,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,NGT,NGT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.29239641087947615,platform_constant,0.50000159555097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216256,,,train,hesrt,samples/GSE264331/GSM8216256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216257,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1934,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,NGT,NGT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.29239641087947615,platform_constant,0.4999992844196634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216257,,,train,hesrt,samples/GSE264331/GSM8216257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216258,pancreas,disease,type 2 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2284,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005148,luna,T2D,T2D,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.2915439504656608,platform_constant,0.5000054280006929,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216258,,,train,hesrt,samples/GSE264331/GSM8216258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216259,pancreas,disease,type 2 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2257,Type 2 Diabetes Specific Spatial Differential Gene Expression in Pancreas Visium Data,GSE264331,GSE264331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005148,luna,T2D,T2D,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.29239641087947615,platform_constant,0.4999941301106646,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40890166,,GSM8216259,,,train,hesrt,samples/GSE264331/GSM8216259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8216268,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,30802,Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics [Xenium],GSE264334,GSE264334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Renal Biopsy,MONDO:0005240,luna,,Renal Disease Biopsy: IgAN,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49995580636388354,VERIFIED,ABSENT,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,38898271,,GSM8216268,,,train,sda-all,samples/GSE264334/GSM8216268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8217624,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,3949,Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity [Visium],GSE264398,GSE264398,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Fetal lung tissue,,luna,,,luna,fetal,15 gestational weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.732491793201414,platform_constant,5.732491793201414,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003323,,GSM8217624,,,train,hesrt,samples/GSE264398/GSM8217624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8217625,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,4002,Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity [Visium],GSE264398,GSE264398,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Fetal lung tissue,,luna,,,luna,fetal,18 gestational weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.537362568589588,platform_constant,6.537362568589588,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39003323,,GSM8217625,,,train,hesrt,samples/GSE264398/GSM8217625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8217893,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,864688,Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity [Xenium],GSE264425,GSE264425,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,fetal lung tissue,,luna,,,luna,fetal,GW 15,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999427681882697,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39003323,,GSM8217893,,,train,sda-all,samples/GSE264425/GSM8217893,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8217894,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,980410,Early human fetal lung atlas reveals the temporal dynamics of epithelial cell plasticity [Xenium],GSE264425,GSE264425,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,fetal lung tissue,,luna,,,luna,fetal,GW 18,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896351575456,VERIFIED,ABSENT,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,39003323,,GSM8217894,,,train,sda-all,samples/GSE264425/GSM8217894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8226199,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3762,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],GSE264692,GSE264692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,hippocampus,,luna,normal,neurotypical,luna,not stated,,not stated,,GSE264692:Br2720,Br2720,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.451057817558416,platform_constant,4.451057817558416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226199,,,train,hesrt,samples/GSE264692/GSM8226199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8226200,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2618,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],GSE264692,GSE264692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,hippocampus,,luna,normal,neurotypical,luna,not stated,,not stated,,GSE264692:Br2743,Br2743,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.5489169722171505,platform_constant,4.5489169722171505,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226200,,,train,hesrt,samples/GSE264692/GSM8226200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8226201,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],GSE264692,GSE264692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,hippocampus,,luna,normal,neurotypical,luna,not stated,,not stated,,GSE264692:Br3942,Br3942,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.548706784421283,platform_constant,4.548706784421283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226201,,,train,hesrt,samples/GSE264692/GSM8226201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8226202,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3675,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],GSE264692,GSE264692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,hippocampus,,luna,normal,neurotypical,luna,not stated,,not stated,,GSE264692:Br6423,Br6423,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.259746926708571,platform_constant,5.259746926708571,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226202,,,train,hesrt,samples/GSE264692/GSM8226202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8226203,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4697,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],GSE264692,GSE264692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,hippocampus,,luna,normal,neurotypical,luna,not stated,,not stated,,GSE264692:Br6432,Br6432,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.548736425703956,platform_constant,4.548736425703956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226203,,,train,hesrt,samples/GSE264692/GSM8226203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8226204,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4669,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],GSE264692,GSE264692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,hippocampus,,luna,normal,neurotypical,luna,not stated,,not stated,,GSE264692:Br6471,Br6471,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.4350181268238265,platform_constant,4.4350181268238265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226204,,,train,hesrt,samples/GSE264692/GSM8226204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8226205,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4873,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],GSE264692,GSE264692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,hippocampus,,luna,normal,neurotypical,luna,not stated,,not stated,,GSE264692:Br6522,Br6522,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.4350181268238265,platform_constant,4.4350181268238265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226205,,,train,hesrt,samples/GSE264692/GSM8226205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8226206,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4518,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],GSE264692,GSE264692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,hippocampus,,luna,normal,neurotypical,luna,not stated,,not stated,,GSE264692:Br8325,Br8325,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.435198694809457,platform_constant,4.435198694809457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226206,,,train,hesrt,samples/GSE264692/GSM8226206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8226207,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4625,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],GSE264692,GSE264692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,hippocampus,,luna,normal,neurotypical,luna,not stated,,not stated,,GSE264692:Br8492,Br8492,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.4350181268238265,platform_constant,4.4350181268238265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226207,,,train,hesrt,samples/GSE264692/GSM8226207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8226208,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4686,An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [spatial-visium],GSE264692,GSE264692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,hippocampus,,luna,normal,neurotypical,luna,not stated,,not stated,,GSE264692:Br8667,Br8667,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.23176881557771,platform_constant,5.23176881557771,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8226208,,,train,hesrt,samples/GSE264692/GSM8226208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8229742,heart,normal,,heart,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E-like (heuristic),1175,Unravelling the molecular activation of the reparative cardiac fibroblasts after myocardial infarction,GSE265828,GSE265828,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,control,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,21885,counts,um,1.0,verified,4.085602430747868,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41526391,,GSM8229742,,,val,sda-all,samples/GSE265828/GSM8229742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8229743,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E-like (heuristic),1825,Unravelling the molecular activation of the reparative cardiac fibroblasts after myocardial infarction,GSE265828,GSE265828,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0005068,luna,,myocardial infarction,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,21885,counts,um,1.0,verified,4.49347478608157,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41526391,,GSM8229743,,,val,sda-all,samples/GSE265828/GSM8229743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8229744,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E-like (heuristic),1572,Unravelling the molecular activation of the reparative cardiac fibroblasts after myocardial infarction,GSE265828,GSE265828,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0005068,luna,,myocardial infarction,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,21885,counts,um,1.0,verified,4.48399375653996,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41526391,,GSM8229744,,,val,sda-all,samples/GSE265828/GSM8229744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8229745,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E-like (heuristic),1424,Unravelling the molecular activation of the reparative cardiac fibroblasts after myocardial infarction,GSE265828,GSE265828,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0005068,luna,,myocardial infarction,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,21885,counts,um,1.0,verified,4.378208948140522,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41526391,,GSM8229745,,,val,sda-all,samples/GSE265828/GSM8229745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8582411,plant,normal,,,primary tissue,Zea mays,maize,not stated,unknown,Visium,Visium,True,toluidine blue,751,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,GSE266007,GSE266007,4577,Zea mays,4577,,False,False,GEO organism field,Zea mays,,luna,,early ear,,luna,,B73,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39210,unknown,um,1.0,verified,4.282080640123186,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,plant sample; the stain should be stated,41039501,,GSM8582411,,,train,sda-all,samples/GSE266007/GSM8582411,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.86}",,
GSM8582412,plant,normal,,,primary tissue,Zea mays,maize,not stated,unknown,Visium,Visium,True,toluidine blue,831,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,GSE266007,GSE266007,4577,Zea mays,4577,,False,False,GEO organism field,Zea mays,,luna,,early ear,,luna,,B73,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39210,unknown,um,1.0,verified,4.274474613489253,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,plant sample; the stain should be stated,41039501,,GSM8582412,,,train,sda-all,samples/GSE266007/GSM8582412,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": NaN, ""life_stage"": 0.78}",,
GSM8582413,plant,normal,,,primary tissue,Zea mays,maize,not stated,unknown,Visium,Visium,True,toluidine blue,753,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,GSE266007,GSE266007,4577,Zea mays,4577,,False,False,GEO organism field,Zea mays,,luna,,early ear,,luna,,B73,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39210,unknown,um,1.0,verified,4.264804506840143,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,plant sample; the stain should be stated,41039501,,GSM8582413,,,train,sda-all,samples/GSE266007/GSM8582413,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.8}",,
GSM8582414,plant,normal,,,primary tissue,Zea mays,maize,not stated,unknown,Visium,Visium,True,toluidine blue,507,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,GSE266007,GSE266007,4577,Zea mays,4577,,False,False,GEO organism field,Zea mays,,luna,,early ear,,luna,,B73,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39210,unknown,um,1.0,verified,4.175114022264149,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,stain too faint / in_tissue drawn by hand,"plant stain, probably not H&E; registration is correct",41039501,,GSM8582414,,,train,sda-all,samples/GSE266007/GSM8582414,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": NaN, ""life_stage"": 0.6900000000000001}",,
GSM8582415,plant,normal,,,primary tissue,Zea mays,maize,not stated,unknown,Visium,Visium,True,toluidine blue,492,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,GSE266007,GSE266007,4577,Zea mays,4577,,False,False,GEO organism field,Zea mays,,luna,,early ear,,luna,,B73,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39210,unknown,um,1.0,verified,4.17650682309922,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,stain too faint / in_tissue drawn by hand,"plant stain, probably not H&E; registration is correct",41039501,,GSM8582415,,,train,sda-all,samples/GSE266007/GSM8582415,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": NaN, ""life_stage"": 0.73}",,
GSM8582416,plant,normal,,,primary tissue,Zea mays,maize,not stated,unknown,Visium,Visium,True,toluidine blue,1121,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,GSE266007,GSE266007,4577,Zea mays,4577,,False,False,GEO organism field,Zea mays,,luna,,early ear,,luna,,B73,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39210,unknown,um,1.0,verified,4.175509943788373,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,stain too faint / in_tissue drawn by hand,plant sample,41039501,,GSM8582416,,,train,sda-all,samples/GSE266007/GSM8582416,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": NaN, ""life_stage"": 0.71}",,
GSM8582417,plant,normal,,,primary tissue,Zea mays,maize,not stated,unknown,Visium,Visium,True,toluidine blue,772,WUSCHEL-dependent cis-regulation in maize inflorescence development at single-cell resolution,GSE266007,GSE266007,4577,Zea mays,4577,,False,False,GEO organism field,Zea mays,,luna,,early ear,,luna,,B73,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,39210,unknown,um,1.0,verified,4.172914482879154,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,plant sample; the stain should be stated,41039501,,GSM8582417,,,train,sda-all,samples/GSE266007/GSM8582417,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": NaN, ""life_stage"": 0.79}",disease_status,low_confidence_annotation
GSM8241316,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3831,10X Visium Spatial transcriptomics of murine small intestine 6 and 14 days post Heligmosomoides polygyrus infection with or without LXR agonist GW3965,GSE266136,GSE266136,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,proximal small intestine,MONDO:0005550,luna,,Standard_Diet_6dpi,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.148965623454898,platform_constant,4.148965623454898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8241316,,,val,hesrt,samples/GSE266136/GSM8241316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8241317,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4679,10X Visium Spatial transcriptomics of murine small intestine 6 and 14 days post Heligmosomoides polygyrus infection with or without LXR agonist GW3965,GSE266136,GSE266136,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,proximal small intestine,MONDO:0005550,luna,,GW3965_Diet_6dpi,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.092517111571127,platform_constant,4.092517111571127,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8241317,,,val,hesrt,samples/GSE266136/GSM8241317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8241318,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4346,10X Visium Spatial transcriptomics of murine small intestine 6 and 14 days post Heligmosomoides polygyrus infection with or without LXR agonist GW3965,GSE266136,GSE266136,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,proximal small intestine,MONDO:0005550,luna,,Standard_Diet_14dpi,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.148965623454898,platform_constant,4.148965623454898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8241318,,,val,hesrt,samples/GSE266136/GSM8241318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.98}",,
GSM8241319,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3478,10X Visium Spatial transcriptomics of murine small intestine 6 and 14 days post Heligmosomoides polygyrus infection with or without LXR agonist GW3965,GSE266136,GSE266136,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,proximal small intestine,MONDO:0005550,luna,,GW3965_Diet_14dpi,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8241319,,,val,hesrt,samples/GSE266136/GSM8241319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.96, ""life_stage"": 0.98}",,
GSM8241481,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3115,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241481,,,train,sda-all,samples/GSE266147/GSM8241481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8241482,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3078,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,5 x 2Gy Irradiation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241482,,,train,sda-all,samples/GSE266147/GSM8241482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8241483,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2538,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241483,,,train,sda-all,samples/GSE266147/GSM8241483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8241484,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3099,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,5 x 2Gy Irradiation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241484,,,train,sda-all,samples/GSE266147/GSM8241484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8241485,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2087,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,5 x 2Gy Irradiation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241485,,,train,sda-all,samples/GSE266147/GSM8241485,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8241486,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1602,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241486,,,train,sda-all,samples/GSE266147/GSM8241486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8241487,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2466,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241487,,,train,sda-all,samples/GSE266147/GSM8241487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8241488,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3281,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241488,,,train,sda-all,samples/GSE266147/GSM8241488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8241489,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2760,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241489,,,train,sda-all,samples/GSE266147/GSM8241489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8241490,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3077,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,5 x 2Gy Irradiation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241490,,,train,sda-all,samples/GSE266147/GSM8241490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8241491,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2481,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,5 x 2Gy Irradiation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241491,,,train,sda-all,samples/GSE266147/GSM8241491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8241492,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3316,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,5 x 2Gy Irradiation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241492,,,train,sda-all,samples/GSE266147/GSM8241492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8241493,brain,disease,brain cancer,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3347,Macrophage-mediated myelin recycling fuels brain cancer malignancy (VISIUM),GSE266147,GSE266147+GSE266149,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain tumor,MONDO:0001657,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39137777,,GSM8241493,,,train,sda-all,samples/GSE266147/GSM8241493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8243006,brain,normal,,main olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,Other,Array-seq,False,,974016,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0009951,Main Olfactory Bulb,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,Female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Array-seq,,,spot,32285,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,39562752,,GSM8243006,,,train,sda-all,samples/GSE266244/GSM8243006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8243007,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Other,Array-seq,True,H&E,28907,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,Array-seq,,,,17853,non-integer,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243007,,,train,hesrt,samples/GSE266244/GSM8243007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243008,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Other,Array-seq,True,H&E,26893,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,Array-seq,,,,17992,non-integer,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243008,,,train,hesrt,samples/GSE266244/GSM8243008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243009,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Other,Array-seq,True,H&E,30111,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,Array-seq,,,,18716,non-integer,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243009,,,train,hesrt,samples/GSE266244/GSM8243009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8243010,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Other,Array-seq,True,H&E,35691,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,Array-seq,,,,18819,non-integer,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243010,,,train,hesrt,samples/GSE266244/GSM8243010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243011,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3055,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,16594,non-integer,pixel,2.2222222222222223,platform_constant,2.2222222222222223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243011,,,train,hesrt,samples/GSE266244/GSM8243011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8243012,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3102,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,16679,non-integer,pixel,2.2222222222222223,platform_constant,2.2222222222222223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243012,,,train,hesrt,samples/GSE266244/GSM8243012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8243013,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3747,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,16816,non-integer,pixel,2.2222222222222223,platform_constant,2.2222222222222223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243013,,,train,hesrt,samples/GSE266244/GSM8243013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243014,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,False,,3886,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,Female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,39562752,,GSM8243014,,,train,sda-all,samples/GSE266244/GSM8243014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243015,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Other,Array-seq,False,,92769,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,Female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Array-seq,,,spot,15144,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,39562752,,GSM8243015,,,train,sda-all,samples/GSE266244/GSM8243015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8243016,other,normal,,,primary tissue,Mus musculus,house mouse,adult,female,Other,Array-seq,False,,974016,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,"Multiple Organ Types (Brain, Kidney, Liver)",,luna,,,age rule: age with unit,juvenile,6 weeks,extracted field,Female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Array-seq,,,spot,32285,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,39562752,,GSM8243016,,,train,sda-all,samples/GSE266244/GSM8243016,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8243017,spleen,normal,,spleen,primary tissue,Homo sapiens,human,aged,female,Other,Array-seq,True,H&E,750640,Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics,GSE266244,GSE266244,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,spleen,,luna,,,age rule: age in years,aged,70 years,extracted field,female,,,,,release v3,sequencing-based,Array-seq,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39562752,10.1038/s41592-024-02501-5,GSM8243017,,,train,hesrt,samples/GSE266244/GSM8243017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8260100,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E-like (heuristic),1635,Transcriptional and functional architecture of the whole neutrophil compartment I,GSE266518,GSE266518+GSE266680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005812,luna,,100 PFU of the virus strain A/PR8/34 (H1N1) were administered intra-nasally,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.164034570126449,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339555,,GSM8260100,,,val,sda-all,samples/GSE266518/GSM8260100,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8260101,lung,disease,lung carcinoma,lung,metastasis,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E-like (heuristic),1724,Transcriptional and functional architecture of the whole neutrophil compartment I,GSE266518,GSE266518+GSE266680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005138,luna,,intravenous injection of Lewis Lung Carcinoma (LLC),luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.173252709730219,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339555,,GSM8260101,,,val,sda-all,samples/GSE266518/GSM8260101,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.38, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8260102,lung,disease,lung carcinoma,lung,metastasis,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E-like (heuristic),2070,Transcriptional and functional architecture of the whole neutrophil compartment I,GSE266518,GSE266518+GSE266680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005138,luna,,intravenous injection of Lewis Lung Carcinoma (LLC),luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.168517413482142,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339555,,GSM8260102,,,val,sda-all,samples/GSE266518/GSM8260102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.58, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8260103,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,blue bright-field stain (heuristic),2087,Transcriptional and functional architecture of the whole neutrophil compartment I,GSE266518,GSE266518+GSE266680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.254704928498514,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339555,,GSM8260103,,,val,sda-all,samples/GSE266518/GSM8260103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8252056,skeletal muscle,normal,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3122,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.271410437870461,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252056,,,train,sda-all,samples/GSE266585/GSM8252056,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.96, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8252057,skeletal muscle,normal,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3122,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.466661659231058,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252057,,,train,sda-all,samples/GSE266585/GSM8252057,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8252058,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3393,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.315961484721912,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252058,,,train,sda-all,samples/GSE266585/GSM8252058,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8252059,skeletal muscle,normal,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3241,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.318939717413582,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252059,,,train,sda-all,samples/GSE266585/GSM8252059,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8252060,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1704,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.543900539343128,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,CG-5307b8e2e862,cross_gse_redeposit,GSM6219596,train,sda-all,samples/GSE266585/GSM8252060,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8252061,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2888,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.660776779375602,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,CG-b9c4851f031e,cross_gse_redeposit,GSM6219595,train,sda-all,samples/GSE266585/GSM8252061,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8252062,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2432,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.533227002803857,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252062,,,train,sda-all,samples/GSE266585/GSM8252062,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8252063,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2815,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,ECM treated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.765917101967729,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252063,,,train,sda-all,samples/GSE266585/GSM8252063,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8252064,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2835,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,ECM treated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.316907336243141,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252064,,,train,sda-all,samples/GSE266585/GSM8252064,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8252065,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1945,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.806886702266913,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,CG-4bc47558cd84,cross_gse_redeposit,GSM6219598,train,sda-all,samples/GSE266585/GSM8252065,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM8252066,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2600,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.921398611224263,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252066,,,train,sda-all,samples/GSE266585/GSM8252066,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8252067,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2291,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,ECM treated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.759608278896929,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252067,,,train,sda-all,samples/GSE266585/GSM8252067,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8252068,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2574,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,ECM treated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.317780416543537,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,GSM8252068,,,train,sda-all,samples/GSE266585/GSM8252068,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8252069,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2099,Deconstruction of cellular dynamics after treatment of volumetric muscle loss injury with extracellular matrix,GSE266585,GSE266585,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0001134,Skeletal Muscle,,luna,,Untreated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Visium,,,spot,32704,counts,um,1.0,verified,4.535651692384362,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41022770,,CG-300ad5df8365,cross_gse_redeposit,GSM6219597,train,sda-all,samples/GSE266585/GSM8252069,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8252339,placenta,normal,,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,12267,Spatial transcriptome analysis for placental tissue of preeclampsia,GSE266604,GSE266604,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,placenta,,luna,,Normal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.200900693238728,platform_constant,8.200900693238728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41604492,,GSM8252339,,,train,hesrt,samples/GSE266604/GSM8252339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8252340,placenta,disease,preeclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,12410,Spatial transcriptome analysis for placental tissue of preeclampsia,GSE266604,GSE266604,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,placenta,MONDO:0005081,luna,Preeclampsia,Preeclampsia,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.40412491794964,platform_constant,8.40412491794964,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41604492,,GSM8252340,,,train,hesrt,samples/GSE266604/GSM8252340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.85}",,
GSM9021740,lung,not stated,,pair of lungs,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),263684,Architecture of the neutrophil compartment in mice,GSE266680,GSE266680,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000170,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium_hd,,,bin,18085,counts,um,1.0,verified,2.4854680880158564,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339555,,GSM9021740,,,train,sda-all,samples/GSE266680/GSM9021740,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.44, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8253800,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,203891,Single cell approaches define forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (MERFISH),GSE266688,GSE266688,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,,,luna,,,luna,adult,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,39823226,,GSM8253800,,,train,sda-all,samples/GSE266688/GSM8253800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8253801,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,193744,Single cell approaches define forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (MERFISH),GSE266688,GSE266688,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,,,luna,,,luna,adult,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,39823226,,GSM8253801,,,train,sda-all,samples/GSE266688/GSM8253801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8253802,brain,disease,,forebrain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,265455,Single cell approaches define forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (MERFISH),GSE266688,GSE266688,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,,,luna,,,luna,adult,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,39823226,,GSM8253802,,,train,sda-all,samples/GSE266688/GSM8253802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8253803,brain,disease,,forebrain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,95624,Single cell approaches define forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (MERFISH),GSE266688,GSE266688,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,,,luna,,,luna,adult,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,39823226,,GSM8253803,,,train,sda-all,samples/GSE266688/GSM8253803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8253804,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,118939,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,control,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.4999963510752165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8253804,,,train,sda-all,samples/GSE266689/GSM8253804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8253805,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,111183,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,control,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.4999939169789284,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8253805,,,train,sda-all,samples/GSE266689/GSM8253805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8253806,brain,disease,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,127215,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,cuprizone-rapamycin,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.4999948328424534,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8253806,,,train,sda-all,samples/GSE266689/GSM8253806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8253807,brain,disease,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,120337,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,cuprizone-rapamycin,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.49999173143707626,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8253807,,,train,sda-all,samples/GSE266689/GSM8253807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.91, ""life_stage"": 0.99}",,
GSM8647384,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,116173,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.4999993908975733,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647384,,,train,sda-all,samples/GSE266689/GSM8647384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647385,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,116358,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.5000097456388266,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647385,,,train,sda-all,samples/GSE266689/GSM8647385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647386,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,110739,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.5000097059737032,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647386,,,train,sda-all,samples/GSE266689/GSM8647386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8647387,brain,disease,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,135899,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,cuprizone-rapamycin,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647387,,,train,sda-all,samples/GSE266689/GSM8647387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8647388,brain,disease,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,122729,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,cuprizone-rapamycin,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.5000096519772764,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647388,,,train,sda-all,samples/GSE266689/GSM8647388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647389,brain,disease,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,159849,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,cuprizone-rapamycin,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.500009697439876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647389,,,train,sda-all,samples/GSE266689/GSM8647389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8647390,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,133619,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,BSA infused,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.49999517268012794,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647390,,,train,sda-all,samples/GSE266689/GSM8647390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8647391,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,123765,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,BSA infused,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.499998620917917,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647391,,,train,sda-all,samples/GSE266689/GSM8647391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8647392,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,121071,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,BSA infused,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.5000110344827586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647392,,,train,sda-all,samples/GSE266689/GSM8647392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647393,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,121843,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,BSA infused,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.5000036907995749,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647393,,,train,sda-all,samples/GSE266689/GSM8647393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647394,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,120877,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,BSA infused,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.5000096519772764,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647394,,,train,sda-all,samples/GSE266689/GSM8647394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8647395,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,125103,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,BSA infused,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.5000055151114052,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647395,,,train,sda-all,samples/GSE266689/GSM8647395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647396,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,152129,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,OSM infused,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.5000097059737032,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647396,,,train,sda-all,samples/GSE266689/GSM8647396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647397,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,144934,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,OSM infused,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.4999917236813065,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647397,,,train,sda-all,samples/GSE266689/GSM8647397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8647398,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,adult,mixed,Xenium,Xenium,True,fluorescence: DAPI,139480,Single cell approached deine forebrain neural stem cell niches and identify microglial ligands that enhance precursor-mediated remyelination (Xenium),GSE266689,GSE266689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,brain,,luna,,OSM infused,luna,adult,adult,extracted field,M/F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.4999875862068965,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39823226;40780964,,GSM8647398,,,train,sda-all,samples/GSE266689/GSM8647398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257561,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,juvenile,unknown,Xenium,Xenium,True,fluorescence: DAPI,78110,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,juvenile,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000116219008265,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257561,,,train,sda-all,samples/GSE266969/GSM8257561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM8257562,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,32377,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000307566126717,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257562,,,train,sda-all,samples/GSE266969/GSM8257562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8257563,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,37985,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000129172264132,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257563,,,train,sda-all,samples/GSE266969/GSM8257563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM8257564,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,juvenile,unknown,Xenium,Xenium,True,fluorescence: DAPI,23109,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,juvenile,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000167785234899,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257564,,,train,sda-all,samples/GSE266969/GSM8257564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8257565,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,98705,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500010350742296,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257565,,,train,sda-all,samples/GSE266969/GSM8257565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM8257566,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38244,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998798076923084,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257566,,,train,sda-all,samples/GSE266969/GSM8257566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8257567,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,91954,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000025815778604,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257567,,,train,sda-all,samples/GSE266969/GSM8257567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM8257568,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,83416,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999862372694742,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257568,,,train,sda-all,samples/GSE266969/GSM8257568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257569,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,60974,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257569,,,train,sda-all,samples/GSE266969/GSM8257569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257570,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,112292,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999827839500504,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257570,,,train,sda-all,samples/GSE266969/GSM8257570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257571,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,124619,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000012903891814,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257571,,,train,sda-all,samples/GSE266969/GSM8257571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257572,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,39076,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000236155390246,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257572,,,train,sda-all,samples/GSE266969/GSM8257572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8257573,brain,disease,brain glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,134142,Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.,GSE266969,GSE266969,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0002501,luna,Glioblastoma,Ntva-INK4a_ARF−/−,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998709477596526,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39255775,,GSM8257573,,,train,sda-all,samples/GSE266969/GSM8257573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8263823,ovary,normal,,ovary,primary tissue,Homo sapiens,human,juvenile,unknown,Stereo-seq,scStereo-seq,False,,78790,Spatial transcriptomic characteristics of the aging human ovary,GSE267315,GSE267315,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000992,ovary,,luna,,,age rule: bare number read as years,juvenile,12,not stated,,,,,,release v3,sequencing-based,scStereo-seq,,,bin,29825,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41243550,,GSM8263823,,,train,sda-all,samples/GSE267315/GSM8263823,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8263824,ovary,normal,,ovary,primary tissue,Homo sapiens,human,adult,unknown,Stereo-seq,scStereo-seq,False,,61577,Spatial transcriptomic characteristics of the aging human ovary,GSE267315,GSE267315,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000992,ovary,,luna,,,age rule: bare number read as years,adult,32,not stated,,,,,,release v3,sequencing-based,scStereo-seq,,,bin,31922,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41243550,,GSM8263824,,,train,sda-all,samples/GSE267315/GSM8263824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8263825,ovary,normal,,ovary,primary tissue,Homo sapiens,human,adult,unknown,Stereo-seq,scStereo-seq,False,,50340,Spatial transcriptomic characteristics of the aging human ovary,GSE267315,GSE267315,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000992,ovary,,luna,,,age rule: bare number read as years,adult,34,not stated,,,,,,release v3,sequencing-based,scStereo-seq,,,bin,31016,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41243550,,GSM8263825,,,train,sda-all,samples/GSE267315/GSM8263825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8263826,ovary,normal,,ovary,primary tissue,Homo sapiens,human,adult,unknown,Stereo-seq,scStereo-seq,False,,91519,Spatial transcriptomic characteristics of the aging human ovary,GSE267315,GSE267315,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000992,ovary,,luna,,,age rule: bare number read as years,adult,42,not stated,,,,,,release v3,sequencing-based,scStereo-seq,,,bin,33245,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41243550,,GSM8263826,,,train,sda-all,samples/GSE267315/GSM8263826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8265211,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4690,Spatial transcriptomics of colorectal cancer tissues,GSE267401,GSE267401,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colorectal cancer,MONDO:0005575,luna,colorectal cancer,primary tissue,luna,not stated,,not stated,,GSE267401:21,21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,10.243201685526548,platform_constant,10.243201685526548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39499374,,GSM8265211,,,train,hesrt,samples/GSE267401/GSM8265211,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.63, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8265212,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3884,Spatial transcriptomics of colorectal cancer tissues,GSE267401,GSE267401,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer,MONDO:0005575,luna,colorectal cancer,metastasis tissue,luna,not stated,,not stated,,GSE267401:21,21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,11.173462403761958,platform_constant,11.173462403761958,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39499374,,GSM8265212,,,train,hesrt,samples/GSE267401/GSM8265212,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 0.6000000000000001, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8265213,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3721,Spatial transcriptomics of colorectal cancer tissues,GSE267401,GSE267401,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colorectal cancer,MONDO:0005575,luna,colorectal cancer,primary tissue,luna,not stated,,not stated,,GSE267401:17,17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,11.17346240376202,platform_constant,11.17346240376202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39499374,,GSM8265213,,,train,hesrt,samples/GSE267401/GSM8265213,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.78, ""disease_status"": 1.0, ""uberon"": 0.56, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8265214,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4757,Spatial transcriptomics of colorectal cancer tissues,GSE267401,GSE267401,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer,MONDO:0005575,luna,colorectal cancer,metastasis tissue,luna,not stated,,not stated,,GSE267401:17,17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,9.079342695409164,platform_constant,9.079342695409164,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39499374,,GSM8265214,,,train,hesrt,samples/GSE267401/GSM8265214,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.71, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8268371,lymph node,normal,,axillary lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,"fluorescence: single channel, grayscale (heuristic)",809,TLR4-dependent fibroblast-monocyte axis in tumor-draining lymph nodes contributes to metastasis in triple-negative breast cancer,GSE267534,GSE267534,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001097,Lymph node (axillary),,luna,,Control (naïve),luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.329489421081613,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the stain / fluorescence should be stated,40957419,,GSM8268371,,,train,sda-all,samples/GSE267534/GSM8268371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8268372,lymph node,disease,triple-negative breast carcinoma,axillary lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,"fluorescence: single channel, grayscale (heuristic)",1954,TLR4-dependent fibroblast-monocyte axis in tumor-draining lymph nodes contributes to metastasis in triple-negative breast cancer,GSE267534,GSE267534,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001097,Lymph node (axillary),MONDO:0005494,luna,,Tumor mice 67NR,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.306185796326132,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the stain / fluorescence should be stated,40957419,,GSM8268372,,,train,sda-all,samples/GSE267534/GSM8268372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8268373,lymph node,disease,triple-negative breast carcinoma,axillary lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,"fluorescence: single channel, grayscale (heuristic)",1652,TLR4-dependent fibroblast-monocyte axis in tumor-draining lymph nodes contributes to metastasis in triple-negative breast cancer,GSE267534,GSE267534,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001097,Lymph node (axillary),MONDO:0005494,luna,,Tumor mice 4T1,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.271101254152593,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the stain / fluorescence should be stated,40957419,,GSM8268373,,,train,sda-all,samples/GSE267534/GSM8268373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8279107,unknown,disease,desmoplastic small round cell tumor,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4240,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],GSE267806,GSE267806,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Desmoplastic Small Round Cell Tumor,MONDO:0019373,luna,Desmoplastic Small Round Cell Tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9622128599461375,platform_constant,3.9622128599461375,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279107,,,train,hesrt,samples/GSE267806/GSM8279107,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8279108,other,disease,desmoplastic small round cell tumor,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3452,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],GSE267806,GSE267806,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Desmoplastic Small Round Cell Tumor,MONDO:0019373,luna,Desmoplastic Small Round Cell Tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9974448514766765,platform_constant,3.9974448514766765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279108,,,train,hesrt,samples/GSE267806/GSM8279108,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8279109,other,disease,desmoplastic small round cell tumor,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3583,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],GSE267806,GSE267806,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Desmoplastic Small Round Cell Tumor,MONDO:0019373,luna,Desmoplastic Small Round Cell Tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0917422324035275,platform_constant,4.0917422324035275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279109,,,train,hesrt,samples/GSE267806/GSM8279109,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8279110,other,disease,desmoplastic small round cell tumor,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3537,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],GSE267806,GSE267806,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Desmoplastic Small Round Cell Tumor,MONDO:0019373,luna,Desmoplastic Small Round Cell Tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.06203675876404,platform_constant,4.06203675876404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279110,,,train,hesrt,samples/GSE267806/GSM8279110,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8279111,other,disease,desmoplastic small round cell tumor,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3215,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],GSE267806,GSE267806,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Desmoplastic Small Round Cell Tumor,MONDO:0019373,luna,Desmoplastic Small Round Cell Tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.053448175843248,platform_constant,4.053448175843248,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279111,,,train,hesrt,samples/GSE267806/GSM8279111,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8279112,other,disease,desmoplastic small round cell tumor,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3697,Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [Visium: Spatial transcriptomics],GSE267806,GSE267806,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Desmoplastic Small Round Cell Tumor,MONDO:0019373,luna,Desmoplastic Small Round Cell Tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.301034700347972,platform_constant,4.301034700347972,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38781959;40088092,,GSM8279112,,,train,hesrt,samples/GSE267806/GSM8279112,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8281384,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4475,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Control,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.005576749644748,platform_constant,4.005576749644748,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281384,,,train,hesrt,samples/GSE267904/GSM8281384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8281385,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3906,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Control,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.031267449596859,platform_constant,4.031267449596859,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281385,,,train,hesrt,samples/GSE267904/GSM8281385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8281386,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4521,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Control,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.087681730064042,platform_constant,4.087681730064042,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281386,,,train,hesrt,samples/GSE267904/GSM8281386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8281387,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3609,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.115053249433274,platform_constant,4.115053249433274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281387,,,train,hesrt,samples/GSE267904/GSM8281387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8281388,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3875,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.07115099887133,platform_constant,4.07115099887133,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281388,,,train,hesrt,samples/GSE267904/GSM8281388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281389,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4104,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.094265730366453,platform_constant,4.094265730366453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281389,,,train,hesrt,samples/GSE267904/GSM8281389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8281390,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4050,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.098691971774496,platform_constant,4.098691971774496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281390,,,train,hesrt,samples/GSE267904/GSM8281390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281391,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4166,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.069575883406268,platform_constant,4.069575883406268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281391,,,train,hesrt,samples/GSE267904/GSM8281391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281392,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3831,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9941703975375105,platform_constant,3.9941703975375105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281392,,,train,hesrt,samples/GSE267904/GSM8281392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8281393,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4444,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.006204793980877,platform_constant,4.006204793980877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281393,,,train,hesrt,samples/GSE267904/GSM8281393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281394,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3881,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.033026602886546,platform_constant,4.033026602886546,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281394,,,train,hesrt,samples/GSE267904/GSM8281394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281395,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3931,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.031603548868118,platform_constant,4.031603548868118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281395,,,train,hesrt,samples/GSE267904/GSM8281395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8281396,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4479,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Control,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.030262280128959,platform_constant,4.030262280128959,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281396,,,train,hesrt,samples/GSE267904/GSM8281396,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.29}",disease_status;life_stage,low_confidence_annotation
GSM8281397,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3514,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Control,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.0352884163574,platform_constant,4.0352884163574,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281397,,,train,hesrt,samples/GSE267904/GSM8281397,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM8281398,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4378,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Control,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.031770093011953,platform_constant,4.031770093011953,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281398,,,train,hesrt,samples/GSE267904/GSM8281398,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8281399,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4108,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.041571145277497,platform_constant,4.041571145277497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281399,,,train,hesrt,samples/GSE267904/GSM8281399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM8281400,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4197,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.138325579224917,platform_constant,4.138325579224917,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281400,,,train,hesrt,samples/GSE267904/GSM8281400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8281401,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4117,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.063183713379932,platform_constant,4.063183713379932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281401,,,train,hesrt,samples/GSE267904/GSM8281401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8281402,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3046,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.0571522889538505,platform_constant,4.0571522889538505,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281402,,,train,hesrt,samples/GSE267904/GSM8281402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8281403,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3496,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.06001999496172,platform_constant,4.06001999496172,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281403,,,train,hesrt,samples/GSE267904/GSM8281403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM8281404,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4326,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.014680844062496,platform_constant,4.014680844062496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281404,,,train,hesrt,samples/GSE267904/GSM8281404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.6000000000000001}",,
GSM8281405,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,2957,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.1300987039365005,platform_constant,4.1300987039365005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281405,,,train,hesrt,samples/GSE267904/GSM8281405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM8281406,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3643,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.124000999160059,platform_constant,4.124000999160059,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281406,,,train,hesrt,samples/GSE267904/GSM8281406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM8281407,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,4136,Mapping spatially resolved transcriptomes in human and mouse pulmonary fibrosis,GSE267904,GSE267904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,Bleomycin,luna,not stated,8 weeks + 5 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.079094342828535,platform_constant,4.079094342828535,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38951642;41501078,,GSM8281407,,,train,hesrt,samples/GSE267904/GSM8281407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM8282531,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4886,Spatial transcriptome profile of EGFR-TKI resistant non-small cell lung cancer,GSE267960,GSE267960,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005233;MONDO:0004970,luna,Lung cancer,Osimertinib resistant,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.70150567926141,platform_constant,6.70150567926141,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40843133,,GSM8282531,,,train,hesrt,samples/GSE267960/GSM8282531,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8282532,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4518,Spatial transcriptome profile of EGFR-TKI resistant non-small cell lung cancer,GSE267960,GSE267960,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005233;MONDO:0004970,luna,Lung cancer,Osimertinib resistant,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.831860356729648,platform_constant,4.831860356729648,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40843133,,GSM8282532,,,train,hesrt,samples/GSE267960/GSM8282532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8283897,head and neck,disease,head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4048,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000033,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.202588970146706,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283897,,,train,sda-all,samples/GSE268014/GSM8283897,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283898,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4096,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.136999964749101,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283898,,,train,sda-all,samples/GSE268014/GSM8283898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283899,head and neck,disease,head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3333,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000033,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.110902711251165,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283899,,,train,sda-all,samples/GSE268014/GSM8283899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283900,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4128,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.224056325718585,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283900,,,train,sda-all,samples/GSE268014/GSM8283900,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283901,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3606,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.359943033394903,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283901,,,train,sda-all,samples/GSE268014/GSM8283901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283902,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2685,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.051652192352865,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283902,,,train,sda-all,samples/GSE268014/GSM8283902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283903,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2978,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.141943666607662,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283903,,,train,sda-all,samples/GSE268014/GSM8283903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283904,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4908,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.350514188432381,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283904,,,train,sda-all,samples/GSE268014/GSM8283904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283905,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4054,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.331721753687592,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283905,,,train,sda-all,samples/GSE268014/GSM8283905,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283906,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3416,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.492171207803419,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283906,,,train,sda-all,samples/GSE268014/GSM8283906,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283907,head and neck,disease,head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3371,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000033,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.526127910334503,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283907,,,train,sda-all,samples/GSE268014/GSM8283907,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283908,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3137,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.24839878333888,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283908,,,train,sda-all,samples/GSE268014/GSM8283908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283909,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3676,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.201423305768077,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283909,,,train,sda-all,samples/GSE268014/GSM8283909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283910,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4541,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.361009552284944,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283910,,,train,sda-all,samples/GSE268014/GSM8283910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283911,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2263,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.336324878158438,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283911,,,train,sda-all,samples/GSE268014/GSM8283911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283912,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4423,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.386677992451901,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283912,,,train,sda-all,samples/GSE268014/GSM8283912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283913,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3632,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.0692674143063545,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283913,,,train,sda-all,samples/GSE268014/GSM8283913,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283914,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3440,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.4937800136787205,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283914,,,train,sda-all,samples/GSE268014/GSM8283914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283915,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3467,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.15493491430915,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283915,,,train,sda-all,samples/GSE268014/GSM8283915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283916,head and neck,disease,head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1057,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000033,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36634,counts,um,1.0,verified,4.487668094598339,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283916,,,train,sda-all,samples/GSE268014/GSM8283916,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283917,head and neck,disease,head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3050,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.4381567412979885,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283917,,,train,sda-all,samples/GSE268014/GSM8283917,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283918,head and neck,disease,head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1351,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.593705512672028,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283918,,,train,sda-all,samples/GSE268014/GSM8283918,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283919,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3213,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,5.133714446309122,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283919,,,train,sda-all,samples/GSE268014/GSM8283919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283920,head and neck,disease,head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3816,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.33283413782567,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283920,,,train,sda-all,samples/GSE268014/GSM8283920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283921,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2882,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.320122703561482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8283921,,,train,sda-all,samples/GSE268014/GSM8283921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8348695,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,533,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,7.29043321628233,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM8348695,,,train,sda-all,samples/GSE268014/GSM8348695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM9701483,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,169359,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium_hd,,,bin,18085,counts,um,1.0,verified,4.037573106425636,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM9701483,,,train,sda-all,samples/GSE268014/GSM9701483,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9701484,head and neck,disease,head and neck squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,166335,Spatial transcriptomic analysis of tumor heterogeneity in HPV+ and HPV- Head and Neck Squamous Cell Carcinoma,GSE268014,GSE268014,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,Head and neck mucosal squamous cell carcinoma,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium_hd,,,bin,18085,counts,um,1.0,verified,3.350706343751767,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42601456,,GSM9701484,,,train,sda-all,samples/GSE268014/GSM9701484,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8283927,lung,disease,squamous cell lung carcinoma;pneumonia,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2104,Spatial transcriptome analysis of lung squamous cell carcinoma arising from interstitial pneumonia provides insights into tumor heterogeneity.,GSE268015,GSE268015,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005097;MONDO:0005249,luna,squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.352029578887781,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39756106,,GSM8283927,,,train,sda-all,samples/GSE268015/GSM8283927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8283929,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23270,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283929,,,train,sda-all,samples/GSE268018/GSM8283929,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.93}",,
GSM8283930,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,22307,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283930,,,train,sda-all,samples/GSE268018/GSM8283930,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM8283931,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,27014,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283931,,,train,sda-all,samples/GSE268018/GSM8283931,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8283932,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23434,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283932,,,train,sda-all,samples/GSE268018/GSM8283932,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM8283933,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,21564,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283933,,,train,sda-all,samples/GSE268018/GSM8283933,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM8283934,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,21406,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283934,,,train,sda-all,samples/GSE268018/GSM8283934,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.92}",,
GSM8283935,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23629,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283935,,,train,sda-all,samples/GSE268018/GSM8283935,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.91}",,
GSM8283936,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,26506,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283936,,,train,sda-all,samples/GSE268018/GSM8283936,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.91}",,
GSM8283937,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,22951,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283937,,,train,sda-all,samples/GSE268018/GSM8283937,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.88}",,
GSM8283938,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,20831,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283938,,,train,sda-all,samples/GSE268018/GSM8283938,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM8283939,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23079,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283939,,,train,sda-all,samples/GSE268018/GSM8283939,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8283940,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,26583,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283940,,,train,sda-all,samples/GSE268018/GSM8283940,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8283941,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,21410,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283941,,,train,sda-all,samples/GSE268018/GSM8283941,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8283942,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23047,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283942,,,train,sda-all,samples/GSE268018/GSM8283942,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8283943,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23314,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283943,,,train,sda-all,samples/GSE268018/GSM8283943,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8283944,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,20757,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283944,,,train,sda-all,samples/GSE268018/GSM8283944,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8283945,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,21638,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283945,,,train,sda-all,samples/GSE268018/GSM8283945,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.93}",,
GSM8283946,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,21701,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283946,,,train,sda-all,samples/GSE268018/GSM8283946,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM8283947,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,25108,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283947,,,train,sda-all,samples/GSE268018/GSM8283947,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM8283948,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23583,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283948,,,train,sda-all,samples/GSE268018/GSM8283948,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM8283949,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23329,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283949,,,train,sda-all,samples/GSE268018/GSM8283949,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM8283950,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,21671,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283950,,,train,sda-all,samples/GSE268018/GSM8283950,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8283951,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23516,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283951,,,train,sda-all,samples/GSE268018/GSM8283951,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8283952,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23027,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283952,,,train,sda-all,samples/GSE268018/GSM8283952,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8283953,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23304,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283953,,,train,sda-all,samples/GSE268018/GSM8283953,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM8283954,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,21648,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283954,,,train,sda-all,samples/GSE268018/GSM8283954,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM8283955,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,22456,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283955,,,train,sda-all,samples/GSE268018/GSM8283955,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8283956,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,22092,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283956,,,train,sda-all,samples/GSE268018/GSM8283956,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8283957,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,19032,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283957,,,train,sda-all,samples/GSE268018/GSM8283957,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM8283958,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,21649,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283958,,,train,sda-all,samples/GSE268018/GSM8283958,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM8283959,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,23603,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283959,,,train,sda-all,samples/GSE268018/GSM8283959,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM8283960,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,22599,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283960,,,train,sda-all,samples/GSE268018/GSM8283960,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.98, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM8283961,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,21013,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283961,,,train,sda-all,samples/GSE268018/GSM8283961,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 0.98, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM8283962,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,20376,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283962,,,train,sda-all,samples/GSE268018/GSM8283962,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.79}",disease_status,low_confidence_annotation
GSM8283963,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,21417,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283963,,,train,sda-all,samples/GSE268018/GSM8283963,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM8283964,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,20967,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283964,,,train,sda-all,samples/GSE268018/GSM8283964,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM8283965,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,22477,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283965,,,train,sda-all,samples/GSE268018/GSM8283965,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8283966,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,1934,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k),GSE268018,GSE268018,10090,Mus musculus,10090,Plasmodium berghei ANKA,False,False,GEO organism field,"Plasmodium berghei ANKA
Mus musculus",Mus musculus,luna,UBERON:0002107,liver,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,22202,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39160174,,GSM8283966,,,train,sda-all,samples/GSE268018/GSM8283966,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8284978,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,659,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.179591922332745,platform_constant,4.179591922332745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284978,,,train,hesrt,samples/GSE268049/GSM8284978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284979,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,490,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.179591922332745,platform_constant,4.179591922332745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284979,,,train,hesrt,samples/GSE268049/GSM8284979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8284980,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,661,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.179591922332725,platform_constant,4.179591922332725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284980,,,train,hesrt,samples/GSE268049/GSM8284980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8284981,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,509,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.179591922332745,platform_constant,4.179591922332745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284981,,,train,hesrt,samples/GSE268049/GSM8284981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8284982,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,748,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.138218356474405,platform_constant,4.138218356474405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284982,,,train,hesrt,samples/GSE268049/GSM8284982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284983,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,427,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.138218356474405,platform_constant,4.138218356474405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284983,,,train,hesrt,samples/GSE268049/GSM8284983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284984,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,967,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.138218356474405,platform_constant,4.138218356474405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284984,,,train,hesrt,samples/GSE268049/GSM8284984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284985,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,278,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.138218356474405,platform_constant,4.138218356474405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284985,,,train,hesrt,samples/GSE268049/GSM8284985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8284986,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,731,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.138218356474405,platform_constant,4.138218356474405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284986,,,train,hesrt,samples/GSE268049/GSM8284986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8284987,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,804,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.137373822107152,platform_constant,4.137373822107152,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284987,,,train,hesrt,samples/GSE268049/GSM8284987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284988,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,315,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.137373822107152,platform_constant,4.137373822107152,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284988,,,train,hesrt,samples/GSE268049/GSM8284988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8284989,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,605,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.027121283976648,platform_constant,4.027121283976648,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284989,,,train,hesrt,samples/GSE268049/GSM8284989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8284990,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,636,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.055246865356935,platform_constant,4.055246865356935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284990,,,train,hesrt,samples/GSE268049/GSM8284990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284991,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,537,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.055246865356935,platform_constant,4.055246865356935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284991,,,train,hesrt,samples/GSE268049/GSM8284991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8284992,lung,disease,lung neoplasm,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1157,The effect of exposure to neighborhood violence on GR signaling in lung tumors [Spatial Transcriptomics],GSE268049,GSE268049,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tumor,MONDO:0021117,luna,lung adenocarcinoma,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37733,counts,pixel,4.055246865356935,platform_constant,4.055246865356935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38912926,,GSM8284992,,,train,hesrt,samples/GSE268049/GSM8284992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8285399,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2902,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (VISIUM),GSE268068,GSE268068,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,infected and control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,60646,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39160174,10.1038/s41564-022-01104-0,GSM8285399,,,train,hesrt,samples/GSE268068/GSM8285399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8285400,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2693,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (VISIUM),GSE268068,GSE268068,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,infected and control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,60646,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39160174,10.1038/s41564-022-01104-0,GSM8285400,,,train,hesrt,samples/GSE268068/GSM8285400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8285401,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2999,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (VISIUM),GSE268068,GSE268068,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,infected and control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,60646,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39160174,10.1038/s41564-022-01104-0,GSM8285401,,,train,hesrt,samples/GSE268068/GSM8285401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8285402,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2676,Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (VISIUM),GSE268068,GSE268068,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,infected and control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,60646,counts,pixel,4.141824546650327,platform_constant,4.141824546650327,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39160174,10.1038/s41564-022-01104-0,GSM8285402,,,train,hesrt,samples/GSE268068/GSM8285402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289548,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3446,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.0384562901986,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289548,,,train,sda-all,samples/GSE268312/GSM8289548,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM8289549,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3080,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.037811307901734,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289549,,,train,sda-all,samples/GSE268312/GSM8289549,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289550,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3152,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.0240193794868615,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289550,,,train,sda-all,samples/GSE268312/GSM8289550,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8289551,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2907,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.022676160445223,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289551,,,train,sda-all,samples/GSE268312/GSM8289551,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8289552,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2991,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.986661333911779,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289552,,,train,sda-all,samples/GSE268312/GSM8289552,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289553,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2563,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.92133822598847,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289553,,,train,sda-all,samples/GSE268312/GSM8289553,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289554,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3461,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.09295384059742,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289554,,,train,sda-all,samples/GSE268312/GSM8289554,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289555,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3670,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.0944936743951414,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289555,,,train,sda-all,samples/GSE268312/GSM8289555,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289556,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4043,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.880142847860696,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289556,,,train,sda-all,samples/GSE268312/GSM8289556,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8289557,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3973,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.01898030954403,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289557,,,train,sda-all,samples/GSE268312/GSM8289557,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8289558,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3137,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.110725302303756,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289558,,,train,sda-all,samples/GSE268312/GSM8289558,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289559,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2839,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.11203517045289,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289559,,,train,sda-all,samples/GSE268312/GSM8289559,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8289560,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2789,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9274236364735726,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289560,,,train,sda-all,samples/GSE268312/GSM8289560,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289561,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3633,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9616194607097874,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289561,,,train,sda-all,samples/GSE268312/GSM8289561,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289562,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2695,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9160169941909313,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289562,,,train,sda-all,samples/GSE268312/GSM8289562,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289563,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3516,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9165007623954353,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289563,,,train,sda-all,samples/GSE268312/GSM8289563,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289564,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3261,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.916405626523529,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289564,,,train,sda-all,samples/GSE268312/GSM8289564,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8289565,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3364,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.915008513292004,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289565,,,train,sda-all,samples/GSE268312/GSM8289565,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8289566,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3515,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9995996217750003,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289566,,,train,sda-all,samples/GSE268312/GSM8289566,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8289567,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3641,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,True,True,GEO organism field,Homo sapiens/Mus musculus xenograft,,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9753775841130916,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289567,,,train,sda-all,samples/GSE268312/GSM8289567,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8289568,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),4126,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.92916736123975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289568,,,train,sda-all,samples/GSE268312/GSM8289568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8289569,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),3510,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.97596015379836,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8289569,,,train,sda-all,samples/GSE268312/GSM8289569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8764276,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3511,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.913264070524145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764276,,,train,sda-all,samples/GSE268312/GSM8764276,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8764277,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3291,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9156806735119645,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764277,,,train,sda-all,samples/GSE268312/GSM8764277,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8764278,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4181,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9039653352658843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764278,,,train,sda-all,samples/GSE268312/GSM8764278,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8764279,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3845,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.91900502829734,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764279,,,train,sda-all,samples/GSE268312/GSM8764279,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8764280,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3329,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9004454034411076,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764280,,,train,sda-all,samples/GSE268312/GSM8764280,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8764281,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2509,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9032682091849704,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764281,,,train,sda-all,samples/GSE268312/GSM8764281,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8764282,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3287,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.902184198336741,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764282,,,train,sda-all,samples/GSE268312/GSM8764282,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8764283,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3770,Spatial transcriptomics analysis of a panel of PDX models of GBM,GSE268312,GSE268312,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0000955,Brain,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,3.9002792301916815,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40836081,,GSM8764283,,,train,sda-all,samples/GSE268312/GSM8764283,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8291069,liver,disease,metastatic breast cancer in the liver;metastatic malignant neoplasm in the liver,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2848,snPATHO-seq: unlocking the FFPE archives for single nucleus RNA profiling [Visium],GSE268427,GSE268427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Breast cancer liver metastasis,MONDO:1060295;MONDO:1060297,luna,breast cancer,Luminal liver metastasis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.6493369596450738,platform_constant,0.6493369596450738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414943,10.1101/2023.12.07.570700,GSM8291069,,,test,hesrt,samples/GSE268427/GSM8291069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8291070,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4955,snPATHO-seq: unlocking the FFPE archives for single nucleus RNA profiling [Visium],GSE268427,GSE268427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Primary human breast cancer,MONDO:0007254,luna,breast cancer,HER2 amplified primary breast cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.6454837769292928,platform_constant,0.6454837769292928,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414943,10.1101/2023.12.07.570700,GSM8291070,,,test,hesrt,samples/GSE268427/GSM8291070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8291071,liver,disease,metastatic breast cancer in the liver;metastatic malignant neoplasm in the liver;triple-negative breast carcinoma,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,snPATHO-seq: unlocking the FFPE archives for single nucleus RNA profiling [Visium],GSE268427,GSE268427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Breast cancer liver metastasis,MONDO:1060295;MONDO:1060297;MONDO:0005494,luna,breast cancer,TNBC liver metastasis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.6454837769292928,platform_constant,0.6454837769292928,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39414943,10.1101/2023.12.07.570700,GSM8291071,,,test,hesrt,samples/GSE268427/GSM8291071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8291962,spinal cord,disease,,spinal cord,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,24113,Senescent-like microglia limit remyelination through the senescence associated secretory phenotype,GSE268492,GSE268492,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,Spinal Cord,,luna,,LPC focal demyelination,age rule: age with unit,adult,3 months,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,40055369,,GSM8291962,,,train,sda-all,samples/GSE268492/GSM8291962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8291963,spinal cord,disease,,spinal cord,primary tissue,Mus musculus,house mouse,aged,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,10999,Senescent-like microglia limit remyelination through the senescence associated secretory phenotype,GSE268492,GSE268492,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,Spinal Cord,,luna,,LPC focal demyelination,age rule: age with unit,aged,18 months,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40055369,,GSM8291963,,,train,sda-all,samples/GSE268492/GSM8291963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8292463,ovary,disease,classic galactosemia,ovary,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2828,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],GSE268523,GSE268523,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0009258,luna,classic galactosemia,CG,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,CG-835cd744f002,cross_gse_redeposit,GSM9241518,train,hesrt,samples/GSE268523/GSM8292463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8292464,ovary,disease,classic galactosemia,ovary,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2000,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],GSE268523,GSE268523,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0009258,luna,classic galactosemia,CG,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,CG-125efab9f9b2,cross_gse_redeposit,GSM9241519,train,hesrt,samples/GSE268523/GSM8292464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8292465,ovary,disease,classic galactosemia,ovary,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1225,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],GSE268523,GSE268523,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0009258,luna,classic galactosemia,CG,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,CG-2cf57dbd8a98,cross_gse_redeposit,GSM9241520,train,hesrt,samples/GSE268523/GSM8292465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8292466,ovary,disease,sarcoma,ovary,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,946,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],GSE268523,GSE268523,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0005089,luna,Ewing sarcoma,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,GSM8292466,,,train,hesrt,samples/GSE268523/GSM8292466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.27, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8292467,ovary,normal,,ovary,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,5067,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],GSE268523,GSE268523,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,,luna,Dock9 deficiency,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714368,platform_constant,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,GSM8292467,,,train,hesrt,samples/GSE268523/GSM8292467,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8292468,ovary,normal,,ovary,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1739,Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics],GSE268523,GSE268523,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,,luna,medulloblastoma,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39440457,,CG-01e98b2b16a7,cross_gse_redeposit,GSM9241522,train,hesrt,samples/GSE268523/GSM8292468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8294434,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,577,Spatial transcriptomics of 3 H3.3K27M pDMG samples,GSE268577,GSE268577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Midline,MONDO:0021042,luna,Diffusion Midline Glioma (DMG),H3.3 K27M,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.030263032311737,platform_constant,4.030263032311737,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39373720,10.7554/elife.91313.3,GSM8294434,,,train,hesrt,samples/GSE268577/GSM8294434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8294435,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,856,Spatial transcriptomics of 3 H3.3K27M pDMG samples,GSE268577,GSE268577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Midline,MONDO:0021042,luna,Diffusion Midline Glioma (DMG),H3.3 K27M,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.032895034268122,platform_constant,4.032895034268122,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39373720,10.7554/elife.91313.3,GSM8294435,,,train,hesrt,samples/GSE268577/GSM8294435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8294436,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,217,Spatial transcriptomics of 3 H3.3K27M pDMG samples,GSE268577,GSE268577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Midline,MONDO:0021042,luna,Diffusion Midline Glioma (DMG),H3.3 K27M,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.936842092665259,platform_constant,3.936842092665259,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39373720,10.7554/elife.91313.3,GSM8294436,,,train,hesrt,samples/GSE268577/GSM8294436,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8299015,spinal cord,disease,spinal cord injury;autonomic dysreflexia,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3746,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,GSE268779,GSE268779,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797;MONDO:0043975,mondo_predicate (Luna: perturbation),,"Spinal cord injury, subjected to autonomic dysreflexia",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.943705260611831,platform_constant,3.943705260611831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299015,,,train,hesrt,samples/GSE268779/GSM8299015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8299016,spinal cord,disease,spinal cord injury;autonomic dysreflexia,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4243,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,GSE268779,GSE268779,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797;MONDO:0043975,mondo_predicate (Luna: perturbation),,"Spinal cord injury, subjected to autonomic dysreflexia",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.8869514222785115,platform_constant,3.8869514222785115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299016,,,train,hesrt,samples/GSE268779/GSM8299016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8299017,spinal cord,disease,spinal cord injury;autonomic dysreflexia,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3842,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,GSE268779,GSE268779,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797;MONDO:0043975,luna,,"Spinal cord injury, subjected to autonomic dysreflexia",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.965889055538643,platform_constant,3.965889055538643,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299017,,,train,hesrt,samples/GSE268779/GSM8299017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8299018,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3985,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,GSE268779,GSE268779,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,luna,,Spinal cord injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9503181338774565,platform_constant,3.9503181338774565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299018,,,train,hesrt,samples/GSE268779/GSM8299018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8299019,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3291,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,GSE268779,GSE268779,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,mondo_predicate (Luna: perturbation),,Spinal cord injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9640658728068594,platform_constant,3.9640658728068594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299019,,,train,hesrt,samples/GSE268779/GSM8299019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8299020,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3578,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,GSE268779,GSE268779,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797,mondo_predicate (Luna: perturbation),,Spinal cord injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9814246036086542,platform_constant,3.9814246036086542,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299020,,,train,hesrt,samples/GSE268779/GSM8299020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8299021,spinal cord,disease,spinal cord injury;autonomic dysreflexia,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2448,Identification of perturbation-responsive regions and genes in comparative spatial transcriptomics atlases,GSE268779,GSE268779,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0043797;MONDO:0043975,mondo_predicate (Luna: perturbation),,"Spinal cord injury, subjected to autonomic dysreflexia",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9749923646678087,platform_constant,3.9749923646678087,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8299021,,,train,hesrt,samples/GSE268779/GSM8299021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8301085,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3025,Implant renal injury-responsive cells to supplement erythropoietin and protect kidney [Spatial Transcriptomics],GSE268847,GSE268847,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,55450,counts,um,1.0,verified,4.04941225826671,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41179707,,GSM8301085,,,train,sda-all,samples/GSE268847/GSM8301085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8301086,kidney,perturbation,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2823,Implant renal injury-responsive cells to supplement erythropoietin and protect kidney [Spatial Transcriptomics],GSE268847,GSE268847,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",,luna,UBERON:0002113,kidney,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,61692,counts,um,1.0,verified,4.043487882863929,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41179707,,GSM8301086,,,train,sda-all,samples/GSE268847/GSM8301086,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.47000000000000003, ""uberon"": 0.96, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8305455,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),912,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),GSE269043,GSE269043+GSE269045,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.194609930399362,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305455,,,train,sda-all,samples/GSE269043/GSM8305455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305456,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),938,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),GSE269043,GSE269043+GSE269045,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.273557750382263,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305456,,,train,sda-all,samples/GSE269043/GSM8305456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305457,lung,disease,acute myeloid leukemia,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1279,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),GSE269043,GSE269043+GSE269045,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0018874,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.143947553900407,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305457,,,train,sda-all,samples/GSE269043/GSM8305457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.16, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305458,lung,disease,acute myeloid leukemia,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),581,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),GSE269043,GSE269043+GSE269045,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0018874,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.19249997934899,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305458,,,train,sda-all,samples/GSE269043/GSM8305458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305459,lung,disease,acute myeloid leukemia,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),474,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),GSE269043,GSE269043+GSE269045,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0018874,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.178049636293641,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305459,,,train,sda-all,samples/GSE269043/GSM8305459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305460,lung,disease,acute myeloid leukemia,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1839,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),GSE269043,GSE269043+GSE269045,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0018874,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.108255471479863,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305460,,,train,sda-all,samples/GSE269043/GSM8305460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.13, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305461,lung,disease,acute myeloid leukemia,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2208,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),GSE269043,GSE269043+GSE269045,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0018874,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.296015375569938,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305461,,,train,sda-all,samples/GSE269043/GSM8305461,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305462,lung,disease,acute myeloid leukemia,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1794,Dissecting tissue-specific microenvironments in acute myeloid leukemia (Spatial),GSE269043,GSE269043+GSE269045,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0018874,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.202606006506583,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8305462,,,train,sda-all,samples/GSE269043/GSM8305462,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305629,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2579,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750625881116635,platform_constant,4.2750625881116635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305629,,,train,hesrt,samples/GSE269054/GSM8305629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8305633,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2757,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,,luna,myocardial infarction,30 min I/R surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.4725977970036235,platform_constant,4.4725977970036235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305633,,,train,hesrt,samples/GSE269054/GSM8305633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305634,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2148,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750625881116635,platform_constant,4.2750625881116635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305634,,,train,hesrt,samples/GSE269054/GSM8305634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8305635,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2215,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.275062588111642,platform_constant,4.275062588111642,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305635,,,train,hesrt,samples/GSE269054/GSM8305635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305639,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1052,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.244223770924469,platform_constant,4.244223770924469,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305639,,,train,hesrt,samples/GSE269054/GSM8305639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8305640,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2526,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.18690910740551,platform_constant,4.18690910740551,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305640,,,train,hesrt,samples/GSE269054/GSM8305640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305641,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2530,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.1869091074055005,platform_constant,4.1869091074055005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305641,,,train,hesrt,samples/GSE269054/GSM8305641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305642,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2280,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.4725977970036235,platform_constant,4.4725977970036235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305642,,,train,hesrt,samples/GSE269054/GSM8305642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8305643,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2435,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.275090852894863,platform_constant,4.275090852894863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305643,,,train,hesrt,samples/GSE269054/GSM8305643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305644,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2045,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,,luna,myocardial infarction,30 min I/R surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.7673042609998415,platform_constant,4.7673042609998415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305644,,,train,hesrt,samples/GSE269054/GSM8305644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8305645,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2409,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.122810398176053,platform_constant,4.122810398176053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305645,,,train,hesrt,samples/GSE269054/GSM8305645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305646,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2808,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.122782940871393,platform_constant,4.122782940871393,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305646,,,train,hesrt,samples/GSE269054/GSM8305646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305647,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2516,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery + antibody treatment,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750908528948415,platform_constant,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305647,,,train,hesrt,samples/GSE269054/GSM8305647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305648,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2721,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.275090852894863,platform_constant,4.275090852894863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305648,,,train,hesrt,samples/GSE269054/GSM8305648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305649,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2150,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750908528948415,platform_constant,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305649,,,train,hesrt,samples/GSE269054/GSM8305649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8305650,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1936,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.1778919676385655,platform_constant,4.1778919676385655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305650,,,train,hesrt,samples/GSE269054/GSM8305650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305651,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1784,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750908528948415,platform_constant,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305651,,,train,hesrt,samples/GSE269054/GSM8305651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305652,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2135,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,,"WT, MI surgery",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2750908528948415,platform_constant,4.2750908528948415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305652,,,train,hesrt,samples/GSE269054/GSM8305652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305653,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2392,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.4001730111066655,platform_constant,4.4001730111066655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305653,,,train,hesrt,samples/GSE269054/GSM8305653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.98, ""life_stage"": 0.93}",,
GSM8305655,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2375,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.417647432954104,platform_constant,4.417647432954104,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305655,,,train,hesrt,samples/GSE269054/GSM8305655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305656,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2466,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.122782940871393,platform_constant,4.122782940871393,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305656,,,train,hesrt,samples/GSE269054/GSM8305656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8305657,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2341,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.137884507628592,platform_constant,4.137884507628592,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305657,,,train,hesrt,samples/GSE269054/GSM8305657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305659,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2511,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.366954928291586,platform_constant,4.366954928291586,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305659,,,train,hesrt,samples/GSE269054/GSM8305659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305660,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2349,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.122810398176053,platform_constant,4.122810398176053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305660,,,train,hesrt,samples/GSE269054/GSM8305660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8305661,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2088,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.470069310669543,platform_constant,4.470069310669543,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305661,,,train,hesrt,samples/GSE269054/GSM8305661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8305662,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2222,Spatially clustered type I interferon responses at injury borderzones,GSE269054,GSE269054,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,cardiac,MONDO:0005068,luna,myocardial infarction,MI surgery,age rule: age with unit,not stated,10–12 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.122810398176053,platform_constant,4.122810398176053,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39198639,,GSM8305662,,,train,hesrt,samples/GSE269054/GSM8305662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8305769,kidney,disease,ureteral obstruction,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,790,scRNA-Seq reveals anti-fibrotic mechanisms of TRPC6 inhibition [Spatial Transcriptomics],GSE269063,GSE269063,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0003329,luna,renal fibrosis,"unilateral ureteral obstruction (UUO), SH045 treatment",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.8111356219028325,platform_constant,4.8111356219028325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8305769,,,train,hesrt,samples/GSE269063/GSM8305769,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8305770,kidney,disease,ureteral obstruction,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,570,scRNA-Seq reveals anti-fibrotic mechanisms of TRPC6 inhibition [Spatial Transcriptomics],GSE269063,GSE269063,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,MONDO:0003329,luna,renal fibrosis,"unilateral ureteral obstruction (UUO), Vehicle treatment",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.85086271377426,platform_constant,4.85086271377426,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8305770,,,train,hesrt,samples/GSE269063/GSM8305770,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8312343,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1321,Meningeal-derived retinoic acid regulates neurogenesis via suppression of Notch and Sox2 [Spatial Transcriptomics],GSE269283,GSE269283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Foxc1 WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40310723,,GSM8312343,,,train,hesrt,samples/GSE269283/GSM8312343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8312344,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1620,Meningeal-derived retinoic acid regulates neurogenesis via suppression of Notch and Sox2 [Spatial Transcriptomics],GSE269283,GSE269283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Foxc1 WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40310723,,GSM8312344,,,train,hesrt,samples/GSE269283/GSM8312344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8312345,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2155,Meningeal-derived retinoic acid regulates neurogenesis via suppression of Notch and Sox2 [Spatial Transcriptomics],GSE269283,GSE269283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Foxc1 KO,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40310723,,GSM8312345,,,train,hesrt,samples/GSE269283/GSM8312345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8312346,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1523,Meningeal-derived retinoic acid regulates neurogenesis via suppression of Notch and Sox2 [Spatial Transcriptomics],GSE269283,GSE269283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Foxc1 KO,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.118779114954516,platform_constant,4.118779114954516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40310723,,GSM8312346,,,train,hesrt,samples/GSE269283/GSM8312346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8313236,uterus,disease,endometrial carcinoma,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,446,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0002447,mondo_predicate (Luna: perturbation),,Normal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.187233610495957,platform_constant,4.187233610495957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313236,,,train,hesrt,samples/GSE269332/GSM8313236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 0.62}",disease_status,low_confidence_annotation
GSM8313237,uterus,disease,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,207,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,,luna,,Normal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.118140943577113,platform_constant,4.118140943577113,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313237,,,train,hesrt,samples/GSE269332/GSM8313237,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8313238,uterus,disease,endometrial carcinoma,uterus,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,343,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0002447,luna,,Dysplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.118140943577113,platform_constant,4.118140943577113,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313238,,,train,hesrt,samples/GSE269332/GSM8313238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8313239,uterus,disease,endometrial carcinoma,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,296,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0002447,luna,,Normal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.118140943577097,platform_constant,4.118140943577097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313239,,,train,hesrt,samples/GSE269332/GSM8313239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.99, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM8313240,uterus,disease,endometrial carcinoma,uterus,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,408,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0002447,luna,,Dysplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.118140943577099,platform_constant,4.118140943577099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313240,,,train,hesrt,samples/GSE269332/GSM8313240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8313241,uterus,disease,carcinoma;endometrial cancer,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,213,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0004993;MONDO:0011962,luna,,Pre-dysplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.080769095695792,platform_constant,4.080769095695792,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313241,,,train,hesrt,samples/GSE269332/GSM8313241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8313242,uterus,disease,uterine carcinoma;endometrial cancer,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,310,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0005213;MONDO:0011962,luna,,Pre-dysplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.086538333834155,platform_constant,4.086538333834155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313242,,,train,hesrt,samples/GSE269332/GSM8313242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM8313243,uterus,disease,uterine carcinoma;endometrial cancer,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,206,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0005213;MONDO:0011962,luna,,Pre-dysplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.152013710001935,platform_constant,4.152013710001935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313243,,,train,hesrt,samples/GSE269332/GSM8313243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8313244,uterus,disease,endometrial carcinoma,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,257,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0002447,luna,,Pre-dysplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.134615198557692,platform_constant,4.134615198557692,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313244,,,train,hesrt,samples/GSE269332/GSM8313244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8313245,uterus,disease,endometrial carcinoma,uterus,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,417,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0002447,luna,,Dysplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.126923294824628,platform_constant,4.126923294824628,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313245,,,train,hesrt,samples/GSE269332/GSM8313245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8313246,uterus,disease,endometrial carcinoma,uterus,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,405,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0002447,luna,,Dysplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.11346168270007,platform_constant,4.11346168270007,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313246,,,train,hesrt,samples/GSE269332/GSM8313246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8313247,uterus,disease,endometrial carcinoma,uterus,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,331,Cell state dynamics during early stages of serous endometrial carcinoma,GSE269332,GSE269332,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,MONDO:0002447,luna,,Dysplastic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,50560,counts,pixel,4.107692255113847,platform_constant,4.107692255113847,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40923619,10.1002/path.6470,GSM8313247,,,train,hesrt,samples/GSE269332/GSM8313247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8313612,airway,disease,asthma,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,62732,Xenium In Situ Gene Expression of healthy and asthmatic lung endobronchial biopsies,GSE269354,GSE269354,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung endobronchial biopsies,MONDO:0004979,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,40399607,,GSM8313612,,,train,sda-all,samples/GSE269354/GSM8313612,sda-tissue-disease-2.5,"{""organ"": 0.74, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 0.44, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8313613,airway,disease,asthma,respiratory airway,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,43572,Xenium In Situ Gene Expression of healthy and asthmatic lung endobronchial biopsies,GSE269354,GSE269354,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001005,Lung endobronchial biopsies,MONDO:0004979,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,40399607,,GSM8313613,,,train,sda-all,samples/GSE269354/GSM8313613,sda-tissue-disease-2.5,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.7000000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8314106,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,934,Spatial characterization of the transcriptome of the adult healthy and mutant FUS mouse spinal cords [Spatial transcriptomics],GSE269377,GSE269377,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,mouse spinal cord,,luna,,non-transgenic and FUS R521H,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.2398074639364216,platform_constant,0.4999894999977516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41430470,,GSM8314106,,,train,hesrt,samples/GSE269377/GSM8314106,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 0.43}",disease_status;life_stage,low_confidence_annotation
GSM8314107,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1043,Spatial characterization of the transcriptome of the adult healthy and mutant FUS mouse spinal cords [Spatial transcriptomics],GSE269377,GSE269377,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,mouse spinal cord,,luna,,non-transgenic and FUS R521H,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.2398074639364216,platform_constant,0.4999894999977516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41430470,,GSM8314107,,,train,hesrt,samples/GSE269377/GSM8314107,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 0.54}",disease_status;life_stage,low_confidence_annotation
GSM8314108,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,792,Spatial characterization of the transcriptome of the adult healthy and mutant FUS mouse spinal cords [Spatial transcriptomics],GSE269377,GSE269377,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,mouse spinal cord,,luna,,non-transgenic and FUS R521H,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.2398074639364216,platform_constant,0.4999894999977516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41430470,,GSM8314108,,,train,hesrt,samples/GSE269377/GSM8314108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 0.62}",disease_status,low_confidence_annotation
GSM8314109,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,928,Spatial characterization of the transcriptome of the adult healthy and mutant FUS mouse spinal cords [Spatial transcriptomics],GSE269377,GSE269377,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,mouse spinal cord,,luna,,non-transgenic and FUS R521H,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.2398074639364216,platform_constant,0.4999894999977516,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41430470,,GSM8314109,,,train,hesrt,samples/GSE269377/GSM8314109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 0.54}",disease_status;life_stage,low_confidence_annotation
GSM8968967,brain,disease,toxic encephalopathy,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,302297,The CXCL16/CXCR6 axis is linked to immune effector cell-associated neurotoxicity in chimeric antigen receptor (CAR) T cell therapy,GSE269379,GSE269379,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005527,mondo_predicate (Luna: perturbation),,anti-CD19 CAR T-cell therapy,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,um,1.0,verified,4.708497817302379,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40588764,,GSM8968967,,,train,sda-all,samples/GSE269379/GSM8968967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8321863,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,3602,Multi-omics Analysis Revealing the Impact of Excessive Maternal Folate Supplementation on Offspring Brain Development [spatial transcriptome],GSE269543,GSE269543,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,median folate,age rule: postnatal day,not stated,21 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.243684086780494,platform_constant,4.243684086780494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,CG-fb6b97b170cd,cross_gse_redeposit,GSM8741265,train,hesrt,samples/GSE269543/GSM8321863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8321864,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,3316,Multi-omics Analysis Revealing the Impact of Excessive Maternal Folate Supplementation on Offspring Brain Development [spatial transcriptome],GSE269543,GSE269543,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,median folate,age rule: postnatal day,not stated,21 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.244210577925419,platform_constant,4.244210577925419,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,CG-9bec1c12cdf6,cross_gse_redeposit,GSM8741266,train,hesrt,samples/GSE269543/GSM8321864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8321865,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,3202,Multi-omics Analysis Revealing the Impact of Excessive Maternal Folate Supplementation on Offspring Brain Development [spatial transcriptome],GSE269543,GSE269543,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,high folate,age rule: postnatal day,not stated,21 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.243684086780514,platform_constant,4.243684086780514,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321865,,,train,hesrt,samples/GSE269543/GSM8321865,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8321866,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,3350,Multi-omics Analysis Revealing the Impact of Excessive Maternal Folate Supplementation on Offspring Brain Development [spatial transcriptome],GSE269543,GSE269543,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,high folate,age rule: postnatal day,not stated,21 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.37789481043452,platform_constant,4.37789481043452,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321866,,,train,hesrt,samples/GSE269543/GSM8321866,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8321875,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2208,Specific oncogenic drivers differently shaped the composition and functional diversity of immune cells in the microenvironment of experimental gliomas,GSE269545,GSE269545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,1x PBS injection,age rule: age with unit,not stated,10 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.903846054298088,platform_constant,3.903846054298088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321875,,,train,hesrt,samples/GSE269545/GSM8321875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8321876,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2673,Specific oncogenic drivers differently shaped the composition and functional diversity of immune cells in the microenvironment of experimental gliomas,GSE269545,GSE269545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,1x PBS injection,age rule: age with unit,not stated,10 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.8935388810577543,platform_constant,3.8935388810577543,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321876,,,train,hesrt,samples/GSE269545/GSM8321876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8321877,brain,disease,glioma,brain,tumour tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2327,Specific oncogenic drivers differently shaped the composition and functional diversity of immune cells in the microenvironment of experimental gliomas,GSE269545,GSE269545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0021042,luna,glioma,"1x 80,000 GL261 cells injection",age rule: age with unit,not stated,10 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9661318724347616,platform_constant,3.9661318724347616,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321877,,,train,hesrt,samples/GSE269545/GSM8321877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8321878,brain,disease,glioma,brain,tumour tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2769,Specific oncogenic drivers differently shaped the composition and functional diversity of immune cells in the microenvironment of experimental gliomas,GSE269545,GSE269545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0021042,luna,glioma,"1x 80,000 GL261 cells injection",age rule: age with unit,not stated,10 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.050515534656392,platform_constant,4.050515534656392,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8321878,,,train,hesrt,samples/GSE269545/GSM8321878,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8322399,oral cavity,normal,,gingiva,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,126,Gingival spatial analysis reveals geographic immunological variation in a microbiota-dependent and -independent manner [Spatial Transcriptomics],GSE269576,GSE269576,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001828,Gingival mucosa,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9432237423488132,platform_constant,3.9432237423488132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627243,,GSM8322399,,,train,hesrt,samples/GSE269576/GSM8322399,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8322400,oral cavity,normal,,gingiva,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,128,Gingival spatial analysis reveals geographic immunological variation in a microbiota-dependent and -independent manner [Spatial Transcriptomics],GSE269576,GSE269576,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001828,Gingival mucosa,,luna,,GF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9178841007178096,platform_constant,3.9178841007178096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627243,,GSM8322400,,,train,hesrt,samples/GSE269576/GSM8322400,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM8322401,oral cavity,normal,,gingiva,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,139,Gingival spatial analysis reveals geographic immunological variation in a microbiota-dependent and -independent manner [Spatial Transcriptomics],GSE269576,GSE269576,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001828,Gingival mucosa,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.8970702941635476,platform_constant,3.8970702941635476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627243,,GSM8322401,,,train,hesrt,samples/GSE269576/GSM8322401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8322402,oral cavity,normal,,gingiva,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,144,Gingival spatial analysis reveals geographic immunological variation in a microbiota-dependent and -independent manner [Spatial Transcriptomics],GSE269576,GSE269576,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001828,Gingival mucosa,,luna,,SPF,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9927598365655967,platform_constant,3.9927598365655967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627243,,GSM8322402,,,train,hesrt,samples/GSE269576/GSM8322402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323030,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,392559,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 18,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323030,,,train,sda-all,samples/GSE269617/GSM8323030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM8323031,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,377651,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 18,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323031,,,train,sda-all,samples/GSE269617/GSM8323031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 0.63}",,
GSM8323032,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,447449,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 18,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323032,,,train,sda-all,samples/GSE269617/GSM8323032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM8323033,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,405842,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 18,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323033,,,train,sda-all,samples/GSE269617/GSM8323033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM8323034,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,445350,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 18,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323034,,,train,sda-all,samples/GSE269617/GSM8323034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM8323035,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,332172,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323035,,,train,sda-all,samples/GSE269617/GSM8323035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8323036,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,235509,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323036,,,train,sda-all,samples/GSE269617/GSM8323036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8323037,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,212162,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323037,,,train,sda-all,samples/GSE269617/GSM8323037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8323038,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,201299,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323038,,,train,sda-all,samples/GSE269617/GSM8323038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.84, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8323039,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,191883,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323039,,,train,sda-all,samples/GSE269617/GSM8323039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8323040,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,252334,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323040,,,train,sda-all,samples/GSE269617/GSM8323040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323041,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,437323,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323041,,,train,sda-all,samples/GSE269617/GSM8323041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323042,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,271192,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323042,,,train,sda-all,samples/GSE269617/GSM8323042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.92, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8323043,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,289578,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323043,,,train,sda-all,samples/GSE269617/GSM8323043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8323044,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,282747,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Control (PBS treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323044,,,train,sda-all,samples/GSE269617/GSM8323044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.88, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8323045,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,404930,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (MIA treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323045,,,train,sda-all,samples/GSE269617/GSM8323045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323046,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,393954,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (MIA treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323046,,,train,sda-all,samples/GSE269617/GSM8323046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8323047,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,378211,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (MIA treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323047,,,train,sda-all,samples/GSE269617/GSM8323047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.9500000000000001, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8323048,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,317677,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (MIA treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323048,,,train,sda-all,samples/GSE269617/GSM8323048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323049,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,356514,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (MIA treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323049,,,train,sda-all,samples/GSE269617/GSM8323049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.93, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8323050,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,460960,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (MIA treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323050,,,train,sda-all,samples/GSE269617/GSM8323050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8323051,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,541746,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (MIA treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323051,,,train,sda-all,samples/GSE269617/GSM8323051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323052,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,304263,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (MIA treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323052,,,train,sda-all,samples/GSE269617/GSM8323052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8323053,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,351740,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (MIA treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323053,,,train,sda-all,samples/GSE269617/GSM8323053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM8323054,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,362238,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (MIA treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323054,,,train,sda-all,samples/GSE269617/GSM8323054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8323055,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,239190,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (Abx treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323055,,,train,sda-all,samples/GSE269617/GSM8323055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8323056,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,274235,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (Abx treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323056,,,train,sda-all,samples/GSE269617/GSM8323056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8323057,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,260441,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (Abx treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323057,,,train,sda-all,samples/GSE269617/GSM8323057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8323058,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,254538,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (Abx treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323058,,,train,sda-all,samples/GSE269617/GSM8323058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8323059,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,90244,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (Abx treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,500,unknown,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,near_duplicate_observations,VERIFIED,,,,,,GSM8323059,,,train,sda-all,samples/GSE269617/GSM8323059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM8323060,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,77918,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (Abx treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,500,unknown,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,near_duplicate_observations,VERIFIED,,,,,,GSM8323060,,,train,sda-all,samples/GSE269617/GSM8323060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323061,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,320109,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (Abx treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323061,,,train,sda-all,samples/GSE269617/GSM8323061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323062,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,368523,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (Abx treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323062,,,train,sda-all,samples/GSE269617/GSM8323062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8323063,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,91271,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (Abx treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,500,unknown,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,near_duplicate_observations,VERIFIED,,,,,,GSM8323063,,,train,sda-all,samples/GSE269617/GSM8323063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8323064,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,277689,The Maternal Gut-Immune Axis Programs the Neuroimmune Landscape of the Developing Brain,GSE269617,GSE269617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Whole embryonic brain,,luna,,Condition (Abx treated),age rule: embryonic day,embryonic,Embryonic day 14,extracted field,female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM8323064,,,train,sda-all,samples/GSE269617/GSM8323064,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8324905,lymph node,disease,,lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1001,Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics],GSE269695,GSE269695,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Primary lymphoid tissue,,luna,,Original biopsy,luna,not stated,,not stated,,GSE269695:patient 03,patient 03,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.026521732285349,platform_constant,4.026521732285349,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39653701,,GSM8324905,,,val,hesrt,samples/GSE269695/GSM8324905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8324906,unknown,disease,diffuse large B-cell lymphoma,lymphoid tissue,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,349,Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics],GSE269695,GSE269695,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001744,Primary lymphoid tissue,MONDO:0018905,luna,DLBCL,Original biopsy,luna,not stated,,not stated,,GSE269695:patient 08,patient 08,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.948260899453538,platform_constant,3.948260899453538,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39653701,,GSM8324906,,,val,hesrt,samples/GSE269695/GSM8324906,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8324907,other,disease,diffuse large B-cell lymphoma,lymphoid tissue,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,378,Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics],GSE269695,GSE269695,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001744,Lymphoid tissue explants,MONDO:0018905,luna,DLBCL,Control,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,GSE269695:patient 08,patient 08,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.038830716445008,platform_constant,4.038830716445008,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39653701,,GSM8324907,,,val,hesrt,samples/GSE269695/GSM8324907,sda-tissue-disease-2.3,"{""organ"": 0.45, ""sample_kind"": 0.49, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.98}",organ;sample_kind,low_confidence_annotation
GSM8324908,unknown,disease,diffuse large B-cell lymphoma,lymphoid tissue,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,135,Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics],GSE269695,GSE269695,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001744,Lymphoid tissue explants,MONDO:0018905,luna,DLBCL,Ibrutinib,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,GSE269695:patient 08,patient 08,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.024990096144494,platform_constant,4.024990096144494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39653701,,GSM8324908,,,val,hesrt,samples/GSE269695/GSM8324908,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8324909,unknown,disease,diffuse large B-cell lymphoma,lymphoid tissue,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,191,Patient-derived lymphomoids preserve the tumor architecture and allow testing response to therapies in lymphoma [Spatial Transcriptomics],GSE269695,GSE269695,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001744,Lymphoid tissue explants,MONDO:0018905,luna,DLBCL,Idelalisib,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,GSE269695:patient 08,patient 08,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9765219305601986,platform_constant,3.9765219305601986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39653701,,GSM8324909,,,val,hesrt,samples/GSE269695/GSM8324909,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.6000000000000001, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8325615,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,111858,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.49999226086059223,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325615,,,val,sda-all,samples/GSE269719/GSM8325615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8325616,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,84419,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.49998085532516495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325616,,,val,sda-all,samples/GSE269719/GSM8325616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8325617,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,99904,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.4999837892006602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325617,,,val,sda-all,samples/GSE269719/GSM8325617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8325618,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,114493,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.5000250501002004,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325618,,,val,sda-all,samples/GSE269719/GSM8325618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8325619,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,108869,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.49998452331820054,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325619,,,val,sda-all,samples/GSE269719/GSM8325619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8325620,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,112097,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.5000064486174165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325620,,,val,sda-all,samples/GSE269719/GSM8325620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8325621,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,101456,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.4999961268332989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325621,,,val,sda-all,samples/GSE269719/GSM8325621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8325622,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,96671,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.5000265330188679,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325622,,,val,sda-all,samples/GSE269719/GSM8325622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8325623,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,152532,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.5000250501002004,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325623,,,val,sda-all,samples/GSE269719/GSM8325623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8325624,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,148234,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.5000265330188679,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325624,,,val,sda-all,samples/GSE269719/GSM8325624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8325625,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,152574,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.4999767873723305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325625,,,val,sda-all,samples/GSE269719/GSM8325625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM8325626,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,126332,Multimodal spatial transcriptomic characterization of mouse kidney injury and repair [Xenium],GSE269719,GSE269719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_300g,xenium-1.4.0.7,cell,541,counts,um,1.0,verified,0.5000141884222474,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40813851,,GSM8325626,,,val,sda-all,samples/GSE269719/GSM8325626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8329284,bone marrow,perturbation,,bone marrow,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,1254,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,Bone marrow,,luna,,control,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.390954935983405,platform_constant,4.390954935983405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329284,,,train,hesrt,samples/GSE269875/GSM8329284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8329285,bone marrow,perturbation,,bone marrow,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,1157,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,Bone marrow,,luna,,control,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.522384718818935,platform_constant,4.522384718818935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329285,,,train,hesrt,samples/GSE269875/GSM8329285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8329286,bone marrow,disease,"plasma cell myeloma;plasma cell myeloma, non-human animal",bone marrow,tumour tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,574,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,Bone marrow,MONDO:0009693;MONDO:1013329,luna,Multiple Myeloma,Multiple Myeloma,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.608058668043672,platform_constant,4.608058668043672,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329286,,,train,hesrt,samples/GSE269875/GSM8329286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329287,bone marrow,disease,"plasma cell myeloma;plasma cell myeloma, non-human animal",bone marrow,tumour tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,772,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,Bone marrow,MONDO:0009693;MONDO:1013329,luna,Multiple Myeloma,Multiple Myeloma,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.339447378189332,platform_constant,4.339447378189332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329287,,,train,hesrt,samples/GSE269875/GSM8329287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329288,bone marrow,disease,"plasma cell myeloma;plasma cell myeloma, non-human animal",bone marrow,tumour tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,920,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,Bone marrow,MONDO:0009693;MONDO:1013329,luna,Multiple Myeloma,Multiple Myeloma,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.277387044174472,platform_constant,4.277387044174472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329288,,,train,hesrt,samples/GSE269875/GSM8329288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329289,bone marrow,disease,"plasma cell myeloma;plasma cell myeloma, non-human animal",bone marrow,tumour tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,531,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,Bone marrow,MONDO:0009693;MONDO:1013329,luna,Multiple Myeloma,Multiple Myeloma,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.298241424380833,platform_constant,4.298241424380833,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329289,,,train,hesrt,samples/GSE269875/GSM8329289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329290,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,2055,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,control,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329290,,,train,hesrt,samples/GSE269875/GSM8329290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8329291,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,822,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,control,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329291,,,train,hesrt,samples/GSE269875/GSM8329291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8329292,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1254,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,control,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329292,,,train,hesrt,samples/GSE269875/GSM8329292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8329293,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,373,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,Multiple Myeloma,Multiple Myeloma,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329293,,,train,hesrt,samples/GSE269875/GSM8329293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8329294,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,876,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,Multiple Myeloma,Multiple Myeloma,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329294,,,train,hesrt,samples/GSE269875/GSM8329294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8329295,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,977,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,Multiple Myeloma,Multiple Myeloma,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329295,,,train,hesrt,samples/GSE269875/GSM8329295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329296,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1126,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,Multiple Myeloma,Multiple Myeloma,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329296,,,train,hesrt,samples/GSE269875/GSM8329296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8329297,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,2993,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,Multiple Myeloma,Multiple Myeloma,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329297,,,train,hesrt,samples/GSE269875/GSM8329297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8329298,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,875,Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma,GSE269875,GSE269875,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,Multiple Myeloma,Multiple Myeloma,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41954292,,GSM8329298,,,train,hesrt,samples/GSE269875/GSM8329298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8330060,brain,disease,Alzheimer disease,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,93793,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,MONDO:0004975,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,43620,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330060,,,train,sda-all,samples/GSE269906/GSM8330060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330061,brain,disease,Alzheimer disease,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,80183,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,MONDO:0004975,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,44092,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330061,,,train,sda-all,samples/GSE269906/GSM8330061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8330062,brain,disease,Alzheimer disease,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,88683,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,MONDO:0004975,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,39808,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330062,,,train,sda-all,samples/GSE269906/GSM8330062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330063,brain,disease,Alzheimer disease,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,98835,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,MONDO:0004975,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,46330,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330063,,,train,sda-all,samples/GSE269906/GSM8330063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330064,brain,disease,Alzheimer disease,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,72490,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,MONDO:0004975,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,42758,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,39779708,,GSM8330064,,,train,sda-all,samples/GSE269906/GSM8330064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330065,brain,normal,,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,80404,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,44135,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330065,,,train,sda-all,samples/GSE269906/GSM8330065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330066,brain,normal,,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,86345,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,44083,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330066,,,train,sda-all,samples/GSE269906/GSM8330066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330067,brain,disease,Alzheimer disease,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,84904,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,MONDO:0004975,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,41697,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330067,,,train,sda-all,samples/GSE269906/GSM8330067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330068,brain,normal,,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,80655,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,41162,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330068,,,train,sda-all,samples/GSE269906/GSM8330068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330069,brain,normal,,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,68943,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,42696,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330069,,,train,sda-all,samples/GSE269906/GSM8330069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330070,brain,normal,,Brodmann (1909) area 10,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,82056,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0013541,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,44011,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330070,,,train,sda-all,samples/GSE269906/GSM8330070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8330071,brain,normal,,prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,49729,Stereo-seq on human prefrontal cortex from six AD and six normal samples,GSE269906,GSE269906,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000451,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,42355,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39779708,,GSM8330071,,,train,sda-all,samples/GSE269906/GSM8330071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8341551,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3047,Tau accumulation induces microglial state alterations in Alzheimer’s disease model mice,GSE270389,GSE270389,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,uninjected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.357633515253452,platform_constant,4.357633515253452,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592224,,GSM8341551,,,train,hesrt,samples/GSE270389/GSM8341551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8341552,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3040,Tau accumulation induces microglial state alterations in Alzheimer’s disease model mice,GSE270389,GSE270389,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,uninjected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.358015139616476,platform_constant,4.358015139616476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592224,,GSM8341552,,,train,hesrt,samples/GSE270389/GSM8341552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8341553,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2610,Tau accumulation induces microglial state alterations in Alzheimer’s disease model mice,GSE270389,GSE270389,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,injected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.358015139616476,platform_constant,4.358015139616476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592224,,GSM8341553,,,train,hesrt,samples/GSE270389/GSM8341553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8341554,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2581,Tau accumulation induces microglial state alterations in Alzheimer’s disease model mice,GSE270389,GSE270389,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,injected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.7942748633595915,platform_constant,4.7942748633595915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592224,,GSM8341554,,,train,hesrt,samples/GSE270389/GSM8341554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349861,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1453,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 01,Donor 01,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.5079234171845375,platform_constant,4.5079234171845375,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349861,,,train,hesrt,samples/GSE270678/GSM8349861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349862,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1390,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 01,Donor 01,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.526502847127605,platform_constant,4.526502847127605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349862,,,train,hesrt,samples/GSE270678/GSM8349862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349863,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1618,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 02,Donor 02,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.461166078631851,platform_constant,4.461166078631851,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349863,,,train,hesrt,samples/GSE270678/GSM8349863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349864,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1319,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 02,Donor 02,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.459764431630373,platform_constant,4.459764431630373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349864,,,train,hesrt,samples/GSE270678/GSM8349864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8349865,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2303,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 03,Donor 03,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.463317823093222,platform_constant,4.463317823093222,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349865,,,train,hesrt,samples/GSE270678/GSM8349865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349866,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2229,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 03,Donor 03,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.461399914110597,platform_constant,4.461399914110597,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349866,,,train,hesrt,samples/GSE270678/GSM8349866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8349867,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1793,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 07,Donor 07,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,6.241666711762731,platform_constant,6.241666711762731,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349867,,,train,hesrt,samples/GSE270678/GSM8349867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8349868,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1190,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 09,Donor 09,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.618538561166521,platform_constant,4.618538561166521,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349868,,,train,hesrt,samples/GSE270678/GSM8349868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349869,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1943,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 09,Donor 09,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.61853856116652,platform_constant,4.61853856116652,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349869,,,train,hesrt,samples/GSE270678/GSM8349869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8349870,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2516,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 10,Donor 10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.329603662547855,platform_constant,4.329603662547855,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349870,,,train,hesrt,samples/GSE270678/GSM8349870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8349871,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1787,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 11,Donor 11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.513020802414612,platform_constant,4.513020802414612,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349871,,,train,hesrt,samples/GSE270678/GSM8349871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8349872,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1792,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 11,Donor 11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.513020802414603,platform_constant,4.513020802414603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349872,,,train,hesrt,samples/GSE270678/GSM8349872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8349873,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1899,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 12,Donor 12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.9427776607327925,platform_constant,4.9427776607327925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349873,,,train,hesrt,samples/GSE270678/GSM8349873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8349874,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1447,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 12,Donor 12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.9427776607327925,platform_constant,4.9427776607327925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349874,,,train,hesrt,samples/GSE270678/GSM8349874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8349875,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2218,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 15,Donor 15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.9343526125989206,platform_constant,4.9343526125989206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349875,,,train,hesrt,samples/GSE270678/GSM8349875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349876,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1810,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 15,Donor 15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.9343526125989206,platform_constant,4.9343526125989206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349876,,,train,hesrt,samples/GSE270678/GSM8349876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349877,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1359,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 16,Donor 16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.815934116742177,platform_constant,4.815934116742177,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349877,,,train,hesrt,samples/GSE270678/GSM8349877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349878,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1520,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 16,Donor 16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.789617536869264,platform_constant,4.789617536869264,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349878,,,train,hesrt,samples/GSE270678/GSM8349878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8349879,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3166,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 18,Donor 18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.4450895109334025,platform_constant,4.4450895109334025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349879,,,train,hesrt,samples/GSE270678/GSM8349879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8349880,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1067,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 20,Donor 20,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.5234971223743665,platform_constant,4.5234971223743665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349880,,,train,hesrt,samples/GSE270678/GSM8349880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349881,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3037,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 20,Donor 20,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.5234971223743665,platform_constant,4.5234971223743665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349881,,,train,hesrt,samples/GSE270678/GSM8349881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8349882,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1949,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 21,Donor 21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.513008999491088,platform_constant,4.513008999491088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349882,,,train,hesrt,samples/GSE270678/GSM8349882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349883,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,794,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 21,Donor 21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.513053178625199,platform_constant,4.513053178625199,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349883,,,train,hesrt,samples/GSE270678/GSM8349883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349884,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1593,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 22,Donor 22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.30666676709813,platform_constant,4.30666676709813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349884,,,train,hesrt,samples/GSE270678/GSM8349884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8349885,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1784,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 23,Donor 23,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.638105780062523,platform_constant,4.638105780062523,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349885,,,train,hesrt,samples/GSE270678/GSM8349885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349886,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3557,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 24,Donor 24,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.216367252596353,platform_constant,4.216367252596353,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349886,,,train,hesrt,samples/GSE270678/GSM8349886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349887,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2156,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 24,Donor 24,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.445854105003441,platform_constant,4.445854105003441,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349887,,,train,hesrt,samples/GSE270678/GSM8349887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349888,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3455,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 26,Donor 26,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.857948425945679,platform_constant,4.857948425945679,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349888,,,train,hesrt,samples/GSE270678/GSM8349888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349889,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2834,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 26,Donor 26,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.698068051856702,platform_constant,4.698068051856702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349889,,,train,hesrt,samples/GSE270678/GSM8349889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349890,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2282,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 26,Donor 26,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.770591243121117,platform_constant,4.770591243121117,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349890,,,train,hesrt,samples/GSE270678/GSM8349890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8349891,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1369,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 27,Donor 27,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.505000115395577,platform_constant,4.505000115395577,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349891,,,train,hesrt,samples/GSE270678/GSM8349891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349892,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2047,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 27,Donor 27,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.3427775891275315,platform_constant,4.3427775891275315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349892,,,train,hesrt,samples/GSE270678/GSM8349892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349893,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2044,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 28,Donor 28,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.271110808716454,platform_constant,4.271110808716454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349893,,,train,hesrt,samples/GSE270678/GSM8349893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349894,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1762,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 01,Donor 01,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.559444392307212,platform_constant,4.559444392307212,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349894,,,train,hesrt,samples/GSE270678/GSM8349894,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM8349895,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1666,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 01,Donor 01,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.414999926931739,platform_constant,4.414999926931739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349895,,,train,hesrt,samples/GSE270678/GSM8349895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349896,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3478,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 03,Donor 03,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.541111261512718,platform_constant,4.541111261512718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349896,,,train,hesrt,samples/GSE270678/GSM8349896,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349897,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3294,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 03,Donor 03,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.58333319010414,platform_constant,4.58333319010414,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349897,,,train,hesrt,samples/GSE270678/GSM8349897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349898,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2082,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 07,Donor 07,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,6.241666711762709,platform_constant,6.241666711762709,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349898,,,train,hesrt,samples/GSE270678/GSM8349898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349899,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1560,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 10,Donor 10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.354444494401423,platform_constant,5.354444494401423,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349899,,,train,hesrt,samples/GSE270678/GSM8349899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349900,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1806,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 10,Donor 10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.354444494401423,platform_constant,5.354444494401423,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349900,,,train,hesrt,samples/GSE270678/GSM8349900,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.87}",,
GSM8349901,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2388,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 11,Donor 11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.505000115395566,platform_constant,4.505000115395566,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349901,,,train,hesrt,samples/GSE270678/GSM8349901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349902,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2385,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 11,Donor 11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.721666718132844,platform_constant,4.721666718132844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349902,,,train,hesrt,samples/GSE270678/GSM8349902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349903,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1428,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 11,Donor 11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.505000115395577,platform_constant,4.505000115395577,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349903,,,train,hesrt,samples/GSE270678/GSM8349903,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM8349904,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1342,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 11,Donor 11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.721666718132831,platform_constant,4.721666718132831,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349904,,,train,hesrt,samples/GSE270678/GSM8349904,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.84}",,
GSM8349905,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2675,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 15,Donor 15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.091666545739547,platform_constant,5.091666545739547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349905,,,train,hesrt,samples/GSE270678/GSM8349905,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349906,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1845,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 15,Donor 15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.091666545739547,platform_constant,5.091666545739547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349906,,,train,hesrt,samples/GSE270678/GSM8349906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8349907,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,613,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 16,Donor 16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.8116668138796275,platform_constant,4.8116668138796275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349907,,,train,hesrt,samples/GSE270678/GSM8349907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8349908,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,650,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 16,Donor 16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.77555548258507,platform_constant,4.77555548258507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349908,,,train,hesrt,samples/GSE270678/GSM8349908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349909,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2182,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 16,Donor 16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.8116668138796275,platform_constant,4.8116668138796275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349909,,,train,hesrt,samples/GSE270678/GSM8349909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM8349910,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1962,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 16,Donor 16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.77555548258507,platform_constant,4.77555548258507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349910,,,train,hesrt,samples/GSE270678/GSM8349910,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8349911,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3072,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 18,Donor 18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.721666718132844,platform_constant,4.721666718132844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349911,,,train,hesrt,samples/GSE270678/GSM8349911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349912,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2140,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 18,Donor 18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.672405056236847,platform_constant,4.672405056236847,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349912,,,train,hesrt,samples/GSE270678/GSM8349912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8349913,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,984,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 20,Donor 20,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.537777904039106,platform_constant,5.537777904039106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349913,,,train,hesrt,samples/GSE270678/GSM8349913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8349914,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2883,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 20,Donor 20,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.537777904039106,platform_constant,5.537777904039106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349914,,,train,hesrt,samples/GSE270678/GSM8349914,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM8349915,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1655,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 21,Donor 21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.7983334351539675,platform_constant,4.7983334351539675,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349915,,,train,hesrt,samples/GSE270678/GSM8349915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM8349916,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1924,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 21,Donor 21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.711111243022193,platform_constant,4.711111243022193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349916,,,train,hesrt,samples/GSE270678/GSM8349916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM8349917,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1291,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 21,Donor 21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.798333435153994,platform_constant,4.798333435153994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349917,,,train,hesrt,samples/GSE270678/GSM8349917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8349918,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1395,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 21,Donor 21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.711111243022193,platform_constant,4.711111243022193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349918,,,train,hesrt,samples/GSE270678/GSM8349918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349919,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1338,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 22,Donor 22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.654636926778667,platform_constant,4.654636926778667,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349919,,,train,hesrt,samples/GSE270678/GSM8349919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8349920,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2005,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 23,Donor 23,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.617435479847994,platform_constant,4.617435479847994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349920,,,train,hesrt,samples/GSE270678/GSM8349920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM8349921,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3960,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 24,Donor 24,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.834444496559747,platform_constant,4.834444496559747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349921,,,train,hesrt,samples/GSE270678/GSM8349921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM8349922,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2759,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 24,Donor 24,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.3427775891275315,platform_constant,4.3427775891275315,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349922,,,train,hesrt,samples/GSE270678/GSM8349922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349923,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3706,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 26,Donor 26,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.8741436810769185,platform_constant,4.8741436810769185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349923,,,train,hesrt,samples/GSE270678/GSM8349923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8349924,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3505,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 26,Donor 26,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.529720414242332,platform_constant,4.529720414242332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349924,,,train,hesrt,samples/GSE270678/GSM8349924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8349925,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2812,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 26,Donor 26,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.620270435391185,platform_constant,4.620270435391185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349925,,,train,hesrt,samples/GSE270678/GSM8349925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349926,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2534,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 27,Donor 27,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.746373628925057,platform_constant,4.746373628925057,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349926,,,train,hesrt,samples/GSE270678/GSM8349926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8349927,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3367,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 27,Donor 27,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.325000052981256,platform_constant,4.325000052981256,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349927,,,train,hesrt,samples/GSE270678/GSM8349927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8349928,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4105,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 27,Donor 27,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.600222821297506,platform_constant,4.600222821297506,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349928,,,train,hesrt,samples/GSE270678/GSM8349928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8349929,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2212,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Edge,luna,not stated,,not stated,,GSE270678:Donor 27,Donor 27,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.69304373232092,platform_constant,4.69304373232092,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349929,,,train,hesrt,samples/GSE270678/GSM8349929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349930,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1592,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,In-between,luna,not stated,,not stated,,GSE270678:Donor 28,Donor 28,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.474723894149122,platform_constant,4.474723894149122,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349930,,,train,hesrt,samples/GSE270678/GSM8349930,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8349931,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2226,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 30,Donor 30,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.325000052981245,platform_constant,4.325000052981245,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349931,,,train,hesrt,samples/GSE270678/GSM8349931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8349932,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2861,A spatially resolved atlas of gastric cancer characterises a lymphocyte aggregated region [Spatial Transcriptomics],GSE270678,GSE270678,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Gastric cancer tumor,MONDO:0001056,luna,gastric cancer,Core,luna,not stated,,not stated,,GSE270678:Donor 30,Donor 30,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.765555585959783,platform_constant,4.765555585959783,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41593079,10.1038/s41467-026-68612-z,GSM8349932,,,train,hesrt,samples/GSE270678/GSM8349932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8367223,skeletal muscle,normal,,extensor digitorum longus,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),1196,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,GSE271011,GSE271011,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001386,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,,luna,,C57BL/6J,luna,adult,75 days,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.664392717443788,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367223,,,train,sda-all,samples/GSE271011/GSM8367223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.27, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8367224,skeletal muscle,normal,,extensor digitorum longus,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),852,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,GSE271011,GSE271011,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001386,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,,luna,,C57BL/6J,luna,adult,150 days,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.661277560142778,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367224,,,train,sda-all,samples/GSE271011/GSM8367224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.32, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8367225,skeletal muscle,disease,amyotrophic lateral sclerosis,extensor digitorum longus,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),872,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,GSE271011,GSE271011,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001386,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,MONDO:0004976,luna,,SOD1G93A  (B6.Cg-Tg(SOD1 G93A)1Gur/J),luna,juvenile,75 days,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.665033645134912,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367225,,,train,sda-all,samples/GSE271011/GSM8367225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8367226,skeletal muscle,disease,amyotrophic lateral sclerosis,extensor digitorum longus,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),518,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,GSE271011,GSE271011,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001386,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,MONDO:0004976,luna,,SOD1G93A  (B6.Cg-Tg(SOD1 G93A)1Gur/J),luna,adult,150 days,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.664779328415307,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367226,,,train,sda-all,samples/GSE271011/GSM8367226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8367227,skeletal muscle,disease,amyotrophic lateral sclerosis,extensor digitorum longus,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),640,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,GSE271011,GSE271011,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001386,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,MONDO:0004976,luna,,SOD1G93A  (B6.Cg-Tg(SOD1 G93A)1Gur/J),luna,juvenile,75 days,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.675533288169167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367227,,,train,sda-all,samples/GSE271011/GSM8367227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8367228,skeletal muscle,disease,amyotrophic lateral sclerosis,extensor digitorum longus,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,"fluorescence: single channel, grayscale (heuristic)",616,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,GSE271011,GSE271011,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001386,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,MONDO:0004976,luna,,SOD1G93A  (B6.Cg-Tg(SOD1 G93A)1Gur/J),luna,juvenile,75 days,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.665193036058008,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367228,,,train,sda-all,samples/GSE271011/GSM8367228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 0.99}",,
GSM8367229,skeletal muscle,disease,amyotrophic lateral sclerosis,extensor digitorum longus,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,"fluorescence: single channel, grayscale (heuristic)",594,Polyamine Dysregulation Contributes to Muscle Fibers Vulnerability in ALS,GSE271011,GSE271011,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001386,skeletal-muscle- Tibialis Anterior and Extensor Digitorum Longus,MONDO:0004976,luna,,SOD1G93A  (B6.Cg-Tg(SOD1 G93A)1Gur/J),luna,adult,150 days,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.668393205739615,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39932195;42602328,,GSM8367229,,,train,sda-all,samples/GSE271011/GSM8367229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8368271,liver,normal,,liver,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),854,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,fetal liver,,luna,,Wild type,age rule: embryonic day,embryonic,E14.5,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,32589,counts,um,1.0,verified,4.429583071033197,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8368271,,,train,sda-all,samples/GSE271077/GSM8368271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8368272,bone marrow,normal,,leg bone,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E-like (heuristic),1094,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0005893,leg bone,,luna,,Wild type,age rule: postnatal day,neonatal or infant,P8,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,32589,counts,um,1.0,verified,4.426673987262891,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8368272,,,train,sda-all,samples/GSE271077/GSM8368272,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8368273,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1038,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,,luna,,Wild type,luna,adult,Adult,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,32589,counts,um,1.0,verified,4.428467484015576,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8368273,,,train,sda-all,samples/GSE271077/GSM8368273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8407228,bone marrow,normal,,bone marrow,primary tissue,Mus musculus,house mouse,aged,unknown,Visium,Visium,True,H&E-like (heuristic),934,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,leg bone,,luna,,No treatment,luna,aged,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,32589,counts,um,1.0,verified,4.303681791192756,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8407228,,,train,sda-all,samples/GSE271077/GSM8407228,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.58, ""life_stage"": 0.8}",uberon,low_confidence_annotation
GSM8927829,liver,normal,,liver,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),491,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,fetal liver,,luna,,No treatment,luna,embryonic,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,32589,counts,um,1.0,verified,4.430306304725564,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8927829,,,train,sda-all,samples/GSE271077/GSM8927829,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8200000000000001, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8927830,bone marrow,normal,,bone marrow,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),814,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,leg bone,,luna,,EDTA (0.5M) treatment for 5 days,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,32589,counts,um,1.0,verified,3.8450828640302017,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8927830,,,train,sda-all,samples/GSE271077/GSM8927830,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.49, ""life_stage"": 0.46}",disease_status;uberon;life_stage,low_confidence_annotation
GSM9745604,liver,normal,,liver,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),2353,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,fetal liver,,luna,,No treatment,luna,embryonic,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.489653726080569,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745604,,,train,sda-all,samples/GSE271077/GSM9745604,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9745605,liver,normal,,liver,primary tissue,Mus musculus,house mouse,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),806,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,fetal liver,,luna,,No treatment,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,2.233243670779976,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745605,,,train,sda-all,samples/GSE271077/GSM9745605,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9745606,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),2195,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,fetal liver,,luna,,No treatment,luna,embryonic,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.731872304914385,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745606,,,train,sda-all,samples/GSE271077/GSM9745606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.84, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9745607,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),589,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,fetal liver,,luna,,No treatment,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,2.11814985926101,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745607,,,train,sda-all,samples/GSE271077/GSM9745607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.64, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9745608,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1430,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,2.5032242493768666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745608,,,train,sda-all,samples/GSE271077/GSM9745608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9745609,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2009,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.3509299297348063,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745609,,,train,sda-all,samples/GSE271077/GSM9745609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9745610,spleen,perturbation,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1341,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,2.5417282261293583,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745610,,,train,sda-all,samples/GSE271077/GSM9745610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9745611,spleen,perturbation,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1371,Spatial mapping reveals erythroid niches in mice during development and stress,GSE271077,GSE271077,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,2.4673171272000234,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745611,,,train,sda-all,samples/GSE271077/GSM9745611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8370059,other,normal,,,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,6743,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,human midbrain-like organoids,,luna,,WT,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8370059,,,train,sda-all,samples/GSE271118/GSM8370059,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.43, ""life_stage"": 0.99}",organ;uberon,low_confidence_annotation
GSM8370060,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,3289,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001891,human midbrain-like organoids,,luna,,WT,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8370060,,,train,sda-all,samples/GSE271118/GSM8370060,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.54, ""life_stage"": 0.99}",organ;uberon,low_confidence_annotation
GSM8370061,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,3166,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,,luna,,WT,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8370061,,,train,sda-all,samples/GSE271118/GSM8370061,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM8370062,other,normal,,,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,6426,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,human midbrain-like organoids,,luna,,WT,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8370062,,,train,sda-all,samples/GSE271118/GSM8370062,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.39, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8370063,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,13929,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,,luna,,WT,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8370063,,,train,sda-all,samples/GSE271118/GSM8370063,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 0.99}",,
GSM8370064,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,7745,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,,luna,,WT,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8370064,,,train,sda-all,samples/GSE271118/GSM8370064,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.6000000000000001, ""life_stage"": 0.99}",,
GSM8370065,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,8232,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,,luna,,WT,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8370065,,,train,sda-all,samples/GSE271118/GSM8370065,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.7000000000000001, ""life_stage"": 0.99}",,
GSM8370066,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,5031,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001891,human midbrain-like organoids,,luna,,WT,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,near_duplicate_observations;shared_positions,VERIFIED,,,,,,GSM8370066,,,train,sda-all,samples/GSE271118/GSM8370066,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.46, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8370067,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,3368,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,,luna,,WT,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8370067,,,train,sda-all,samples/GSE271118/GSM8370067,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.78, ""life_stage"": 0.97}",,
GSM8370068,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,4311,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,,luna,,WT,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8370068,,,train,sda-all,samples/GSE271118/GSM8370068,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6900000000000001, ""life_stage"": 0.93}",,
GSM8981692,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,6824,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,luna,,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8981692,,,train,sda-all,samples/GSE271118/GSM8981692,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.61, ""life_stage"": 0.99}",organ;disease_status,low_confidence_annotation
GSM8981693,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,2776,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,mondo_predicate (Luna: perturbation),,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8981693,,,train,sda-all,samples/GSE271118/GSM8981693,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8981694,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,2229,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,luna,,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8981694,,,train,sda-all,samples/GSE271118/GSM8981694,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.72, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8981695,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,3845,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,luna,,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8981695,,,train,sda-all,samples/GSE271118/GSM8981695,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8981696,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,6641,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,mondo_predicate (Luna: perturbation),,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8981696,,,train,sda-all,samples/GSE271118/GSM8981696,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM8981697,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,8117,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,luna,,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8981697,,,train,sda-all,samples/GSE271118/GSM8981697,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8981698,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,5852,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,luna,,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8981698,,,train,sda-all,samples/GSE271118/GSM8981698,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.54, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8981699,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,5251,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,luna,,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,near_duplicate_observations;shared_positions,VERIFIED,,,,,,GSM8981699,,,train,sda-all,samples/GSE271118/GSM8981699,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.4, ""life_stage"": 1.0}",organ;disease_status;uberon,low_confidence_annotation
GSM8981700,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,3706,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,luna,,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8981700,,,train,sda-all,samples/GSE271118/GSM8981700,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8981701,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,7892,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,mondo_predicate (Luna: perturbation),,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,shared_positions,VERIFIED,,,,,,GSM8981701,,,train,sda-all,samples/GSE271118/GSM8981701,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.53, ""life_stage"": 1.0}",organ;disease_status;uberon,low_confidence_annotation
GSM8981702,brain,disease,Parkinson disease,midbrain,organoid,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,5075,Single-cell transcriptomics revealed molecular vulnerability in a human midbrain-like organoid model of Parkinson's Disease [MERFISH],GSE271118,GSE271118,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001891,human midbrain-like organoids,MONDO:0005180,luna,,DJ-1 KO,rule: culture or organoid (culture time is not a life stage),not stated,60,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,136,counts,unstated,,unresolved,,,,,units_unstated,near_duplicate_observations;shared_positions,VERIFIED,,,,,,GSM8981702,,,train,sda-all,samples/GSE271118/GSM8981702,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM8370814,liver,normal,,liver,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),3103,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Fetal liver,,luna,,No treatment,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.425783786824677,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370814,,,train,sda-all,samples/GSE271150/GSM8370814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8370815,bone marrow,disease,myelodysplastic syndrome,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3595,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,MONDO:0018881,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.382861470927495,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370815,,,train,sda-all,samples/GSE271150/GSM8370815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370816,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3586,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.397649616032367,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370816,,,train,sda-all,samples/GSE271150/GSM8370816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370817,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1950,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.380084542291267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370817,,,train,sda-all,samples/GSE271150/GSM8370817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370818,bone marrow,disease,myelodysplastic syndrome,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2944,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,MONDO:0018881,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.379195256879274,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370818,,,train,sda-all,samples/GSE271150/GSM8370818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370819,bone marrow,disease,myelodysplastic syndrome,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3067,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,MONDO:0018881,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.380274847428818,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370819,,,train,sda-all,samples/GSE271150/GSM8370819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8370820,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1451,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.386501014841959,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370820,,,train,sda-all,samples/GSE271150/GSM8370820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370821,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2816,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.918504243158633,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370821,,,train,sda-all,samples/GSE271150/GSM8370821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8370822,bone marrow,disease,myelodysplastic syndrome,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3336,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,MONDO:0018881,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.9195368190367805,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370822,,,train,sda-all,samples/GSE271150/GSM8370822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8370823,bone marrow,disease,myelodysplastic syndrome,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1952,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,MONDO:0018881,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.911146702888269,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370823,,,train,sda-all,samples/GSE271150/GSM8370823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8370824,bone marrow,disease,myelodysplastic syndrome,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3523,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,MONDO:0018881,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.915569589516483,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370824,,,train,sda-all,samples/GSE271150/GSM8370824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8370825,bone marrow,disease,myelodysplastic syndrome,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3860,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,MONDO:0018881,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.915488053892097,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370825,,,train,sda-all,samples/GSE271150/GSM8370825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8370826,bone marrow,disease,myelodysplastic syndrome,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2971,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,MONDO:0018881,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,36945,counts,um,1.0,verified,4.919549640307393,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8370826,,,train,sda-all,samples/GSE271150/GSM8370826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8940307,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3382,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow clot,,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,37082,counts,um,1.0,verified,5.132637810025819,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM8940307,,,train,sda-all,samples/GSE271150/GSM8940307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9745612,liver,normal,,liver,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),2155,Spatial mapping reveals erythroid niches in human during development and stress,GSE271150,GSE271150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,fetal liver,,luna,,No treatment,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,17943,counts,um,1.0,verified,4.422394891397117,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42393220,,GSM9745612,,,train,sda-all,samples/GSE271150/GSM9745612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 0.98}",,
GSM8375640,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),4683,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.9779483610087203,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8375640,,,test,sda-all,samples/GSE271370/GSM8375640,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8375641,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),3649,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.921036428580514,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8375641,,,test,sda-all,samples/GSE271370/GSM8375641,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8375642,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (see review notes),4768,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.1913004409291155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8375642,,,test,sda-all,samples/GSE271370/GSM8375642,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8375643,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (see review notes),2204,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Control,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.235897075204899,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8375643,,,test,sda-all,samples/GSE271370/GSM8375643,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8387358,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),4409,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.200465971071704,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387358,,,test,sda-all,samples/GSE271370/GSM8387358,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM8387359,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),3963,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.291432367138355,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387359,,,test,sda-all,samples/GSE271370/GSM8387359,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387360,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),4127,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.211683383825733,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387360,,,test,sda-all,samples/GSE271370/GSM8387360,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387361,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),4816,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.16448769937006,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387361,,,test,sda-all,samples/GSE271370/GSM8387361,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387362,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,undetermined,4213,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.197293301703671,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387362,,,test,sda-all,samples/GSE271370/GSM8387362,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8387363,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,undetermined,4613,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.336667244342068,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387363,,,test,sda-all,samples/GSE271370/GSM8387363,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387364,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (see review notes),3849,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.268687229154004,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387364,,,test,sda-all,samples/GSE271370/GSM8387364,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387365,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (see review notes),4212,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.277671357939148,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387365,,,test,sda-all,samples/GSE271370/GSM8387365,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387366,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (see review notes),4498,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Proliferative DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.151952103388087,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387366,,,test,sda-all,samples/GSE271370/GSM8387366,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387367,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),3717,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Acute DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.8971653273397564,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387367,,,test,sda-all,samples/GSE271370/GSM8387367,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387368,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),3643,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Acute DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.9518118693154496,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387368,,,test,sda-all,samples/GSE271370/GSM8387368,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8387369,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),3264,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Acute DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.9273535251806795,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387369,,,test,sda-all,samples/GSE271370/GSM8387369,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8387370,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4620,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Acute DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.094136098593613,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387370,,,test,sda-all,samples/GSE271370/GSM8387370,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387371,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4619,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Acute DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.207434820821884,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387371,,,test,sda-all,samples/GSE271370/GSM8387371,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8387372,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),4602,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Acute DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.235773512219491,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387372,,,test,sda-all,samples/GSE271370/GSM8387372,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8387373,lung,disease,lung disorder;COVID-19,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),4561,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005275;MONDO:0100096,luna,Acute DAD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.226008892608912,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,reviewer could not judge any sample of GSE271370,,,GSM8387373,,,test,sda-all,samples/GSE271370/GSM8387373,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8387374,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),4542,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Control,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.913108283085134,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387374,,,test,sda-all,samples/GSE271370/GSM8387374,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8387375,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),3517,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Control,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.8981134943626183,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387375,,,test,sda-all,samples/GSE271370/GSM8387375,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8387376,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),4086,Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19,GSE271370,GSE271370,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Control,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.085333504092165,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8387376,,,test,sda-all,samples/GSE271370/GSM8387376,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8376639,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1732,spatialGE is a User-Friendly Web Application that Facilitates Spatial Transcriptomics Data Analysis,GSE271422,GSE271422,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain melanoma metastasis,MONDO:0005105,luna,melanoma metastasis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.996153721050163,platform_constant,4.996153721050163,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39636739,,GSM8376639,,,train,hesrt,samples/GSE271422/GSM8376639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8376640,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1302,spatialGE is a User-Friendly Web Application that Facilitates Spatial Transcriptomics Data Analysis,GSE271422,GSE271422,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain melanoma metastasis,MONDO:0005105,luna,melanoma metastasis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.057692301605761,platform_constant,4.057692301605761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39636739,,GSM8376640,,,train,hesrt,samples/GSE271422/GSM8376640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8376641,brain,disease,melanoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1425,spatialGE is a User-Friendly Web Application that Facilitates Spatial Transcriptomics Data Analysis,GSE271422,GSE271422,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain melanoma metastasis,MONDO:0005105,luna,melanoma metastasis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.007692300478453,platform_constant,4.007692300478453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39636739,,GSM8376641,,,train,hesrt,samples/GSE271422/GSM8376641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8382626,liver,normal,,liver,primary tissue,Mus musculus,house mouse,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,117329,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,GSE271693,GSE271693,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,WT mice embryo E14.5 days fetal liver,,luna,,,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000112099889624,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8382626,,,train,sda-all,samples/GSE271693/GSM8382626,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM8382627,bone marrow,normal,,bone marrow,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,52594,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,GSE271693,GSE271693,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,8 days postnatal WT mice bone marrow,,luna,,,luna,neonatal or infant,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000047006618532,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8382627,,,train,sda-all,samples/GSE271693/GSM8382627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8382628,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,108338,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,GSE271693,GSE271693,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Adult WT mice spleen,,luna,,,luna,adult,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000308641975308,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8382628,,,train,sda-all,samples/GSE271693/GSM8382628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8382629,spleen,perturbation,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,94582,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,GSE271693,GSE271693,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,PHZ treated mice spleen,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000077407369181,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8382629,,,train,sda-all,samples/GSE271693/GSM8382629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8945653,liver,normal,,liver,primary tissue,Mus musculus,house mouse,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,5285,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,GSE271693,GSE271693,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,WT mice embryo E13.5 days fetal liver,,luna,,,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13617,counts,um,1.0,verified,0.4999488543371522,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8945653,,,train,sda-all,samples/GSE271693/GSM8945653,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8945654,bone marrow,normal,,bone marrow,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,143810,High resolution mapping of erythroid niches in mice using subcellular spatial transcriptomics,GSE271693,GSE271693,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,89 weeks old WT mice bone marrow,,luna,,,luna,adult,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13617,counts,um,1.0,verified,0.49999812030075186,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8945654,,,train,sda-all,samples/GSE271693/GSM8945654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.71}",,
GSM8383560,plant,normal,,,primary tissue,Triticum aestivum,bread wheat,not stated,unknown,Stereo-seq,Stereo-seq,False,,159278,A soil-grown wheat root atlas with validated cross-species cluster annotations allows to delineate conserved tissue specific marker genes [Spatial Transcriptomics],GSE271725,GSE271725,4565,Triticum aestivum,4565,,False,False,GEO organism field,Triticum aestivum,,luna,,Root,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,77502,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,39893633,,GSM8383560,,,val,sda-all,samples/GSE271725/GSM8383560,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8383561,plant,normal,,,primary tissue,Triticum aestivum,bread wheat,not stated,unknown,Stereo-seq,Stereo-seq,False,,167120,A soil-grown wheat root atlas with validated cross-species cluster annotations allows to delineate conserved tissue specific marker genes [Spatial Transcriptomics],GSE271725,GSE271725,4565,Triticum aestivum,4565,,False,False,GEO organism field,Triticum aestivum,,luna,,Root,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,96646,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,39893633,,GSM8383561,,,val,sda-all,samples/GSE271725/GSM8383561,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8385442,esophagus,normal,,esophagus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),3228,Lgr5 Marks Stem/Progenitor Cells Contributing to Epithelial and Muscle Development in the Mouse Esophagus,GSE271795,GSE271795,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001043,mouse embryo,,luna,,not treated,age rule: embryonic day,embryonic,E13.5,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.680371432066744,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39164270,,GSM8385442,,,train,sda-all,samples/GSE271795/GSM8385442,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8385443,esophagus,normal,,esophagus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),3593,Lgr5 Marks Stem/Progenitor Cells Contributing to Epithelial and Muscle Development in the Mouse Esophagus,GSE271795,GSE271795,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001043,mouse embryo,,luna,,not treated,age rule: embryonic day,embryonic,E16.5,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.6331995258967344,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39164270,,GSM8385443,,,train,sda-all,samples/GSE271795/GSM8385443,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8385444,esophagus,normal,,esophagus,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,fluorescence: blue (heuristic),366,Lgr5 Marks Stem/Progenitor Cells Contributing to Epithelial and Muscle Development in the Mouse Esophagus,GSE271795,GSE271795,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001043,esophagus,,luna,,not treated,age rule: postnatal day,neonatal or infant,P0,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.949407132378689,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39164270,,GSM8385444,,,train,sda-all,samples/GSE271795/GSM8385444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8385445,esophagus,normal,,esophagus,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,blue bright-field stain (heuristic),271,Lgr5 Marks Stem/Progenitor Cells Contributing to Epithelial and Muscle Development in the Mouse Esophagus,GSE271795,GSE271795,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001043,esophagus,,luna,,not treated,age rule: postnatal day,neonatal or infant,P0,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.080174294689524,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39164270,,GSM8385445,,,train,sda-all,samples/GSE271795/GSM8385445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8386295,liver,normal,,liver,primary tissue,Homo sapiens,human,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,224957,High resolution mapping of erythroid niches in human using subcellular spatial transcriptomics,GSE271824,GSE271824,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,16 weeks GA fetal liver,,luna,,,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_94g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999885247406591,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8386295,,,train,sda-all,samples/GSE271824/GSM8386295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8386296,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,40939,High resolution mapping of erythroid niches in human using subcellular spatial transcriptomics,GSE271824,GSE271824,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,normal case bone marrow,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_94g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999827705031013,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8386296,,,train,sda-all,samples/GSE271824/GSM8386296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8386297,bone marrow,disease,myelodysplastic syndrome,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38492,High resolution mapping of erythroid niches in human using subcellular spatial transcriptomics,GSE271824,GSE271824,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,MDS patient bone marrow,MONDO:0018881,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_94g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000072314049586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42393220,,GSM8386297,,,train,sda-all,samples/GSE271824/GSM8386297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8389375,brain,disease,pediatric high-grade glioma,brain,tumour tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,94660,Immune and tumor cell landscape in pediatric high grade gliomas,GSE271936,GSE271936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Diffuse High Grade Glioma,MONDO:1010030,luna,,,age rule: bare number read as years,juvenile,8,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998621576916,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40315846,,GSM8389375,,,train,sda-all,samples/GSE271936/GSM8389375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8389376,brain,disease,malignant glioma;ependymoma;childhood malignant neoplasm,brain,tumour tissue,Homo sapiens,human,neonatal or infant,female,Xenium,Xenium,True,fluorescence: DAPI,56117,Immune and tumor cell landscape in pediatric high grade gliomas,GSE271936,GSE271936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Ependymoma,MONDO:0100342;MONDO:0016698;MONDO:0006517,luna,,,luna,neonatal or infant,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499980638166047,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40315846,,GSM8389376,,,train,sda-all,samples/GSE271936/GSM8389376,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.8200000000000001}",,
GSM8389378,brain,disease,pediatric high-grade glioma,brain,tumour tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,104642,Immune and tumor cell landscape in pediatric high grade gliomas,GSE271936,GSE271936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Diffuse High Grade Glioma,MONDO:1010030,luna,,,age rule: bare number read as years,juvenile,7,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000186196623635,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40315846,,GSM8389378,,,train,sda-all,samples/GSE271936/GSM8389378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8396159,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,1462,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],GSE272236,GSE272236,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,no treatment applied,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,21834,counts,um,1.0,verified,4.226894534517015,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396159,,,train,sda-all,samples/GSE272236/GSM8396159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8396160,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,1398,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],GSE272236,GSE272236,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,no treatment applied,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,21834,counts,um,1.0,verified,4.248756506898975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41339360,,GSM8396160,,,train,sda-all,samples/GSE272236/GSM8396160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8396161,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2723,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],GSE272236,GSE272236,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,no treatment applied,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,21834,counts,um,1.0,verified,4.232015608494873,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396161,,,train,sda-all,samples/GSE272236/GSM8396161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8396162,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,1921,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],GSE272236,GSE272236,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,no treatment applied,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,21834,counts,um,1.0,verified,4.224432986778781,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396162,,,train,sda-all,samples/GSE272236/GSM8396162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8396163,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2301,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],GSE272236,GSE272236,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,no treatment applied,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,21834,counts,um,1.0,verified,4.2317715981227115,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396163,,,train,sda-all,samples/GSE272236/GSM8396163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8396164,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2383,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],GSE272236,GSE272236,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,no treatment applied,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,21834,counts,um,1.0,verified,4.226974064634488,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396164,,,train,sda-all,samples/GSE272236/GSM8396164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8396165,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2725,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],GSE272236,GSE272236,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,no treatment applied,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,21834,counts,um,1.0,verified,4.236681021294811,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396165,,,train,sda-all,samples/GSE272236/GSM8396165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8396166,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2887,Pericytes orchestrate a tumor-restraining microenvironment in glioblastoma [Spatial Transcriptomics],GSE272236,GSE272236,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,no treatment applied,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,21834,counts,um,1.0,verified,4.234191405533975,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41339360,,GSM8396166,,,train,sda-all,samples/GSE272236/GSM8396166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398121,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,57703,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,GSE272303,GSE272303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,,luna,adult,7,extracted field,Female,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49999051724137916,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398121,,,test,sda-all,samples/GSE272303/GSM8398121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398122,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,60632,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,GSE272303,GSE272303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,,luna,adult,7,extracted field,Female,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999939675973803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398122,,,test,sda-all,samples/GSE272303/GSM8398122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398123,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,61273,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,GSE272303,GSE272303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,,luna,adult,7,extracted field,Male,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49999624229670825,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398123,,,test,sda-all,samples/GSE272303/GSM8398123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398124,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,59214,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,GSE272303,GSE272303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,,luna,,,luna,adult,7,extracted field,Male,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000017247326665,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398124,,,test,sda-all,samples/GSE272303/GSM8398124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398125,brain,disease,synucleinopathy,brain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,51863,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,GSE272303,GSE272303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,MONDO:0000510,luna,,,luna,adult,7,extracted field,Female,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999803881090007,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398125,,,test,sda-all,samples/GSE272303/GSM8398125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398126,brain,disease,synucleinopathy,brain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,55349,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,GSE272303,GSE272303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,MONDO:0000510,luna,,,luna,adult,7,extracted field,Female,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000187941662908,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398126,,,test,sda-all,samples/GSE272303/GSM8398126,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398127,brain,disease,synucleinopathy,brain,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,52795,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,GSE272303,GSE272303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,MONDO:0000510,luna,,,luna,adult,7,extracted field,Male,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49998873281754674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398127,,,test,sda-all,samples/GSE272303/GSM8398127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398128,brain,disease,synucleinopathy,brain,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,56900,Imaging spatial transcriptomics in a transgenic mouse model of α-synucleinopathy,GSE272303,GSE272303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Coronal brain section,MONDO:0000510,luna,,,luna,adult,7,extracted field,Male,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000187941662908,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41545426,,GSM8398128,,,test,sda-all,samples/GSE272303/GSM8398128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398717,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1903,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400369126900356,platform_constant,4.400369126900356,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398717,,,train,hesrt,samples/GSE272334/GSM8398717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8398718,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2215,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674096,platform_constant,4.400339168674096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398718,,,train,hesrt,samples/GSE272334/GSM8398718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398719,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2804,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674118,platform_constant,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398719,,,train,hesrt,samples/GSE272334/GSM8398719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398720,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2730,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674118,platform_constant,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398720,,,train,hesrt,samples/GSE272334/GSM8398720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8398721,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3879,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674117,platform_constant,4.400339168674117,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398721,,,train,hesrt,samples/GSE272334/GSM8398721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8398722,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2519,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674118,platform_constant,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398722,,,train,hesrt,samples/GSE272334/GSM8398722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398723,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1814,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674118,platform_constant,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398723,,,train,hesrt,samples/GSE272334/GSM8398723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8398724,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1889,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674118,platform_constant,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398724,,,train,hesrt,samples/GSE272334/GSM8398724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398725,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3659,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400369126900356,platform_constant,4.400369126900356,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398725,,,train,hesrt,samples/GSE272334/GSM8398725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.77, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398726,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3332,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674118,platform_constant,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398726,,,train,hesrt,samples/GSE272334/GSM8398726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398727,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1586,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Radiotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674096,platform_constant,4.400339168674096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398727,,,train,hesrt,samples/GSE272334/GSM8398727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8398728,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3205,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674118,platform_constant,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398728,,,train,hesrt,samples/GSE272334/GSM8398728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8398729,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2247,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.69372706869371,platform_constant,4.69372706869371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398729,,,train,hesrt,samples/GSE272334/GSM8398729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8398730,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3262,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674118,platform_constant,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398730,,,train,hesrt,samples/GSE272334/GSM8398730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8398731,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3396,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.4003391686741065,platform_constant,4.4003391686741065,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398731,,,train,hesrt,samples/GSE272334/GSM8398731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8398732,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2773,The inflammatory micro-environment induced by targeted CNS radiotherapy is underpined by disruption of DNA methylation,GSE272334,GSE272334,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.400339168674118,platform_constant,4.400339168674118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40298030,,GSM8398732,,,train,hesrt,samples/GSE272334/GSM8398732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8398743,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,720758,Xenium spatial transcriptomics reveals C10 tumor transcriptomic changes induced by Smarta cell,GSE272337,GSE272337,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,C10 subcutaneous tumor,MONDO:0005070,luna,,PBS or Smarta treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mTumor_307g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999967345872518,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42313973,,GSM8398743,,,train,sda-all,samples/GSE272337/GSM8398743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8398744,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,710015,Xenium spatial transcriptomics reveals C10 tumor transcriptomic changes induced by Smarta cell,GSE272337,GSE272337,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,C10 subcutaneous tumor,MONDO:0005070,luna,,PBS or Smarta treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mTumor_307g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.500003810477725,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42313973,,GSM8398744,,,train,sda-all,samples/GSE272337/GSM8398744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8401816,lymph node,disease,Castleman disease,lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,47829,Spatial transcriptomics stereo-seq was used to reveal the functional compartmentalization of Unicentric Castleman Disease.,GSE272421,GSE272421,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,Lymph node,MONDO:0015564,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,stereo-seq,,,bin,29783,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8401816,,,val,sda-all,samples/GSE272421/GSM8401816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8404653,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1483,Mid-Lobular Hepatocytes Exhibit Transient Proliferation Pause and Stress Response through Atf4-Ddit3 axis in Early Acute Liver Injury (10x Visium),GSE272564,GSE272564+GSE272566,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,APAP 0h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.253865152198557,platform_constant,4.253865152198557,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8404653,,,train,hesrt,samples/GSE272564/GSM8404653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8404654,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1723,Mid-Lobular Hepatocytes Exhibit Transient Proliferation Pause and Stress Response through Atf4-Ddit3 axis in Early Acute Liver Injury (10x Visium),GSE272564,GSE272564+GSE272566,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,APAP 3h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.160419378674996,platform_constant,4.160419378674996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8404654,,,train,hesrt,samples/GSE272564/GSM8404654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8404655,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1585,Mid-Lobular Hepatocytes Exhibit Transient Proliferation Pause and Stress Response through Atf4-Ddit3 axis in Early Acute Liver Injury (10x Visium),GSE272564,GSE272564+GSE272566,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,APAP 6h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.160419378674996,platform_constant,4.160419378674996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8404655,,,train,hesrt,samples/GSE272564/GSM8404655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8404656,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1655,Mid-Lobular Hepatocytes Exhibit Transient Proliferation Pause and Stress Response through Atf4-Ddit3 axis in Early Acute Liver Injury (10x Visium),GSE272564,GSE272564+GSE272566,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,APAP 24h,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.049117658768747,platform_constant,4.049117658768747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8404656,,,train,hesrt,samples/GSE272564/GSM8404656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8413261,ovary,disease,squamous cell carcinoma;ovarian cancer;mature teratoma,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,476,Spatial transcriptome analysis for squamous cell carcinoma arising from mature teratoma,GSE272833,GSE272833,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,ovarian cancer,MONDO:0005096;MONDO:0008170;MONDO:0003517,luna,squamous cell carcinoma arising from mature teratoma,patient with SCC-MT,luna,not stated,,not stated,,GSE272833:Patient_1,Patient_1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.298348295306839,platform_constant,4.298348295306839,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39948701,,GSM8413261,,,train,hesrt,samples/GSE272833/GSM8413261,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8413262,ovary,disease,squamous cell carcinoma;ovarian cancer;mature teratoma,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,869,Spatial transcriptome analysis for squamous cell carcinoma arising from mature teratoma,GSE272833,GSE272833,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,ovarian cancer,MONDO:0005096;MONDO:0008170;MONDO:0003517,luna,squamous cell carcinoma arising from mature teratoma,patient with SCC-MT,luna,not stated,,not stated,,GSE272833:Patient_2,Patient_2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.29720302518842,platform_constant,4.29720302518842,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39948701,,GSM8413262,,,train,hesrt,samples/GSE272833/GSM8413262,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8413263,ovary,disease,squamous cell carcinoma;ovarian cancer;mature teratoma,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2597,Spatial transcriptome analysis for squamous cell carcinoma arising from mature teratoma,GSE272833,GSE272833,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,ovarian cancer,MONDO:0005096;MONDO:0008170;MONDO:0003517,luna,squamous cell carcinoma arising from mature teratoma,patient with SCC-MT,luna,not stated,,not stated,,GSE272833:Patient_3,Patient_3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.368956848044238,platform_constant,4.368956848044238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39948701,,GSM8413263,,,train,hesrt,samples/GSE272833/GSM8413263,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8413264,ovary,disease,squamous cell carcinoma;ovarian cancer;mature teratoma,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2750,Spatial transcriptome analysis for squamous cell carcinoma arising from mature teratoma,GSE272833,GSE272833,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,ovarian cancer,MONDO:0005096;MONDO:0008170;MONDO:0003517,luna,squamous cell carcinoma arising from mature teratoma,patient with SCC-MT,luna,not stated,,not stated,,GSE272833:Patient_3,Patient_3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.801156231088131,platform_constant,4.801156231088131,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39948701,,GSM8413264,,,train,hesrt,samples/GSE272833/GSM8413264,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8415601,lung,normal,,lung,cell culture,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1365,EWS-FLI1 Expression in Human Embryonic Mesenchymal Stem Cells Leads to Defective DNA Damage Repair and Ewing Sarcoma,GSE272960,GSE272960,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.000775996672156,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41136396,,GSM8415601,,,val,sda-all,samples/GSE272960/GSM8415601,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.58, ""disease_status"": 0.48, ""uberon"": 0.9, ""life_stage"": 0.98}",sample_kind;disease_status,low_confidence_annotation
GSM8415602,other,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1381,EWS-FLI1 Expression in Human Embryonic Mesenchymal Stem Cells Leads to Defective DNA Damage Repair and Ewing Sarcoma,GSE272960,GSE272960,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor mass,MONDO:0012817,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.007700421361625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41136396,,GSM8415602,,,val,sda-all,samples/GSE272960/GSM8415602,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8425592,brain,disease,brain glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4233,stRNA-seq of brain glioblastoma sample,GSE273275,GSE273275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,GBM surround,MONDO:0002501,luna,glioblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.091665845934915,platform_constant,4.091665845934915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39933531,10.1016/j.devcel.2025.01.014,GSM8425592,,,train,hesrt,samples/GSE273275/GSM8425592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8425593,brain,disease,brain glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3869,stRNA-seq of brain glioblastoma sample,GSE273275,GSE273275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,GBM centre,MONDO:0002501,luna,glioblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.102767356618687,platform_constant,4.102767356618687,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39933531,10.1016/j.devcel.2025.01.014,GSM8425593,,,train,hesrt,samples/GSE273275/GSM8425593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427428,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2401,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,VI,age rule: bare number read as years,aged,68,extracted field,male,GSE273378:30868,30868,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.074791939763849,platform_constant,4.074791939763849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427428,,,train,hesrt,samples/GSE273378/GSM8427428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8427429,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2756,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,VI,age rule: bare number read as years,aged,68,extracted field,male,GSE273378:30868,30868,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.139593638518339,platform_constant,4.139593638518339,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427429,,,train,hesrt,samples/GSE273378/GSM8427429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8427430,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2724,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,VI,age rule: bare number read as years,aged,68,extracted field,female,GSE273378:21448,21448,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.200198979418035,platform_constant,4.200198979418035,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427430,,,train,hesrt,samples/GSE273378/GSM8427430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427431,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1728,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,VI,age rule: bare number read as years,aged,68,extracted field,female,GSE273378:21448,21448,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.023532142130024,platform_constant,4.023532142130024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427431,,,train,hesrt,samples/GSE273378/GSM8427431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8427432,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3922,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,NST,age rule: bare number read as years,aged,71,extracted field,male,GSE273378:27086,27086,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.38967506668645,platform_constant,4.38967506668645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427432,,,train,hesrt,samples/GSE273378/GSM8427432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427433,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3525,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,VI,age rule: bare number read as years,aged,66,extracted field,male,GSE273378:4710,4710,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.449015474663473,platform_constant,4.449015474663473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427433,,,train,hesrt,samples/GSE273378/GSM8427433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8427434,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3230,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,NST,age rule: bare number read as years,aged,72,extracted field,male,GSE273378:611,611,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.3133289525714895,platform_constant,4.3133289525714895,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427434,,,train,hesrt,samples/GSE273378/GSM8427434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427435,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3784,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,VI,age rule: bare number read as years,aged,65,extracted field,male,GSE273378:9475,9475,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.098780991094822,platform_constant,4.098780991094822,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427435,,,train,hesrt,samples/GSE273378/GSM8427435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427436,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2833,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,LMP,age rule: bare number read as years,adult,52,extracted field,female,GSE273378:1984,1984,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.209633668685756,platform_constant,4.209633668685756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427436,,,train,hesrt,samples/GSE273378/GSM8427436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427437,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2855,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,VI,age rule: bare number read as years,aged,66,extracted field,male,GSE273378:11980,11980,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.158626158747832,platform_constant,4.158626158747832,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427437,,,train,hesrt,samples/GSE273378/GSM8427437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8427438,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2801,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,VI,age rule: bare number read as years,adult,63,extracted field,female,GSE273378:3255,3255,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.138583478281284,platform_constant,4.138583478281284,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427438,,,train,hesrt,samples/GSE273378/GSM8427438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427439,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2620,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,NST,age rule: bare number read as years,aged,69,extracted field,male,GSE273378:29063,29063,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.350449412695565,platform_constant,4.350449412695565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427439,,,train,hesrt,samples/GSE273378/GSM8427439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427440,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3604,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,NST,age rule: bare number read as years,adult,63,extracted field,female,GSE273378:13034,13034,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.279743380674974,platform_constant,4.279743380674974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427440,,,train,hesrt,samples/GSE273378/GSM8427440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427441,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2912,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,NST,age rule: bare number read as years,aged,65,extracted field,female,GSE273378:915,915,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.122927155623384,platform_constant,4.122927155623384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427441,,,train,hesrt,samples/GSE273378/GSM8427441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427442,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1915,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,NST,age rule: bare number read as years,aged,72,extracted field,female,GSE273378:22809,22809,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.198178671948288,platform_constant,4.198178671948288,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427442,,,train,hesrt,samples/GSE273378/GSM8427442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8427443,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1744,Vascular invasion-associated gene expression is detectable in pre-surgical biopsies of stage I lung adenocarcinoma [Spatial Transcriptomics],GSE273378,GSE273378,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,NST,age rule: bare number read as years,aged,75,extracted field,female,GSE273378:25115,25115,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.1731791269700595,platform_constant,4.1731791269700595,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41876493,,GSM8427443,,,train,hesrt,samples/GSE273378/GSM8427443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8428199,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,The roles of glioma-associated macrophages/microglia in human GBM,GSE273432,GSE273432,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,glioblastoma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.355519526324199,platform_constant,5.355519526324199,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39921277,,GSM8428199,,,train,hesrt,samples/GSE273432/GSM8428199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8428200,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3638,The roles of glioma-associated macrophages/microglia in human GBM,GSE273432,GSE273432,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,glioblastoma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.7759914035569775,platform_constant,4.7759914035569775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39921277,,GSM8428200,,,train,hesrt,samples/GSE273432/GSM8428200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8428201,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4437,The roles of glioma-associated macrophages/microglia in human GBM,GSE273432,GSE273432,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,glioblastoma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.263487657307462,platform_constant,6.263487657307462,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39921277,,GSM8428201,,,train,hesrt,samples/GSE273432/GSM8428201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8428202,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4635,The roles of glioma-associated macrophages/microglia in human GBM,GSE273432,GSE273432,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,glioblastoma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.981682021878986,platform_constant,5.981682021878986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39921277,,GSM8428202,,,train,hesrt,samples/GSE273432/GSM8428202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8428408,adipose tissue,disease,breast cancer,mammary fat pad,xenograft,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2596,Extraction of a Stromal Metastatic Gene Signature in Breast Cancer via Spatial Profiling,GSE273439,GSE273439,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0012282,Breast tumor,MONDO:0007254,luna,,4T1 tumor model (1x10^5 4T1 cells injected in mammary fat pad),age rule: age with unit,adult,8 weeks,not stated,,GSE273439:GSM8428408,GSM8428408,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.8464286891871495,platform_constant,6.8464286891871495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40065328,,GSM8428408,,,train,hesrt,samples/GSE273439/GSM8428408,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.45, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 0.92}",sample_kind,low_confidence_annotation
GSM8428409,lung,disease,breast cancer,lung,metastasis,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1697,Extraction of a Stromal Metastatic Gene Signature in Breast Cancer via Spatial Profiling,GSE273439,GSE273439,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0007254,luna,,4T1 tumor model (1x10^5 4T1 cells injected in mammary fat pad),age rule: age with unit,adult,8 weeks,not stated,,GSE273439:GSM8428409,GSM8428409,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.612765993420255,platform_constant,6.612765993420255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40065328,,GSM8428409,,,train,hesrt,samples/GSE273439/GSM8428409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.74}",sample_kind,low_confidence_annotation
GSM8428410,adipose tissue,disease,breast cancer,mammary fat pad,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2372,Extraction of a Stromal Metastatic Gene Signature in Breast Cancer via Spatial Profiling,GSE273439,GSE273439,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0012282,Breast tumor,MONDO:0007254,luna,,4T1 tumor model (1x10^5 4T1 cells injected in mammary fat pad),age rule: age with unit,adult,8 weeks,not stated,,GSE273439:GSM8428410,GSM8428410,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.756521775885902,platform_constant,6.756521775885902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40065328,,GSM8428410,,,train,hesrt,samples/GSE273439/GSM8428410,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.51, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 0.87}",sample_kind,low_confidence_annotation
GSM8428411,lung,disease,breast cancer,lung,metastasis,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2780,Extraction of a Stromal Metastatic Gene Signature in Breast Cancer via Spatial Profiling,GSE273439,GSE273439,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0007254,luna,,4T1 tumor model (1x10^5 4T1 cells injected in mammary fat pad),age rule: age with unit,adult,8 weeks,not stated,,GSE273439:GSM8428411,GSM8428411,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.4249992866730095,platform_constant,6.4249992866730095,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40065328,,GSM8428411,,,train,hesrt,samples/GSE273439/GSM8428411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM8429991,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2787,Mapping the genetic landscape establishing a tumor immune microenvironment favorable for anti-PD-1 response in mice and humans (Visium).,GSE273489,GSE273489,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,colorectal carcinoma,isotype control,age rule: age with unit,not stated,8–12 weeks,extracted field,female,GSE273489:C57BL/6J x CC080/TauUncJ,C57BL/6J x CC080/TauUncJ,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.090066160640678,platform_constant,4.090066160640678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40343794,,GSM8429991,,,train,hesrt,samples/GSE273489/GSM8429991,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8429992,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2710,Mapping the genetic landscape establishing a tumor immune microenvironment favorable for anti-PD-1 response in mice and humans (Visium).,GSE273489,GSE273489,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,colorectal carcinoma,isotype control,age rule: age with unit,not stated,8–12 weeks,extracted field,female,GSE273489:C57BL/6J x CC075/UncJ,C57BL/6J x CC075/UncJ,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.090066160640678,platform_constant,4.090066160640678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40343794,,GSM8429992,,,train,hesrt,samples/GSE273489/GSM8429992,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8429993,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3174,Mapping the genetic landscape establishing a tumor immune microenvironment favorable for anti-PD-1 response in mice and humans (Visium).,GSE273489,GSE273489,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,colorectal carcinoma,isotype control,age rule: age with unit,not stated,8–12 weeks,extracted field,female,GSE273489:C57BL/6J x CC080/TauUncJ,C57BL/6J x CC080/TauUncJ,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.090066160640678,platform_constant,4.090066160640678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40343794,,GSM8429993,,,train,hesrt,samples/GSE273489/GSM8429993,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.78, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8429994,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3276,Mapping the genetic landscape establishing a tumor immune microenvironment favorable for anti-PD-1 response in mice and humans (Visium).,GSE273489,GSE273489,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,colorectal carcinoma,isotype control,age rule: age with unit,not stated,8–12 weeks,extracted field,female,GSE273489:C57BL/6J x CC075/UncJ,C57BL/6J x CC075/UncJ,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.090066160640669,platform_constant,4.090066160640669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40343794,,GSM8429994,,,train,hesrt,samples/GSE273489/GSM8429994,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.78, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8431774,other,disease,melanoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,9231,Programmed cell death-1 receptor deficiency enhances CD30+ T regulatory cell function in Melanoma [Murine NanoString CosMx SMI],GSE273530,GSE273530,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,Melanoma tumours,MONDO:0005105,luna,,WTTeff:WT Treg or WTTeff:PD1KO Treg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1194,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40457060,,GSM8431774,,,train,sda-all,samples/GSE273530/GSM8431774,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8432292,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,False,,45239,Spatial transcriptomic analysis of human dorsoal root ganglia neurons [Xenium],GSE273557,GSE273557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000044,dorsal root ganglia,,luna,,,age rule: bare number read as years,adult,56,extracted field,female,GSE273557:2103-02139,2103-02139,fresh frozen,Fresh frozen,release v3,imaging-based,Xenium,,,cell,496,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39496796,,GSM8432292,,,train,sda-all,samples/GSE273557/GSM8432292,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8432293,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,27162,Spatial transcriptomic analysis of human dorsoal root ganglia neurons [Xenium],GSE273557,GSE273557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000044,dorsal root ganglia,,luna,,,age rule: bare number read as years,adult,23,extracted field,male,GSE273557:2106-05090,2106-05090,fresh frozen,Fresh frozen,release v3,imaging-based,Xenium,,,cell,496,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39496796,,GSM8432293,,,train,sda-all,samples/GSE273557/GSM8432293,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8432294,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,40896,Spatial transcriptomic analysis of human dorsoal root ganglia neurons [Xenium],GSE273557,GSE273557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000044,dorsal root ganglia,,luna,,,age rule: bare number read as years,adult,23,extracted field,male,GSE273557:2106-05090,2106-05090,fresh frozen,Fresh frozen,release v3,imaging-based,Xenium,,,cell,512,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39496796,,GSM8432294,,,train,sda-all,samples/GSE273557/GSM8432294,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8432295,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,38021,Spatial transcriptomic analysis of human dorsoal root ganglia neurons [Xenium],GSE273557,GSE273557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000044,dorsal root ganglia,,luna,,,age rule: bare number read as years,adult,23,extracted field,male,GSE273557:2106-05090,2106-05090,fresh frozen,Fresh frozen,release v3,imaging-based,Xenium,,,cell,520,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,39496796,,GSM8432295,,,train,sda-all,samples/GSE273557/GSM8432295,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8433816,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,211627,In vivo armed macrophages curb liver metastasis through tumor reactive T cell rejuvenation (MERFISH),GSE273606,GSE273606,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,MONDO:1060297,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40216735,,GSM8433816,,,test,sda-all,samples/GSE273606/GSM8433816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8433817,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,249986,In vivo armed macrophages curb liver metastasis through tumor reactive T cell rejuvenation (MERFISH),GSE273606,GSE273606,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,MONDO:1060297,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,40216735,,GSM8433817,,,test,sda-all,samples/GSE273606/GSM8433817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8440303,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4794,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],GSE273952,GSE273952,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005005,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,5.727853719982235,platform_constant,5.727853719982235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440303,,,train,hesrt,samples/GSE273952/GSM8440303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8440304,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4991,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],GSE273952,GSE273952,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005005,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,5.753886136883518,platform_constant,5.753886136883518,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440304,,,train,hesrt,samples/GSE273952/GSM8440304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8440305,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4793,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],GSE273952,GSE273952,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005005,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,5.308699731640132,platform_constant,5.308699731640132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440305,,,train,hesrt,samples/GSE273952/GSM8440305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8440306,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4547,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],GSE273952,GSE273952,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005005,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,5.260274309260301,platform_constant,5.260274309260301,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440306,,,train,hesrt,samples/GSE273952/GSM8440306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8440308,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4962,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],GSE273952,GSE273952,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005005,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.487670945550741,platform_constant,6.487670945550741,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440308,,,train,hesrt,samples/GSE273952/GSM8440308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8440309,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4693,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],GSE273952,GSE273952,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005005,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.19348278241706,platform_constant,6.19348278241706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440309,,,train,hesrt,samples/GSE273952/GSM8440309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8440310,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4958,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],GSE273952,GSE273952,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005005,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.364383829353919,platform_constant,7.364383829353919,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440310,,,train,hesrt,samples/GSE273952/GSM8440310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8440312,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4943,GABA promotes resistance to immunotherapy of patients with TLS-positive tumors [Spatial Transcriptomics],GSE273952,GSE273952,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005005,luna,renal cell cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.106357473557294,platform_constant,6.106357473557294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8440312,,,train,hesrt,samples/GSE273952/GSM8440312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8440997,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2300,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",GSE273978,GSE273978,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,Sham Vehicle,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.806106985575569,platform_constant,4.806106985575569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8440997,,,train,hesrt,samples/GSE273978/GSM8440997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8440998,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2151,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",GSE273978,GSE273978,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,UUO Vehicle,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.808396885786738,platform_constant,4.808396885786738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8440998,,,train,hesrt,samples/GSE273978/GSM8440998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8440999,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2218,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",GSE273978,GSE273978,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,UUO CH6824025,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.806488282377554,platform_constant,4.806488282377554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8440999,,,train,hesrt,samples/GSE273978/GSM8440999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8441000,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2423,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",GSE273978,GSE273978,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,UUO CH6824025,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.8076337470150765,platform_constant,4.8076337470150765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8441000,,,train,hesrt,samples/GSE273978/GSM8441000,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8441001,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1974,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",GSE273978,GSE273978,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,UUO Vehicle,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.3674300320928845,platform_constant,4.3674300320928845,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8441001,,,train,hesrt,samples/GSE273978/GSM8441001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8441002,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2051,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",GSE273978,GSE273978,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,UUO Vehicle,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.809020154111703,platform_constant,4.809020154111703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8441002,,,train,hesrt,samples/GSE273978/GSM8441002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8441003,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2027,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",GSE273978,GSE273978,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,UUO CH6824025,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.8076337470150765,platform_constant,4.8076337470150765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8441003,,,train,hesrt,samples/GSE273978/GSM8441003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8441004,kidney,disease,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2320,"CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice",GSE273978,GSE273978,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,UUO CH6824025,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.808396885786738,platform_constant,4.808396885786738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39379147,,GSM8441004,,,train,hesrt,samples/GSE273978/GSM8441004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8442438,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,26037,Spatiotemporal liver dynamics shapes hepatocellular heterogeneity and impacts in vivo gene engineering [MERFISH],GSE274042,GSE274042,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8442438,,,train,sda-all,samples/GSE274042/GSM8442438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8442439,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,85929,Spatiotemporal liver dynamics shapes hepatocellular heterogeneity and impacts in vivo gene engineering [MERFISH],GSE274042,GSE274042,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8442439,,,train,sda-all,samples/GSE274042/GSM8442439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8442674,unknown,disease,Burkitt lymphoma,,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,3687,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,GSE274051,GSE274051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,EBV+ Burkitt Lymphoma,MONDO:0007243,luna,HIV-associated non-Hodgkin lymphoma,EBV-positive,luna,not stated,,extracted field,male,GSE274051:Luf_5,Luf_5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.796875821980031,platform_constant,6.796875821980031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442674,,,train,hesrt,samples/GSE274051/GSM8442674,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442675,unknown,disease,non-Hodgkin lymphoma;Epstein-Barr virus-associated lymphoproliferative disorder,,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,6308,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,GSE274051,GSE274051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,EBV+ Polymorphic Lymphoma,MONDO:0018908;MONDO:0017343,luna,HIV-associated non-Hodgkin lymphoma,EBV-positive,luna,not stated,,extracted field,male,GSE274051:Luf_9,Luf_9,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.161027852456357,platform_constant,8.161027852456357,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442675,,,train,hesrt,samples/GSE274051/GSM8442675,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442676,unknown,disease,diffuse large B-cell lymphoma;Epstein-Barr virus-associated lymphoproliferative disorder,,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,9776,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,GSE274051,GSE274051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,EBV+ Immunoblastic Lymphoma,MONDO:0018905;MONDO:0017343,luna,HIV-associated non-Hodgkin lymphoma,EBV-positive,luna,not stated,,extracted field,male,GSE274051:Luf_1,Luf_1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.866895181199018,platform_constant,6.866895181199018,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442676,,,train,hesrt,samples/GSE274051/GSM8442676,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442677,unknown,disease,plasmablastic lymphoma,,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,2814,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,GSE274051,GSE274051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,EBV+ Plasmablastic Lymphoma,MONDO:0017347,luna,HIV-associated non-Hodgkin lymphoma,EBV-positive,luna,not stated,,extracted field,male,GSE274051:Luf_3,Luf_3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.6042598542451225,platform_constant,5.6042598542451225,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442677,,,train,hesrt,samples/GSE274051/GSM8442677,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442678,unknown,disease,plasma cell neoplasm;diffuse large B-cell lymphoma;Epstein-Barr virus-associated lymphoproliferative disorder,,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,3371,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,GSE274051,GSE274051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,EBV+ High Grade Plasma Cell Neoplasm,MONDO:0004959;MONDO:0018905;MONDO:0017343,luna,HIV-associated non-Hodgkin lymphoma,EBV-positive,luna,not stated,,extracted field,male,GSE274051:Luf_7,Luf_7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.308339312511227,platform_constant,4.308339312511227,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442678,,,train,hesrt,samples/GSE274051/GSM8442678,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442679,unknown,disease,B-cell non-Hodgkin lymphoma,,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,13945,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,GSE274051,GSE274051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,EBV- High Grade GC B cell NHL,MONDO:0015759,luna,HIV-associated non-Hodgkin lymphoma,EBV-negative,luna,not stated,,extracted field,male,GSE274051:Luf_4,Luf_4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.490553590176166,platform_constant,8.490553590176166,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442679,,,train,hesrt,samples/GSE274051/GSM8442679,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442680,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,3470,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,GSE274051,GSE274051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,EBV- GC DLBCL,MONDO:0018905,luna,HIV-associated non-Hodgkin lymphoma,EBV-negative,luna,not stated,,extracted field,female,GSE274051:Luf_2,Luf_2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.825631669354788,platform_constant,3.825631669354788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442680,,,train,hesrt,samples/GSE274051/GSM8442680,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442681,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,9020,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,GSE274051,GSE274051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,EBV- DLBCL with Plasma Cell features,MONDO:0018905,luna,HIV-associated non-Hodgkin lymphoma,EBV-negative,luna,not stated,,extracted field,male,GSE274051:Luf_6,Luf_6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.564352226404502,platform_constant,7.564352226404502,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442681,,,train,hesrt,samples/GSE274051/GSM8442681,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442682,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,3980,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,GSE274051,GSE274051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,EBV- non-GC DLBCL (relapse),MONDO:0018905,luna,HIV-associated non-Hodgkin lymphoma,EBV-negative,luna,not stated,,extracted field,male,GSE274051:Luf_8,Luf_8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.724477700702643,platform_constant,5.724477700702643,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442682,,,train,hesrt,samples/GSE274051/GSM8442682,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442683,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,4370,Spatial transcriptomics of HIV-associated non-Hodgkin lymphomas by EBV status and cell of origin,GSE274051,GSE274051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,EBV- non-GC DLBCL (recurrence),MONDO:0018905,luna,HIV-associated non-Hodgkin lymphoma,EBV-negative,luna,not stated,,extracted field,male,GSE274051:Luf_10,Luf_10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.915073208828963,platform_constant,6.915073208828963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41279969,,GSM8442683,,,train,hesrt,samples/GSE274051/GSM8442683,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8442776,uterus,perturbation,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,369,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,GSE274059,GSE274059,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Mouse uterus,,luna,,Hif2a-flox/flox,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.301019898098783,platform_constant,4.301019898098783,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442776,,,train,hesrt,samples/GSE274059/GSM8442776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM8442777,uterus,perturbation,,uterus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,533,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,GSE274059,GSE274059,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Mouse uterus,,luna,,Hif2s-flox/flox; Pgr-Cre/+,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.302928210239887,platform_constant,4.302928210239887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442777,,,train,hesrt,samples/GSE274059/GSM8442777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM8442778,uterus,perturbation,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,662,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,GSE274059,GSE274059,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Mouse uterus,,luna,,Lox-flox/flox,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.299999935930002,platform_constant,4.299999935930002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442778,,,train,hesrt,samples/GSE274059/GSM8442778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.79}",disease_status,low_confidence_annotation
GSM8442779,uterus,perturbation,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,436,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,GSE274059,GSE274059,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Mouse uterus,,luna,,Lox-flox/flox,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2996182326834935,platform_constant,4.2996182326834935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442779,,,train,hesrt,samples/GSE274059/GSM8442779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM8442780,uterus,perturbation,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,454,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,GSE274059,GSE274059,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Mouse uterus,,luna,,Lox-flox/flox; Pgr-Cre/+,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.301526457314896,platform_constant,4.301526457314896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442780,,,train,hesrt,samples/GSE274059/GSM8442780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM8442781,uterus,perturbation,,uterus,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,408,Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion,GSE274059,GSE274059,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Mouse uterus,,luna,,Lox-flox/flox; Pgr-Cre/+,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.3007635457758076,platform_constant,4.3007635457758076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41803091,,GSM8442781,,,train,hesrt,samples/GSE274059/GSM8442781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM8443449,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4987,Spatial transcriptomics on treatment-naïve pancreatic ductal adenocarcinoma (PDAC) patients,GSE274103,GSE274103,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,78.9,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.650537450014783,platform_constant,4.650537450014783,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40154487,,GSM8443449,,,train,hesrt,samples/GSE274103/GSM8443449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8443450,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4380,Spatial transcriptomics on treatment-naïve pancreatic ductal adenocarcinoma (PDAC) patients,GSE274103,GSE274103,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,80.9,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.477304139549158,platform_constant,4.477304139549158,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40154487,,GSM8443450,,,train,hesrt,samples/GSE274103/GSM8443450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8443451,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4134,Spatial transcriptomics on treatment-naïve pancreatic ductal adenocarcinoma (PDAC) patients,GSE274103,GSE274103,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,78.2,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.464487715384358,platform_constant,4.464487715384358,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40154487,,GSM8443451,,,train,hesrt,samples/GSE274103/GSM8443451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8443452,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4983,Spatial transcriptomics on treatment-naïve pancreatic ductal adenocarcinoma (PDAC) patients,GSE274103,GSE274103,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,77.3,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.477419175240472,platform_constant,4.477419175240472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40154487,,GSM8443452,,,train,hesrt,samples/GSE274103/GSM8443452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8443453,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4952,Spatial transcriptomics on treatment-naïve pancreatic ductal adenocarcinoma (PDAC) patients,GSE274103,GSE274103,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,84.8,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.477419175240484,platform_constant,4.477419175240484,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40154487,,GSM8443453,,,train,hesrt,samples/GSE274103/GSM8443453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8447269,adrenal gland,disease,primary aldosteronism;adenoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1761,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,APA,MONDO:0001422;MONDO:0004972,luna,primary aldosteronism,KCNJ5_MUT,luna,not stated,,not stated,,GSE274314:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.1806450435633495,platform_constant,4.1806450435633495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447269,,,train,hesrt,samples/GSE274314/GSM8447269,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8447270,adrenal gland,disease,primary aldosteronism,adrenal gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1141,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adjacent,MONDO:0001422,mondo_predicate,,adjacent,luna,not stated,,not stated,,GSE274314:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.1806450435633495,platform_constant,4.1806450435633495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447270,,,train,hesrt,samples/GSE274314/GSM8447270,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447271,adrenal gland,disease,primary aldosteronism;adenoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,394,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,APA,MONDO:0001422;MONDO:0004972,luna,primary aldosteronism,KCNJ5_WT,luna,not stated,,not stated,,GSE274314:Patient2,Patient2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.129399245160178,platform_constant,4.129399245160178,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447271,,,train,hesrt,samples/GSE274314/GSM8447271,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8447272,adrenal gland,disease,hyperaldosteronism,adrenal gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,756,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adjacent,MONDO:0003009,luna,,adjacent,luna,not stated,,not stated,,GSE274314:Patient2,Patient2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.129399245160178,platform_constant,4.129399245160178,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447272,,,train,hesrt,samples/GSE274314/GSM8447272,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447273,adrenal gland,disease,hyperaldosteronism,adrenal gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,830,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adjacent,MONDO:0003009,luna,,adjacent,luna,not stated,,not stated,,GSE274314:Patient3,Patient3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.178471586154414,platform_constant,4.178471586154414,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447273,,,train,hesrt,samples/GSE274314/GSM8447273,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.31, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447274,adrenal gland,disease,primary aldosteronism;adenoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2024,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,APA,MONDO:0001422;MONDO:0004972,luna,primary aldosteronism,KCNJ5_MUT,luna,not stated,,not stated,,GSE274314:Patient3,Patient3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.315795907440296,platform_constant,4.315795907440296,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447274,,,train,hesrt,samples/GSE274314/GSM8447274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8447275,adrenal gland,disease,hyperaldosteronism,adrenal gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,414,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adjacent,MONDO:0003009,mondo_predicate,,adjacent,luna,not stated,,not stated,,GSE274314:Patient4,Patient4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.180379720869155,platform_constant,4.180379720869155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447275,,,train,hesrt,samples/GSE274314/GSM8447275,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447276,adrenal gland,disease,primary aldosteronism;adenoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,404,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,APA,MONDO:0001422;MONDO:0004972,luna,primary aldosteronism,KCNJ5_WT,luna,not stated,,not stated,,GSE274314:Patient4,Patient4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.077419305909678,platform_constant,4.077419305909678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447276,,,train,hesrt,samples/GSE274314/GSM8447276,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8447277,adrenal gland,disease,primary aldosteronism,adrenal gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1086,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adjacent,MONDO:0001422,mondo_predicate,,adjacent,luna,not stated,,not stated,,GSE274314:Patient5,Patient5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.3138852855971175,platform_constant,4.3138852855971175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447277,,,train,hesrt,samples/GSE274314/GSM8447277,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.96, ""disease_status"": 0.37, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447278,adrenal gland,disease,primary aldosteronism;adenoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1005,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,APA,MONDO:0001422;MONDO:0004972,luna,primary aldosteronism,KCNJ5_MUT,luna,not stated,,not stated,,GSE274314:Patient5,Patient5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.339678235324803,platform_constant,4.339678235324803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447278,,,train,hesrt,samples/GSE274314/GSM8447278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8447279,adrenal gland,disease,hyperaldosteronism,adrenal gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1906,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adjacent,MONDO:0003009,mondo_predicate,,adjacent,luna,not stated,,not stated,,GSE274314:Patient6,Patient6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.218614830370244,platform_constant,4.218614830370244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447279,,,train,hesrt,samples/GSE274314/GSM8447279,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447280,adrenal gland,disease,primary aldosteronism;adenoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1608,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,APA,MONDO:0001422;MONDO:0004972,luna,primary aldosteronism,KCNJ5_WT,luna,not stated,,not stated,,GSE274314:Patient6,Patient6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.359023129524562,platform_constant,4.359023129524562,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447280,,,train,hesrt,samples/GSE274314/GSM8447280,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8447281,adrenal gland,disease,primary aldosteronism,adrenal gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1945,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adjacent,MONDO:0001422,mondo_predicate,,adjacent,luna,not stated,,not stated,,GSE274314:Patient7,Patient7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.2494025026260225,platform_constant,4.2494025026260225,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447281,,,train,hesrt,samples/GSE274314/GSM8447281,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.27, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8447282,adrenal gland,disease,primary aldosteronism;adenoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1380,Primary Aldosteronism: Spatial Multiomics Mapping of Genotype-Dependent Heterogeneity and Tumor Expansion of Aldosterone-Producing Adenomas,GSE274314,GSE274314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,APA,MONDO:0001422;MONDO:0004972,luna,primary aldosteronism,KCNJ5_MUT,luna,not stated,,not stated,,GSE274314:Patient7,Patient7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.237732365145434,platform_constant,4.237732365145434,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37125608;39826326,,GSM8447282,,,train,hesrt,samples/GSE274314/GSM8447282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8449354,brain,perturbation,,cerebral hemisphere,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,39862,In vivo Spatial Perturb-Seq in the mouse brain,GSE274447,GSE274447,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001869,brain coronal hemisphere,,luna,,Injected,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,STOMICS,,,cell,26280,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41723140,,GSM8449354,,,train,sda-all,samples/GSE274447/GSM8449354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM8450059,skin,disease,pyoderma gangrenosum,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1616,IL-12/IL-23 blockade reveals patterns of asynchronous inflammation in pyoderma gangrenosum,GSE274489,GSE274489,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0018824,luna,pyoderma gangrenosum,Untreated,luna,not stated,,not stated,,GSE274489:DP22,DP22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.909064555617312,platform_constant,2.909064555617312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39393505,,GSM8450059,,,train,hesrt,samples/GSE274489/GSM8450059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8450060,skin,disease,pyoderma gangrenosum,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1304,IL-12/IL-23 blockade reveals patterns of asynchronous inflammation in pyoderma gangrenosum,GSE274489,GSE274489,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0018824,luna,pyoderma gangrenosum,Untreated,luna,not stated,,not stated,,GSE274489:DP22,DP22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.167862986124308,platform_constant,5.167862986124308,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39393505,,GSM8450060,,,train,hesrt,samples/GSE274489/GSM8450060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8450061,skin,disease,pyoderma gangrenosum,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,919,IL-12/IL-23 blockade reveals patterns of asynchronous inflammation in pyoderma gangrenosum,GSE274489,GSE274489,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0018824,luna,pyoderma gangrenosum,ustekinumab,luna,not stated,,not stated,,GSE274489:DP23,DP23,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.9049645985007713,platform_constant,2.9049645985007713,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39393505,,GSM8450061,,,train,hesrt,samples/GSE274489/GSM8450061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8450062,skin,disease,pyoderma gangrenosum,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1838,IL-12/IL-23 blockade reveals patterns of asynchronous inflammation in pyoderma gangrenosum,GSE274489,GSE274489,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0018824,luna,pyoderma gangrenosum,ustekinumab,luna,not stated,,not stated,,GSE274489:DP23,DP23,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.3846617139460684,platform_constant,3.3846617139460684,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39393505,,GSM8450062,,,train,hesrt,samples/GSE274489/GSM8450062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8450394,eye,normal,,eyelid,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,375,Spatial transcriptomics of murine eyelid,GSE274497,GSE274497,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001711,eyelid,,luna,,wild type,age rule: age with unit,adult,8 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,5.83384571514098,platform_constant,5.83384571514098,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39955307,,GSM8450394,,,train,hesrt,samples/GSE274497/GSM8450394,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8450578,ovary,disease,ovarian cancer,ovary,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2823,Consequences of the perivascular niche remodeling for tumoricidal T-cell trafficking into metastasis of ovarian cancer [Spatial Transciptomics],GSE274509,GSE274509,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,ovarian cancer,MONDO:0008170,luna,ovarian cancer,Untreated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.986277110945238,platform_constant,3.986277110945238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39372930;41679728,,GSM8450578,,,train,hesrt,samples/GSE274509/GSM8450578,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 0.56, ""disease_status"": 1.0, ""uberon"": 0.25, ""life_stage"": 1.0}",organ;sample_kind;uberon,low_confidence_annotation
GSM8450579,ovary,disease,ovarian cancer,ovary,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2312,Consequences of the perivascular niche remodeling for tumoricidal T-cell trafficking into metastasis of ovarian cancer [Spatial Transciptomics],GSE274509,GSE274509,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,ovarian cancer,MONDO:0008170,luna,ovarian cancer,ACT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.004158773964351,platform_constant,4.004158773964351,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39372930;41679728,,GSM8450579,,,train,hesrt,samples/GSE274509/GSM8450579,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.28, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8450580,ovary,disease,ovarian cancer,ovary,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1676,Consequences of the perivascular niche remodeling for tumoricidal T-cell trafficking into metastasis of ovarian cancer [Spatial Transciptomics],GSE274509,GSE274509,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,ovarian cancer,MONDO:0008170,luna,ovarian cancer,OV-FC + ACT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.940793294660439,platform_constant,3.940793294660439,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39372930;41679728,,GSM8450580,,,train,hesrt,samples/GSE274509/GSM8450580,sda-tissue-disease-2.3,"{""organ"": 0.44, ""sample_kind"": 0.51, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",organ;sample_kind;uberon,low_confidence_annotation
GSM8450581,ovary,disease,ovarian cancer,ovary,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2329,Consequences of the perivascular niche remodeling for tumoricidal T-cell trafficking into metastasis of ovarian cancer [Spatial Transciptomics],GSE274509,GSE274509,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,ovarian cancer,MONDO:0008170,luna,ovarian cancer,OV-CXCR4 + ACT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.974449856511901,platform_constant,3.974449856511901,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39372930;41679728,,GSM8450581,,,train,hesrt,samples/GSE274509/GSM8450581,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 0.39, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",sample_kind;uberon,low_confidence_annotation
GSM8452847,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2753,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,83,extracted field,female,GSE274557:Pt-1,Pt-1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.4999927144634293,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452847,,,train,hesrt,samples/GSE274557/GSM8452847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452848,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2956,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,83,extracted field,female,GSE274557:Pt-1,Pt-1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000058427649042,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452848,,,train,hesrt,samples/GSE274557/GSM8452848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8452849,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3047,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,83,extracted field,female,GSE274557:Pt-1,Pt-1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000149192692016,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452849,,,train,hesrt,samples/GSE274557/GSM8452849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452850,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2674,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,79,extracted field,female,GSE274557:Pt-2,Pt-2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000118152387497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452850,,,train,hesrt,samples/GSE274557/GSM8452850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452851,lung,disease,malignant pancreatic neoplasm,lung,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2867,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,79,extracted field,female,GSE274557:Pt-2,Pt-2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.49999953486251936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452851,,,train,hesrt,samples/GSE274557/GSM8452851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8452852,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2322,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,79,extracted field,female,GSE274557:Pt-2,Pt-2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000152423169756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452852,,,train,hesrt,samples/GSE274557/GSM8452852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452853,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2999,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,89,extracted field,female,GSE274557:Pt-3,Pt-3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000115204718785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452853,,,train,hesrt,samples/GSE274557/GSM8452853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452854,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2696,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,89,extracted field,female,GSE274557:Pt-3,Pt-3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000127304900693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452854,,,train,hesrt,samples/GSE274557/GSM8452854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8452855,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2537,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,89,extracted field,female,GSE274557:Pt-3,Pt-3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.4999857108665287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452855,,,train,hesrt,samples/GSE274557/GSM8452855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8452856,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3155,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,79,extracted field,female,GSE274557:Pt-4,Pt-4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000059724147943,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452856,,,train,hesrt,samples/GSE274557/GSM8452856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452857,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2773,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,79,extracted field,female,GSE274557:Pt-4,Pt-4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000087145489853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452857,,,train,hesrt,samples/GSE274557/GSM8452857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8452858,lung,disease,malignant pancreatic neoplasm,lung,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2623,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,79,extracted field,female,GSE274557:Pt-4,Pt-4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.4999995407581715,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452858,,,train,hesrt,samples/GSE274557/GSM8452858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8452859,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3493,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,79,extracted field,female,GSE274557:Pt-4,Pt-4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36339618107142985,platform_constant,0.4999894283204744,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452859,,,train,hesrt,samples/GSE274557/GSM8452859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452860,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2931,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,84,extracted field,female,GSE274557:Pt-5,Pt-5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000100504532755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452860,,,train,hesrt,samples/GSE274557/GSM8452860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452861,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2772,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,84,extracted field,female,GSE274557:Pt-5,Pt-5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.49999636134732034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452861,,,train,hesrt,samples/GSE274557/GSM8452861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8452862,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2397,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,84,extracted field,female,GSE274557:Pt-5,Pt-5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36230932827735274,platform_constant,0.5000022098220016,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452862,,,train,hesrt,samples/GSE274557/GSM8452862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8452863,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1758,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",age rule: bare number read as years,adult,60,extracted field,male,GSE274557:Pt-6,Pt-6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.362316462433881,platform_constant,0.4999985487332786,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452863,,,train,hesrt,samples/GSE274557/GSM8452863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452864,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2686,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",age rule: bare number read as years,adult,60,extracted field,male,GSE274557:Pt-6,Pt-6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.4999967594302893,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452864,,,train,hesrt,samples/GSE274557/GSM8452864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452865,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2260,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",age rule: bare number read as years,adult,60,extracted field,male,GSE274557:Pt-6,Pt-6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.49999123105793136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452865,,,train,hesrt,samples/GSE274557/GSM8452865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452866,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2660,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",age rule: bare number read as years,adult,60,extracted field,male,GSE274557:Pt-6,Pt-6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.362316462433881,platform_constant,0.49999899616229193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452866,,,train,hesrt,samples/GSE274557/GSM8452866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452867,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3954,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"gemcitabine, ADH1, cisplatin",age rule: bare number read as years,adult,57,extracted field,male,GSE274557:Pt-7,Pt-7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000038501323162,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452867,,,train,hesrt,samples/GSE274557/GSM8452867,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452868,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3435,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"gemcitabine, ADH1, cisplatin",age rule: bare number read as years,adult,57,extracted field,male,GSE274557:Pt-7,Pt-7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36234500327489005,platform_constant,0.500003313116337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452868,,,train,hesrt,samples/GSE274557/GSM8452868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8452869,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2731,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"gemcitabine, ADH1, cisplatin",age rule: bare number read as years,adult,57,extracted field,male,GSE274557:Pt-7,Pt-7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.4999865879944379,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452869,,,train,hesrt,samples/GSE274557/GSM8452869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8452870,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3226,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"gemcitabine, ADH1, cisplatin",age rule: bare number read as years,adult,57,extracted field,male,GSE274557:Pt-7,Pt-7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.362316462433881,platform_constant,0.500000568265801,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452870,,,train,hesrt,samples/GSE274557/GSM8452870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452871,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3952,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, FOLFIRI, Abraxane/Gemcitabine",age rule: bare number read as years,aged,67,extracted field,male,GSE274557:Pt-8,Pt-8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000100504532755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452871,,,train,hesrt,samples/GSE274557/GSM8452871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8452872,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2531,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, FOLFIRI, Abraxane/Gemcitabine",age rule: bare number read as years,aged,67,extracted field,male,GSE274557:Pt-8,Pt-8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000050510198927,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452872,,,train,hesrt,samples/GSE274557/GSM8452872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.9500000000000001}",,
GSM8452873,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2915,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, FOLFIRI, Abraxane/Gemcitabine",age rule: bare number read as years,aged,67,extracted field,male,GSE274557:Pt-8,Pt-8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000128514410137,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452873,,,train,hesrt,samples/GSE274557/GSM8452873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM8452874,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2327,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, FOLFIRI, Abraxane/Gemcitabine",age rule: bare number read as years,aged,67,extracted field,male,GSE274557:Pt-8,Pt-8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.362316462433881,platform_constant,0.500000568265801,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452874,,,train,hesrt,samples/GSE274557/GSM8452874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8452875,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3177,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"Cisplatin, gemcitabine, ADH-1, 5-FU (Clinical trial)",age rule: bare number read as years,adult,60,extracted field,female,GSE274557:Pt-9,Pt-9,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000149990864193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452875,,,train,hesrt,samples/GSE274557/GSM8452875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452876,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2887,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"Cisplatin, gemcitabine, ADH-1, 5-FU (Clinical trial)",age rule: bare number read as years,adult,60,extracted field,female,GSE274557:Pt-9,Pt-9,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.49999911940979325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452876,,,train,hesrt,samples/GSE274557/GSM8452876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8452877,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3271,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"Cisplatin, gemcitabine, ADH-1, 5-FU (Clinical trial)",age rule: bare number read as years,adult,60,extracted field,female,GSE274557:Pt-9,Pt-9,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.4999967901893513,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452877,,,train,hesrt,samples/GSE274557/GSM8452877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8452878,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2169,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"Cisplatin, gemcitabine, ADH-1, 5-FU (Clinical trial)",age rule: bare number read as years,adult,60,extracted field,female,GSE274557:Pt-9,Pt-9,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.362316462433881,platform_constant,0.5000145114779667,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452878,,,train,hesrt,samples/GSE274557/GSM8452878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452879,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2225,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, carboplatin/FOLFOX, gemcitabine/abraxane",age rule: bare number read as years,adult,64,extracted field,male,GSE274557:Pt-10,Pt-10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000035966630161,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452879,,,train,hesrt,samples/GSE274557/GSM8452879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452880,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2686,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, carboplatin/FOLFOX, gemcitabine/abraxane",age rule: bare number read as years,adult,64,extracted field,male,GSE274557:Pt-10,Pt-10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000132927400555,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452880,,,train,hesrt,samples/GSE274557/GSM8452880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8452881,lung,disease,malignant pancreatic neoplasm,lung,metastasis,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1873,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, carboplatin/FOLFOX, gemcitabine/abraxane",age rule: bare number read as years,adult,64,extracted field,male,GSE274557:Pt-10,Pt-10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36363636363636365,platform_constant,0.4999972622691409,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452881,,,train,hesrt,samples/GSE274557/GSM8452881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452882,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2008,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, carboplatin/FOLFOX, gemcitabine/abraxane",age rule: bare number read as years,adult,64,extracted field,male,GSE274557:Pt-10,Pt-10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36225940097871767,platform_constant,0.4999964636307883,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452882,,,train,hesrt,samples/GSE274557/GSM8452882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8452883,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3563,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"gemcitabine, Oxaliplatin, leucovorin-modulated 5-FU, irinotecan,",age rule: bare number read as years,aged,67,extracted field,male,GSE274557:Pt-11,Pt-11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36220236647500226,platform_constant,0.5000070934717877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452883,,,train,hesrt,samples/GSE274557/GSM8452883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452884,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2741,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"gemcitabine, Oxaliplatin, leucovorin-modulated 5-FU, irinotecan,",age rule: bare number read as years,aged,67,extracted field,male,GSE274557:Pt-11,Pt-11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3636339594528438,platform_constant,0.4999995075326099,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452884,,,train,hesrt,samples/GSE274557/GSM8452884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM8452885,lung,disease,malignant pancreatic neoplasm,lung,metastasis,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2635,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"gemcitabine, Oxaliplatin, leucovorin-modulated 5-FU, irinotecan,",age rule: bare number read as years,aged,67,extracted field,male,GSE274557:Pt-11,Pt-11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.362316462433881,platform_constant,0.5000138767150525,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452885,,,train,hesrt,samples/GSE274557/GSM8452885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8452886,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2845,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"gemcitabine, Oxaliplatin, leucovorin-modulated 5-FU, irinotecan,",age rule: bare number read as years,aged,67,extracted field,male,GSE274557:Pt-11,Pt-11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3634825919587946,platform_constant,0.5000044411668702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452886,,,train,hesrt,samples/GSE274557/GSM8452886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.91}",,
GSM8452887,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2892,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,gemcitabine,age rule: bare number read as years,aged,78,extracted field,female,GSE274557:Pt-12,Pt-12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36230932827735274,platform_constant,0.5000143475559576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452887,,,train,hesrt,samples/GSE274557/GSM8452887,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452888,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2123,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,gemcitabine,age rule: bare number read as years,aged,78,extracted field,female,GSE274557:Pt-12,Pt-12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36230932827735274,platform_constant,0.4999907230539818,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452888,,,train,hesrt,samples/GSE274557/GSM8452888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452889,lung,disease,malignant pancreatic neoplasm,lung,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3361,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,gemcitabine,age rule: bare number read as years,aged,78,extracted field,female,GSE274557:Pt-12,Pt-12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36230932827735274,platform_constant,0.4999907230539818,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452889,,,train,hesrt,samples/GSE274557/GSM8452889,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452890,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2696,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,gemcitabine,age rule: bare number read as years,aged,78,extracted field,female,GSE274557:Pt-12,Pt-12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36223325682025953,platform_constant,0.5000146957989255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452890,,,train,hesrt,samples/GSE274557/GSM8452890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8452891,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3073,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",age rule: bare number read as years,aged,82,extracted field,female,GSE274557:Pt-13,Pt-13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.362316462433881,platform_constant,0.4999885772321251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452891,,,train,hesrt,samples/GSE274557/GSM8452891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452892,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2815,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver metastasis,MONDO:1060297;MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",age rule: bare number read as years,aged,82,extracted field,female,GSE274557:Pt-13,Pt-13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.5000095108155265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452892,,,train,hesrt,samples/GSE274557/GSM8452892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8452893,lung,disease,malignant pancreatic neoplasm,lung,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2622,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",age rule: bare number read as years,aged,82,extracted field,female,GSE274557:Pt-13,Pt-13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36231884057971014,platform_constant,0.4999936419356128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452893,,,train,hesrt,samples/GSE274557/GSM8452893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452894,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2160,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",age rule: bare number read as years,aged,82,extracted field,female,GSE274557:Pt-13,Pt-13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36223325682025953,platform_constant,0.5000057348416402,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452894,,,train,hesrt,samples/GSE274557/GSM8452894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8452895,peritoneum,disease,malignant pancreatic neoplasm,peritoneum,metastasis,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2883,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneal metastasis,MONDO:0009831,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",age rule: bare number read as years,aged,82,extracted field,female,GSE274557:Pt-13,Pt-13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36230932827735274,platform_constant,0.5000031942562603,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8452895,,,train,hesrt,samples/GSE274557/GSM8452895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8714177,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,444,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,No treatment,age rule: bare number read as years,aged,89,extracted field,female,GSE274557:Pt-3,Pt-3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.36442993808207597,platform_constant,0.5000051644949799,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714177,,,train,hesrt,samples/GSE274557/GSM8714177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8714178,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,660,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",age rule: bare number read as years,adult,60,extracted field,male,GSE274557:Pt-6,Pt-6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8308846776785371,platform_constant,0.8308846776785371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714178,,,train,hesrt,samples/GSE274557/GSM8714178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714179,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1829,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"gemcitabine, AVN944, erlotinib",age rule: bare number read as years,adult,60,extracted field,male,GSE274557:Pt-6,Pt-6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.8308846776785371,platform_constant,0.8308846776785371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714179,,,train,hesrt,samples/GSE274557/GSM8714179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714180,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1453,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, FOLFIRI, Abraxane/Gemcitabine",age rule: bare number read as years,aged,67,extracted field,male,GSE274557:Pt-8,Pt-8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3726262461981637,platform_constant,0.49998692982712944,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714180,,,train,hesrt,samples/GSE274557/GSM8714180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8714181,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,419,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",age rule: bare number read as years,aged,82,extracted field,female,GSE274557:Pt-13,Pt-13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.35842293906810035,platform_constant,0.49999099439851585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714181,,,train,hesrt,samples/GSE274557/GSM8714181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714182,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1701,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",age rule: bare number read as years,aged,82,extracted field,female,GSE274557:Pt-13,Pt-13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.35842293906810035,platform_constant,0.49999099439851585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714182,,,train,hesrt,samples/GSE274557/GSM8714182,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8714183,other,disease,pancreatic ductal adenocarcinoma,,xenograft,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4339,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,PDX for primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, carboplatin/FOLFOX, gemcitabine/abraxane",age rule: bare number read as years,adult,64,extracted field,male,GSE274557:Pt-10,Pt-10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.2499617275404812,platform_constant,0.4999957924351921,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714183,,,train,hesrt,samples/GSE274557/GSM8714183,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8714184,other,disease,pancreatic ductal adenocarcinoma,,xenograft,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2108,Spatial mapping of transcriptomic and lineage plasticity in metastatic pancreatic cancer,GSE274557,GSE274557,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,PDX for primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"FOLFIRINOX, Capecitabine, gemcitabine/abraxane/ denosumab",age rule: bare number read as years,aged,82,extracted field,female,GSE274557:Pt-13,Pt-13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.24936958011822588,platform_constant,0.49999677407367976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40269162,,GSM8714184,,,train,hesrt,samples/GSE274557/GSM8714184,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.91, ""disease_status"": 0.97, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM8453028,blood vessel,disease,,aorta,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2329,Delineation of a thrombin receptor-stimulated vascular smooth muscle cell transition to a plaque-stabilising fibrous cap-associated state,GSE274572,GSE274572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000947,Plaque section from human aorta,,luna,atherosclerosis,,age rule: age in years,not stated,54 years,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.42231342594175,platform_constant,4.42231342594175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1093/cvr/cvaf112,GSM8453028,,,train,hesrt,samples/GSE274572/GSM8453028,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453029,blood vessel,disease,,aorta,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2497,Delineation of a thrombin receptor-stimulated vascular smooth muscle cell transition to a plaque-stabilising fibrous cap-associated state,GSE274572,GSE274572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000947,Plaque section from human aorta,,luna,atherosclerosis,,age rule: age in years,not stated,54 years,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.422313425941773,platform_constant,4.422313425941773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1093/cvr/cvaf112,GSM8453029,,,train,hesrt,samples/GSE274572/GSM8453029,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453030,blood vessel,disease,,aorta,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2426,Delineation of a thrombin receptor-stimulated vascular smooth muscle cell transition to a plaque-stabilising fibrous cap-associated state,GSE274572,GSE274572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000947,Plaque section from human aorta,,luna,atherosclerosis,,age rule: age in years,not stated,54 years,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.422313425941749,platform_constant,4.422313425941749,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1093/cvr/cvaf112,GSM8453030,,,train,hesrt,samples/GSE274572/GSM8453030,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453031,blood vessel,disease,,aorta,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2470,Delineation of a thrombin receptor-stimulated vascular smooth muscle cell transition to a plaque-stabilising fibrous cap-associated state,GSE274572,GSE274572,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000947,Plaque section from human aorta,,luna,atherosclerosis,,age rule: age in years,not stated,54 years,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.4223134259417725,platform_constant,4.4223134259417725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.1093/cvr/cvaf112,GSM8453031,,,train,hesrt,samples/GSE274572/GSM8453031,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453520,brain,disease,synucleinopathy;Parkinson disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3907,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,GSE274605,GSE274605,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0000510;MONDO:0005180,luna,,PBS injected_D75,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.032613753097282,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453520,,,train,sda-all,samples/GSE274605/GSM8453520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM8453521,brain,disease,synucleinopathy;Parkinson disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3542,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,GSE274605,GSE274605,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0000510;MONDO:0005180,luna,,PBS injected_D75,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.006985100846799,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41736854,,GSM8453521,,,train,sda-all,samples/GSE274605/GSM8453521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8453522,brain,disease,synucleinopathy;Parkinson disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3372,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,GSE274605,GSE274605,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0000510;MONDO:0005180,luna,,PFF injected_D45,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.061166825449159,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453522,,,train,sda-all,samples/GSE274605/GSM8453522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8453523,brain,disease,synucleinopathy;Parkinson disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3198,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,GSE274605,GSE274605,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0000510;MONDO:0005180,luna,,PFF injected_D45,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.044645017166047,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453523,,,train,sda-all,samples/GSE274605/GSM8453523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8453524,brain,disease,synucleinopathy;Parkinson disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3018,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,GSE274605,GSE274605,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0000510;MONDO:0005180,luna,,PFF injected_D45,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.97170824989874,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453524,,,train,sda-all,samples/GSE274605/GSM8453524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8453525,brain,disease,synucleinopathy;Parkinson disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),3627,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,GSE274605,GSE274605,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0000510;MONDO:0005180,luna,,PFF injected_D75,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.006168434863913,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453525,,,train,sda-all,samples/GSE274605/GSM8453525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8453526,brain,disease,synucleinopathy;Parkinson disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),2954,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,GSE274605,GSE274605,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0000510;MONDO:0005180,luna,,PFF injected_D75,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.003189915222444,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453526,,,train,sda-all,samples/GSE274605/GSM8453526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM8453527,brain,disease,synucleinopathy;Parkinson disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),2273,Molecular signatures of altered energy metabolism and circadian rhythm perturbations in a model of synucleinopathy,GSE274605,GSE274605,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0000510;MONDO:0005180,luna,,PFF injected_D75,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.003272830896644,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41736854,,GSM8453527,,,train,sda-all,samples/GSE274605/GSM8453527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8453700,pancreas,disease,cancer,pancreas,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,392164,Single cell transcriptomes of pancreatic pre-invasive lesions and cancer reveal acinar metaplastic cells’ heterogeneity [MERFISH],GSE274617,GSE274617,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001264,Pancreas,MONDO:0004992,luna,,"PTI, Ptf1a-CreER, LSL-Kras-G12D, LSL-tdTomato",luna,adult,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,228,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41758082,,GSM8453700,,,train,sda-all,samples/GSE274617/GSM8453700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8453748,peritoneum,disease,cancer,peritoneum,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,143537,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],GSE274623,GSE274623,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000059084194978,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453748,,,train,sda-all,samples/GSE274623/GSM8453748,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453749,peritoneum,disease,cancer,peritoneum,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,81284,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],GSE274623,GSE274623,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999839523154516,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453749,,,train,sda-all,samples/GSE274623/GSM8453749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8453750,peritoneum,disease,cancer,peritoneum,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,138417,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],GSE274623,GSE274623,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000051627292252,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453750,,,train,sda-all,samples/GSE274623/GSM8453750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453751,peritoneum,disease,cancer,peritoneum,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,46399,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],GSE274623,GSE274623,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453751,,,train,sda-all,samples/GSE274623/GSM8453751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453752,peritoneum,disease,cancer,peritoneum,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,103438,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],GSE274623,GSE274623,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000144675925925,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453752,,,train,sda-all,samples/GSE274623/GSM8453752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453753,peritoneum,disease,cancer,peritoneum,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,164762,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],GSE274623,GSE274623,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49999483556436947,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453753,,,train,sda-all,samples/GSE274623/GSM8453753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8453754,peritoneum,disease,cancer,peritoneum,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,81602,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],GSE274623,GSE274623,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000111968579894,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453754,,,train,sda-all,samples/GSE274623/GSM8453754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8453755,peritoneum,disease,cancer,peritoneum,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,46807,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PM],GSE274623,GSE274623,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000011456328476,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8453755,,,train,sda-all,samples/GSE274623/GSM8453755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8454077,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1408,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,GSE274641,GSE274641,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Embryo,,luna,Normal,Patho-DBiT Protocol,luna,embryonic,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,spot,21093,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39353436,,GSM8454077,,,train,sda-all,samples/GSE274641/GSM8454077,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.67, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8454078,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1369,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,GSE274641,GSE274641,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Embryo,,luna,Normal,Patho-DBiT Protocol,luna,embryonic,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,spot,25201,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,39353436,,GSM8454078,,,train,sda-all,samples/GSE274641/GSM8454078,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8454079,lymph node,normal,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2003,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,GSE274641,GSE274641,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,Lymph node,,luna,Normal,Patho-DBiT Protocol,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,spot,25047,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,39353436,,GSM8454079,,,train,sda-all,samples/GSE274641/GSM8454079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8454080,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,1455,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,GSE274641,GSE274641,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,Normal,Patho-DBiT Protocol,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,spot,25104,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,39353436,,GSM8454080,,,train,sda-all,samples/GSE274641/GSM8454080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8454081,lymph node,disease,lymph node disorder;lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2497,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,GSE274641,GSE274641,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,Lymph node,MONDO:0004928;MONDO:0005062,luna,Lymphoma,Patho-DBiT Protocol,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,spot,26397,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,39353436,,GSM8454081,,,train,sda-all,samples/GSE274641/GSM8454081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454082,lymph node,disease,lymph node disorder;lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,8632,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,GSE274641,GSE274641,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,Lymph node,MONDO:0004928;MONDO:0005062,luna,Lymphoma,Patho-DBiT Protocol,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,spot,67517,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,39353436,,GSM8454082,,,train,sda-all,samples/GSE274641/GSM8454082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454083,lymph node,normal,,lymph node,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2365,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,GSE274641,GSE274641,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,Lymph node,,luna,Normal,Patho-DBiT Protocol,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,spot,25735,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,39353436,,GSM8454083,,,train,sda-all,samples/GSE274641/GSM8454083,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454084,lymph node,disease,lymph node disorder;diffuse large B-cell lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2116,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,GSE274641,GSE274641,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,Lymph node,MONDO:0004928;MONDO:0018905,luna,Lymphoma,Patho-DBiT Protocol,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,spot,26147,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,39353436,,GSM8454084,,,train,sda-all,samples/GSE274641/GSM8454084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8454085,lymph node,disease,lymph node disorder;diffuse large B-cell lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2170,Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues,GSE274641,GSE274641,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,Lymph node,MONDO:0004928;MONDO:0018905,luna,Lymphoma,Patho-DBiT Protocol,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,spot,25172,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,39353436,,GSM8454085,,,train,sda-all,samples/GSE274641/GSM8454085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454234,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,1534,Spatial transcriptomics for platinum-resistant high-grade serous ovarian carcinoma,GSE274657,GSE274657+GSE274659,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,ovarian cancer,MONDO:0005140,luna,high-grade serous ovarian carcinoma,JAK1_high,age rule: bare number read as years,adult,60,not stated,,GSE274657:Patient_2,Patient_2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.5903003297938754,platform_constant,3.5903003297938754,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40883550,,GSM8454234,,,train,hesrt,samples/GSE274657/GSM8454234,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM8454235,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,4116,Spatial transcriptomics for platinum-resistant high-grade serous ovarian carcinoma,GSE274657,GSE274657+GSE274659,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,ovarian cancer,MONDO:0005140,luna,high-grade serous ovarian carcinoma,JAK1_high,age rule: bare number read as years,adult,58,not stated,,GSE274657:Patient_8,Patient_8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.785282332147371,platform_constant,4.785282332147371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40883550,,GSM8454235,,,train,hesrt,samples/GSE274657/GSM8454235,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8454236,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,4592,Spatial transcriptomics for platinum-resistant high-grade serous ovarian carcinoma,GSE274657,GSE274657+GSE274659,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,ovarian cancer,MONDO:0005140,luna,high-grade serous ovarian carcinoma,JAK1_low,age rule: bare number read as years,adult,43,not stated,,GSE274657:Patient_16,Patient_16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.315563969495602,platform_constant,7.315563969495602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40883550,,GSM8454236,,,train,hesrt,samples/GSE274657/GSM8454236,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM8454237,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,4992,Spatial transcriptomics for platinum-resistant high-grade serous ovarian carcinoma,GSE274657,GSE274657+GSE274659,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,ovarian cancer,MONDO:0005140,luna,high-grade serous ovarian carcinoma,JAK1_low,age rule: bare number read as years,aged,69,not stated,,GSE274657:Patient_17,Patient_17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.315038519907406,platform_constant,7.315038519907406,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40883550,,GSM8454237,,,train,hesrt,samples/GSE274657/GSM8454237,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8454387,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2234,Differential Activity of MAPK signalling Defines Fibroblast Subtypes in Pancreatic Cancer (Spatial Transcriptomics),GSE274665,GSE246459+GSE274665,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.881172164031463,platform_constant,4.881172164031463,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627211,,GSM8454387,,,train,hesrt,samples/GSE274665/GSM8454387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8454388,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4118,Differential Activity of MAPK signalling Defines Fibroblast Subtypes in Pancreatic Cancer (Spatial Transcriptomics),GSE274665,GSE246459+GSE274665,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.875520484156295,platform_constant,4.875520484156295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627211,,GSM8454388,,,train,hesrt,samples/GSE274665/GSM8454388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8454389,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2932,Differential Activity of MAPK signalling Defines Fibroblast Subtypes in Pancreatic Cancer (Spatial Transcriptomics),GSE274665,GSE246459+GSE274665,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.438143042897383,platform_constant,4.438143042897383,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627211,,GSM8454389,,,train,hesrt,samples/GSE274665/GSM8454389,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454390,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3966,Differential Activity of MAPK signalling Defines Fibroblast Subtypes in Pancreatic Cancer (Spatial Transcriptomics),GSE274665,GSE246459+GSE274665,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.433568913264562,platform_constant,4.433568913264562,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39627211,,GSM8454390,,,train,hesrt,samples/GSE274665/GSM8454390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454446,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,166982,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],GSE274673,GSE274673,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic ductal adenocarcinoma (PDAC),MONDO:0005184,luna,Pancreatic ductal adenocarcinoma (PDAC),treatment-naïve,luna,not stated,,not stated,,GSE274673:Patient 1,Patient 1,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000125502008033,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454446,,,train,sda-all,samples/GSE274673/GSM8454446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454447,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,97229,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],GSE274673,GSE274673,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic ductal adenocarcinoma (PDAC),MONDO:0005184,luna,Pancreatic ductal adenocarcinoma (PDAC),chemoradiotherapy-treated,luna,not stated,,not stated,,GSE274673:Patient 2,Patient 2,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49999187063970674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454447,,,train,sda-all,samples/GSE274673/GSM8454447,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454448,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,28375,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],GSE274673,GSE274673,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic ductal adenocarcinoma (PDAC),MONDO:0005184,luna,Pancreatic ductal adenocarcinoma (PDAC),chemoradiotherapy-treated,luna,not stated,,not stated,,GSE274673:Patient 3,Patient 3,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999931394072447,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454448,,,train,sda-all,samples/GSE274673/GSM8454448,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454449,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,102797,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],GSE274673,GSE274673,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic ductal adenocarcinoma (PDAC),MONDO:0005184,luna,Pancreatic ductal adenocarcinoma (PDAC),treatment-naïve,luna,not stated,,not stated,,GSE274673:Patient 4,Patient 4,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454449,,,train,sda-all,samples/GSE274673/GSM8454449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454450,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,273201,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],GSE274673,GSE274673,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic ductal adenocarcinoma (PDAC),MONDO:0005184,luna,Pancreatic ductal adenocarcinoma (PDAC),treatment-naïve,luna,not stated,,not stated,,GSE274673:Patient 5,Patient 5,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000025815778604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454450,,,train,sda-all,samples/GSE274673/GSM8454450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8454451,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,42116,Single-cell resolution spatial analysis of antigen-presenting cancer-associated fibroblast niches [Xenium PDAC],GSE274673,GSE274673,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic ductal adenocarcinoma (PDAC),MONDO:0005184,luna,Pancreatic ductal adenocarcinoma (PDAC),chemoradiotherapy-treated,luna,not stated,,not stated,,GSE274673:Patient 6,Patient 6,FFPE,FFPE,release v3,imaging-based,Xenium,hPancreas_480g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8454451,,,train,sda-all,samples/GSE274673/GSM8454451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455199,brain,disease,glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4180,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,GSE274697,GSE274697,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0018177,luna,,GBM,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.12046255811988,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain has some problems,41559043,,GSM8455199,,,val,sda-all,samples/GSE274697/GSM8455199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455200,brain,disease,glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3954,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,GSE274697,GSE274697,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0018177,luna,,GBM,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.261251954141597,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain has some problems,41559043,,GSM8455200,,,val,sda-all,samples/GSE274697/GSM8455200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455201,brain,disease,glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4362,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,GSE274697,GSE274697,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0018177,luna,,GBM,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.525835186226113,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain has some problems,41559043,,GSM8455201,,,val,sda-all,samples/GSE274697/GSM8455201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455202,brain,disease,glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4019,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,GSE274697,GSE274697,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0018177,luna,,GBM+IF,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.332183001037512,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41559043,,GSM8455202,,,val,sda-all,samples/GSE274697/GSM8455202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455203,brain,disease,glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3786,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,GSE274697,GSE274697,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0018177,luna,,GBM+IF,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.6973764882012095,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41559043,,GSM8455203,,,val,sda-all,samples/GSE274697/GSM8455203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8455204,brain,disease,glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3894,The Mechanism Study of Intermittent Fasting in Glioblastoma Suppression via Gut Microbiota-mediated m6A Modification,GSE274697,GSE274697,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0018177,luna,,GBM+IF,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.568355332286101,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,41559043,,GSM8455204,,,val,sda-all,samples/GSE274697/GSM8455204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457566,lung,disease,infectious disease,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2218,Spatial Transcriptomics of Lungs Infected with Coccidioides posadasii,GSE274767,GSE274767,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005550,luna,,Day 0,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39611685,10.1128/mbio.02562-24,GSM8457566,,,val,hesrt,samples/GSE274767/GSM8457566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457567,lung,disease,infectious disease,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3982,Spatial Transcriptomics of Lungs Infected with Coccidioides posadasii,GSE274767,GSE274767,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005550,luna,,Day 14,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,7.1428567857142955,platform_constant,7.1428567857142955,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39611685,10.1128/mbio.02562-24,GSM8457567,,,val,hesrt,samples/GSE274767/GSM8457567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457833,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2349,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,iTBS,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.400262376240797,platform_constant,4.400262376240797,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457833,,,train,hesrt,samples/GSE274782/GSM8457833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8457834,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2162,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,cTBS,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.410406430999422,platform_constant,4.410406430999422,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457834,,,train,hesrt,samples/GSE274782/GSM8457834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8457835,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2225,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sham,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.409465345055363,platform_constant,4.409465345055363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457835,,,train,hesrt,samples/GSE274782/GSM8457835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457836,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2257,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sham,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.400262376240819,platform_constant,4.400262376240819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457836,,,train,hesrt,samples/GSE274782/GSM8457836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8457837,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1592,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,cTBS,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.342184753681936,platform_constant,4.342184753681936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457837,,,train,hesrt,samples/GSE274782/GSM8457837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457838,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2129,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,iTBS,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.410243883893371,platform_constant,4.410243883893371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457838,,,train,hesrt,samples/GSE274782/GSM8457838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8457839,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1871,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sham,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.411493162156672,platform_constant,4.411493162156672,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457839,,,train,hesrt,samples/GSE274782/GSM8457839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8457840,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2082,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,cTBS,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.409827690667172,platform_constant,4.409827690667172,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457840,,,train,hesrt,samples/GSE274782/GSM8457840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8457841,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2142,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,iTBS,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.40652784225494,platform_constant,4.40652784225494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457841,,,train,hesrt,samples/GSE274782/GSM8457841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8457842,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1609,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,sham,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.347282542040089,platform_constant,4.347282542040089,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457842,,,train,hesrt,samples/GSE274782/GSM8457842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8457843,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1895,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,iTBS,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.3434191827962705,platform_constant,4.3434191827962705,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457843,,,train,hesrt,samples/GSE274782/GSM8457843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8457844,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2125,Spatially profiling the molecular effects of repetitive transcranial magnetic stimulation in aged rodent brains.,GSE274782,GSE274782,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,cTBS,age rule: age with unit,aged,57–72 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.343177555359486,platform_constant,4.343177555359486,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40888470,,GSM8457844,,,train,hesrt,samples/GSE274782/GSM8457844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8463210,lung,normal,,lung,primary tissue,Gallus gallus,chicken,fetal,unknown,Stereo-seq,Stereo-seq,False,,315012,Morphogenic accommodations for unidirectional airflow in the chicken lung,GSE274970,GSE274970,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,luna,UBERON:0002048,E20 lung,,luna,,Leghorn,luna,fetal,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,27771,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8463210,,,train,sda-all,samples/GSE274970/GSM8463210,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM8464544,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,112993,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,GSE275026,GSE275026,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,Cx3cr1CreErt2/+(Litt),age rule: age with unit,adult,8 months,extracted field,M,,,,,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41193812,,GSM8464544,,,val,sda-all,samples/GSE275026/GSM8464544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8464545,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,120378,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,GSE275026,GSE275026,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,Cx3cr1CreErt2/+(Litt); 5xFAD,age rule: age with unit,adult,8 months,extracted field,M,,,,,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41193812,,GSM8464545,,,val,sda-all,samples/GSE275026/GSM8464545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8464546,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,103501,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,GSE275026,GSE275026,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,Cx3cr1CreErt2/+(Litt); 5xFAD,age rule: age with unit,adult,10 months,extracted field,M,,,,,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41193812,,GSM8464546,,,val,sda-all,samples/GSE275026/GSM8464546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8464547,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,124048,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,GSE275026,GSE275026,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,5xFAD; Cx3cr1CreErt2/+(Litt);Spi1fl/+,age rule: age with unit,adult,10 months,extracted field,M,,,,,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41193812,,GSM8464547,,,val,sda-all,samples/GSE275026/GSM8464547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8464548,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,113880,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,GSE275026,GSE275026,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,5xFAD; Cx3cr1CreErt2/+(Litt);R26FLAG-Spi1/+,age rule: age with unit,adult,8 months,extracted field,M,,,,,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41193812,,GSM8464548,,,val,sda-all,samples/GSE275026/GSM8464548,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8970742,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,126024,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,GSE275026,GSE275026,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,Cx3cr1CreErt2/+(Litt),age rule: age with unit,adult,12 months,extracted field,M,,,,,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41193812,,GSM8970742,,,val,sda-all,samples/GSE275026/GSM8970742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8970743,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,131251,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,GSE275026,GSE275026,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,Cx3cr1CreErt2/+(Litt); 5xFAD,age rule: age with unit,adult,11 months,extracted field,M,,,,,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41193812,,GSM8970743,,,val,sda-all,samples/GSE275026/GSM8970743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8970744,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,120318,Plaque-induced transcriptional reprogramming of microglia towards lymphoid receptor expression protects against Alzheimer’s disease.,GSE275026,GSE275026,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,5xFAD; Cx3cr1CreErt2/+(Litt);Spi1fl/+,age rule: age with unit,adult,13 months,extracted field,M,,,,,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41193812,,GSM8970744,,,val,sda-all,samples/GSE275026/GSM8970744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8465980,lymph node,normal,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1650,Specific pre-plasma cell states and local proliferation at the dark zone – medulla interface characterize germinal center-derived plasma cell differentiation in lymph node (Figure 6),GSE275125,GSE275125,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,Lymph node,,luna,,,luna,not stated,,not stated,,GSE275125:JLB6J8116,JLB6J8116,,,release v3,sequencing-based,Visium,,,spot,32378,counts,um,1.0,verified,0.6578947368421053,DEPOSITED_ALIGNMENT_FIT,,,,,VERIFIED,,,,,,GSM8465980,,,train,sda-all,samples/GSE275125/GSM8465980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8465981,lymph node,normal,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1876,Specific pre-plasma cell states and local proliferation at the dark zone – medulla interface characterize germinal center-derived plasma cell differentiation in lymph node (Figure 6),GSE275125,GSE275125,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,Lymph node,,luna,,,luna,not stated,,not stated,,GSE275125:JLB6J8116,JLB6J8116,,,release v3,sequencing-based,Visium,,,spot,32378,counts,um,1.0,verified,0.6578947368421053,DEPOSITED_ALIGNMENT_FIT,,,,,VERIFIED,,,,,,GSM8465981,,,train,sda-all,samples/GSE275125/GSM8465981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8465982,lymph node,normal,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1858,Specific pre-plasma cell states and local proliferation at the dark zone – medulla interface characterize germinal center-derived plasma cell differentiation in lymph node (Figure 6),GSE275125,GSE275125,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,Lymph node,,luna,,,luna,not stated,,not stated,,GSE275125:JLB6J8116,JLB6J8116,,,release v3,sequencing-based,Visium,,,spot,32378,counts,um,1.0,verified,0.7352941176470589,DEPOSITED_ALIGNMENT_FIT,,,,,VERIFIED,,,,,,GSM8465982,,,train,sda-all,samples/GSE275125/GSM8465982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8465983,lymph node,normal,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1887,Specific pre-plasma cell states and local proliferation at the dark zone – medulla interface characterize germinal center-derived plasma cell differentiation in lymph node (Figure 6),GSE275125,GSE275125,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,Lymph node,,luna,,,luna,not stated,,not stated,,GSE275125:JLB6J8116,JLB6J8116,,,release v3,sequencing-based,Visium,,,spot,32378,counts,um,1.0,verified,0.6711409395973155,DEPOSITED_ALIGNMENT_FIT,,,,,VERIFIED,,,,,,GSM8465983,,,train,sda-all,samples/GSE275125/GSM8465983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8471249,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,2934,Effects of inhibiting stearoyl-CoA desaturase (SCD) on the spatial transcriptome in a mouse model of Alzheimer's disease (AD),GSE275131,GSE275131,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control (DMSO; 0.11 ul/hour infusion rate) - WT,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.355401436942718,platform_constant,4.355401436942718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41539386,10.1016/j.neuropharm.2026.110835,GSM8471249,,,test,hesrt,samples/GSE275131/GSM8471249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8471250,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3080,Effects of inhibiting stearoyl-CoA desaturase (SCD) on the spatial transcriptome in a mouse model of Alzheimer's disease (AD),GSE275131,GSE275131,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,Control (DMSO; 0.11 ul/hour infusion rate) - 3xTg,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.761410998503646,platform_constant,4.761410998503646,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41539386,10.1016/j.neuropharm.2026.110835,GSM8471250,,,test,hesrt,samples/GSE275131/GSM8471250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8471251,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,2789,Effects of inhibiting stearoyl-CoA desaturase (SCD) on the spatial transcriptome in a mouse model of Alzheimer's disease (AD),GSE275131,GSE275131,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Stearoyl-CoA desaturase inhibitor (SCDi; 80 uM) - WT,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.53387806511062,platform_constant,4.53387806511062,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41539386,10.1016/j.neuropharm.2026.110835,GSM8471251,,,test,hesrt,samples/GSE275131/GSM8471251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8471252,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3126,Effects of inhibiting stearoyl-CoA desaturase (SCD) on the spatial transcriptome in a mouse model of Alzheimer's disease (AD),GSE275131,GSE275131,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,Alzheimer's disease,Stearoyl-CoA desaturase inhibitor (SCDi; 80 uM) - 3xTg,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.708342708720574,platform_constant,4.708342708720574,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41539386,10.1016/j.neuropharm.2026.110835,GSM8471252,,,test,hesrt,samples/GSE275131/GSM8471252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8471388,small intestine,disease,Crohn disease,wall of intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2422,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Visium],GSE275144,GSE275144,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001262,Intestinal Stricture,MONDO:0005011,luna,Crohn's disease,Intestinal Stricture,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.804783733096434,platform_constant,4.804783733096434,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967215,,GSM8471388,,,train,hesrt,samples/GSE275144/GSM8471388,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8471389,small intestine,disease,Crohn disease,wall of intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1630,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Visium],GSE275144,GSE275144,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001262,Intestinal Stricture,MONDO:0005011,luna,Crohn's disease,Intestinal Stricture,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.806691810516939,platform_constant,4.806691810516939,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40967215,,GSM8471389,,,train,hesrt,samples/GSE275144/GSM8471389,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8472671,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2757,Spatial Transcriptomics of Brains Infected with VEEV,GSE275201,GSE275201,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Uninfected controls,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39749347,,GSM8472671,,,val,hesrt,samples/GSE275201/GSM8472671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8472672,brain,disease,infectious disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2798,Spatial Transcriptomics of Brains Infected with VEEV,GSE275201,GSE275201,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0005550,luna,,Infected with VEEV,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39749347,,GSM8472672,,,val,hesrt,samples/GSE275201/GSM8472672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8473629,bone,perturbation,,hindlimb,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1852,The G Protein-Coupled Receptor ADGRG6 Maintains Mouse Growth Plate Homeostasis by Negatively Regulating IHH Signaling,GSE275252,GSE275252,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002103,hindlimb,,luna,,WT & Adgrg6 mutant,age rule: postnatal day,not stated,20 postnatal days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.788324088563911,platform_constant,4.788324088563911,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39236220,,GSM8473629,,,train,hesrt,samples/GSE275252/GSM8473629,sda-tissue-disease-2.3,"{""organ"": 0.47000000000000003, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.92, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8476393,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3645,Visium Spatial Transcriptomics of IPMN model mice with Kras;Gnas mutation,GSE275405,GSE275405+GSE275406,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0004286,luna,,normal feed,luna,adult,5 Months 7 days,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,14.921828364186497,platform_constant,14.921828364186497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39277181,,GSM8476393,,,train,hesrt,samples/GSE275405/GSM8476393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8476394,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,4047,Visium Spatial Transcriptomics of IPMN model mice with Kras;Gnas mutation,GSE275405,GSE275405+GSE275406,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0004286,luna,,normal feed,luna,adult,5 Months 7 days,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,8.463687503554567,platform_constant,8.463687503554567,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39277181,,GSM8476394,,,train,hesrt,samples/GSE275405/GSM8476394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8476395,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3677,Visium Spatial Transcriptomics of IPMN model mice with Kras;Gnas mutation,GSE275405,GSE275405+GSE275406,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0004286,luna,,doxycycline feed,luna,adult,5 Months 4 days,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,8.911183380186221,platform_constant,8.911183380186221,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39277181,,GSM8476395,,,train,hesrt,samples/GSE275405/GSM8476395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8476396,pancreas,disease,pancreatic intraductal papillary-mucinous neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3236,Visium Spatial Transcriptomics of IPMN model mice with Kras;Gnas mutation,GSE275405,GSE275405+GSE275406,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0004286,luna,,doxycycline feed,luna,adult,5 Months 4 days,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,9.696456075364956,platform_constant,9.696456075364956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39277181,,GSM8476396,,,train,hesrt,samples/GSE275405/GSM8476396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8480469,adipose tissue,normal,,visceral abdominal adipose tissue,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2334,Novel cell-to-cell communications between macrophages and fibroblasts regulate obesity-induced adipose tissue fibrosis [spatial transcriptomics],GSE275590,GSE275590,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0014454,visceral adipose tissue,,luna,,"standard diet, 36 weeks",luna,adult,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.3625354682456265,platform_constant,4.3625354682456265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40063503,10.2337/db24-0762,GSM8480469,,,train,hesrt,samples/GSE275590/GSM8480469,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM8480470,adipose tissue,disease,obesity disorder,visceral abdominal adipose tissue,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3769,Novel cell-to-cell communications between macrophages and fibroblasts regulate obesity-induced adipose tissue fibrosis [spatial transcriptomics],GSE275590,GSE275590,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0014454,visceral adipose tissue,MONDO:0011122,luna,,"high-fat diet, 36 weeks",luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.278846175240398,platform_constant,4.278846175240398,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40063503,10.2337/db24-0762,GSM8480470,,,train,hesrt,samples/GSE275590/GSM8480470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8488517,peripheral nerve,perturbation,,cranial nerve II,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,11148,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,GSE275954,GSE275954,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000941,Optic Nerves,,luna,,PLX5622,age rule: age with unit,aged,Aging; 24 mounths,extracted field,Male,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488517,,,train,sda-all,samples/GSE275954/GSM8488517,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488518,peripheral nerve,perturbation,,cranial nerve II,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,24469,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,GSE275954,GSE275954,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000941,Optic Nerves,,luna,,PLX5622,age rule: age with unit,aged,Aging; 24 mounths,extracted field,Male,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488518,,,train,sda-all,samples/GSE275954/GSM8488518,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488519,peripheral nerve,perturbation,,cranial nerve II,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,20449,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,GSE275954,GSE275954,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000941,Optic Nerves,,luna,,PLX5622,age rule: age with unit,aged,Aging; 24 mounths,extracted field,Male,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488519,,,train,sda-all,samples/GSE275954/GSM8488519,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488520,peripheral nerve,normal,,cranial nerve II,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERFISH,False,,6274,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,GSE275954,GSE275954,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000941,Optic Nerves,,luna,,control food,luna,adult,Adult; 12 mounths,extracted field,Male,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488520,,,train,sda-all,samples/GSE275954/GSM8488520,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488521,peripheral nerve,normal,,cranial nerve II,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,4676,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,GSE275954,GSE275954,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000941,Optic Nerves,,luna,,control food,age rule: age with unit,aged,Aging; 24 mounths,extracted field,Male,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488521,,,train,sda-all,samples/GSE275954/GSM8488521,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488522,peripheral nerve,normal,,cranial nerve II,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERFISH,False,,865,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,GSE275954,GSE275954,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000941,Optic Nerves,,luna,,control food,luna,adult,Adult; 12 mounths,extracted field,Male,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488522,,,train,sda-all,samples/GSE275954/GSM8488522,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488523,peripheral nerve,normal,,cranial nerve II,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,3361,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,GSE275954,GSE275954,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000941,Optic Nerves,,luna,,control food,age rule: age with unit,aged,Aging; 24 mounths,extracted field,Male,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488523,,,train,sda-all,samples/GSE275954/GSM8488523,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8488524,peripheral nerve,perturbation,,cranial nerve II,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,4939,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,GSE275954,GSE275954,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000941,Optic Nerves,,luna,,PLX5622,age rule: age with unit,aged,Aging; 24 mounths,extracted field,Male,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488524,,,train,sda-all,samples/GSE275954/GSM8488524,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8488527,peripheral nerve,perturbation,,cranial nerve II,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,6951,Microglia activation orchestrates CXCL10-mediated CD8+ T cell recruitment to promote aging-related white matter degeneration,GSE275954,GSE275954,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000941,Optic Nerves,,luna,,PLX5622,age rule: age with unit,aged,Aging; 24 mounths,extracted field,Male,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,40404995,,GSM8488527,,,train,sda-all,samples/GSE275954/GSM8488527,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490672,lung,disease,mycobacterial infectious disease,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,87095,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,GSE276083,GSE276083,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,mycobacteria-infected lung tissue,MONDO:0020590,luna,MTB,,age rule: bare number read as years,adult,49,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490672,,,train,sda-all,samples/GSE276083/GSM8490672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490673,lung,disease,mycobacterial infectious disease,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,39986,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,GSE276083,GSE276083,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,mycobacteria-infected lung tissue,MONDO:0020590,luna,NTM,,age rule: bare number read as years,aged,71,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490673,,,train,sda-all,samples/GSE276083/GSM8490673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490674,lung,disease,mycobacterial infectious disease,lung,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,39571,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,GSE276083,GSE276083,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,mycobacteria-infected lung tissue,MONDO:0020590,luna,NTM,,age rule: bare number read as years,adult,51,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490674,,,train,sda-all,samples/GSE276083/GSM8490674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490675,lung,disease,mycobacterial infectious disease,lung,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,49910,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,GSE276083,GSE276083,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,mycobacteria-infected lung tissue,MONDO:0020590,luna,MTB,,age rule: bare number read as years,aged,70,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490675,,,train,sda-all,samples/GSE276083/GSM8490675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490676,lung,disease,mycobacterial infectious disease,lung,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,45717,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,GSE276083,GSE276083,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,mycobacteria-infected lung tissue,MONDO:0020590,luna,MTB,,age rule: bare number read as years,adult,64,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490676,,,train,sda-all,samples/GSE276083/GSM8490676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490677,lung,disease,mycobacterial infectious disease,lung,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,62491,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,GSE276083,GSE276083,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,mycobacteria-infected lung tissue,MONDO:0020590,luna,NTM,,age rule: bare number read as years,adult,56,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490677,,,train,sda-all,samples/GSE276083/GSM8490677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8490678,lung,disease,mycobacterial infectious disease,lung,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,52676,Single cell spatial transcriptome and RNA-seq analysis in human lung tissues with mycobacterial infection: Single cell spatial transcriptome,GSE276083,GSE276083,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,mycobacteria-infected lung tissue,MONDO:0020590,luna,NTM,,age rule: bare number read as years,adult,63,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM8490678,,,train,sda-all,samples/GSE276083/GSM8490678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8494455,skin,disease,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,295245,Mouse Skin Xenium In Situ Spatial Gene Expression,GSE276273,GSE276273,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,MmuPV1,luna,not stated,,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999137415466705,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,39672169,,GSM8494455,,,train,sda-all,samples/GSE276273/GSM8494455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8500534,lymph node,disease,diffuse large B-cell lymphoma;large B-cell lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3384,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,GSE276542,GSE276542,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,lymph node,MONDO:0018905;MONDO:0968974,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.319136050715769,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500534,,,train,sda-all,samples/GSE276542/GSM8500534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8500535,tonsil,disease,diffuse large B-cell lymphoma;large B-cell lymphoma,tonsil,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3318,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,GSE276542,GSE276542,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002372,tonsil,MONDO:0018905;MONDO:0968974,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.323414332541781,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500535,,,train,sda-all,samples/GSE276542/GSM8500535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.32, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8500536,unknown,disease,diffuse large B-cell lymphoma;large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1197,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,GSE276542,GSE276542,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL biopsies,MONDO:0018905;MONDO:0968974,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.324173730530275,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500536,,,train,sda-all,samples/GSE276542/GSM8500536,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8500537,unknown,disease,diffuse large B-cell lymphoma;large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1723,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,GSE276542,GSE276542,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL biopsies,MONDO:0018905;MONDO:0968974,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.502847217991357,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500537,,,train,sda-all,samples/GSE276542/GSM8500537,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8500538,unknown,disease,diffuse large B-cell lymphoma;large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1827,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,GSE276542,GSE276542,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL biopsies,MONDO:0018905;MONDO:0968974,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.8206545925621067,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500538,,,train,sda-all,samples/GSE276542/GSM8500538,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8500539,unknown,disease,diffuse large B-cell lymphoma;large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4992,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,GSE276542,GSE276542,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL resection,MONDO:0018905;MONDO:0968974,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.004534803968728,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500539,,,train,sda-all,samples/GSE276542/GSM8500539,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8500540,unknown,disease,diffuse large B-cell lymphoma;large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4992,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,GSE276542,GSE276542,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL resection,MONDO:0018905;MONDO:0968974,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.923332635762713,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500540,,,train,sda-all,samples/GSE276542/GSM8500540,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8500541,lymph node,disease,diffuse large B-cell lymphoma;large B-cell lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4674,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,GSE276542,GSE276542,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,lymph node,MONDO:0018905;MONDO:0968974,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.912354148114175,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500541,,,train,sda-all,samples/GSE276542/GSM8500541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8500542,tonsil,disease,diffuse large B-cell lymphoma;large B-cell lymphoma,tonsil,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4923,Spatial transcriptomics characterization of ecosystems in the immune tumor microenvironment of diffuse large B-cell lymphoma,GSE276542,GSE276542,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002372,tonsil,MONDO:0018905;MONDO:0968974,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.8665118377579377,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42010788,,GSM8500542,,,train,sda-all,samples/GSE276542/GSM8500542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.58, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8506649,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4501,Distinct Myeloid Derived Suppressor Cell Populations in Human Glioblastoma,GSE276841,GSE276841,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,glioblastoma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.012246384262355,platform_constant,10.012246384262355,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39818911,,GSM8506649,,,train,hesrt,samples/GSE276841/GSM8506649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8506650,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3128,Distinct Myeloid Derived Suppressor Cell Populations in Human Glioblastoma,GSE276841,GSE276841,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,glioblastoma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,11.727189033715637,platform_constant,11.727189033715637,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39818911,,GSM8506650,,,train,hesrt,samples/GSE276841/GSM8506650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8507225,small intestine,disease,,small intestine,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,4975,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,GSE276866,GSE276866,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,Proximal Small Intestine,,luna,,ApcMin/+,age rule: age with unit,adult,13 weeks,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,56953,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507225,,,test,sda-all,samples/GSE276866/GSM8507225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8507226,small intestine,disease,,ileum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,4973,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,GSE276866,GSE276866,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,ApcMin/+,age rule: age with unit,adult,13 weeks,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,56953,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507226,,,test,sda-all,samples/GSE276866/GSM8507226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8507227,colon,disease,,large intestine,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,4810,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,GSE276866,GSE276866,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000059,Large Intestine,,luna,,ApcMin/+,age rule: age with unit,adult,13 weeks,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,56953,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507227,,,test,sda-all,samples/GSE276866/GSM8507227,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.98, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8507228,colon,disease,,caecum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,4887,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,GSE276866,GSE276866,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001153,Cecum,,luna,,ApcMin/+,age rule: age with unit,adult,13 weeks,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,56953,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507228,,,test,sda-all,samples/GSE276866/GSM8507228,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8507229,small intestine,disease,,small intestine,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,4991,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,GSE276866,GSE276866,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,Proximal Small Intestine,,luna,,ApcMin/+,age rule: age with unit,adult,13 weeks,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,56953,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507229,,,test,sda-all,samples/GSE276866/GSM8507229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8507230,small intestine,disease,,ileum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,4986,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,GSE276866,GSE276866,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,ApcMin/+,age rule: age with unit,adult,13 weeks,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,56953,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507230,,,test,sda-all,samples/GSE276866/GSM8507230,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8507231,colon,disease,,large intestine,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,4992,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,GSE276866,GSE276866,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000059,Large Intestine,,luna,,ApcMin/+,age rule: age with unit,adult,13 weeks,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,56953,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507231,,,test,sda-all,samples/GSE276866/GSM8507231,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8507232,colon,disease,,caecum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,False,,4966,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing,GSE276866,GSE276866,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001153,Cecum,,luna,,ApcMin/+,age rule: age with unit,adult,13 weeks,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,56953,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM8507232,,,test,sda-all,samples/GSE276866/GSM8507232,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.85, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8509590,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,702244,Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis [Visium],GSE276934,GSE276934,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,pulmonary fibrosis,luna,not stated,,not stated,,GSE276934:IPFTMA5,IPFTMA5,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8509590,,,train,hesrt,samples/GSE276934/GSM8509590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513009,brain,normal,,midbrain,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,640,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,embryonic,7 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.2980061799351175,platform_constant,4.2980061799351175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513009,,,test,hesrt,samples/GSE277032/GSM8513009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.92}",,
GSM8513010,brain,normal,,midbrain,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,749,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,embryonic,7 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.133773034117596,platform_constant,4.133773034117596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513010,,,test,hesrt,samples/GSE277032/GSM8513010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM8513011,brain,normal,,midbrain,primary tissue,Homo sapiens,human,embryonic,unknown,Visium,Visium,True,H&E,927,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,embryonic,7 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.2745233740896,platform_constant,4.2745233740896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513011,,,test,hesrt,samples/GSE277032/GSM8513011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM8513012,brain,normal,,midbrain,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,2102,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.20578992269273,platform_constant,4.20578992269273,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513012,,,test,hesrt,samples/GSE277032/GSM8513012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513013,brain,normal,,midbrain,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,2551,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.210422014328904,platform_constant,4.210422014328904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513013,,,test,hesrt,samples/GSE277032/GSM8513013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513014,brain,normal,,midbrain,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1370,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,fetal,11 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.580458960995122,platform_constant,4.580458960995122,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513014,,,test,hesrt,samples/GSE277032/GSM8513014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8513015,brain,normal,,midbrain,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1346,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.082835485310435,platform_constant,4.082835485310435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513015,,,test,hesrt,samples/GSE277032/GSM8513015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513016,brain,normal,,midbrain,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,3073,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.3200378724777,platform_constant,4.3200378724777,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513016,,,test,hesrt,samples/GSE277032/GSM8513016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8513017,brain,normal,,midbrain,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,3311,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,fetal,12 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.924653079772385,platform_constant,4.924653079772385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513017,,,test,hesrt,samples/GSE277032/GSM8513017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513018,brain,normal,,midbrain,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,1943,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,fetal,17 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.354221582762383,platform_constant,4.354221582762383,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513018,,,test,hesrt,samples/GSE277032/GSM8513018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8513019,brain,normal,,midbrain,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,2715,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,fetal,17 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.52056468492128,platform_constant,4.52056468492128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513019,,,test,hesrt,samples/GSE277032/GSM8513019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8513020,brain,normal,,midbrain,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,3753,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,brain,,luna,,,age rule: post-conception / gestational weeks,fetal,17 post-conception weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.866341790056128,platform_constant,4.866341790056128,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513020,,,test,hesrt,samples/GSE277032/GSM8513020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8513021,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,696,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001891,Organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.1531516660179015,platform_constant,4.1531516660179015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513021,,,test,hesrt,samples/GSE277032/GSM8513021,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8513022,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,706,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001891,Organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.315831001641358,platform_constant,4.315831001641358,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513022,,,test,hesrt,samples/GSE277032/GSM8513022,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8513023,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,873,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001891,Organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.346291035436473,platform_constant,4.346291035436473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513023,,,test,hesrt,samples/GSE277032/GSM8513023,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8513024,brain,normal,,midbrain,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1060,An in vivo and in vitro spatiotemporal atlas of human fetal midbrain development,GSE277032,GSE277032,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001891,Organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.416343423342886,platform_constant,4.416343423342886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41633979,,GSM8513024,,,test,hesrt,samples/GSE277032/GSM8513024,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8514376,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3894,10X Visium Spatial transcriptomics of small intestine from mice fed stearic acid-rich high fat diet (HFD),GSE277106,GSE277106,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,control diet,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,10.868819514522844,platform_constant,10.868819514522844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41616823,,GSM8514376,,,train,hesrt,samples/GSE277106/GSM8514376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514377,small intestine,perturbation,,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3952,10X Visium Spatial transcriptomics of small intestine from mice fed stearic acid-rich high fat diet (HFD),GSE277106,GSE277106,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,stearic acid-rich HFD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,10.364900458092938,platform_constant,10.364900458092938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41616823,,GSM8514377,,,train,hesrt,samples/GSE277106/GSM8514377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514529,lymph node,disease,pancreatic ductal adenocarcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1813,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response R, tissue subtype lymph node",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.529411957458852,platform_constant,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514529,,,test,hesrt,samples/GSE277116/GSM8514529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514530,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2553,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response R, tissue subtype Tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.388715480837969,platform_constant,7.388715480837969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514530,,,test,hesrt,samples/GSE277116/GSM8514530,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514531,lymph node,disease,pancreatic ductal adenocarcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2922,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response R, tissue subtype lymph node",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.388715480837969,platform_constant,7.388715480837969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514531,,,test,hesrt,samples/GSE277116/GSM8514531,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514532,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2613,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response R, tissue subtype Tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.388715480837969,platform_constant,7.388715480837969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514532,,,test,hesrt,samples/GSE277116/GSM8514532,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514533,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3250,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response R, tissue subtype Tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.529411957458852,platform_constant,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514533,,,test,hesrt,samples/GSE277116/GSM8514533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514534,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2929,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype Tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.529411957458852,platform_constant,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514534,,,test,hesrt,samples/GSE277116/GSM8514534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514535,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response R, tissue subtype Tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.529411957458852,platform_constant,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514535,,,test,hesrt,samples/GSE277116/GSM8514535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514536,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3320,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype Tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.680000196607982,platform_constant,7.680000196607982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514536,,,test,hesrt,samples/GSE277116/GSM8514536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514537,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3134,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response R, tissue subtype Tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.680000196607982,platform_constant,7.680000196607982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514537,,,test,hesrt,samples/GSE277116/GSM8514537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514538,lymph node,disease,pancreatic ductal adenocarcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response NA, tissue subtype lymph node",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.680000196607982,platform_constant,7.680000196607982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514538,,,test,hesrt,samples/GSE277116/GSM8514538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514539,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3024,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype Tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.680000196607982,platform_constant,7.680000196607982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514539,,,test,hesrt,samples/GSE277116/GSM8514539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514540,lymph node,disease,pancreatic ductal adenocarcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2608,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response R, tissue subtype lymph node",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,7.388715480837969,platform_constant,7.388715480837969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514540,,,test,hesrt,samples/GSE277116/GSM8514540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514541,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2997,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.836734894497891,platform_constant,7.836734894497891,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514541,,,test,hesrt,samples/GSE277116/GSM8514541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514542,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2235,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.836734894497961,platform_constant,7.836734894497961,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514542,,,test,hesrt,samples/GSE277116/GSM8514542,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514543,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1324,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.836734894497961,platform_constant,7.836734894497961,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514543,,,test,hesrt,samples/GSE277116/GSM8514543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514544,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1699,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.836734894497961,platform_constant,7.836734894497961,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514544,,,test,hesrt,samples/GSE277116/GSM8514544,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514545,lymph node,disease,pancreatic ductal adenocarcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2317,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype lymph node",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,8.000000204800022,platform_constant,8.000000204800022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514545,,,test,hesrt,samples/GSE277116/GSM8514545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514546,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1693,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,8.000000204800022,platform_constant,8.000000204800022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514546,,,test,hesrt,samples/GSE277116/GSM8514546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514547,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2499,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,8.000000204800022,platform_constant,8.000000204800022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514547,,,test,hesrt,samples/GSE277116/GSM8514547,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514548,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3423,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,8.000000204800022,platform_constant,8.000000204800022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514548,,,test,hesrt,samples/GSE277116/GSM8514548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514549,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2467,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.529411957458852,platform_constant,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514549,,,test,hesrt,samples/GSE277116/GSM8514549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514550,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1458,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm B, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.529411957458852,platform_constant,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514550,,,test,hesrt,samples/GSE277116/GSM8514550,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514551,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2973,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.529411957458852,platform_constant,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514551,,,test,hesrt,samples/GSE277116/GSM8514551,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514552,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1938,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.529411957458852,platform_constant,7.529411957458852,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514552,,,test,hesrt,samples/GSE277116/GSM8514552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514553,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1450,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.388715480837969,platform_constant,7.388715480837969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514553,,,test,hesrt,samples/GSE277116/GSM8514553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514554,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2870,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm A, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.68000019660805,platform_constant,7.68000019660805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514554,,,test,hesrt,samples/GSE277116/GSM8514554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8514555,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2814,Neoadjuvant immunotherapy promotes the formation of mature tertiary lymphoid structures in a remodeled pancreatic tumor microenvironment,GSE277116,GSE277116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,"treatment arm C, path response NA, tissue subtype tumor",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.68000019660805,platform_constant,7.68000019660805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40815230,,GSM8514555,,,test,hesrt,samples/GSE277116/GSM8514555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8516367,small intestine,disease,,ileum,primary tissue,Mus musculus,house mouse,adult,unknown,Stereo-seq,Stereo-seq,False,,5043205,"High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing [Ileum, without in situ Polyadenylation]",GSE277196,GSE277196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,ApcMin/+,age rule: age with unit,adult,13 weeks,not stated,,,,,,release v3,sequencing-based,Stereoseq,,,bin,56973,unknown,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,41792309,,GSM8516367,,,val,sda-all,samples/GSE277196/GSM8516367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8516368,small intestine,disease,,ileum,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,7242576,"High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing [Ileum, with in situ Polyadenylation]",GSE277197,GSE277197,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,ApcMin/+,age rule: age with unit,adult,13 weeks,extracted field,male,,,,,release v3,sequencing-based,Stereoseq,,,bin,56953,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,41792309,,GSM8516368,,,train,sda-all,samples/GSE277197/GSM8516368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8517079,skin,disease,psoriasis,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1282,Spatial transcriptomics revealed that S1pr2 deletion in keratinocytes increases the MyD88/NF-kB pathway and psoriasis-related cytokine expression in the epidermis,GSE277246,GSE277246,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0005083,luna,psoriasis,"S1pr2 f/f, IMQ",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.811423091856056,platform_constant,3.811423091856056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39391307,,GSM8517079,,,train,hesrt,samples/GSE277246/GSM8517079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8517080,skin,disease,psoriasis,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,981,Spatial transcriptomics revealed that S1pr2 deletion in keratinocytes increases the MyD88/NF-kB pathway and psoriasis-related cytokine expression in the epidermis,GSE277246,GSE277246,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0005083,luna,psoriasis,"S1pr2 f/f K14-Cre, IMQ",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,2.813685675543849,platform_constant,2.813685675543849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39391307,,GSM8517080,,,train,hesrt,samples/GSE277246/GSM8517080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.55, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8517210,small intestine,disease,,ileum,primary tissue,Mus musculus,house mouse,adult,female,Stereo-seq,Stereo-seq,False,,4128637,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing [STOmics],GSE277255,GSE277255,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,ApcMin/+,age rule: age with unit,adult,17 weeks,extracted field,female,,,,,release v3,sequencing-based,Stereoseq,,,spot,56973,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM8517210,,,val,sda-all,samples/GSE277255/GSM8517210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8521495,other,disease,Crohn disease,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12803,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,GSE277387,GSE277387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Perianal Fistula,MONDO:0005011,luna,IPF,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,8.606406991662693,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40608410,,GSM8521495,,,train,sda-all,samples/GSE277387/GSM8521495,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8521496,other,disease,Crohn disease,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2076,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,GSE277387,GSE277387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Perianal Fistula,MONDO:0005011,luna,IPF,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.963232631713117,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40608410,,GSM8521496,,,train,sda-all,samples/GSE277387/GSM8521496,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8521497,other,disease,Crohn disease,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1890,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,GSE277387,GSE277387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Perianal Fistula,MONDO:0005011,luna,IPF,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.508689293591487,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40608410,,GSM8521497,,,train,sda-all,samples/GSE277387/GSM8521497,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8521498,other,disease,Crohn disease,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,7290,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,GSE277387,GSE277387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Perianal Fistula,MONDO:0005011,luna,PCD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,VERIFIED,ABSENT,ABSENT,image_review_fail,,VERIFIED,FAIL,,"half of the H&E image is missing, so some spots are not aligned",40608410,,GSM8521498,,,train,sda-all,samples/GSE277387/GSM8521498,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM8521499,other,disease,Crohn disease,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1376,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,GSE277387,GSE277387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Perianal Fistula,MONDO:0005011,luna,PCD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.943920133971536,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40608410,,GSM8521499,,,train,sda-all,samples/GSE277387/GSM8521499,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8521500,other,disease,Crohn disease,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1791,Single-Cell and Spatial Multi-omics Reveal Interferon Signaling in the Pathogenesis of Perianal Fistulizing Crohn’s Disease,GSE277387,GSE277387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Perianal Fistula,MONDO:0005011,luna,PCD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.503632123473542,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40608410,,GSM8521500,,,train,sda-all,samples/GSE277387/GSM8521500,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8522533,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,7207,Utilizing combined spatial transcriptomics to elucidate localized immune responses within human coronary arteries throughout the progression of atherosclerosis [CosMx],GSE277441,GSE277441,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001621,coronary artery,MONDO:0005311,luna,,Mild,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1178,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8522533,,,train,sda-all,samples/GSE277441/GSM8522533,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8522534,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,19050,Utilizing combined spatial transcriptomics to elucidate localized immune responses within human coronary arteries throughout the progression of atherosclerosis [CosMx],GSE277441,GSE277441,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001621,coronary artery,MONDO:0005311,luna,,Moderate,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1178,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8522534,,,train,sda-all,samples/GSE277441/GSM8522534,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8522535,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,53439,Utilizing combined spatial transcriptomics to elucidate localized immune responses within human coronary arteries throughout the progression of atherosclerosis [CosMx],GSE277441,GSE277441,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001621,coronary artery,MONDO:0005311,luna,,Severe,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1178,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8522535,,,train,sda-all,samples/GSE277441/GSM8522535,sda-tissue-disease-2.5,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8522749,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,54878,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],GSE277463,GSE277463,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522749,,,train,sda-all,samples/GSE277463/GSM8522749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8522750,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,47443,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],GSE277463,GSE277463,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522750,,,train,sda-all,samples/GSE277463/GSM8522750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8522751,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,50508,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],GSE277463,GSE277463,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522751,,,train,sda-all,samples/GSE277463/GSM8522751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8522752,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,53020,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],GSE277463,GSE277463,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,5xFAD,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522752,,,train,sda-all,samples/GSE277463/GSM8522752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8522753,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,51513,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],GSE277463,GSE277463,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,5xFAD,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522753,,,train,sda-all,samples/GSE277463/GSM8522753,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8522754,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,45788,Impaired parvalbumin interneurons in the retrosplenial cortex as the cause of sex-dependent vulnerability in Alzheimer’s disease [Xenium],GSE277463,GSE277463,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,5xFAD,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40305608;42161970,,GSM8522754,,,train,sda-all,samples/GSE277463/GSM8522754,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8524871,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),3183,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,GSE277577,GSE277577,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,(NBH) Non-infectious Brain Homogenate,luna,adult,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.889126809466556,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524871,,,train,sda-all,samples/GSE277577/GSM8524871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.64}",,
GSM8524872,brain,disease,prion disease,brain,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2400,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,GSE277577,GSE277577,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0005429,luna,,(RML6) Prion-containing brain homogenate,luna,juvenile,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.890975171347878,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524872,,,train,sda-all,samples/GSE277577/GSM8524872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8524873,brain,disease,prion disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2857,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,GSE277577,GSE277577,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0005429,luna,,(RML6) Prion-containing brain homogenate,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.892736750499913,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524873,,,train,sda-all,samples/GSE277577/GSM8524873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8524874,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2787,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,GSE277577,GSE277577,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,(NBH) Non-infectious Brain Homogenate,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.888090154837266,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524874,,,train,sda-all,samples/GSE277577/GSM8524874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8524875,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2725,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,GSE277577,GSE277577,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,(NBH) Non-infectious Brain Homogenate,luna,adult,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.076473409072862,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524875,,,train,sda-all,samples/GSE277577/GSM8524875,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8524879,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2678,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,GSE277577,GSE277577,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,(NBH) Non-infectious Brain Homogenate,luna,adult,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.886224719076924,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524879,,,train,sda-all,samples/GSE277577/GSM8524879,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8524880,brain,disease,prion disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2071,Gpnmb⁺ Microglia Represent a Distinct Subtype Reacting to Neuronal Loss induced by Prion Disease,GSE277577,GSE277577,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0005429,luna,,(RML6) Prion-containing brain homogenate,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0847591782892305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42120390,,GSM8524880,,,train,sda-all,samples/GSE277577/GSM8524880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.74}",,
GSM8534862,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,89453,Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension,GSE277936,GSE277936,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,fixed frozen mouse lung section,,luna,,littermate Egln1f/f (WT) control,luna,not stated,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,Xenium Mouse Tissue Atlassing Gene Expression,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49998842235257784,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8534862,,,train,sda-all,samples/GSE277936/GSM8534862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8534863,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,H&E,39594,Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension,GSE277936,GSE277936,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,littermate Egln1f/f (WT) control,age rule: age with unit,not stated,2–3.5 months,not stated,,,,,,release v3,imaging-based,10x Genomics Xenium In Situ,,,cell,541,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8534863,,,train,hesrt,samples/GSE277936/GSM8534863,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8534864,lung,disease,pulmonary hypertension,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,87805,Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension,GSE277936,GSE277936,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,fixed frozen mouse lung section,MONDO:0005149,luna,,Egln1Tie2Cre (KO),luna,not stated,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,Xenium Mouse Tissue Atlassing Gene Expression,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49998709477596526,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8534864,,,train,sda-all,samples/GSE277936/GSM8534864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8534865,lung,disease,pulmonary hypertension,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,83996,Enhanced Spatial Transcriptomics Analysis of Mouse Lung Tissues Revealed Cell-Specific Gene Expression Changes Associated with Pulmonary Hypertension,GSE277936,GSE277936,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,fixed frozen mouse lung section,MONDO:0005149,luna,,Egln1Tie2Cre (KO),luna,not stated,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,Xenium Mouse Tissue Atlassing Gene Expression,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000257785110332,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8534865,,,train,sda-all,samples/GSE277936/GSM8534865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8540632,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,False,,58826,Defective ventral neurogenesis due to midfetal Chd8 mutation drives autistic-like behavior in mice,GSE278133,GSE278133,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,luna,adult,8 weeks of age,extracted field,Male,,,,,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42203765,,GSM8540632,,,test,sda-all,samples/GSE278133/GSM8540632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8541068,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1427,Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [Spatial transcriptomics],GSE278169,GSE278169,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,unwounded control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.363613416336368,platform_constant,4.363613416336368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40816279,,GSM8541068,,,train,hesrt,samples/GSE278169/GSM8541068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.44, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8541070,skin,disease,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,926,Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [Spatial transcriptomics],GSE278169,GSE278169,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,Day 12 post wound,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.3685750439848,platform_constant,4.3685750439848,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40816279,,GSM8541070,,,train,hesrt,samples/GSE278169/GSM8541070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.5, ""life_stage"": 0.99}",disease_status;uberon,low_confidence_annotation
GSM8541072,skin,normal,,skin of body,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,557,Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [Spatial transcriptomics],GSE278169,GSE278169,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,skin,,luna,,Day 21 post wound,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.8044020574519575,platform_constant,4.8044020574519575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40816279,,GSM8541072,,,train,hesrt,samples/GSE278169/GSM8541072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.37, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8541073,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,389,Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [Spatial transcriptomics],GSE278169,GSE278169,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,Day 21 post wound,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.806348247466097,platform_constant,4.806348247466097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40816279,,GSM8541073,,,train,hesrt,samples/GSE278169/GSM8541073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.44, ""life_stage"": 0.92}",disease_status;uberon,low_confidence_annotation
GSM8541074,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,586,Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [Spatial transcriptomics],GSE278169,GSE278169,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,Day 28 post wound,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.810126594611027,platform_constant,4.810126594611027,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40816279,,GSM8541074,,,train,hesrt,samples/GSE278169/GSM8541074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.44, ""life_stage"": 0.98}",disease_status;uberon,low_confidence_annotation
GSM8546115,brain,disease,brain neoplasm;glioblastoma,brain,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3193,Drugless Extracellular Hydrogels Enable the Reprogramming of Malignant Glioblastoma,GSE278415,GSE278415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor-inoculated model,MONDO:0021211;MONDO:0018177,luna,,Day 11 Vehicle,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,32589,counts,um,1.0,verified,6.98562844305167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8546115,,,train,sda-all,samples/GSE278415/GSM8546115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8546116,brain,disease,brain neoplasm;glioblastoma,brain,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3488,Drugless Extracellular Hydrogels Enable the Reprogramming of Malignant Glioblastoma,GSE278415,GSE278415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor-inoculated model,MONDO:0021211;MONDO:0018177,luna,,Day 11 Vehicle,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,32589,counts,um,1.0,verified,6.933369534830865,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8546116,,,train,sda-all,samples/GSE278415/GSM8546116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8546117,brain,disease,brain neoplasm;glioblastoma,brain,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3352,Drugless Extracellular Hydrogels Enable the Reprogramming of Malignant Glioblastoma,GSE278415,GSE278415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor-inoculated model,MONDO:0021211;MONDO:0018177,luna,,Day 11 TREAT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,32589,counts,um,1.0,verified,6.973815141085579,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8546117,,,train,sda-all,samples/GSE278415/GSM8546117,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.43, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8546118,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3013,Drugless Extracellular Hydrogels Enable the Reprogramming of Malignant Glioblastoma,GSE278415,GSE278415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain tumor-inoculated model,MONDO:0021211;MONDO:0018177,luna,,Day 11 TREAT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,32589,counts,um,1.0,verified,6.924013160591855,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8546118,,,train,sda-all,samples/GSE278415/GSM8546118,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.4, ""disease_status"": 0.88, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8546224,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,32760,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,GSE278431,GSE278431,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001068,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,,luna,,Rnaseltm1Slvm,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999836477554392,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546224,,,train,sda-all,samples/GSE278431/GSM8546224,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8546225,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,30901,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,GSE278431,GSE278431,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001068,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,,luna,,Rnaseltm1Slvm,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999948282995449,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546225,,,train,sda-all,samples/GSE278431/GSM8546225,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8546226,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,18612,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,GSE278431,GSE278431,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001068,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,,luna,,Rnaseltm1Slvm,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999927632123067,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546226,,,train,sda-all,samples/GSE278431/GSM8546226,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8546227,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24144,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,GSE278431,GSE278431,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001068,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,,luna,,C57BL/6J,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49999896753944,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546227,,,train,sda-all,samples/GSE278431/GSM8546227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8546228,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16368,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,GSE278431,GSE278431,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001068,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,,luna,,C57BL/6J,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000084472142964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546228,,,train,sda-all,samples/GSE278431/GSM8546228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8546229,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19985,In situ targeted gene expression analysis of healing skin on SD0 post-wounding in Wildtype and Rnasel knock out wounds,GSE278431,GSE278431,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001068,Formalin-fixed and paraffin-embedded (FFPE) wounded back skin at SD0,,luna,,C57BL/6J,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000121969526383,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39903537,,GSM8546229,,,train,sda-all,samples/GSE278431/GSM8546229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9046243,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,13168,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,GSE278603,GSE278603,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Whole embryo,,luna,,WT,age rule: embryonic day,embryonic,E7.5,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,17172,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9046243,,,train,sda-all,samples/GSE278603/GSM9046243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046244,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,8190,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,GSE278603,GSE278603,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Whole embryo,,luna,,WT,age rule: embryonic day,embryonic,E7.5,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,16364,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9046244,,,train,sda-all,samples/GSE278603/GSM9046244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046245,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,20935,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,GSE278603,GSE278603,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Whole embryo,,luna,,WT,age rule: embryonic day,embryonic,E7.75,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,18455,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9046245,,,train,sda-all,samples/GSE278603/GSM9046245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046246,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,23736,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,GSE278603,GSE278603,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Whole embryo,,luna,,WT,age rule: embryonic day,embryonic,E7.75,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,18790,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9046246,,,train,sda-all,samples/GSE278603/GSM9046246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046247,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,11048,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,GSE278603,GSE278603,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Whole embryo,,luna,,WT,age rule: embryonic day,embryonic,E8.0,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,16636,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9046247,,,train,sda-all,samples/GSE278603/GSM9046247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046248,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,27266,Digital reconstruction of spatiotemporal atlas unveils the cellular origins and signaling networks underlying early mouse organogenesis,GSE278603,GSE278603,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Whole embryo,,luna,,WT,age rule: embryonic day,embryonic,E8.0,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,19046,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9046248,,,train,sda-all,samples/GSE278603/GSM9046248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8551250,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,332833,Clearance of p21-highly-expressing senescent cells accelerates wound healing,GSE278611,GSE278611,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,dorsal cutaneous skin wound,,luna,,"tamoxifen, 6 doses",luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,mMulti_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49999852402881095,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39537987,,GSM8551250,,,val,sda-all,samples/GSE278611/GSM8551250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.71, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8551262,kidney,normal,,kidney,primary tissue,Homo sapiens,human,fetal,unknown,CosMx,CosMx,False,,230538,Single-Cell Spatial Mapping of Human Kidney Development Reveals Cellular Niches and Lineage Dynamics [CosMx],GSE278614,GSE278614,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Fetal Kidney,,luna,,,luna,fetal,18w5d,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,995,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42533102,,GSM8551262,,,test,sda-all,samples/GSE278614/GSM8551262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8551263,kidney,normal,,kidney,primary tissue,Homo sapiens,human,fetal,unknown,CosMx,CosMx,False,,127023,Single-Cell Spatial Mapping of Human Kidney Development Reveals Cellular Niches and Lineage Dynamics [CosMx],GSE278614,GSE278614,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Fetal Kidney,,luna,,,luna,fetal,15w6d,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,995,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42533102,,GSM8551263,,,test,sda-all,samples/GSE278614/GSM8551263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8551264,kidney,normal,,kidney,primary tissue,Homo sapiens,human,fetal,unknown,CosMx,CosMx,False,,118197,Single-Cell Spatial Mapping of Human Kidney Development Reveals Cellular Niches and Lineage Dynamics [CosMx],GSE278614,GSE278614,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Fetal Kidney,,luna,,,luna,fetal,19w0d,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,995,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42533102,,GSM8551264,,,test,sda-all,samples/GSE278614/GSM8551264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8551438,liver,disease,metabolic dysfunction-associated steatotic liver disease,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3738,Spatial transcriptome profile of liver tissue from a patient with metabolic dysfunction-associated steatotic liver disease,GSE278621,GSE278621,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver,MONDO:0013209,luna,Metabolic dysfunction-associated steatotic liver disease,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.786319673502356,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42329773,,GSM8551438,,,train,sda-all,samples/GSE278621/GSM8551438,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552410,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,2940,Visium spatial transcriptomics and proteomics identifies novel hepatic cell populations and transcriptomic signatures of alcohol-associated hepatitis,GSE278662,GSE278662,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,,non-ALD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,37117,counts,pixel,4.1107843304769345,platform_constant,4.1107843304769345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592394,,CG-9da209a12422,library_alias,GSM8552414,train,hesrt,samples/GSE278662/GSM8552410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8552411,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,3774,Visium spatial transcriptomics and proteomics identifies novel hepatic cell populations and transcriptomic signatures of alcohol-associated hepatitis,GSE278662,GSE278662,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,,non-ALD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,37117,counts,pixel,3.9468032922713587,platform_constant,3.9468032922713587,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592394,,CG-534189bba4e9,library_alias,GSM8552415,train,hesrt,samples/GSE278662/GSM8552411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552412,liver,disease,hepatitis,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,3947,Visium spatial transcriptomics and proteomics identifies novel hepatic cell populations and transcriptomic signatures of alcohol-associated hepatitis,GSE278662,GSE278662,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0002251,luna,alcohol-associated hepatitis,AH,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,37117,counts,pixel,4.690671941871225,platform_constant,4.690671941871225,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592394,,CG-c786341f7290,library_alias,GSM8552416,train,hesrt,samples/GSE278662/GSM8552412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8552413,liver,disease,hepatitis,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,3352,Visium spatial transcriptomics and proteomics identifies novel hepatic cell populations and transcriptomic signatures of alcohol-associated hepatitis,GSE278662,GSE278662,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0002251,luna,alcohol-associated hepatitis,AH,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist,,,spot,37117,counts,pixel,3.6783941301507395,platform_constant,3.6783941301507395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39592394,,CG-10014ebce83b,library_alias,GSM8552417,train,hesrt,samples/GSE278662/GSM8552413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8552940,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4351,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9924453479905457,platform_constant,3.9924453479905457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552940,,,train,hesrt,samples/GSE278694/GSM8552940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552941,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1389,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.965247517586142,platform_constant,3.965247517586142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552941,,,train,hesrt,samples/GSE278694/GSM8552941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8552942,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4579,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.38409344544115,platform_constant,4.38409344544115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552942,,,train,hesrt,samples/GSE278694/GSM8552942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552943,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2276,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.137362538727917,platform_constant,4.137362538727917,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552943,,,train,hesrt,samples/GSE278694/GSM8552943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552944,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3088,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9523351479784625,platform_constant,3.9523351479784625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552944,,,train,hesrt,samples/GSE278694/GSM8552944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552945,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2247,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9875000359273876,platform_constant,3.9875000359273876,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552945,,,train,hesrt,samples/GSE278694/GSM8552945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552946,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.156992658426844,platform_constant,4.156992658426844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552946,,,train,hesrt,samples/GSE278694/GSM8552946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552947,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2580,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.022390291239577,platform_constant,4.022390291239577,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552947,,,train,hesrt,samples/GSE278694/GSM8552947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552948,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2677,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9162090297059153,platform_constant,3.9162090297059153,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552948,,,train,hesrt,samples/GSE278694/GSM8552948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552949,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1824,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.906456089974096,platform_constant,3.906456089974096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552949,,,train,hesrt,samples/GSE278694/GSM8552949,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552950,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4990,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.8980887098282313,platform_constant,3.8980887098282313,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552950,,,train,hesrt,samples/GSE278694/GSM8552950,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552951,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4855,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.9838787977999606,platform_constant,3.9838787977999606,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552951,,,train,hesrt,samples/GSE278694/GSM8552951,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552952,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4325,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.1464770449210535,platform_constant,4.1464770449210535,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552952,,,train,hesrt,samples/GSE278694/GSM8552952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552953,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4322,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.1690117447806285,platform_constant,4.1690117447806285,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552953,,,train,hesrt,samples/GSE278694/GSM8552953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552954,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4701,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.8416780286341714,platform_constant,3.8416780286341714,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552954,,,train,hesrt,samples/GSE278694/GSM8552954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8552955,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.9086379713019688,platform_constant,3.9086379713019688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552955,,,train,hesrt,samples/GSE278694/GSM8552955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552956,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4851,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.8412266937343613,platform_constant,3.8412266937343613,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552956,,,train,hesrt,samples/GSE278694/GSM8552956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552957,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4012,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.898045768064406,platform_constant,3.898045768064406,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552957,,,train,hesrt,samples/GSE278694/GSM8552957,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552958,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4980,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.841508759403753,platform_constant,3.841508759403753,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552958,,,train,hesrt,samples/GSE278694/GSM8552958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552959,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4823,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.8312954188176596,platform_constant,3.8312954188176596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552959,,,train,hesrt,samples/GSE278694/GSM8552959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8552960,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Integrated Single-Cell and Spatial Transcriptomics Uncover Distinct Cellular Subtypes Involved in Neural Invasion in PDAC,GSE278694,GSE278694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.897974201611597,platform_constant,3.897974201611597,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40680743,10.1016/j.ccell.2025.06.020,GSM8552960,,,train,hesrt,samples/GSE278694/GSM8552960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8554642,kidney,disease,kidney neoplasm,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,283682,Comparison of CosMx and GeoMx profiling performed on the same human kidney tissues [CosMx],GSE278766,GSE278766,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,human kidney tissues,MONDO:0021163,luna,kidney tumor,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40311874,,GSM8554642,,,train,sda-all,samples/GSE278766/GSM8554642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8555878,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,9830,Visium Spatial Transcriptomics of the Human Hypothalamus,GSE278848,GSE278848,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39910307,,GSM8555878,,,test,sda-all,samples/GSE278848/GSM8555878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555879,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,9995,Visium Spatial Transcriptomics of the Human Hypothalamus,GSE278848,GSE278848,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39910307,,GSM8555879,,,test,sda-all,samples/GSE278848/GSM8555879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555880,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,11199,Visium Spatial Transcriptomics of the Human Hypothalamus,GSE278848,GSE278848,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39910307,,GSM8555880,,,test,sda-all,samples/GSE278848/GSM8555880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555881,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,12531,Visium Spatial Transcriptomics of the Human Hypothalamus,GSE278848,GSE278848,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39910307,,GSM8555881,,,test,sda-all,samples/GSE278848/GSM8555881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555882,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,9314,Visium Spatial Transcriptomics of the Human Hypothalamus,GSE278848,GSE278848,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39910307,,GSM8555882,,,test,sda-all,samples/GSE278848/GSM8555882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555883,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,10547,Visium Spatial Transcriptomics of the Human Hypothalamus,GSE278848,GSE278848,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39910307,,GSM8555883,,,test,sda-all,samples/GSE278848/GSM8555883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8555884,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,9565,Visium Spatial Transcriptomics of the Human Hypothalamus,GSE278848,GSE278848,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39910307,,GSM8555884,,,test,sda-all,samples/GSE278848/GSM8555884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8555885,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,5970,Visium Spatial Transcriptomics of the Human Hypothalamus,GSE278848,GSE278848,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39910307,,GSM8555885,,,test,sda-all,samples/GSE278848/GSM8555885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8555886,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,8402,Visium Spatial Transcriptomics of the Human Hypothalamus,GSE278848,GSE278848,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39910307,,GSM8555886,,,test,sda-all,samples/GSE278848/GSM8555886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8557976,prostate,disease,benign prostatic hyperplasia,prostate gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4199,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Benign primary prostate tumor, Patient sample",MONDO:0010811,luna,benign prostatic hyperplasia,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.153982201928492,platform_constant,5.153982201928492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557976,,,train,hesrt,samples/GSE278936/GSM8557976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.63, ""disease_status"": 0.72, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8557977,prostate,disease,benign prostatic hyperplasia,prostate gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1317,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Benign primary prostate tumor, Patient sample",MONDO:0010811,luna,benign prostatic hyperplasia,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757475417636254,platform_constant,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557977,,,train,hesrt,samples/GSE278936/GSM8557977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.52, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8557978,prostate,disease,benign prostatic hyperplasia,prostate gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2030,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Benign primary prostate tumor, Patient sample",MONDO:0010811,luna,benign prostatic hyperplasia,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757521989921981,platform_constant,4.757521989921981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557978,,,train,hesrt,samples/GSE278936/GSM8557978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.63, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8557979,prostate,disease,benign prostatic hyperplasia,prostate gland,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3841,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Benign primary prostate tumor, Patient sample",MONDO:0010811,luna,benign prostatic hyperplasia,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.75747541763628,platform_constant,4.75747541763628,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557979,,,train,hesrt,samples/GSE278936/GSM8557979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.36, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8557980,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3937,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.1539317486185015,platform_constant,5.1539317486185015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557980,,,train,hesrt,samples/GSE278936/GSM8557980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557981,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2148,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757475417636254,platform_constant,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557981,,,train,hesrt,samples/GSE278936/GSM8557981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557982,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3391,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,6.541529138840581,platform_constant,6.541529138840581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557982,,,train,hesrt,samples/GSE278936/GSM8557982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557983,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2047,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.3521601685394415,platform_constant,5.3521601685394415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557983,,,train,hesrt,samples/GSE278936/GSM8557983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557984,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,991,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757521989921981,platform_constant,4.757521989921981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557984,,,train,hesrt,samples/GSE278936/GSM8557984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557985,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4899,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,6.570602028671081,platform_constant,6.570602028671081,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557985,,,train,hesrt,samples/GSE278936/GSM8557985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557986,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2099,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757475417636254,platform_constant,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557986,,,train,hesrt,samples/GSE278936/GSM8557986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8557987,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,740,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757475417636254,platform_constant,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557987,,,train,hesrt,samples/GSE278936/GSM8557987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557988,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1617,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,3.982300924778753,platform_constant,3.982300924778753,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557988,,,train,hesrt,samples/GSE278936/GSM8557988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557989,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1190,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757521989921981,platform_constant,4.757521989921981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557989,,,train,hesrt,samples/GSE278936/GSM8557989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8557990,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4517,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,8.325582294171769,platform_constant,8.325582294171769,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557990,,,train,hesrt,samples/GSE278936/GSM8557990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8557991,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1096,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.36106190224537,platform_constant,4.36106190224537,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557991,,,train,hesrt,samples/GSE278936/GSM8557991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557992,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1839,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.36101921098271,platform_constant,4.36101921098271,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557992,,,train,hesrt,samples/GSE278936/GSM8557992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557993,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2254,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.3521601685394105,platform_constant,5.3521601685394105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557993,,,train,hesrt,samples/GSE278936/GSM8557993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557994,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1778,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757475417636254,platform_constant,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557994,,,train,hesrt,samples/GSE278936/GSM8557994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557995,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2738,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757475417636254,platform_constant,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557995,,,train,hesrt,samples/GSE278936/GSM8557995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557996,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4704,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,8.920353910938044,platform_constant,8.920353910938044,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557996,,,train,hesrt,samples/GSE278936/GSM8557996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557997,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3082,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,goserelin,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.946844591747711,platform_constant,5.946844591747711,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557997,,,train,hesrt,samples/GSE278936/GSM8557997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8557998,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3143,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,bicalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757475417636254,platform_constant,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557998,,,train,hesrt,samples/GSE278936/GSM8557998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8557999,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4572,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,goserelin,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,6.541529138840679,platform_constant,6.541529138840679,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8557999,,,train,hesrt,samples/GSE278936/GSM8557999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8558000,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4419,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,goserelin,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.9468445917476895,platform_constant,5.9468445917476895,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558000,,,train,hesrt,samples/GSE278936/GSM8558000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558001,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2845,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,bicalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.35216016853941,platform_constant,5.35216016853941,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558001,,,train,hesrt,samples/GSE278936/GSM8558001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558002,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3906,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,goserelin,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,6.541593175737759,platform_constant,6.541593175737759,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558002,,,train,hesrt,samples/GSE278936/GSM8558002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558003,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4828,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,bicalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757475417636254,platform_constant,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558003,,,train,hesrt,samples/GSE278936/GSM8558003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558004,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3621,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,goserelin,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,7.730973347917858,platform_constant,7.730973347917858,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558004,,,train,hesrt,samples/GSE278936/GSM8558004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8558005,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4470,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,bicalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,8.325582294171769,platform_constant,8.325582294171769,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558005,,,train,hesrt,samples/GSE278936/GSM8558005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8558006,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3602,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,bicalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,7.730973347917994,platform_constant,7.730973347917994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558006,,,train,hesrt,samples/GSE278936/GSM8558006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8558007,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4401,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,bicalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,6.549034241984517,platform_constant,6.549034241984517,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558007,,,train,hesrt,samples/GSE278936/GSM8558007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8558008,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2296,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix + apalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.796163069544385,platform_constant,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558008,,,train,hesrt,samples/GSE278936/GSM8558008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558009,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1802,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.796163069544385,platform_constant,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558009,,,train,hesrt,samples/GSE278936/GSM8558009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558010,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2216,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.796163069544372,platform_constant,4.796163069544372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558010,,,train,hesrt,samples/GSE278936/GSM8558010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558011,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2860,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix + apalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.796163069544385,platform_constant,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558011,,,train,hesrt,samples/GSE278936/GSM8558011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558012,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2071,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.796163069544372,platform_constant,4.796163069544372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558012,,,train,hesrt,samples/GSE278936/GSM8558012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558013,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1525,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix + apalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.796163069544385,platform_constant,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558013,,,train,hesrt,samples/GSE278936/GSM8558013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558014,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1465,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.79616306954436,platform_constant,4.79616306954436,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558014,,,train,hesrt,samples/GSE278936/GSM8558014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8558015,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1650,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix + apalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.796163069544385,platform_constant,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558015,,,train,hesrt,samples/GSE278936/GSM8558015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558016,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2093,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.796163069544385,platform_constant,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558016,,,train,hesrt,samples/GSE278936/GSM8558016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558017,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1748,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix + apalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.796163069544372,platform_constant,4.796163069544372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558017,,,train,hesrt,samples/GSE278936/GSM8558017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558018,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2247,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,prostate cancer,degarelix + apalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.796163069544385,platform_constant,4.796163069544385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558018,,,train,hesrt,samples/GSE278936/GSM8558018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558019,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,578,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,castration-resistant prostate cancer,orchiectomy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757475417636254,platform_constant,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558019,,,train,hesrt,samples/GSE278936/GSM8558019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558020,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1395,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,castration-resistant prostate cancer,orchiectomy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.75747541763628,platform_constant,4.75747541763628,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558020,,,train,hesrt,samples/GSE278936/GSM8558020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8558021,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1818,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,castration-resistant prostate cancer,LHRH + bicalutamide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757521989921981,platform_constant,4.757521989921981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558021,,,train,hesrt,samples/GSE278936/GSM8558021,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558022,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1586,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,castration-resistant prostate cancer,orchiectomy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,7.136213586825774,platform_constant,7.136213586825774,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558022,,,train,hesrt,samples/GSE278936/GSM8558022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8558023,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,945,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,"Primary prostate cancer tumor, Patient sample",MONDO:0008315,luna,castration-resistant prostate cancer,LHRH,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.75747541763628,platform_constant,4.75747541763628,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558023,,,train,hesrt,samples/GSE278936/GSM8558023,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8558024,liver,disease,metastatic prostate carcinoma;metastatic malignant neoplasm in the liver,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2190,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,"Metastatic prostate cancer tumor, Liver metastasis, Patient sample",MONDO:0004956;MONDO:1060297,luna,metastatic prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757521989921981,platform_constant,4.757521989921981,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558024,,,train,hesrt,samples/GSE278936/GSM8558024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8558025,meninges,disease,metastatic prostate carcinoma,dura mater,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2346,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0002363,"Metastatic prostate cancer tumor, Subdural metastasis, Patient sample",MONDO:0004956,luna,metastatic prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.3521601685394415,platform_constant,5.3521601685394415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558025,,,train,hesrt,samples/GSE278936/GSM8558025,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8558026,lymph node,disease,metastatic prostate carcinoma,paraaortic lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2255,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016386,"Metastatic prostate cancer tumor, Pelvic paraaortic lymph node metastasis, Patient sample",MONDO:0004956,luna,metastatic prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,5.153982201928492,platform_constant,5.153982201928492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558026,,,train,hesrt,samples/GSE278936/GSM8558026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8558027,heart,disease,metastatic prostate carcinoma,heart,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3162,Single cell and spatial transcriptomics highlight the interaction of club-like cells with immunosuppressive myeloid cells in prostate cancer,GSE278936,GSE278936,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,"Metastatic prostate cancer tumor, Pericardial metastasis, Patient sample",MONDO:0004956,luna,metastatic prostate cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.757475417636254,platform_constant,4.757475417636254,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39550375,10.1038/s41467-024-54364-1,GSM8558027,,,train,hesrt,samples/GSE278936/GSM8558027,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8558999,other,disease,arthritic joint disease,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,7255,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],GSE278969,GSE278969,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0007616,synovial tissue,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,454,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40601776,,GSM8558999,,,train,sda-all,samples/GSE278969/GSM8558999,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8559000,other,disease,arthritic joint disease,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,80079,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],GSE278969,GSE278969,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0007616,synovial tissue,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,531,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40601776,,GSM8559000,,,train,sda-all,samples/GSE278969/GSM8559000,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.9400000000000001, ""life_stage"": 0.98}",,
GSM8559001,other,disease,arthritic joint disease,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,36716,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],GSE278969,GSE278969,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0007616,synovial tissue,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,526,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40601776,,GSM8559001,,,train,sda-all,samples/GSE278969/GSM8559001,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 0.92}",,
GSM8559002,other,disease,arthritic joint disease,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,75207,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],GSE278969,GSE278969,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0007616,synovial tissue,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40601776,,GSM8559002,,,train,sda-all,samples/GSE278969/GSM8559002,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8559003,other,disease,arthritic joint disease,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,51694,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],GSE278969,GSE278969,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0007616,synovial tissue,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,521,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40601776,,GSM8559003,,,train,sda-all,samples/GSE278969/GSM8559003,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8559004,other,disease,arthritic joint disease,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,3442,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],GSE278969,GSE278969,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0007616,synovial tissue,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,397,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40601776,,GSM8559004,,,train,sda-all,samples/GSE278969/GSM8559004,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM8559005,other,disease,arthritic joint disease,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,50959,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],GSE278969,GSE278969,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0007616,synovial tissue,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,527,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40601776,,GSM8559005,,,train,sda-all,samples/GSE278969/GSM8559005,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.96, ""life_stage"": 0.89}",,
GSM8559006,other,disease,arthritic joint disease,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,82341,Distinct cellular and spatial niches within the inflamed synovium of childhood arthritis [xenium],GSE278969,GSE278969,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0007616,synovial tissue,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,534,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40601776,,GSM8559006,,,train,sda-all,samples/GSE278969/GSM8559006,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8563697,brain,normal,,brain,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4010,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,age rule: bare number read as years,aged,84,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563697,,,train,hesrt,samples/GSE279181/GSM8563697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563698,brain,normal,,brain,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4005,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,age rule: bare number read as years,adult,61,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563698,,,train,hesrt,samples/GSE279181/GSM8563698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563699,brain,normal,,brain,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4524,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,age rule: bare number read as years,adult,54,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563699,,,train,hesrt,samples/GSE279181/GSM8563699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563700,brain,normal,,brain,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3006,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,age rule: bare number read as years,aged,84,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563700,,,train,hesrt,samples/GSE279181/GSM8563700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563701,brain,normal,,brain,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4489,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,age rule: bare number read as years,aged,81,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563701,,,train,hesrt,samples/GSE279181/GSM8563701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563702,brain,normal,,brain,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4384,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,,luna,,Control,age rule: bare number read as years,aged,68,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563702,,,train,hesrt,samples/GSE279181/GSM8563702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563703,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3858,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,42,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563703,,,train,hesrt,samples/GSE279181/GSM8563703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563704,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3585,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,52,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563704,,,train,hesrt,samples/GSE279181/GSM8563704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8563705,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4108,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,52,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563705,,,train,hesrt,samples/GSE279181/GSM8563705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8563706,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3726,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,53,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563706,,,train,hesrt,samples/GSE279181/GSM8563706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8563707,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4163,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,50,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563707,,,train,hesrt,samples/GSE279181/GSM8563707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8563708,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3877,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,50,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563708,,,train,hesrt,samples/GSE279181/GSM8563708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8563709,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4691,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,50,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563709,,,train,hesrt,samples/GSE279181/GSM8563709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563710,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2826,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,61,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563710,,,train,hesrt,samples/GSE279181/GSM8563710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563711,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4509,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,60,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563711,,,train,hesrt,samples/GSE279181/GSM8563711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8563712,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4733,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,60,extracted field,female,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563712,,,train,hesrt,samples/GSE279181/GSM8563712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8563713,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3598,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,50,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563713,,,train,hesrt,samples/GSE279181/GSM8563713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8563714,brain,disease,multiple sclerosis,brain,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2811,Cell type mapping reveals tissue niches and interactions in subcortical multiple sclerosis lesions [spatial transcriptomics],GSE279181,GSE279181+GSE279183,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005301,luna,multiple sclerosis,MS,age rule: bare number read as years,adult,50,extracted field,male,,,,,GEO series text (assay_final.csv),sequencing-based,high-throughput sequencing,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39501036,10.1038/s41593-024-01796-z,GSM8563714,,,train,hesrt,samples/GSE279181/GSM8563714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8565271,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,399177,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE279255,GSE279255,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,LCMV infection and P14 CD8 T cell transfer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19059,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39843748,,GSM8565271,,,train,hesrt,samples/GSE279255/GSM8565271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8565626,brain,perturbation,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4152,Spatially Resolved Transcriptomic Signatures of Hippocampal Subregions and Arc-Expressing Ensembles in Active Place Avoidance Memory [Spatial Transcriptomics],GSE279273,GSE279273,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,Coronal Mouse Brain with Bilateral Dorsal Hippocampus,,luna,,trained,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.006060881677566,platform_constant,4.006060881677566,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38260257,,GSM8565626,,,train,hesrt,samples/GSE279273/GSM8565626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.72, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8565627,brain,perturbation,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3738,Spatially Resolved Transcriptomic Signatures of Hippocampal Subregions and Arc-Expressing Ensembles in Active Place Avoidance Memory [Spatial Transcriptomics],GSE279273,GSE279273,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,Coronal Mouse Brain with Bilateral Dorsal Hippocampus,,luna,,untrained,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.003989241547924,platform_constant,4.003989241547924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38260257,,GSM8565627,,,train,hesrt,samples/GSE279273/GSM8565627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.5, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8569295,liver,disease,COVID-19,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4981,Spatial transcriptomical analysis of livers from patients with COVID19,GSE279405,GSE279405,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0100096,luna,COVID-19,Deceased,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39709771,,GSM8569295,,,train,hesrt,samples/GSE279405/GSM8569295,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM8569296,liver,disease,COVID-19,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,271,Spatial transcriptomical analysis of livers from patients with COVID19,GSE279405,GSE279405,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0100096,luna,COVID-19,Moderate,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,7.142856785714281,platform_constant,7.142856785714281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39709771,,GSM8569296,,,train,hesrt,samples/GSE279405/GSM8569296,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8569297,liver,disease,COVID-19,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,751,Spatial transcriptomical analysis of livers from patients with COVID19,GSE279405,GSE279405,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0100096,luna,COVID-19,Severe,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,8.557851627466466,platform_constant,8.557851627466466,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39709771,,GSM8569297,,,train,hesrt,samples/GSE279405/GSM8569297,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8573641,pancreas,disease,preneoplastic lesion,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2971,Mapping the Evolution of Acinar cell derived Pancreatic Preneoplastic Lesions in a Mouse Model: A Detailed Transcriptomic and Pathological Characterization,GSE279507,GSE279507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:1060215,luna,,Krastm4Tyj; Ptf1atm1(cre)Hnak (=p48Cre/+-LSL-KrasG12D/+),age rule: age with unit,adult,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.450783024189433,platform_constant,4.450783024189433,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8573641,,,train,hesrt,samples/GSE279507/GSM8573641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8573642,pancreas,disease,preneoplastic lesion,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2673,Mapping the Evolution of Acinar cell derived Pancreatic Preneoplastic Lesions in a Mouse Model: A Detailed Transcriptomic and Pathological Characterization,GSE279507,GSE279507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:1060215,luna,,Krastm4Tyj; Ptf1atm1(cre)Hnak (=p48Cre/+-LSL-KrasG12D/+),age rule: age with unit,adult,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.7330988406972185,platform_constant,4.7330988406972185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8573642,,,train,hesrt,samples/GSE279507/GSM8573642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8573643,pancreas,disease,preneoplastic lesion,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3306,Mapping the Evolution of Acinar cell derived Pancreatic Preneoplastic Lesions in a Mouse Model: A Detailed Transcriptomic and Pathological Characterization,GSE279507,GSE279507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:1060215,luna,,Krastm4Tyj; Ptf1atm1(cre)Hnak (=p48Cre/+-LSL-KrasG12D/+),age rule: age with unit,adult,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.435757470268657,platform_constant,4.435757470268657,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8573643,,,train,hesrt,samples/GSE279507/GSM8573643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8573644,pancreas,disease,preneoplastic lesion,pancreas,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2444,Mapping the Evolution of Acinar cell derived Pancreatic Preneoplastic Lesions in a Mouse Model: A Detailed Transcriptomic and Pathological Characterization,GSE279507,GSE279507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:1060215,luna,,Krastm4Tyj; Ptf1atm1(cre)Hnak (=p48Cre/+-LSL-KrasG12D/+),age rule: age with unit,adult,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.970377427362742,platform_constant,3.970377427362742,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8573644,,,train,hesrt,samples/GSE279507/GSM8573644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8573645,pancreas,disease,preneoplastic lesion,pancreas,tumour tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3275,Mapping the Evolution of Acinar cell derived Pancreatic Preneoplastic Lesions in a Mouse Model: A Detailed Transcriptomic and Pathological Characterization,GSE279507,GSE279507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:1060215,luna,,Krastm4Tyj; Ptf1atm1(cre)Hnak (=p48Cre/+-LSL-KrasG12D/+),age rule: age with unit,adult,6 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.83235557081763,platform_constant,4.83235557081763,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8573645,,,train,hesrt,samples/GSE279507/GSM8573645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8576301,bone marrow,disease,acute myeloid leukemia,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2766,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,GSE279576,GSE279576,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone Marrow,MONDO:0018874,luna,AML,Newly diagnosed,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576301,,,train,hesrt,samples/GSE279576/GSM8576301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8576302,skin,disease,acute myeloid leukemia,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3397,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,GSE279576,GSE279576,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0018874,luna,AML,Newly diagnosed,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714281,platform_constant,7.142856785714281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576302,,,train,hesrt,samples/GSE279576/GSM8576302,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": 0.43, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8576303,bone marrow,disease,acute myeloid leukemia,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1544,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,GSE279576,GSE279576,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone Marrow,MONDO:0018874,luna,AML,Newly diagnosed,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576303,,,train,hesrt,samples/GSE279576/GSM8576303,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8576304,lymph node,disease,lymph node disorder;acute myeloid leukemia,mediastinal lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4437,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,GSE279576,GSE279576,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002524,Mediastinal Lymph Node,MONDO:0004928;MONDO:0018874,luna,AML,Newly diagnosed,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576304,,,train,hesrt,samples/GSE279576/GSM8576304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8576305,skin,disease,acute myeloid leukemia,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1442,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,GSE279576,GSE279576,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0018874,luna,AML,Newly diagnosed,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.090499854991791,platform_constant,4.090499854991791,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576305,,,train,hesrt,samples/GSE279576/GSM8576305,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8576306,lymph node,disease,acute myeloid leukemia,mediastinal lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3431,Integrative Spatial Multi-Omics Reveal Niche-Specific Inflammatory Signaling and Differentiation Hierarchies in Acute Myeloid Leukemia,GSE279576,GSE279576,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002524,Mediastinal Lymph Node,MONDO:0018874,luna,AML,Newly diagnosed,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.280999865191321,platform_constant,4.280999865191321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41536977,,GSM8576306,,,train,hesrt,samples/GSE279576/GSM8576306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8577744,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2320,Single cell deletion of the transcription factors Sox9 and Trps1 reveals novel functions in adult cortical astrocytes [Spatial transcriptomics],GSE279676,GSE279676,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,g-Control,age rule: age with unit,adult,12–16 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21866,counts,pixel,4.504487253655969,platform_constant,4.504487253655969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39610085,,GSM8577744,,,test,hesrt,samples/GSE279676/GSM8577744,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8577745,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2386,Single cell deletion of the transcription factors Sox9 and Trps1 reveals novel functions in adult cortical astrocytes [Spatial transcriptomics],GSE279676,GSE279676,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,g-Trps1,age rule: age with unit,adult,12–16 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21866,counts,pixel,4.504487253655969,platform_constant,4.504487253655969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39610085,,GSM8577745,,,test,hesrt,samples/GSE279676/GSM8577745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8577746,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2857,Single cell deletion of the transcription factors Sox9 and Trps1 reveals novel functions in adult cortical astrocytes [Spatial transcriptomics],GSE279676,GSE279676,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,g-Sox9,age rule: age with unit,adult,12–16 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21866,counts,pixel,4.504487253655969,platform_constant,4.504487253655969,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39610085,,GSM8577746,,,test,hesrt,samples/GSE279676/GSM8577746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8577747,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2184,Single cell deletion of the transcription factors Sox9 and Trps1 reveals novel functions in adult cortical astrocytes [Spatial transcriptomics],GSE279676,GSE279676,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,g-Sox9+Trps1,age rule: age with unit,adult,12–16 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21866,counts,pixel,4.277131456111153,platform_constant,4.277131456111153,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39610085,,GSM8577747,,,test,hesrt,samples/GSE279676/GSM8577747,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8586920,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,91345,Reprogramming of epidermal keratinocytes by PITX1 transforms the cutaneous cellular landscape and promotes wound healing.,GSE280088,GSE280088,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Dorsal skin,,luna,,Vehicle & Doxycycline,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,39480496,,GSM8586920,,,train,sda-all,samples/GSE280088/GSM8586920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.76, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8586921,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,182402,Reprogramming of epidermal keratinocytes by PITX1 transforms the cutaneous cellular landscape and promotes wound healing.,GSE280088,GSE280088,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Dorsal skin,,luna,,Vehicle & Doxycycline,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,39480496,,GSM8586921,,,train,sda-all,samples/GSE280088/GSM8586921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8586922,head and neck,normal,,buccal mucosa,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,67803,Reprogramming of epidermal keratinocytes by PITX1 transforms the cutaneous cellular landscape and promotes wound healing.,GSE280088,GSE280088,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0006956,Buccal mucosa,,luna,,Vehicle,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,39480496,,GSM8586922,,,train,sda-all,samples/GSE280088/GSM8586922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8586923,skin,disease,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,174241,Reprogramming of epidermal keratinocytes by PITX1 transforms the cutaneous cellular landscape and promotes wound healing.,GSE280088,GSE280088,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,POD4 wounded dorsal skin,,luna,,Vehicle & Doxycycline,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,39480496,,GSM8586923,,,train,sda-all,samples/GSE280088/GSM8586923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.8, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8591185,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,295169,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591185,,,test,sda-all,samples/GSE280177/GSM8591185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8591186,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,357181,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591186,,,test,sda-all,samples/GSE280177/GSM8591186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8591187,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,365726,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591187,,,test,sda-all,samples/GSE280177/GSM8591187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8591188,brain,disease,Down syndrome;syndromic disease,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,340478,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,MONDO:0008608;MONDO:0002254,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591188,,,test,sda-all,samples/GSE280177/GSM8591188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8591189,brain,disease,Down syndrome;syndromic disease,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,407471,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,MONDO:0008608;MONDO:0002254,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591189,,,test,sda-all,samples/GSE280177/GSM8591189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8591190,brain,disease,Down syndrome;syndromic disease,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,599237,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,MONDO:0008608;MONDO:0002254,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591190,,,test,sda-all,samples/GSE280177/GSM8591190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8591191,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,395806,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591191,,,test,sda-all,samples/GSE280177/GSM8591191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8591192,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,1108910,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591192,,,test,sda-all,samples/GSE280177/GSM8591192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8591193,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,1010190,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591193,,,test,sda-all,samples/GSE280177/GSM8591193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8591194,brain,disease,Down syndrome;syndromic disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,1002879,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,MONDO:0008608;MONDO:0002254,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591194,,,test,sda-all,samples/GSE280177/GSM8591194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8591195,brain,disease,Down syndrome;syndromic disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,678514,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,MONDO:0008608;MONDO:0002254,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591195,,,test,sda-all,samples/GSE280177/GSM8591195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8591196,brain,disease,Down syndrome;syndromic disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,298648,Molecular Cartography of the Human and Mouse Down Syndrome Brain [MERFISH],GSE280177,GSE280177,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain section,MONDO:0008608;MONDO:0002254,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,41027953,,GSM8591196,,,test,sda-all,samples/GSE280177/GSM8591196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8594561,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4269,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumV2],GSE280313,GSE280313,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Cancer,MONDO:0021063,luna,colorectal cancer,Colon Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,34.78942992901159,platform_constant,34.78942992901159,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594561,,,train,hesrt,samples/GSE280313/GSM8594561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8594562,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3887,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumV2],GSE280313,GSE280313,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Normal Adjacent,,luna,,Colon Normal Adjacent,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,42.80179315434508,platform_constant,42.80179315434508,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594562,,,train,hesrt,samples/GSE280313/GSM8594562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8594563,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2638,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumV2],GSE280313,GSE280313,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Normal Adjacent,,luna,,Colon Normal Adjacent,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,43.31533278627761,platform_constant,43.31533278627761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594563,,,train,hesrt,samples/GSE280313/GSM8594563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM8594564,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,H&E,307762,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [Xenium],GSE280314,GSE280314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0021063,luna,colon cancer,colon cancer,luna,not stated,,not stated,,,,,,release v3,imaging-based,10x Genomics Xenium In Situ,,,cell,541,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594564,,,test,hesrt,samples/GSE280314/GSM8594564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594565,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,H&E,340837,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [Xenium],GSE280314,GSE280314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0021063,luna,colon cancer,colon cancer,luna,not stated,,not stated,,,,,,release v3,imaging-based,10x Genomics Xenium In Situ,,,cell,541,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594565,,,test,hesrt,samples/GSE280314/GSM8594565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594566,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,H&E,275998,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [Xenium],GSE280314,GSE280314,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,colon,MONDO:0021063,luna,colon cancer,colon cancer,luna,not stated,,not stated,,,,,,release v3,imaging-based,10x Genomics Xenium In Situ,,,cell,541,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594566,,,test,hesrt,samples/GSE280314/GSM8594566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594567,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,507684,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumHD],GSE280315,GSE280315,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Cancer,MONDO:0021063,luna,colorectal cancer,Colon Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594567,,,test,hesrt,samples/GSE280315/GSM8594567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594568,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,545913,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumHD],GSE280315,GSE280315,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Cancer,MONDO:0021063,luna,colorectal cancer,Colon Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594568,,,test,hesrt,samples/GSE280315/GSM8594568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594569,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,541968,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumHD],GSE280315,GSE280315,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Cancer,MONDO:0021063,luna,colorectal cancer,Colon Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594569,,,test,hesrt,samples/GSE280315/GSM8594569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594570,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,487552,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumHD],GSE280315,GSE280315,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Normal Adjacent,,luna,colorectal cancer,Colon Normal Adjacent,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594570,,,test,hesrt,samples/GSE280315/GSM8594570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8594571,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,435773,Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling [VisiumHD],GSE280315,GSE280315,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Normal Adjacent,,luna,colorectal cancer,Colon Normal Adjacent,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40473992,,GSM8594571,,,test,hesrt,samples/GSE280315/GSM8594571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,normal_but_disease_text
GSM8594572,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4062,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,GSE280316,GSE280316,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,brain (hypothalamus),,luna,,,age rule: age in years,adult,33 years,extracted field,male,GSE280316:v1225A_M,v1225A_M,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.7501803807134255,platform_constant,4.7501803807134255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594572,,,test,hesrt,samples/GSE280316/GSM8594572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594573,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4247,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,GSE280316,GSE280316,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,brain (hypothalamus),,luna,,,age rule: age in years,adult,32 years,extracted field,male,GSE280316:v1735A_M,v1735A_M,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.074515298069279,platform_constant,5.074515298069279,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594573,,,test,hesrt,samples/GSE280316/GSM8594573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594574,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3955,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,GSE280316,GSE280316,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,brain (hypothalamus),,luna,,,age rule: age in years,adult,39 years,extracted field,male,GSE280316:v5459A_M,v5459A_M,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.666395554703863,platform_constant,4.666395554703863,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594574,,,test,hesrt,samples/GSE280316/GSM8594574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594575,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4872,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,GSE280316,GSE280316,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,brain (hypothalamus),,luna,,,age rule: age in years,adult,48 years,extracted field,female,GSE280316:v5993A_F,v5993A_F,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.07451529806925,platform_constant,5.07451529806925,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594575,,,test,hesrt,samples/GSE280316/GSM8594575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594576,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4553,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,GSE280316,GSE280316,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,brain (hypothalamus),,luna,,,age rule: age in years,adult,29 years,extracted field,male,GSE280316:v6197A_M,v6197A_M,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.664590578628688,platform_constant,4.664590578628688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594576,,,test,hesrt,samples/GSE280316/GSM8594576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594577,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4986,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,GSE280316,GSE280316,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,brain (hypothalamus),,luna,,,age rule: age in years,adult,27 years,extracted field,female,GSE280316:v6588A_F,v6588A_F,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.262023511115683,platform_constant,4.262023511115683,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594577,,,test,hesrt,samples/GSE280316/GSM8594577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594578,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4968,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,GSE280316,GSE280316,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,brain (hypothalamus),,luna,,,age rule: age in years,adult,27 years,extracted field,female,GSE280316:v6588B_F,v6588B_F,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.238797747488989,platform_constant,4.238797747488989,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594578,,,test,hesrt,samples/GSE280316/GSM8594578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594579,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4635,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,GSE280316,GSE280316,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,brain (hypothalamus),,luna,,,age rule: age in years,adult,37 years,extracted field,female,GSE280316:v8667A_F,v8667A_F,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.666425962895985,platform_constant,4.666425962895985,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594579,,,test,hesrt,samples/GSE280316/GSM8594579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8594580,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4599,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,GSE280316,GSE280316,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,brain (hypothalamus),,luna,,,age rule: age in years,adult,28 years,extracted field,female,GSE280316:v8741A_F,v8741A_F,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.240163708616329,platform_constant,4.240163708616329,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594580,,,test,hesrt,samples/GSE280316/GSM8594580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8594581,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4772,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus,GSE280316,GSE280316,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,brain (hypothalamus),,luna,,,age rule: age in years,adult,28 years,extracted field,female,GSE280316:v8741B_F,v8741B_F,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.263461311410904,platform_constant,4.263461311410904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8594581,,,test,hesrt,samples/GSE280316/GSM8594581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8595803,heart,perturbation,,heart left ventricle,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,14191,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],GSE280376,GSE280376,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002084,heart left ventricles,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41184578,,GSM8595803,,,train,sda-all,samples/GSE280376/GSM8595803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8595804,heart,perturbation,,heart left ventricle,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,27737,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],GSE280376,GSE280376,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002084,heart left ventricles,,luna,,Cryoablation,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41184578,,GSM8595804,,,train,sda-all,samples/GSE280376/GSM8595804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8595805,heart,perturbation,,heart left ventricle,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,35946,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],GSE280376,GSE280376,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002084,heart left ventricles,,luna,,Cryoablation,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41184578,,GSM8595805,,,train,sda-all,samples/GSE280376/GSM8595805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460459,heart,normal,,heart left ventricle,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,40754,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],GSE280376,GSE280376,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002084,heart left ventricles,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000154469312097,VERIFIED,PARTIAL,FAILED,,,VERIFIED,PASS,,,41184578,,GSM9460459,,,train,sda-all,samples/GSE280376/GSM9460459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460460,heart,perturbation,,heart left ventricle,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,47536,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],GSE280376,GSE280376,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002084,heart left ventricles,,luna,,Cryoablation,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.4999814936667215,VERIFIED,PARTIAL,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,zero_count_observations,VERIFIED,PASS,,,41184578,,GSM9460460,,,train,sda-all,samples/GSE280376/GSM9460460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460461,heart,perturbation,,heart left ventricle,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38903,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],GSE280376,GSE280376,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002084,heart left ventricles,,luna,,Cryoablation,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.4999965668772315,VERIFIED,PARTIAL,FAILED,,zero_count_observations,VERIFIED,PASS,,,41184578,,GSM9460461,,,train,sda-all,samples/GSE280376/GSM9460461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460462,heart,disease,,heart left ventricle,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,46213,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],GSE280376,GSE280376,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002084,heart left ventricles,,luna,,Cryoablation,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000235682300259,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,41184578,,GSM9460462,,,train,sda-all,samples/GSE280376/GSM9460462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460463,heart,perturbation,,heart left ventricle,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,61437,Spatiotemporal dynamics of the cardioimmune niche during lesion repair [spatial],GSE280376,GSE280376,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002084,heart left ventricles,,luna,,Cryoablation,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.49998085532516495,VERIFIED,PARTIAL,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41184578,,GSM9460463,,,train,sda-all,samples/GSE280376/GSM9460463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8598169,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,69884,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,38.99,extracted field,Male,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000098052032945,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598169,,,train,sda-all,samples/GSE280460/GSM8598169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598170,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,70592,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,38.99,extracted field,Male,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999923717361929,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598170,,,train,sda-all,samples/GSE280460/GSM8598170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8598171,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,74669,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,37.33333,extracted field,Female,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000010904174117,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598171,,,train,sda-all,samples/GSE280460/GSM8598171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598172,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,74032,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,28.55578,extracted field,Male,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000034522439586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598172,,,train,sda-all,samples/GSE280460/GSM8598172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598173,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,60608,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,48.15868,extracted field,Female,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999908745802306,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598173,,,train,sda-all,samples/GSE280460/GSM8598173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598174,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,52688,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,48.15868,extracted field,Female,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500002434156078,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598174,,,train,sda-all,samples/GSE280460/GSM8598174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598175,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,65930,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,31.54,extracted field,Male,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000017254071961,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598175,,,train,sda-all,samples/GSE280460/GSM8598175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8598176,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,52813,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,31.54,extracted field,Male,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500005995465248,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598176,,,train,sda-all,samples/GSE280460/GSM8598176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8598177,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,102252,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,27.34839,extracted field,Female,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000081677992682,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598177,,,train,sda-all,samples/GSE280460/GSM8598177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598178,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,97498,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,32.67,extracted field,Male,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999961880282304,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598178,,,train,sda-all,samples/GSE280460/GSM8598178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598179,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,72990,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,32.67,extracted field,Male,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999891096009763,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598179,,,train,sda-all,samples/GSE280460/GSM8598179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598180,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,62834,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,28.19439,extracted field,Female,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999845450049456,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598180,,,train,sda-all,samples/GSE280460/GSM8598180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8598181,brain,normal,,hypothalamus,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,55902,Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus [Xenium],GSE280460,GSE280460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001898,Hypothalamus,,luna,,,age rule: bare number read as years,adult,28.19439,extracted field,Female,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999965668772315,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8598181,,,train,sda-all,samples/GSE280460/GSM8598181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8599602,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1790,Spatially-restricted and ontogenically-distinct hepatic macrophages are required for tissue repair.,GSE280515,GSE280515,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,PBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.501372546294116,platform_constant,4.501372546294116,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39862865,,GSM8599602,,,train,hesrt,samples/GSE280515/GSM8599602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8599603,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1272,Spatially-restricted and ontogenically-distinct hepatic macrophages are required for tissue repair.,GSE280515,GSE280515,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,APAP,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.498849675572209,platform_constant,4.498849675572209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39862865,,GSM8599603,,,train,hesrt,samples/GSE280515/GSM8599603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8599604,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2178,Spatially-restricted and ontogenically-distinct hepatic macrophages are required for tissue repair.,GSE280515,GSE280515,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,APAP,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.826722777878871,platform_constant,4.826722777878871,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39862865,,GSM8599604,,,train,hesrt,samples/GSE280515/GSM8599604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8600886,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,3651,A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation [Spatial Transcriptomics],GSE280570,GSE280570,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,temporal cortex,,luna,,,age rule: age in years,juvenile,15 years,not stated,,GSE280570:P013,P013,,,release v3,sequencing-based,10x Genomics Visium,,,spot,14197,counts,pixel,1.2538260890797304,platform_constant,1.2538260890797304,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567748,,GSM8600886,,,train,hesrt,samples/GSE280570/GSM8600886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8600887,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,3723,A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation [Spatial Transcriptomics],GSE280570,GSE280570,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,temporal cortex,,luna,,,age rule: age in years,juvenile,15 years,not stated,,GSE280570:P013,P013,,,release v3,sequencing-based,10x Genomics Visium,,,spot,14197,counts,pixel,1.2538260890797304,platform_constant,1.2538260890797304,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567748,,GSM8600887,,,train,hesrt,samples/GSE280570/GSM8600887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8600888,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,3574,A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation [Spatial Transcriptomics],GSE280570,GSE280570,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,temporal cortex,,luna,,,age rule: age in years,adult,31 years,not stated,,GSE280570:P015,P015,,,release v3,sequencing-based,10x Genomics Visium,,,spot,14197,counts,pixel,1.3065478400923494,platform_constant,1.3065478400923494,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567748,,GSM8600888,,,train,hesrt,samples/GSE280570/GSM8600888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8600889,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,3376,A temporal cortex cell atlas highlights gene expression dynamics during human brain maturation [Spatial Transcriptomics],GSE280570,GSE280570,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,temporal cortex,,luna,,,age rule: age in years,adult,31 years,not stated,,GSE280570:P015,P015,,,release v3,sequencing-based,10x Genomics Visium,,,spot,14197,counts,pixel,1.25,platform_constant,1.25,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39567748,,GSM8600889,,,train,hesrt,samples/GSE280570/GSM8600889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602654,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,230258,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,GSE280634,GSE280634,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary pancreatic ductal adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,280,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39535921,,GSM8602654,,,val,sda-all,samples/GSE280634/GSM8602654,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602655,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,118415,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,GSE280634,GSE280634,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary pancreatic ductal adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,280,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39535921,,GSM8602655,,,val,sda-all,samples/GSE280634/GSM8602655,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602656,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,80536,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,GSE280634,GSE280634,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary pancreatic ductal adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,280,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39535921,,GSM8602656,,,val,sda-all,samples/GSE280634/GSM8602656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602657,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,19458,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,GSE280634,GSE280634,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary pancreatic ductal adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,280,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39535921,,GSM8602657,,,val,sda-all,samples/GSE280634/GSM8602657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602658,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,66047,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,GSE280634,GSE280634,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary pancreatic ductal adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,280,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39535921,,GSM8602658,,,val,sda-all,samples/GSE280634/GSM8602658,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602659,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,26735,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,GSE280634,GSE280634,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary pancreatic ductal adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,280,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39535921,,GSM8602659,,,val,sda-all,samples/GSE280634/GSM8602659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602660,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,118355,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,GSE280634,GSE280634,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary pancreatic ductal adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,280,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39535921,,GSM8602660,,,val,sda-all,samples/GSE280634/GSM8602660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8602661,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,34820,Xenium Spatial Transcriptomics with human breast cell typing panel in human treatment naïve primary PDAC,GSE280634,GSE280634,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,Primary pancreatic ductal adenocarcinoma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,280,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39535921,,GSM8602661,,,val,sda-all,samples/GSE280634/GSM8602661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8604632,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium CytAssist,True,H&E,3055,Spatial component of: CELSR3 deficiency leads to tic-related behaviors and dopaminergic alterations in the striatum,GSE280709,GSE280709,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,wild type,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist Spatial Gene Expression for FFPE v2,,,spot,19465,counts,pixel,4.095795299240598,platform_constant,4.095795299240598,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40155412,10.1038/s41380-025-02970-w,GSM8604632,,,train,hesrt,samples/GSE280709/GSM8604632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8604633,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium CytAssist,True,H&E,3445,Spatial component of: CELSR3 deficiency leads to tic-related behaviors and dopaminergic alterations in the striatum,GSE280709,GSE280709,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Celsr3 heterozygous,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist Spatial Gene Expression for FFPE v2,,,spot,19465,counts,pixel,3.863979079978399,platform_constant,3.863979079978399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40155412,10.1038/s41380-025-02970-w,GSM8604633,,,train,hesrt,samples/GSE280709/GSM8604633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8604634,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2793,Spatial component of: CELSR3 deficiency leads to tic-related behaviors and dopaminergic alterations in the striatum,GSE280709,GSE280709,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain control.1,,luna,,wild type biol rep 2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,FAIL,,,40155412,,GSM8604634,,,train,sda-all,samples/GSE280709/GSM8604634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8604635,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium CytAssist,True,H&E,3168,Spatial component of: CELSR3 deficiency leads to tic-related behaviors and dopaminergic alterations in the striatum,GSE280709,GSE280709,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Celsr3 heterozygous,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium CytAssist Spatial Gene Expression for FFPE v2,,,spot,19465,counts,pixel,5.495541433136186,platform_constant,5.495541433136186,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40155412,10.1038/s41380-025-02970-w,GSM8604635,,,train,hesrt,samples/GSE280709/GSM8604635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8605231,esophagus,perturbation,,esophagus,primary tissue,Sus scrofa,pig,adult,unknown,Visium,Visium,True,H&E-like (heuristic),2897,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,luna,adult,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.273413839074053,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605231,,,train,sda-all,samples/GSE280737/GSM8605231,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.58, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.91}",sample_kind,low_confidence_annotation
GSM8605232,esophagus,normal,,esophagus,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2976,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.564069398170051,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605232,,,train,sda-all,samples/GSE280737/GSM8605232,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8605233,esophagus,perturbation,,esophagus,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2164,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.116672931172808,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605233,,,train,sda-all,samples/GSE280737/GSM8605233,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8605236,esophagus,perturbation,,esophagus,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2298,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.121971920040989,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605236,,,train,sda-all,samples/GSE280737/GSM8605236,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.52, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.73}",sample_kind,low_confidence_annotation
GSM8605237,esophagus,normal,,esophagus,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2801,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.097377352597521,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605237,,,train,sda-all,samples/GSE280737/GSM8605237,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8605238,esophagus,normal,,esophagus,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2532,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.025586115133708,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605238,,,train,sda-all,samples/GSE280737/GSM8605238,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8605239,esophagus,normal,,esophagus,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3004,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.348647482958716,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605239,,,train,sda-all,samples/GSE280737/GSM8605239,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8605243,esophagus,perturbation,,esophagus,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3707,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.096391747539663,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605243,,,train,sda-all,samples/GSE280737/GSM8605243,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM8605244,esophagus,perturbation,,esophagus,primary tissue,Sus scrofa,pig,adult,unknown,Visium,Visium,True,H&E-like (heuristic),2768,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,luna,adult,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.109435383957746,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605244,,,train,sda-all,samples/GSE280737/GSM8605244,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.67}",sample_kind,low_confidence_annotation
GSM8605245,esophagus,perturbation,,esophagus,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2637,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.15819398371339,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605245,,,train,sda-all,samples/GSE280737/GSM8605245,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8605246,esophagus,perturbation,,esophagus,engineered tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3471,Functional Integration of Autologous Tissue-Engineered Grafts in a Pre-Clinical Esophageal Defect Model,GSE280737,GSE280737,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001043,Esophagus,,luna,,,rule: culture or organoid (culture time is not a life stage),adult,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,22040,counts,um,1.0,verified,4.220607398327829,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8605246,,,train,sda-all,samples/GSE280737/GSM8605246,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.56}",sample_kind;life_stage,low_confidence_annotation
GSM8605279,brain,disease,melanoma;metastatic malignant neoplasm,brain,metastasis,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,163281,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],GSE280741,GSE280741,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0005105;MONDO:0024880,luna,,humanized,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000092661230541,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39831781,,GSM8605279,,,train,sda-all,samples/GSE280741/GSM8605279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.38, ""disease_status"": 0.28, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind;disease_status,feature_species_differs;low_confidence_annotation
GSM8605280,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,121496,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],GSE280741,GSE280741,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0000955,brain,,luna,,non-humanized,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000086278299282,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,39831781,,GSM8605280,,,train,sda-all,samples/GSE280741/GSM8605280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM8605281,liver,disease,metastatic malignant neoplasm in the liver;melanoma,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,154482,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],GSE280741,GSE280741,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0002107,liver,MONDO:1060297;MONDO:0005105,luna,,humanized,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999919417967491,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39831781,,GSM8605281,,,train,sda-all,samples/GSE280741/GSM8605281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM8605282,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,189840,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],GSE280741,GSE280741,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0002107,liver,,luna,,non-humanized,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999021909233177,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,39831781,,GSM8605282,,,train,sda-all,samples/GSE280741/GSM8605282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,feature_species_differs
GSM8605283,small intestine,not stated,,intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,315017,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],GSE280741,GSE280741,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0000160,intestine,,luna,,humanized,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000074870991522,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39831781,,GSM8605283,,,train,sda-all,samples/GSE280741/GSM8605283,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.8, ""disease_status"": 0.24, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM8605284,small intestine,normal,,intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,117935,Upregulation of the MBM CTC Signature and CTC:B Cell Clusters Associate with Secondary Liver Metastasis: a Melanoma Brain-Liver Metastasis Axis [Xenium],GSE280741,GSE280741,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0000160,intestine,,luna,,non-humanized,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000085320072156,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,39831781,,GSM8605284,,,train,sda-all,samples/GSE280741/GSM8605284,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.97, ""disease_status"": 0.67, ""uberon"": 0.98, ""life_stage"": 1.0}",,feature_species_differs
GSM8607200,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,451265,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607200,,,test,sda-all,samples/GSE280895/GSM8607200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8607201,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,362273,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607201,,,test,sda-all,samples/GSE280895/GSM8607201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607202,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,374351,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607202,,,test,sda-all,samples/GSE280895/GSM8607202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607203,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,254026,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607203,,,test,sda-all,samples/GSE280895/GSM8607203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607204,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,335166,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607204,,,test,sda-all,samples/GSE280895/GSM8607204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8607205,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,380194,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607205,,,test,sda-all,samples/GSE280895/GSM8607205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8607206,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,385008,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607206,,,test,sda-all,samples/GSE280895/GSM8607206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM8607207,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,330972,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607207,,,test,sda-all,samples/GSE280895/GSM8607207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM8607208,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,266297,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,,luna,,uninfected,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,537,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607208,,,test,sda-all,samples/GSE280895/GSM8607208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8607209,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,218147,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,,luna,,uninfected,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607209,,,test,sda-all,samples/GSE280895/GSM8607209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8607210,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,469009,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,39843748,,GSM8607210,,,test,sda-all,samples/GSE280895/GSM8607210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607211,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,295866,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,499,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607211,,,test,sda-all,samples/GSE280895/GSM8607211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8607212,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,225052,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,infection with LCMV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,465,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607212,,,test,sda-all,samples/GSE280895/GSM8607212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607213,small intestine,normal,,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,91339,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002116,Ileum,,luna,,,luna,not stated,,not stated,,GSE280895:donor1,donor1,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,533,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607213,,,test,sda-all,samples/GSE280895/GSM8607213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607214,small intestine,normal,,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,94150,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002116,Ileum,,luna,,,luna,not stated,,not stated,,GSE280895:donor1,donor1,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,533,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607214,,,test,sda-all,samples/GSE280895/GSM8607214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8607215,small intestine,normal,,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,63567,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002116,Ileum,,luna,,,luna,not stated,,not stated,,GSE280895:donor2,donor2,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607215,,,test,sda-all,samples/GSE280895/GSM8607215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8607216,small intestine,normal,,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,66037,Tissue-resident memory CD8 T Cell Diversity is Spatiotemporally Imprinted,GSE280895,GSE280895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002116,Ileum,,luna,,,luna,not stated,,not stated,,GSE280895:donor2,donor2,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,538,counts,um,1.0,verified,,ABSENT,ABSENT,FAILED,,,VERIFIED,PASS,,,39843748,,GSM8607216,,,test,sda-all,samples/GSE280895/GSM8607216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8608325,oral cavity,disease,lip and oral cavity carcinoma;malignant tumor of neck,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2399,Single-cell sequencing across radiation treatment timepoints in head and neck cancer,GSE280982,GSE280982,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral cancer,MONDO:0023644;MONDO:0021310,luna,,Pre-Treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.01902241936398,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40593620,,GSM8608325,,,train,sda-all,samples/GSE280982/GSM8608325,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8608332,oral cavity,disease,lip and oral cavity carcinoma;malignant tumor of neck,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1436,Single-cell sequencing across radiation treatment timepoints in head and neck cancer,GSE280982,GSE280982,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral cancer,MONDO:0023644;MONDO:0021310,luna,,6 Weeks Post-Radiation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.98160469154036,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40593620,,GSM8608332,,,train,sda-all,samples/GSE280982/GSM8608332,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8608415,brain,disease,diffuse intrinsic pontine glioma,midbrain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3658,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,GSE280990,GSE280990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001891,DIPG tumor-infiltrated brainstem,MONDO:0006033,luna,diffuse intrinsic pontine glioma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.165909184106821,platform_constant,6.165909184106821,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608415,,,train,hesrt,samples/GSE280990/GSM8608415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM8608416,brain,disease,diffuse intrinsic pontine glioma,pons,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4919,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,GSE280990,GSE280990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,DIPG tumor-infiltrated brainstem,MONDO:0006033,luna,diffuse intrinsic pontine glioma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.490492154509978,platform_constant,6.490492154509978,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608416,,,train,hesrt,samples/GSE280990/GSM8608416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8608417,brain,disease,diffuse intrinsic pontine glioma,pons,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4235,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,GSE280990,GSE280990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,DIPG tumor-infiltrated brainstem,MONDO:0006033,luna,diffuse intrinsic pontine glioma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.6327167383938646,platform_constant,4.6327167383938646,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608417,,,train,hesrt,samples/GSE280990/GSM8608417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8608418,brain,disease,diffuse intrinsic pontine glioma,pons,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,GSE280990,GSE280990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,DIPG tumor-infiltrated brainstem,MONDO:0006033,luna,diffuse intrinsic pontine glioma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.130743545277269,platform_constant,5.130743545277269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608418,,,train,hesrt,samples/GSE280990/GSM8608418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8608419,brain,disease,diffuse intrinsic pontine glioma,pons,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3127,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,GSE280990,GSE280990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,DIPG tumor-infiltrated brainstem,MONDO:0006033,luna,diffuse intrinsic pontine glioma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.59926078646137,platform_constant,6.59926078646137,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608419,,,train,hesrt,samples/GSE280990/GSM8608419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8608420,brain,disease,diffuse intrinsic pontine glioma,medulla of organ,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1958,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,GSE280990,GSE280990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000958,DIPG tumor-infiltrated brainstem,MONDO:0006033,luna,diffuse intrinsic pontine glioma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9249862496150274,platform_constant,3.9249862496150274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608420,,,train,hesrt,samples/GSE280990/GSM8608420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8608421,brain,disease,diffuse intrinsic pontine glioma,medulla of organ,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2712,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,GSE280990,GSE280990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000958,DIPG tumor-infiltrated brainstem,MONDO:0006033,luna,diffuse intrinsic pontine glioma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9117023094559134,platform_constant,3.9117023094559134,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608421,,,train,hesrt,samples/GSE280990/GSM8608421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8608422,brain,disease,diffuse intrinsic pontine glioma,brainstem,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3171,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,GSE280990,GSE280990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002298,DIPG tumor-infiltrated brainstem,MONDO:0006033,luna,diffuse intrinsic pontine glioma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.130597207322755,platform_constant,5.130597207322755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608422,,,train,hesrt,samples/GSE280990/GSM8608422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8608423,spinal cord,disease,diffuse intrinsic pontine glioma,spinal cord,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3423,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,GSE280990,GSE280990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,DIPG tumor-infiltrated brainstem,MONDO:0006033,luna,diffuse intrinsic pontine glioma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.538935407241965,platform_constant,5.538935407241965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608423,,,train,hesrt,samples/GSE280990/GSM8608423,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8608424,spinal cord,disease,diffuse intrinsic pontine glioma,spinal cord,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2744,Spatial Analysis of a Complete DIPG-Infiltrated Brainstem Reveals Novel Ligand-Receptor Mediators of Tumor-to-TME Crosstalk,GSE280990,GSE280990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002240,DIPG tumor-infiltrated brainstem,MONDO:0006033,luna,diffuse intrinsic pontine glioma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.16136529592397,platform_constant,5.16136529592397,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39972389,,GSM8608424,,,train,hesrt,samples/GSE280990/GSM8608424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8610676,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1650,Hair Follicle Epithelial Stem Cells Contributing to Interfollicular Epidermis during Homeostasis,GSE281086,GSE281086,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.198575707421534,platform_constant,4.198575707421534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40627455,,GSM8610676,,,train,hesrt,samples/GSE281086/GSM8610676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8610677,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1752,Hair Follicle Epithelial Stem Cells Contributing to Interfollicular Epidermis during Homeostasis,GSE281086,GSE281086,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.3252682691778395,platform_constant,4.3252682691778395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40627455,,GSM8610677,,,train,hesrt,samples/GSE281086/GSM8610677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM8610678,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1556,Hair Follicle Epithelial Stem Cells Contributing to Interfollicular Epidermis during Homeostasis,GSE281086,GSE281086,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.327040201438236,platform_constant,4.327040201438236,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40627455,,GSM8610678,,,train,hesrt,samples/GSE281086/GSM8610678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8610679,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1462,Hair Follicle Epithelial Stem Cells Contributing to Interfollicular Epidermis during Homeostasis,GSE281086,GSE281086,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,4.3208384592939,platform_constant,4.3208384592939,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40627455,,GSM8610679,,,train,hesrt,samples/GSE281086/GSM8610679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8616489,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,88480,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 42 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000267225785232,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616489,,,val,sda-all,samples/GSE281265/GSM8616489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8616490,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,99258,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 42 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999814936667215,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616490,,,val,sda-all,samples/GSE281265/GSM8616490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8616491,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,17668,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 21 and 42 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,517,counts,um,1.0,verified,0.5000613246116108,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616491,,,val,sda-all,samples/GSE281265/GSM8616491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8616492,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,87008,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 21 and 42 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.4999589827727645,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616492,,,val,sda-all,samples/GSE281265/GSM8616492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8616493,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,149446,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 21 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999691611842106,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616493,,,val,sda-all,samples/GSE281265/GSM8616493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM8616494,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,48324,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 21 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,539,counts,um,1.0,verified,0.5000613246116108,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616494,,,val,sda-all,samples/GSE281265/GSM8616494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8616495,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,89614,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 42 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000041118421052,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616495,,,val,sda-all,samples/GSE281265/GSM8616495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8616496,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,99372,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 42 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000041118421052,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616496,,,val,sda-all,samples/GSE281265/GSM8616496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM8616497,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,8954,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 21 and 42 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,504,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616497,,,val,sda-all,samples/GSE281265/GSM8616497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8616498,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,91045,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 21 and 42 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49995917256396294,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616498,,,val,sda-all,samples/GSE281265/GSM8616498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8616499,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,149417,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 21 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999671214861088,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616499,,,val,sda-all,samples/GSE281265/GSM8616499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8616500,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,52971,A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [Xenium],GSE281265,GSE281265,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000029,lymph node,,luna,,Immunized 21 days prior to harvest,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000408719346049,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40998762,,GSM8616500,,,val,sda-all,samples/GSE281265/GSM8616500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8651954,pancreas,disease,malignant pancreatic neoplasm;metastatic malignant neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3717,NFE2-driven neutrophil polarization promotes pancreatic cancer liver metastasis progression,GSE281288,GSE281288,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0009831;MONDO:0024880,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.8307021331391615,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39827463,,GSM8651954,,,train,sda-all,samples/GSE281288/GSM8651954,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8651955,liver,disease,metastatic malignant neoplasm in the liver;malignant pancreatic neoplasm,liver,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2806,NFE2-driven neutrophil polarization promotes pancreatic cancer liver metastasis progression,GSE281288,GSE281288,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:1060297;MONDO:0009831,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.4374095161792346,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39827463,,GSM8651955,,,train,sda-all,samples/GSE281288/GSM8651955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8618646,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1327,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32738,counts,um,1.0,verified,4.576557648643502,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618646,,,test,sda-all,samples/GSE281317/GSM8618646,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8618647,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),907,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32738,counts,um,1.0,verified,4.661522166134551,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618647,,,test,sda-all,samples/GSE281317/GSM8618647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8618648,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1401,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32738,counts,um,1.0,verified,4.672414014584598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618648,,,test,sda-all,samples/GSE281317/GSM8618648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM8618649,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1156,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32738,counts,um,1.0,verified,4.672291099408858,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618649,,,test,sda-all,samples/GSE281317/GSM8618649,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8618650,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1386,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32738,counts,um,1.0,verified,4.684630455381584,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618650,,,test,sda-all,samples/GSE281317/GSM8618650,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8618651,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1684,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,6.846725050419788,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618651,,,test,sda-all,samples/GSE281317/GSM8618651,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618652,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,907,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,6.782591530401471,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618652,,,test,sda-all,samples/GSE281317/GSM8618652,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618653,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,undetermined,152,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,13.117375656409834,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618653,,,test,sda-all,samples/GSE281317/GSM8618653,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8618654,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1133,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,3.8766933386479763,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618654,,,test,sda-all,samples/GSE281317/GSM8618654,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8618655,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),771,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,3.7658785039160425,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618655,,,test,sda-all,samples/GSE281317/GSM8618655,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618656,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),436,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,3.806928994368646,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618656,,,test,sda-all,samples/GSE281317/GSM8618656,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8618657,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,150,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,4.090698532680941,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618657,,,test,sda-all,samples/GSE281317/GSM8618657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8618658,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),182,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,4.107477993770303,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618658,,,test,sda-all,samples/GSE281317/GSM8618658,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM8618659,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),159,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,3.8794609642085582,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618659,,,test,sda-all,samples/GSE281317/GSM8618659,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8618660,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,478,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,6.993391312272474,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618660,,,test,sda-all,samples/GSE281317/GSM8618660,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618661,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,228,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,6.997303962923091,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618661,,,test,sda-all,samples/GSE281317/GSM8618661,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618662,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,329,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,6.066758427567837,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618662,,,test,sda-all,samples/GSE281317/GSM8618662,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618663,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),784,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,4.102525482246861,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618663,,,test,sda-all,samples/GSE281317/GSM8618663,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.98, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8618664,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),856,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,4.098079838188341,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618664,,,test,sda-all,samples/GSE281317/GSM8618664,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8618665,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1784,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,4.111596157787699,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618665,,,test,sda-all,samples/GSE281317/GSM8618665,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8618666,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1032,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,4.105941103663099,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618666,,,test,sda-all,samples/GSE281317/GSM8618666,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 0.73}",,
GSM8618667,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2310,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,6.8130875314314086,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618667,,,test,sda-all,samples/GSE281317/GSM8618667,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8618668,bone,normal,,ilium,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,2264,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,fetal,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,6.828955416599126,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618668,,,test,sda-all,samples/GSE281317/GSM8618668,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8618669,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2308,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,7.599074639506731,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618669,,,test,sda-all,samples/GSE281317/GSM8618669,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8618670,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,894,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,7.60984452450296,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618670,,,test,sda-all,samples/GSE281317/GSM8618670,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",,
GSM8618671,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1367,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,7.613629354900966,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618671,,,test,sda-all,samples/GSE281317/GSM8618671,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8618672,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,773,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,7.613428253295643,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618672,,,test,sda-all,samples/GSE281317/GSM8618672,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM8618673,bone,normal,,ilium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1007,single-cell multiomics data for the developing human pelvic girdle [spatial],GSE281317,GSE281317,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001273,ilium,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,36601,counts,um,1.0,verified,7.624020563894754,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40866708,,GSM8618673,,,test,sda-all,samples/GSE281317/GSM8618673,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM8621905,brain,disease,breast cancer,brain,metastasis,Homo sapiens,human,adult,female,CosMx,CosMx,False,,156351,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,GSE281488,GSE281488+GSE281492,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Brain metastatic Breast cancer,MONDO:0007254,luna,,,age rule: age in years,adult,37 years,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41923644,,GSM8621905,,,train,sda-all,samples/GSE281488/GSM8621905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9285239,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,120339,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,GSE281488,GSE281488+GSE281492,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,Primary Breast cancer,MONDO:0005494,luna,,,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41923644,,GSM9285239,,,train,sda-all,samples/GSE281488/GSM9285239,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9285240,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,98707,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,GSE281488,GSE281488+GSE281492,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,Primary Breast cancer,MONDO:0005494,luna,,,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41923644,,GSM9285240,,,train,sda-all,samples/GSE281488/GSM9285240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9285241,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,118738,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,GSE281488,GSE281488+GSE281492,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,Primary Breast cancer,MONDO:0005494,luna,,,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41923644,,GSM9285241,,,train,sda-all,samples/GSE281488/GSM9285241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9285242,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,16430,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,GSE281488,GSE281488+GSE281492,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,Primary Breast cancer,MONDO:0005494,luna,,,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41923644,,GSM9285242,,,train,sda-all,samples/GSE281488/GSM9285242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9285243,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,365857,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,GSE281488,GSE281488+GSE281492,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,Primary Breast cancer,MONDO:0005494,luna,,,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41923644,,GSM9285243,,,train,sda-all,samples/GSE281488/GSM9285243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9285244,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,118994,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,GSE281488,GSE281488+GSE281492,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,Primary Breast cancer,MONDO:0005494,luna,,,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41923644,,GSM9285244,,,train,sda-all,samples/GSE281488/GSM9285244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9285245,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,177895,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,GSE281488,GSE281488+GSE281492,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,Primary Breast cancer,MONDO:0005494,luna,,,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41923644,,GSM9285245,,,train,sda-all,samples/GSE281488/GSM9285245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9285246,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,86518,In situ single-cell profiling of a brain metastasis from a HER2+ Breast Cancer Patient and 8 primary tumors from TNBC patients.,GSE281488,GSE281488+GSE281492,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,Primary Breast cancer,MONDO:0005494,luna,,,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41923644,,GSM9285246,,,train,sda-all,samples/GSE281488/GSM9285246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8621906,lung,disease,breast cancer,lung,metastasis,Mus musculus,house mouse,adult,female,CosMx,CosMx,False,,38384,In situ single-cell profiling of lung metastases from the MMTV-PyMT mouse model of metastatic breast cancer,GSE281489,GSE281489+GSE281492,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0007254,luna,,,age rule: age with unit,adult,5.5 months,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,1011,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41923644,,GSM8621906,,,train,sda-all,samples/GSE281489/GSM8621906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8627601,liver,disease,hepatocellular carcinoma,liver,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1714,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,normal adjacent liver tissue,luna,not stated,,extracted field,female,GSE281759:A009,A009,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.015060633494453,platform_constant,4.015060633494453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627601,,,val,hesrt,samples/GSE281759/GSM8627601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8627602,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1762,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,female,GSE281759:A009,A009,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8760854559127633,platform_constant,3.8760854559127633,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627602,,,val,hesrt,samples/GSE281759/GSM8627602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627603,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1565,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,female,GSE281759:A009,A009,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.015060633494461,platform_constant,4.015060633494461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627603,,,val,hesrt,samples/GSE281759/GSM8627603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627604,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1329,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,female,GSE281759:A009,A009,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8760854559127704,platform_constant,3.8760854559127704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627604,,,val,hesrt,samples/GSE281759/GSM8627604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8627605,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,2356,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,female,GSE281759:A009,A009,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.015060633494461,platform_constant,4.015060633494461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627605,,,val,hesrt,samples/GSE281759/GSM8627605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8627606,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1936,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,female,GSE281759:A009,A009,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8760854559127704,platform_constant,3.8760854559127704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627606,,,val,hesrt,samples/GSE281759/GSM8627606,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8627607,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1187,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,male,GSE281759:B0013,B0013,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8760854559127704,platform_constant,3.8760854559127704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627607,,,val,hesrt,samples/GSE281759/GSM8627607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8627608,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1265,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,male,GSE281759:B0013,B0013,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8760854559127704,platform_constant,3.8760854559127704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627608,,,val,hesrt,samples/GSE281759/GSM8627608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627609,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1485,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,male,GSE281759:B0013,B0013,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.015060633494471,platform_constant,4.015060633494471,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627609,,,val,hesrt,samples/GSE281759/GSM8627609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627610,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1898,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,male,GSE281759:B0013,B0013,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.015060633494461,platform_constant,4.015060633494461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627610,,,val,hesrt,samples/GSE281759/GSM8627610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627611,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1490,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,male,GSE281759:B0013,B0013,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8760854559127704,platform_constant,3.8760854559127704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627611,,,val,hesrt,samples/GSE281759/GSM8627611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627612,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,1489,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,female,GSE281759:C004,C004,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8760854559127624,platform_constant,3.8760854559127624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627612,,,val,hesrt,samples/GSE281759/GSM8627612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8627613,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,937,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,female,GSE281759:C004,C004,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9828311742323046,platform_constant,3.9828311742323046,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627613,,,val,hesrt,samples/GSE281759/GSM8627613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627614,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,2276,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,male,GSE281759:C008,C008,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8760854559127624,platform_constant,3.8760854559127624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627614,,,val,hesrt,samples/GSE281759/GSM8627614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8627615,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1310,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,male,GSE281759:C008,C008,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.876085455912768,platform_constant,3.876085455912768,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627615,,,val,hesrt,samples/GSE281759/GSM8627615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8627616,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1494,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,male,GSE281759:C008,C008,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.015060633494461,platform_constant,4.015060633494461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627616,,,val,hesrt,samples/GSE281759/GSM8627616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8627617,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1731,Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection,GSE281759,GSE281759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0007256,luna,hepatocellular carcinoma,hepatocellular carcinoma tumor tissue,luna,not stated,,extracted field,male,GSE281759:C008,C008,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8760854559127633,platform_constant,3.8760854559127633,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41950768,,GSM8627617,,,val,hesrt,samples/GSE281759/GSM8627617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8630048,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1986,A blueprint for local and distal glioblastoma invasion programs,GSE281796,GSE281796,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,invasion,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.4197672886271455,platform_constant,4.4197672886271455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41844611,,GSM8630048,,,test,hesrt,samples/GSE281796/GSM8630048,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM8630049,brain,disease,glioblastoma,brain,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2330,A blueprint for local and distal glioblastoma invasion programs,GSE281796,GSE281796,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,68886,counts,pixel,4.420349133107466,platform_constant,4.420349133107466,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41844611,,GSM8630049,,,test,hesrt,samples/GSE281796/GSM8630049,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 0.56, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8633891,head and neck,disease,malignant tumor of neck;head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1187,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,GSE281978,GSE281978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,HNSCC primary tumor,MONDO:0021310;MONDO:0010150,luna,,"HPV-negative, PT2",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9863462596350483,platform_constant,3.9863462596350483,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633891,,,train,hesrt,samples/GSE281978/GSM8633891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.67, ""life_stage"": 0.99}",,
GSM8633892,head and neck,disease,malignant tumor of neck;head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1579,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,GSE281978,GSE281978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,HNSCC primary tumor,MONDO:0021310;MONDO:0010150,luna,,"HPV-negative, LNMT2",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.892751871846451,platform_constant,3.892751871846451,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633892,,,train,hesrt,samples/GSE281978/GSM8633892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8633893,head and neck,disease,malignant tumor of neck;head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1359,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,GSE281978,GSE281978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,HNSCC primary tumor,MONDO:0021310;MONDO:0010150,luna,,"HPV-positive, PT3",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8560360020834157,platform_constant,3.8560360020834157,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633893,,,train,hesrt,samples/GSE281978/GSM8633893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.78, ""life_stage"": 0.99}",,
GSM8633894,head and neck,disease,malignant tumor of neck;head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1908,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,GSE281978,GSE281978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,HNSCC primary tumor,MONDO:0021310;MONDO:0010150,luna,,"HPV-positive, LNMT3",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8675632995753024,platform_constant,3.8675632995753024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633894,,,train,hesrt,samples/GSE281978/GSM8633894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8633895,head and neck,disease,malignant tumor of neck;head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1195,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,GSE281978,GSE281978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,HNSCC primary tumor,MONDO:0021310;MONDO:0010150,luna,,"HPV-negative, PT1",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.869164456483085,platform_constant,3.869164456483085,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633895,,,train,hesrt,samples/GSE281978/GSM8633895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM8633896,head and neck,disease,malignant tumor of neck;head and neck squamous cell carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1439,Deciphering head and neck cancer microenvironment: Single‐cell and spatial transcriptomics reveals human papillomavirus‐associated differences,GSE281978,GSE281978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,HNSCC primary tumor,MONDO:0021310;MONDO:0010150,luna,,"HPV-negative, LNMT1",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.851873151854416,platform_constant,3.851873151854416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,38235919,10.1002/jmv.29386,GSM8633896,,,train,hesrt,samples/GSE281978/GSM8633896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM8634190,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,1821,Cell competition drives bronchiolization and pulmonary fibrosis,GSE282002,GSE282002,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,Bleomycin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.177861091739469,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,clearly fluorescence; the fluorescence type should be stated,39639058,,GSM8634190,,,val,sda-all,samples/GSE282002/GSM8634190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634191,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2027,Cell competition drives bronchiolization and pulmonary fibrosis,GSE282002,GSE282002,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,Bleomycin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.047435872186039,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,clearly fluorescence; the fluorescence type should be stated,39639058,,GSM8634191,,,val,sda-all,samples/GSE282002/GSM8634191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8634192,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,3178,Cell competition drives bronchiolization and pulmonary fibrosis,GSE282002,GSE282002,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,Bleomycin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.049741580714911,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,clearly fluorescence; the fluorescence type should be stated,39639058,,GSM8634192,,,val,sda-all,samples/GSE282002/GSM8634192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634193,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,3963,Cell competition drives bronchiolization and pulmonary fibrosis,GSE282002,GSE282002,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,Bleomycin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.064392169211595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,clearly fluorescence; the fluorescence type should be stated,39639058,,GSM8634193,,,val,sda-all,samples/GSE282002/GSM8634193,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634194,lung,disease,pulmonary fibrosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,3735,Cell competition drives bronchiolization and pulmonary fibrosis,GSE282002,GSE282002,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0002771,luna,,Bleomycin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.042369069617337,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,clearly fluorescence; the fluorescence type should be stated,39639058,,GSM8634194,,,val,sda-all,samples/GSE282002/GSM8634194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634986,skeletal muscle,disease,,hindlimb stylopod,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),76899,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial,GSE282057,GSE282057,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000376,ASPS thigh primary tumor,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18086,counts,um,1.0,verified,3.73656463214597,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8634986,,,train,sda-all,samples/GSE282057/GSM8634986,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8634987,lung,disease,,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),1700,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial,GSE282057,GSE282057,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,ASPS lung needle biopsy,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18086,counts,um,1.0,verified,0.5000146493582549,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8634987,,,train,sda-all,samples/GSE282057/GSM8634987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634988,lung,disease,,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),3048,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial,GSE282057,GSE282057,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,ASPS lung needle biopsy,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18086,counts,um,1.0,verified,0.49996387393287484,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8634988,,,train,sda-all,samples/GSE282057/GSM8634988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8634989,skeletal muscle,disease,,skeletal muscle tissue,xenograft,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),23134,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial,GSE282057,GSE282057,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0001134,Intramuscular tumor of a PDX-derived ASPS cell line,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18086,counts,um,1.0,verified,0.8554409143218548,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8634989,,,train,sda-all,samples/GSE282057/GSM8634989,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM8635038,kidney,disease,ureteral obstruction,kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,523855,"Nanostring CosMx 6,000-plex RNA profiling of human kidney nephrectomy specimens",GSE282059,GSE282059,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,"Ureteral obstruction (UUO, n=5) and healthy kidneys (n=2)",MONDO:0003329,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,5749,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40399382,,GSM8635038,,,train,sda-all,samples/GSE282059/GSM8635038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8636483,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,434666,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",GSE282123,GSE282123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,,MONDO:0005101,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hColon_290g,xenium-1.6.0.8,cell,541,counts,um,1.0,verified,0.4999930964653903,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM8636483,,,val,sda-all,samples/GSE282123/GSM8636483,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8636484,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,424230,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",GSE282123,GSE282123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,,MONDO:0005101,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hColon_290g,xenium-1.6.0.8,cell,541,counts,um,1.0,verified,0.5000065413632201,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM8636484,,,val,sda-all,samples/GSE282123/GSM8636484,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9282953,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,372549,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",GSE282123,GSE282123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,,MONDO:0005101,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hColon_112g,xenium-3.0.0.8,cell,10870,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM9282953,,,val,sda-all,samples/GSE282123/GSM9282953,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9282954,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,424697,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",GSE282123,GSE282123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,,MONDO:0005101,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hColon_290g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49998817407757806,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM9282954,,,val,sda-all,samples/GSE282123/GSM9282954,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9282955,colon,disease,colitis,colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,454968,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",GSE282123,GSE282123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,,MONDO:0005292,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hColon_290g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49999447879858655,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM9282955,,,val,sda-all,samples/GSE282123/GSM9282955,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9282956,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,729135,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",GSE282123,GSE282123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,,MONDO:0005101,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_480g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.4999884287454324,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM9282956,,,val,sda-all,samples/GSE282123/GSM9282956,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9282957,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,744823,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Xenium]",GSE282123,GSE282123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,,MONDO:0005101,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_480g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.5000016346279587,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42262875,,GSM9282957,,,val,sda-all,samples/GSE282123/GSM9282957,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8636485,colon,disease,ulcerative colitis,colon,primary tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,124938,"Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks [Merscope]",GSE282124,GSE282124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,FFPE mucosal biopsies,MONDO:0005101,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Merscope,,,cell,315,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,42262875,,GSM8636485,,,train,sda-all,samples/GSE282124/GSM8636485,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.44, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8637961,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3499,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.260528444724705,platform_constant,7.260528444724705,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637961,,,train,hesrt,samples/GSE282203/GSM8637961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637962,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3697,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.6800004915200075,platform_constant,7.6800004915200075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637962,,,train,hesrt,samples/GSE282203/GSM8637962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637963,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3584,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.209523936198103,platform_constant,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637963,,,train,hesrt,samples/GSE282203/GSM8637963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637964,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3646,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.2605284447247005,platform_constant,7.2605284447247005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637964,,,train,hesrt,samples/GSE282203/GSM8637964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637965,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3552,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.209523936198103,platform_constant,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637965,,,train,hesrt,samples/GSE282203/GSM8637965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637966,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3546,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.954406997019029,platform_constant,6.954406997019029,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637966,,,train,hesrt,samples/GSE282203/GSM8637966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637967,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2980,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.209523936198103,platform_constant,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637967,,,train,hesrt,samples/GSE282203/GSM8637967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637968,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3556,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.260528444724705,platform_constant,7.260528444724705,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637968,,,train,hesrt,samples/GSE282203/GSM8637968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637969,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3540,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.209523936198103,platform_constant,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637969,,,train,hesrt,samples/GSE282203/GSM8637969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637970,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3256,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.520000133008026,platform_constant,6.520000133008026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637970,,,train,hesrt,samples/GSE282203/GSM8637970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637971,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3672,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.209523936198103,platform_constant,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637971,,,train,hesrt,samples/GSE282203/GSM8637971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637972,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3583,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.520000133008026,platform_constant,6.520000133008026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637972,,,train,hesrt,samples/GSE282203/GSM8637972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637973,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3613,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.209523936198103,platform_constant,6.209523936198103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637973,,,train,hesrt,samples/GSE282203/GSM8637973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637974,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3037,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.8631580347452585,platform_constant,6.8631580347452585,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637974,,,train,hesrt,samples/GSE282203/GSM8637974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637975,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3709,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.520000133008002,platform_constant,6.520000133008002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637975,,,train,hesrt,samples/GSE282203/GSM8637975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637976,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3440,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.680000491520041,platform_constant,7.680000491520041,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637976,,,train,hesrt,samples/GSE282203/GSM8637976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637977,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3559,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637977,,,train,hesrt,samples/GSE282203/GSM8637977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637978,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3580,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637978,,,train,hesrt,samples/GSE282203/GSM8637978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637979,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3559,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637979,,,train,hesrt,samples/GSE282203/GSM8637979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637980,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3672,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637980,,,train,hesrt,samples/GSE282203/GSM8637980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637981,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3579,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637981,,,train,hesrt,samples/GSE282203/GSM8637981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637982,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3583,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637982,,,train,hesrt,samples/GSE282203/GSM8637982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637983,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3590,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637983,,,train,hesrt,samples/GSE282203/GSM8637983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637984,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3713,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637984,,,train,hesrt,samples/GSE282203/GSM8637984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637985,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3247,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,18.64868975077581,platform_constant,18.64868975077581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637985,,,train,hesrt,samples/GSE282203/GSM8637985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637986,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3137,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637986,,,train,hesrt,samples/GSE282203/GSM8637986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637987,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3853,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,18.64868975077581,platform_constant,18.64868975077581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637987,,,train,hesrt,samples/GSE282203/GSM8637987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637988,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3678,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637988,,,train,hesrt,samples/GSE282203/GSM8637988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637989,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3889,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.1047152747337,platform_constant,19.1047152747337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637989,,,train,hesrt,samples/GSE282203/GSM8637989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637990,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3457,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637990,,,train,hesrt,samples/GSE282203/GSM8637990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637991,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3753,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,18.64868975077581,platform_constant,18.64868975077581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637991,,,train,hesrt,samples/GSE282203/GSM8637991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637992,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3418,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,APP23,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637992,,,train,hesrt,samples/GSE282203/GSM8637992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637993,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3768,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.95440699701907,platform_constant,6.95440699701907,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637993,,,train,hesrt,samples/GSE282203/GSM8637993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637994,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4045,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.520000133008002,platform_constant,6.520000133008002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637994,,,train,hesrt,samples/GSE282203/GSM8637994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8637995,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3338,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.520000133008002,platform_constant,6.520000133008002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637995,,,train,hesrt,samples/GSE282203/GSM8637995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637996,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4221,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.680000491520024,platform_constant,7.680000491520024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637996,,,train,hesrt,samples/GSE282203/GSM8637996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8637997,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3344,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.260528444724758,platform_constant,7.260528444724758,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637997,,,train,hesrt,samples/GSE282203/GSM8637997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637998,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3740,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.520000133008002,platform_constant,6.520000133008002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637998,,,train,hesrt,samples/GSE282203/GSM8637998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8637999,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3431,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.6800004915200075,platform_constant,7.6800004915200075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8637999,,,train,hesrt,samples/GSE282203/GSM8637999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638000,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3403,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.260528444724758,platform_constant,7.260528444724758,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638000,,,train,hesrt,samples/GSE282203/GSM8638000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638001,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3735,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.520000133008002,platform_constant,6.520000133008002,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638001,,,train,hesrt,samples/GSE282203/GSM8638001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638002,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3516,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.536842346442062,platform_constant,7.536842346442062,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638002,,,train,hesrt,samples/GSE282203/GSM8638002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638003,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3249,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.160000229119984,platform_constant,7.160000229119984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638003,,,train,hesrt,samples/GSE282203/GSM8638003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638004,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3805,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.260528444724758,platform_constant,7.260528444724758,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638004,,,train,hesrt,samples/GSE282203/GSM8638004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638005,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3533,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.151066975199488,platform_constant,7.151066975199488,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638005,,,train,hesrt,samples/GSE282203/GSM8638005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638006,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3473,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,6.954406997019084,platform_constant,6.954406997019084,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638006,,,train,hesrt,samples/GSE282203/GSM8638006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638007,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3434,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.160000229119984,platform_constant,7.160000229119984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638007,,,train,hesrt,samples/GSE282203/GSM8638007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638008,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3417,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,14 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,7.260528444724758,platform_constant,7.260528444724758,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638008,,,train,hesrt,samples/GSE282203/GSM8638008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638009,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3547,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638009,,,train,hesrt,samples/GSE282203/GSM8638009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638010,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2994,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638010,,,train,hesrt,samples/GSE282203/GSM8638010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638011,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3571,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638011,,,train,hesrt,samples/GSE282203/GSM8638011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638012,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4439,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.10471527473341,platform_constant,19.10471527473341,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638012,,,train,hesrt,samples/GSE282203/GSM8638012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638013,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3790,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638013,,,train,hesrt,samples/GSE282203/GSM8638013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638014,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3839,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228800147,platform_constant,19.200001228800147,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638014,,,train,hesrt,samples/GSE282203/GSM8638014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638015,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3774,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638015,,,train,hesrt,samples/GSE282203/GSM8638015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638016,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3678,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638016,,,train,hesrt,samples/GSE282203/GSM8638016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638017,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3371,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,18.64868975077581,platform_constant,18.64868975077581,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638017,,,train,hesrt,samples/GSE282203/GSM8638017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638018,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,4089,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638018,,,train,hesrt,samples/GSE282203/GSM8638018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638019,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3860,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638019,,,train,hesrt,samples/GSE282203/GSM8638019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8638020,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3119,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638020,,,train,hesrt,samples/GSE282203/GSM8638020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638021,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3232,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638021,,,train,hesrt,samples/GSE282203/GSM8638021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638022,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3237,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.10471527473341,platform_constant,19.10471527473341,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638022,,,train,hesrt,samples/GSE282203/GSM8638022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638023,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3725,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638023,,,train,hesrt,samples/GSE282203/GSM8638023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638024,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3657,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638024,,,train,hesrt,samples/GSE282203/GSM8638024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8638025,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3775,Spatial transcriptomics identifies regional disruptions in brain rhythmic gene expression in a mouse model of Alzheimer’s disease,GSE282203,GSE282203,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,WT,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32286,counts,pixel,19.200001228799938,platform_constant,19.200001228799938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41659563,,GSM8638025,,,train,hesrt,samples/GSE282203/GSM8638025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641003,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3150,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.988683011081388,platform_constant,3.988683011081388,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641003,,,train,hesrt,samples/GSE282302/GSM8641003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641004,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3826,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.020328180773349,platform_constant,4.020328180773349,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641004,,,train,hesrt,samples/GSE282302/GSM8641004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641005,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3536,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.116695863365288,platform_constant,4.116695863365288,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641005,,,train,hesrt,samples/GSE282302/GSM8641005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8641006,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3664,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.05640377866306,platform_constant,4.05640377866306,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641006,,,train,hesrt,samples/GSE282302/GSM8641006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641007,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4440,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9676706393586105,platform_constant,3.9676706393586105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641007,,,train,hesrt,samples/GSE282302/GSM8641007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641008,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3706,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.988683011081379,platform_constant,3.988683011081379,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641008,,,train,hesrt,samples/GSE282302/GSM8641008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641009,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4105,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.025898047555061,platform_constant,4.025898047555061,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641009,,,train,hesrt,samples/GSE282302/GSM8641009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641010,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4647,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.057669575962961,platform_constant,4.057669575962961,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641010,,,train,hesrt,samples/GSE282302/GSM8641010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641011,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3824,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.999189169151017,platform_constant,3.999189169151017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641011,,,train,hesrt,samples/GSE282302/GSM8641011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8641012,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4261,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.978215142121785,platform_constant,3.978215142121785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641012,,,train,hesrt,samples/GSE282302/GSM8641012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641013,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3343,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9886830110813514,platform_constant,3.9886830110813514,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641013,,,train,hesrt,samples/GSE282302/GSM8641013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641014,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1861,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9993546036853544,platform_constant,3.9993546036853544,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641014,,,train,hesrt,samples/GSE282302/GSM8641014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641015,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2302,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.0203668311475305,platform_constant,4.0203668311475305,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641015,,,train,hesrt,samples/GSE282302/GSM8641015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641016,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2141,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9360634796841993,platform_constant,3.9360634796841993,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641016,,,train,hesrt,samples/GSE282302/GSM8641016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641017,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2979,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.035429926823896,platform_constant,4.035429926823896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641017,,,train,hesrt,samples/GSE282302/GSM8641017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641018,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3119,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.98872135722725,platform_constant,3.98872135722725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641018,,,train,hesrt,samples/GSE282302/GSM8641018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641019,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3249,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.999227616300329,platform_constant,3.999227616300329,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641019,,,train,hesrt,samples/GSE282302/GSM8641019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641020,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3923,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.066909991022587,platform_constant,4.066909991022587,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641020,,,train,hesrt,samples/GSE282302/GSM8641020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641021,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3743,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.009860754768263,platform_constant,4.009860754768263,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641021,,,train,hesrt,samples/GSE282302/GSM8641021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641022,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3689,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.978215142121785,platform_constant,3.978215142121785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641022,,,train,hesrt,samples/GSE282302/GSM8641022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641023,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3671,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.057708585327462,platform_constant,4.057708585327462,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641023,,,train,hesrt,samples/GSE282302/GSM8641023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641024,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3477,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9939997523883704,platform_constant,3.9939997523883704,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641024,,,train,hesrt,samples/GSE282302/GSM8641024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641025,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2387,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.086816343251943,platform_constant,4.086816343251943,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641025,,,train,hesrt,samples/GSE282302/GSM8641025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641026,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3901,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.186310399854576,platform_constant,4.186310399854576,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641026,,,train,hesrt,samples/GSE282302/GSM8641026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641027,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3760,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.002726878226908,platform_constant,4.002726878226908,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641027,,,train,hesrt,samples/GSE282302/GSM8641027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641028,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4086,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.1115638092837195,platform_constant,4.1115638092837195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641028,,,train,hesrt,samples/GSE282302/GSM8641028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641029,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4305,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9451518927521656,platform_constant,3.9451518927521656,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641029,,,train,hesrt,samples/GSE282302/GSM8641029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641030,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2572,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.1072707953331165,platform_constant,4.1072707953331165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641030,,,train,hesrt,samples/GSE282302/GSM8641030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8641031,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1854,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.1389413274549645,platform_constant,4.1389413274549645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641031,,,train,hesrt,samples/GSE282302/GSM8641031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641032,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3379,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.3635807396797155,platform_constant,4.3635807396797155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641032,,,train,hesrt,samples/GSE282302/GSM8641032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641033,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3100,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.120402033426829,platform_constant,4.120402033426829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641033,,,train,hesrt,samples/GSE282302/GSM8641033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641034,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2516,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.29892609639909,platform_constant,4.29892609639909,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641034,,,train,hesrt,samples/GSE282302/GSM8641034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641035,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2508,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.091866822735055,platform_constant,4.091866822735055,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641035,,,train,hesrt,samples/GSE282302/GSM8641035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8641036,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2255,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.16206802830189,platform_constant,4.16206802830189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641036,,,train,hesrt,samples/GSE282302/GSM8641036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641037,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2243,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.98858545794071,platform_constant,3.98858545794071,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641037,,,train,hesrt,samples/GSE282302/GSM8641037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641040,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3064,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.076968251989538,platform_constant,4.076968251989538,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641040,,,train,hesrt,samples/GSE282302/GSM8641040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641041,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3345,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.086816343251924,platform_constant,4.086816343251924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641041,,,train,hesrt,samples/GSE282302/GSM8641041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641042,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3899,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.086816343251943,platform_constant,4.086816343251943,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641042,,,train,hesrt,samples/GSE282302/GSM8641042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641044,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3419,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.534659850912342,platform_constant,4.534659850912342,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641044,,,train,hesrt,samples/GSE282302/GSM8641044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641045,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3623,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.009544772666975,platform_constant,4.009544772666975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641045,,,train,hesrt,samples/GSE282302/GSM8641045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641046,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3733,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.991110508714546,platform_constant,3.991110508714546,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641046,,,train,hesrt,samples/GSE282302/GSM8641046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8641047,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4210,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.979747326692424,platform_constant,3.979747326692424,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641047,,,train,hesrt,samples/GSE282302/GSM8641047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641048,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4154,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.421660603335733,platform_constant,4.421660603335733,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641048,,,train,hesrt,samples/GSE282302/GSM8641048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641049,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2534,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.177724584352066,platform_constant,4.177724584352066,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641049,,,train,hesrt,samples/GSE282302/GSM8641049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641050,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2487,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.936313232896295,platform_constant,3.936313232896295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641050,,,train,hesrt,samples/GSE282302/GSM8641050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641051,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2776,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.0335342246289025,platform_constant,4.0335342246289025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641051,,,train,hesrt,samples/GSE282302/GSM8641051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641052,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2694,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.998181293867032,platform_constant,3.998181293867032,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641052,,,train,hesrt,samples/GSE282302/GSM8641052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641053,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2364,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.979494577842634,platform_constant,3.979494577842634,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641053,,,train,hesrt,samples/GSE282302/GSM8641053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8641054,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2395,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.962323271167784,platform_constant,3.962323271167784,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641054,,,train,hesrt,samples/GSE282302/GSM8641054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641055,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2303,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.137878894925712,platform_constant,4.137878894925712,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641055,,,train,hesrt,samples/GSE282302/GSM8641055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8641056,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2247,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.148767234101986,platform_constant,4.148767234101986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641056,,,train,hesrt,samples/GSE282302/GSM8641056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8641057,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2346,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.0385845800964395,platform_constant,4.0385845800964395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641057,,,train,hesrt,samples/GSE282302/GSM8641057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641058,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2375,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9249501835961054,platform_constant,3.9249501835961054,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641058,,,train,hesrt,samples/GSE282302/GSM8641058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641059,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4257,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9621390268453593,platform_constant,3.9621390268453593,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641059,,,train,hesrt,samples/GSE282302/GSM8641059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641060,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3564,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9263886251730096,platform_constant,3.9263886251730096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641060,,,train,hesrt,samples/GSE282302/GSM8641060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8641061,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3228,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9363162351840923,platform_constant,3.9363162351840923,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641061,,,train,hesrt,samples/GSE282302/GSM8641061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8641062,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3568,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9878350725232745,platform_constant,3.9878350725232745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641062,,,train,hesrt,samples/GSE282302/GSM8641062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641063,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4431,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9935315978398167,platform_constant,3.9935315978398167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641063,,,train,hesrt,samples/GSE282302/GSM8641063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM8641064,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4300,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9621390268453602,platform_constant,3.9621390268453602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641064,,,train,hesrt,samples/GSE282302/GSM8641064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM8641065,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4270,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.983151964424773,platform_constant,3.983151964424773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641065,,,train,hesrt,samples/GSE282302/GSM8641065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641066,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3775,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9830251265614285,platform_constant,3.9830251265614285,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641066,,,train,hesrt,samples/GSE282302/GSM8641066,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641067,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3337,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.951632793775664,platform_constant,3.951632793775664,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641067,,,train,hesrt,samples/GSE282302/GSM8641067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641068,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4145,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.143784132125744,platform_constant,4.143784132125744,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641068,,,train,hesrt,samples/GSE282302/GSM8641068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641069,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3240,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.993658223745644,platform_constant,3.993658223745644,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641069,,,train,hesrt,samples/GSE282302/GSM8641069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641070,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3295,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.068467810807136,platform_constant,4.068467810807136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641070,,,train,hesrt,samples/GSE282302/GSM8641070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641071,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3498,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.014544272414712,platform_constant,4.014544272414712,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641071,,,train,hesrt,samples/GSE282302/GSM8641071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641072,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2590,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.043910920763264,platform_constant,4.043910920763264,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641072,,,train,hesrt,samples/GSE282302/GSM8641072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641073,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3477,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.993658223745626,platform_constant,3.993658223745626,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641073,,,train,hesrt,samples/GSE282302/GSM8641073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641074,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2691,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.159733603386881,platform_constant,4.159733603386881,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641074,,,train,hesrt,samples/GSE282302/GSM8641074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8641075,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2783,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.004164574345208,platform_constant,4.004164574345208,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641075,,,train,hesrt,samples/GSE282302/GSM8641075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641076,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2470,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.004177406129048,platform_constant,4.004177406129048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641076,,,train,hesrt,samples/GSE282302/GSM8641076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641077,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2559,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.014557137461431,platform_constant,4.014557137461431,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641077,,,train,hesrt,samples/GSE282302/GSM8641077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8641078,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2684,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.993544395549137,platform_constant,3.993544395549137,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641078,,,train,hesrt,samples/GSE282302/GSM8641078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641079,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3089,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.061467020805752,platform_constant,4.061467020805752,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641079,,,train,hesrt,samples/GSE282302/GSM8641079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641080,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2672,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.061467020805734,platform_constant,4.061467020805734,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641080,,,train,hesrt,samples/GSE282302/GSM8641080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641081,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3089,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.116656286918105,platform_constant,4.116656286918105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641081,,,train,hesrt,samples/GSE282302/GSM8641081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8641082,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3364,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.024758781142124,platform_constant,4.024758781142124,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641082,,,train,hesrt,samples/GSE282302/GSM8641082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641083,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3340,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.097708435801431,platform_constant,4.097708435801431,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641083,,,train,hesrt,samples/GSE282302/GSM8641083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641084,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3177,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9813795988779765,platform_constant,3.9813795988779765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641084,,,train,hesrt,samples/GSE282302/GSM8641084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641085,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3862,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.04593635481292,platform_constant,4.04593635481292,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641085,,,train,hesrt,samples/GSE282302/GSM8641085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641086,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1940,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.020113763774046,platform_constant,4.020113763774046,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641086,,,train,hesrt,samples/GSE282302/GSM8641086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641087,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2927,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9935315978398074,platform_constant,3.9935315978398074,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641087,,,train,hesrt,samples/GSE282302/GSM8641087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641088,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4060,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.014544272414712,platform_constant,4.014544272414712,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641088,,,train,hesrt,samples/GSE282302/GSM8641088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.99}",,
GSM8641089,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2364,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.035429926823896,platform_constant,4.035429926823896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641089,,,train,hesrt,samples/GSE282302/GSM8641089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641090,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3894,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.00441936691234,platform_constant,4.00441936691234,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641090,,,train,hesrt,samples/GSE282302/GSM8641090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8641091,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3577,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.061506066677896,platform_constant,4.061506066677896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641091,,,train,hesrt,samples/GSE282302/GSM8641091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8641092,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3040,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.061506066677896,platform_constant,4.061506066677896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641092,,,train,hesrt,samples/GSE282302/GSM8641092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8641093,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3091,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.043277984841253,platform_constant,4.043277984841253,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641093,,,train,hesrt,samples/GSE282302/GSM8641093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641094,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3347,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.079986827282776,platform_constant,4.079986827282776,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641094,,,train,hesrt,samples/GSE282302/GSM8641094,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641095,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3509,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.095429830501896,platform_constant,4.095429830501896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641095,,,train,hesrt,samples/GSE282302/GSM8641095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641096,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4216,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.063762678319425,platform_constant,4.063762678319425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641096,,,train,hesrt,samples/GSE282302/GSM8641096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641097,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3336,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.063277984338962,platform_constant,4.063277984338962,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641097,,,train,hesrt,samples/GSE282302/GSM8641097,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8641098,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2649,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.106439329901525,platform_constant,4.106439329901525,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641098,,,train,hesrt,samples/GSE282302/GSM8641098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641099,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2760,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9993546036853727,platform_constant,3.9993546036853727,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641099,,,train,hesrt,samples/GSE282302/GSM8641099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641100,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3147,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.05201226698438,platform_constant,4.05201226698438,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641100,,,train,hesrt,samples/GSE282302/GSM8641100,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641101,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3651,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.0203668311475305,platform_constant,4.0203668311475305,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641101,,,train,hesrt,samples/GSE282302/GSM8641101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8641102,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4152,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,3.9350881976691365,platform_constant,3.9350881976691365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641102,,,train,hesrt,samples/GSE282302/GSM8641102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8641103,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3840,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.090856921359118,platform_constant,4.090856921359118,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641103,,,train,hesrt,samples/GSE282302/GSM8641103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641104,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4561,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.060049271516082,platform_constant,4.060049271516082,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641104,,,train,hesrt,samples/GSE282302/GSM8641104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8641105,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4399,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.136816112781218,platform_constant,4.136816112781218,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641105,,,train,hesrt,samples/GSE282302/GSM8641105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641106,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3094,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.144644158690165,platform_constant,4.144644158690165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641106,,,train,hesrt,samples/GSE282302/GSM8641106,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641107,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3571,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.330247698226404,platform_constant,4.330247698226404,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641107,,,train,hesrt,samples/GSE282302/GSM8641107,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8641108,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3996,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.293884765081034,platform_constant,4.293884765081034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641108,,,train,hesrt,samples/GSE282302/GSM8641108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8641109,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3156,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.100452681821582,platform_constant,4.100452681821582,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641109,,,train,hesrt,samples/GSE282302/GSM8641109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8641110,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3064,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Spatial Transcriptomics],GSE282302,GSE282302+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,"post-neoadjuvant, resected PDAC tumor",MONDO:0005184,luna,pancreatic ductal adenocarcinoma,neoadjuvant FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium for FFPE,,,spot,19144,counts,pixel,4.477302668532266,platform_constant,4.477302668532266,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41533516,,GSM8641110,,,train,hesrt,samples/GSE282302/GSM8641110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8645793,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),741,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.14967109386816,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645793,,,train,sda-all,samples/GSE282547/GSM8645793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645794,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),621,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.141410479219055,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645794,,,train,sda-all,samples/GSE282547/GSM8645794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.6000000000000001}",,
GSM8645795,heart,normal,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E-like (heuristic),1293,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.154472187548012,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645795,,,train,sda-all,samples/GSE282547/GSM8645795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645796,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),664,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.146948530848197,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645796,,,train,sda-all,samples/GSE282547/GSM8645796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM8645797,heart,normal,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E-like (heuristic),708,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.455648664924703,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645797,,,train,sda-all,samples/GSE282547/GSM8645797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM8645798,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E-like (heuristic),849,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.44718107508083,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645798,,,train,sda-all,samples/GSE282547/GSM8645798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8645799,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,other bright-field stain (heuristic),456,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.45234912221202,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645799,,,train,sda-all,samples/GSE282547/GSM8645799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8645800,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,undetermined,243,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.447167146742192,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42141139,,GSM8645800,,,train,sda-all,samples/GSE282547/GSM8645800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645801,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,5563,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,23422,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42141139,,GSM8645801,,,train,sda-all,samples/GSE282547/GSM8645801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645802,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,2498,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,20863,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42141139,,GSM8645802,,,train,sda-all,samples/GSE282547/GSM8645802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8645803,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,7538,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,24860,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42141139,,GSM8645803,,,train,sda-all,samples/GSE282547/GSM8645803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645804,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,9444,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,25493,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42141139,,GSM8645804,,,train,sda-all,samples/GSE282547/GSM8645804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645805,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,5524,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,24848,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42141139,,GSM8645805,,,train,sda-all,samples/GSE282547/GSM8645805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8645806,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,19780,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,tamoxifen,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,29755,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42141139,,GSM8645806,,,train,sda-all,samples/GSE282547/GSM8645806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8645807,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,21639,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,tamoxifen,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,30069,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42141139,,GSM8645807,,,train,sda-all,samples/GSE282547/GSM8645807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9065771,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,21975,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,22731,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42141139,,GSM9065771,,,train,sda-all,samples/GSE282547/GSM9065771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9065772,heart,normal,,heart,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,18028,Spatial transcriptomic analysis of developing hearts at embryonic and neonatal stages,GSE282547,GSE282547,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart,,luna,,CD1 wildtype,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,21471,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42141139,,GSM9065772,,,train,sda-all,samples/GSE282547/GSM9065772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647873,heart,disease,cardiomyopathy,heart,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,400,Atf3 controls transitioning in female mitochondrial cardiomyopathy as identified by single-cell transcriptomics [Spatial Transcriptomics],GSE282635,GSE242821+GSE282635,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0004994,luna,mitochondrial cardiomyopathy,mitochondrial cardiomyopathy,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.7634184595142433,platform_constant,2.7634184595142433,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40184463,,GSM8647873,,,train,hesrt,samples/GSE282635/GSM8647873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8647884,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1620,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647884,,,train,sda-all,samples/GSE282639/GSM8647884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647885,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4605,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647885,,,train,sda-all,samples/GSE282639/GSM8647885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647886,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1933,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647886,,,train,sda-all,samples/GSE282639/GSM8647886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647887,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2437,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647887,,,train,sda-all,samples/GSE282639/GSM8647887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647888,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3542,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647888,,,train,sda-all,samples/GSE282639/GSM8647888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647889,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1254,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647889,,,train,sda-all,samples/GSE282639/GSM8647889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8647890,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2365,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647890,,,train,sda-all,samples/GSE282639/GSM8647890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647891,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2879,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647891,,,train,sda-all,samples/GSE282639/GSM8647891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647892,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3559,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647892,,,train,sda-all,samples/GSE282639/GSM8647892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647893,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4045,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647893,,,train,sda-all,samples/GSE282639/GSM8647893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647894,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2753,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647894,,,train,sda-all,samples/GSE282639/GSM8647894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647895,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2958,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647895,,,train,sda-all,samples/GSE282639/GSM8647895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647896,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1320,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647896,,,train,sda-all,samples/GSE282639/GSM8647896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8647897,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2785,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647897,,,train,sda-all,samples/GSE282639/GSM8647897,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647898,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3973,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647898,,,train,sda-all,samples/GSE282639/GSM8647898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647899,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2682,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647899,,,train,sda-all,samples/GSE282639/GSM8647899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647900,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2862,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647900,,,train,sda-all,samples/GSE282639/GSM8647900,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8647901,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3757,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647901,,,train,sda-all,samples/GSE282639/GSM8647901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647902,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2015,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647902,,,train,sda-all,samples/GSE282639/GSM8647902,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647903,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4093,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647903,,,train,sda-all,samples/GSE282639/GSM8647903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8647904,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3299,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647904,,,train,sda-all,samples/GSE282639/GSM8647904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647905,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1140,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647905,,,train,sda-all,samples/GSE282639/GSM8647905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647906,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1561,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647906,,,train,sda-all,samples/GSE282639/GSM8647906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647907,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1660,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647907,,,train,sda-all,samples/GSE282639/GSM8647907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647908,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2583,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647908,,,train,sda-all,samples/GSE282639/GSM8647908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647909,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3562,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647909,,,train,sda-all,samples/GSE282639/GSM8647909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8647910,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1752,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647910,,,train,sda-all,samples/GSE282639/GSM8647910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647911,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2523,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647911,,,train,sda-all,samples/GSE282639/GSM8647911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647912,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2321,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647912,,,train,sda-all,samples/GSE282639/GSM8647912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647913,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3151,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647913,,,train,sda-all,samples/GSE282639/GSM8647913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647914,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2979,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647914,,,train,sda-all,samples/GSE282639/GSM8647914,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647915,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4140,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647915,,,train,sda-all,samples/GSE282639/GSM8647915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647916,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3919,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647916,,,train,sda-all,samples/GSE282639/GSM8647916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647917,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2632,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647917,,,train,sda-all,samples/GSE282639/GSM8647917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647918,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2848,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647918,,,train,sda-all,samples/GSE282639/GSM8647918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647919,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1174,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,MONDO:0800504,luna,IPF,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647919,,,train,sda-all,samples/GSE282639/GSM8647919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647920,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1354,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647920,,,train,sda-all,samples/GSE282639/GSM8647920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647921,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2075,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647921,,,train,sda-all,samples/GSE282639/GSM8647921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647922,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2836,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647922,,,train,sda-all,samples/GSE282639/GSM8647922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647923,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3712,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647923,,,train,sda-all,samples/GSE282639/GSM8647923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8647924,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1302,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647924,,,train,sda-all,samples/GSE282639/GSM8647924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8647925,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2659,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647925,,,train,sda-all,samples/GSE282639/GSM8647925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8647926,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3004,Ectopic expression of MUC5B in the respiratory bronchiole initiates ER stress in the IPF lung,GSE282639,GSE282639,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung tissue FFPE,,luna,Control,GT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,985,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,41091081,,GSM8647926,,,train,sda-all,samples/GSE282639/GSM8647926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8649279,tonsil,normal,,tonsil,primary tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,952082,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,GSE282714,GSE282714,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002372,tonsil,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40112778,,GSM8649279,,,train,sda-all,samples/GSE282714/GSM8649279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.92, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8649280,tonsil,normal,,tonsil,primary tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,1099313,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,GSE282714,GSE282714,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002372,tonsil,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40112778,,GSM8649280,,,train,sda-all,samples/GSE282714/GSM8649280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8649281,tonsil,normal,,tonsil,primary tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,432868,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,GSE282714,GSE282714,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002372,tonsil,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40112778,,GSM8649281,,,train,sda-all,samples/GSE282714/GSM8649281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.6000000000000001, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8649282,tonsil,normal,,tonsil,primary tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,827160,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,GSE282714,GSE282714,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002372,tonsil,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,462,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40112778,,GSM8649282,,,train,sda-all,samples/GSE282714/GSM8649282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.77, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8649283,lymph node,normal,,lymph node,primary tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,817849,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,GSE282714,GSE282714,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,lymph node,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,180,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40112778,,GSM8649283,,,train,sda-all,samples/GSE282714/GSM8649283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8649284,lymph node,normal,,lymph node,primary tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,1255696,SPARROW reveals microenvironment zone-specific cell states in healthy and diseased tissues.,GSE282714,GSE282714,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,lymph node,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,180,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,40112778,,GSM8649284,,,train,sda-all,samples/GSE282714/GSM8649284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8649315,prostate,disease,prostate cancer,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,140337,FOXA1 loss drives basal/squamous de-differentiation of prostate cancer and induces an immunosuppressive tumor microenvironment,GSE282721,GSE282721,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002367,prostate cancer,MONDO:0008315,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,980,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41904157,,GSM8649315,,,train,sda-all,samples/GSE282721/GSM8649315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8649343,prostate,disease,prostate cancer,prostate gland,tumour tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,1754,FOXA1 loss drives basal/squamous de-differentiation of prostate cancer and induces an immunosuppressive tumor microenvironment,GSE282726,GSE282726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,MONDO:0008315,luna,,"PbCre4:Ptenf/f (P), Intact",luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.476851405589144,platform_constant,4.476851405589144,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904157,,GSM8649343,,,train,hesrt,samples/GSE282726/GSM8649343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8649344,prostate,disease,prostate cancer,prostate gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2965,FOXA1 loss drives basal/squamous de-differentiation of prostate cancer and induces an immunosuppressive tumor microenvironment,GSE282726,GSE282726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,MONDO:0008315,luna,,"PbCre4:Ptenf/fFoxa1f/f (PF), Intact",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.429215443195834,platform_constant,4.429215443195834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904157,,GSM8649344,,,train,hesrt,samples/GSE282726/GSM8649344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8649345,prostate,disease,prostate cancer,prostate gland,tumour tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E,3465,FOXA1 loss drives basal/squamous de-differentiation of prostate cancer and induces an immunosuppressive tumor microenvironment,GSE282726,GSE282726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,MONDO:0008315,luna,,"PbCre4:Ptenf/f (P), Intact",luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.390651542239305,platform_constant,4.390651542239305,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904157,,GSM8649345,,,train,hesrt,samples/GSE282726/GSM8649345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8649346,prostate,disease,prostate cancer,prostate gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3903,FOXA1 loss drives basal/squamous de-differentiation of prostate cancer and induces an immunosuppressive tumor microenvironment,GSE282726,GSE282726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,MONDO:0008315,luna,,"PbCre4:Ptenf/fFoxa1f/f (PF), Intact",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.429039344050271,platform_constant,4.429039344050271,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904157,,GSM8649346,,,train,hesrt,samples/GSE282726/GSM8649346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8651758,brain,perturbation,,prelimbic area,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,4586,Fronto-insular circuit mechanisms of accelerated intermittent theta burst stimulation,GSE282867,GSE282867,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; strain C57BL/6J in the GEO record,Mus,,luna,UBERON:8440032,Left prelimbic cortex,,luna,,iTBS & Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide_seq,,,cell,32286,counts,pixel,,unresolved,,,,,,near_duplicate_observations;shared_positions,VERIFIED,,,,42102818,,CG-75e604816e85,library_alias,GSM8651759,train,sda-all,samples/GSE282867/GSM8651758,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8651760,brain,perturbation,,prelimbic area,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,5027,Fronto-insular circuit mechanisms of accelerated intermittent theta burst stimulation,GSE282867,GSE282867,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; strain C57BL/6J in the GEO record,Mus,,luna,UBERON:8440032,Left prelimbic cortex,,luna,,iTBS & Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide_seq,,,cell,32286,counts,pixel,,unresolved,,,,,,near_duplicate_observations;shared_positions,VERIFIED,,,,42102818,,CG-6c9423d585b4,library_alias,GSM8651761,train,sda-all,samples/GSE282867/GSM8651760,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8651762,brain,perturbation,,prelimbic area,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,5621,Fronto-insular circuit mechanisms of accelerated intermittent theta burst stimulation,GSE282867,GSE282867,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; strain C57BL/6J in the GEO record,Mus,,luna,UBERON:8440032,Left prelimbic cortex,,luna,,iTBS & Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide_seq,,,cell,32286,counts,pixel,,unresolved,,,,,,near_duplicate_observations;shared_positions,VERIFIED,,,,42102818,,CG-719a8759cd58,library_alias,GSM8651763,train,sda-all,samples/GSE282867/GSM8651762,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8651764,brain,perturbation,,prelimbic area,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,5582,Fronto-insular circuit mechanisms of accelerated intermittent theta burst stimulation,GSE282867,GSE282867,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; strain C57BL/6J in the GEO record,Mus,,luna,UBERON:8440032,Left prelimbic cortex,,luna,,iTBS & Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide_seq,,,cell,32286,counts,pixel,,unresolved,,,,,,near_duplicate_observations;shared_positions,VERIFIED,,,,42102818,,CG-2bbe47327512,library_alias,GSM8651765,train,sda-all,samples/GSE282867/GSM8651764,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8651766,brain,perturbation,,prelimbic area,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,4072,Fronto-insular circuit mechanisms of accelerated intermittent theta burst stimulation,GSE282867,GSE282867,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; strain C57BL/6J in the GEO record,Mus,,luna,UBERON:8440032,Left prelimbic cortex,,luna,,iTBS & Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide_seq,,,cell,32286,counts,pixel,,unresolved,,,,,,near_duplicate_observations;shared_positions,VERIFIED,,,,42102818,,CG-bff85e71370f,library_alias,GSM8651767,train,sda-all,samples/GSE282867/GSM8651766,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM8653128,brain,disease,Alzheimer disease;amyloidosis,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,9630552,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease,GSE282928,GSE282928,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,MONDO:0004975;MONDO:0019065,luna,,lecanemab Immunized AD (LCMB),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40050704,,GSM8653128,,,train,sda-all,samples/GSE282928/GSM8653128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8653129,brain,disease,Alzheimer disease;amyloidosis,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,10290316,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease,GSE282928,GSE282928,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,MONDO:0004975;MONDO:0019065,luna,,Non-immunized AD (nAD3),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40050704,,GSM8653129,,,train,sda-all,samples/GSE282928/GSM8653129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8653130,brain,disease,Alzheimer disease;amyloidosis,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,10738844,Microglial mechanisms drive amyloid-β clearance in immunized patients with Alzheimer’s disease,GSE282928,GSE282928,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,MONDO:0004975;MONDO:0019065,luna,,Non-immunized AD (nAD4),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40050704,,GSM8653130,,,train,sda-all,samples/GSE282928/GSM8653130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8654772,skin,normal,,skin of abdomen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3048,Type I Interferon Induced Apoptosis Drives Chronic Wounds in ISG15 deficiency,GSE283022,GSE283022,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001416,Skin punch biopsy,,luna,,Healthy Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.983726499125532,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41743834,,GSM8654772,,,train,sda-all,samples/GSE283022/GSM8654772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8654773,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1066,Type I Interferon Induced Apoptosis Drives Chronic Wounds in ISG15 deficiency,GSE283022,GSE283022,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,,luna,,Patient 1: Skin Lesion 1 (ISG15 Deficiency),luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.982300488843396,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,stain too faint / in_tissue drawn by hand,,41743834,,GSM8654773,,,train,sda-all,samples/GSE283022/GSM8654773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8654774,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),589,Type I Interferon Induced Apoptosis Drives Chronic Wounds in ISG15 deficiency,GSE283022,GSE283022,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,,luna,,Patient 1: Skin Lesion 2 (ISG15 Deficiency),luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.885455551409343,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41743834,,GSM8654774,,,train,sda-all,samples/GSE283022/GSM8654774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM8654775,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2615,Type I Interferon Induced Apoptosis Drives Chronic Wounds in ISG15 deficiency,GSE283022,GSE283022,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin punch biopsy,,luna,,Patient 1: Skin Lesion 3 (ISG15 Deficiency),luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.8865053825917,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41743834,,GSM8654775,,,train,sda-all,samples/GSE283022/GSM8654775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8655157,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2771,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.235294144752938,platform_constant,4.235294144752938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655157,,,train,hesrt,samples/GSE283052/GSM8655157,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8655158,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2230,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.719444192190134,platform_constant,4.719444192190134,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655158,,,train,hesrt,samples/GSE283052/GSM8655158,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8655159,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,947,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.367769607517362,platform_constant,4.367769607517362,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655159,,,train,hesrt,samples/GSE283052/GSM8655159,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8655160,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2194,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.373147998061695,platform_constant,4.373147998061695,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655160,,,train,hesrt,samples/GSE283052/GSM8655160,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8655161,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2315,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.129629751866685,platform_constant,4.129629751866685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655161,,,train,hesrt,samples/GSE283052/GSM8655161,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8655162,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2465,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.168292831767897,platform_constant,4.168292831767897,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655162,,,train,hesrt,samples/GSE283052/GSM8655162,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8655163,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2670,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.245624940267532,platform_constant,4.245624940267532,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655163,,,train,hesrt,samples/GSE283052/GSM8655163,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8655164,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1809,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.268714949828857,platform_constant,4.268714949828857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655164,,,train,hesrt,samples/GSE283052/GSM8655164,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8655165,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2715,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.235294144752938,platform_constant,4.235294144752938,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655165,,,train,hesrt,samples/GSE283052/GSM8655165,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8655166,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2224,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.364705865767049,platform_constant,4.364705865767049,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655166,,,train,hesrt,samples/GSE283052/GSM8655166,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8655167,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1691,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.133333276458693,platform_constant,4.133333276458693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655167,,,train,hesrt,samples/GSE283052/GSM8655167,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8655168,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2735,Spatial transcriptomics of 12 tumor tissues from colorectal cancer,GSE283052,GSE283052,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,CRC,MONDO:0024331,luna,colorectal cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.599074071360612,platform_constant,4.599074071360612,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41537001,,GSM8655168,,,train,hesrt,samples/GSE283052/GSM8655168,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8656735,skin,disease,T-cell non-Hodgkin lymphoma,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1702,Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy [Spatial Transcriptomics],GSE283145,GSE283145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,FFPE skin sample of left dorsal region,MONDO:0015760,mondo_predicate (Luna: perturbation),T-cell lymphoma,CAR T cell (cilta-cel),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36946,counts,pixel,0.7349663619190216,platform_constant,0.7349663619190216,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8656735,,,train,hesrt,samples/GSE283145/GSM8656735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.28, ""uberon"": 0.76, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8656736,skin,disease,T-cell non-Hodgkin lymphoma,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1921,Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy [Spatial Transcriptomics],GSE283145,GSE283145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,FFPE skin sample of left dorsal region,MONDO:0015760,luna,T-cell lymphoma,CAR T cell (cilta-cel),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36946,counts,pixel,0.7345751924604554,platform_constant,0.7345751924604554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8656736,,,train,hesrt,samples/GSE283145/GSM8656736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.56, ""uberon"": 0.79, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8656737,bone,disease,non-Hodgkin lymphoma,bony vertebral centrum,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,793,Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy [Spatial Transcriptomics],GSE283145,GSE283145,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001075,extramedullary disease (lumbar vertebral body),MONDO:0018908,luna,T-cell lymphoma,no CAR T cell,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36946,counts,pixel,0.7346349264656855,platform_constant,0.7346349264656855,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8656737,,,train,hesrt,samples/GSE283145/GSM8656737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8656982,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seqV2,False,,23123,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,39951,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM8656982,,,train,sda-all,samples/GSE283159/GSM8656982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8656983,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seqV2,False,,102092,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,33876,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM8656983,,,train,sda-all,samples/GSE283159/GSM8656983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8656984,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seqV2,False,,30881,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,36836,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM8656984,,,train,sda-all,samples/GSE283159/GSM8656984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8656985,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seqV2,False,,324057,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Edu injection,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,37631,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM8656985,,,train,sda-all,samples/GSE283159/GSM8656985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8656986,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Slide-seq,Slide-seqV2,False,,369122,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Edu injection,luna,neonatal or infant,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,39044,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM8656986,,,train,sda-all,samples/GSE283159/GSM8656986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM8656987,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seqV2,False,,341021,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Edu injection,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,37141,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM8656987,,,train,sda-all,samples/GSE283159/GSM8656987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM8656988,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seqV2,False,,329515,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Edu injection,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,36399,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM8656988,,,train,sda-all,samples/GSE283159/GSM8656988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8831477,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seqV2,False,,329793,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Edu injection,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seqV2,,,bead,37067,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM8831477,,,train,sda-all,samples/GSE283159/GSM8831477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9421073,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,267066,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Embryo,,luna,,Edu injection,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,slide_seq,,,bead,40434,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM9421073,,,train,sda-all,samples/GSE283159/GSM9421073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9421074,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,265724,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Embryo,,luna,,Edu injection,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,slide_seq,,,bead,39007,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM9421074,,,train,sda-all,samples/GSE283159/GSM9421074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9421075,embryo (whole),perturbation,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,266310,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Embryo,,luna,,Edu injection,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,slide_seq,,,bead,38227,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM9421075,,,train,sda-all,samples/GSE283159/GSM9421075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9421076,kidney,disease,neoplasm,kidney,tumour tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,259438,SPTEdU-seq: Parallel optics-free newborn cell tracking and spatial total transcriptomics decipher spatiotemporal dynamics across tissues and species,GSE283159,GSE283159,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0005070,luna,,Edu injection,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,slide_seq,,,bead,37024,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41895283,,GSM9421076,,,train,sda-all,samples/GSE283159/GSM9421076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.58, ""disease_status"": 0.59, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8658290,bladder,disease,prostate adenocarcinoma,urinary bladder,metastasis,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,363429,CDK12/13 inactivation triggers STING-mediated antitumor immunity in preclinical models,GSE283227,GSE283227,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0005082,luna,metastatic prostate adenocarcinoma,CDK12 mutated,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.2266338952992892,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40955658,,GSM8658290,,,train,sda-all,samples/GSE283227/GSM8658290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8658291,lymph node,disease,prostate adenocarcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,79789,CDK12/13 inactivation triggers STING-mediated antitumor immunity in preclinical models,GSE283227,GSE283227,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Lymph node,MONDO:0005082,luna,metastatic prostate adenocarcinoma,CDK12 mutated,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.548035176839189,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40955658,,GSM8658291,,,train,sda-all,samples/GSE283227/GSM8658291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8658292,lymph node,disease,prostate adenocarcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,167254,CDK12/13 inactivation triggers STING-mediated antitumor immunity in preclinical models,GSE283227,GSE283227,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Lymph node,MONDO:0005082,luna,metastatic prostate adenocarcinoma,CDK12 WT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.5242717233250325,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40955658,,GSM8658292,,,train,sda-all,samples/GSE283227/GSM8658292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8658293,lymph node,disease,prostate adenocarcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,162379,CDK12/13 inactivation triggers STING-mediated antitumor immunity in preclinical models,GSE283227,GSE283227,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Lymph node,MONDO:0005082,luna,metastatic prostate adenocarcinoma,CDK12 WT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.602510751802372,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,40955658,,GSM8658293,,,train,sda-all,samples/GSE283227/GSM8658293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8658911,blood vessel,normal,,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,799,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,GSE283269,GSE283269,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,DIT Coronary Artery,,luna,,from autopsies,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.39891337385556,platform_constant,2.39891337385556,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658911,,,test,hesrt,samples/GSE283269/GSM8658911,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8658912,blood vessel,normal,,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,732,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,GSE283269,GSE283269,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,DIT Coronary Artery,,luna,,from autopsies,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.714129403092834,platform_constant,2.714129403092834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658912,,,test,hesrt,samples/GSE283269/GSM8658912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8658913,blood vessel,disease,,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1741,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,GSE283269,GSE283269,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,DIT Coronary Artery,,luna,,from autopsies,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.047169045553469,platform_constant,3.047169045553469,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658913,,,test,hesrt,samples/GSE283269/GSM8658913,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8658914,blood vessel,disease,,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,999,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,GSE283269,GSE283269,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,DIT Coronary Artery,,luna,,from freshly explanted hearts,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.694625564434662,platform_constant,2.694625564434662,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658914,,,test,hesrt,samples/GSE283269/GSM8658914,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8658915,blood vessel,normal,,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1359,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,GSE283269,GSE283269,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,DIT Coronary Artery,,luna,,from freshly explanted hearts,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.1711050793623765,platform_constant,3.1711050793623765,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658915,,,test,hesrt,samples/GSE283269/GSM8658915,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8658916,blood vessel,normal,,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,952,Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts,GSE283269,GSE283269,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,DIT Coronary Artery,,luna,,from freshly explanted hearts,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.904637984457073,platform_constant,2.904637984457073,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40076574,,GSM8658916,,,test,hesrt,samples/GSE283269/GSM8658916,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659160,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3051,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.061337527690202,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659160,,,test,sda-all,samples/GSE283283/GSM8659160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659161,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2917,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.079650024804434,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659161,,,test,sda-all,samples/GSE283283/GSM8659161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659162,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2870,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.096597327861834,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659162,,,test,sda-all,samples/GSE283283/GSM8659162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659163,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2493,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9994093648481184,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659163,,,test,sda-all,samples/GSE283283/GSM8659163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659164,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,blue bright-field stain (heuristic),2214,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.020913427001122,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659164,,,test,sda-all,samples/GSE283283/GSM8659164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659165,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3219,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.995006980606368,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659165,,,test,sda-all,samples/GSE283283/GSM8659165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659166,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2665,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.005304742036996,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659166,,,test,sda-all,samples/GSE283283/GSM8659166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659167,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),1032,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9872695607369173,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659167,,,test,sda-all,samples/GSE283283/GSM8659167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659168,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2773,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.052053105511029,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659168,,,test,sda-all,samples/GSE283283/GSM8659168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659169,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2799,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.030167548135657,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659169,,,test,sda-all,samples/GSE283283/GSM8659169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659170,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2647,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.127875593632909,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659170,,,test,sda-all,samples/GSE283283/GSM8659170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659171,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2320,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9852448168859222,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659171,,,test,sda-all,samples/GSE283283/GSM8659171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659172,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2064,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0162838805809145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659172,,,test,sda-all,samples/GSE283283/GSM8659172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659173,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3163,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.014430204865883,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659173,,,test,sda-all,samples/GSE283283/GSM8659173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659174,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2976,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0153281596841754,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659174,,,test,sda-all,samples/GSE283283/GSM8659174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659175,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1993,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.979841000495759,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659175,,,test,sda-all,samples/GSE283283/GSM8659175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659176,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,916,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:2,2,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0180906092726785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659176,,,test,sda-all,samples/GSE283283/GSM8659176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659177,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),2333,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:3,3,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.029211787317144,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659177,,,test,sda-all,samples/GSE283283/GSM8659177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659178,heart,normal,,heart,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3059,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:3,3,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.021103656322361,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659178,,,test,sda-all,samples/GSE283283/GSM8659178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659179,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3221,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:3,3,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.008234930794761,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659179,,,test,sda-all,samples/GSE283283/GSM8659179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659180,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,1766,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:3,3,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.004307291924765,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659180,,,test,sda-all,samples/GSE283283/GSM8659180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659181,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,572,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:3,3,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.021334872913344,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659181,,,test,sda-all,samples/GSE283283/GSM8659181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659182,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2835,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.042111357124931,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659182,,,test,sda-all,samples/GSE283283/GSM8659182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659183,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2745,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.038919627461689,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659183,,,test,sda-all,samples/GSE283283/GSM8659183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659184,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2693,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0357505012199475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,,,,,,GSM8659184,,,test,sda-all,samples/GSE283283/GSM8659184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659185,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2492,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0340283609126155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659185,,,test,sda-all,samples/GSE283283/GSM8659185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659186,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),1484,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.991489196645646,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659186,,,test,sda-all,samples/GSE283283/GSM8659186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659187,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2592,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.992359003194768,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659187,,,test,sda-all,samples/GSE283283/GSM8659187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659188,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2694,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.984012573125066,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659188,,,test,sda-all,samples/GSE283283/GSM8659188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659189,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),684,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:4,4,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.023488019808868,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659189,,,test,sda-all,samples/GSE283283/GSM8659189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659190,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),3032,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.054260593018216,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659190,,,test,sda-all,samples/GSE283283/GSM8659190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659191,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2981,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.030631376964513,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659191,,,test,sda-all,samples/GSE283283/GSM8659191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659192,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,blue bright-field stain (heuristic),2972,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.062258384092843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659192,,,test,sda-all,samples/GSE283283/GSM8659192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659193,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,blue bright-field stain (heuristic),2886,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.041006877554884,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659193,,,test,sda-all,samples/GSE283283/GSM8659193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659194,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,blue bright-field stain (heuristic),2302,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0524509419472885,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659194,,,test,sda-all,samples/GSE283283/GSM8659194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659195,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3365,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.034059713959665,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659195,,,test,sda-all,samples/GSE283283/GSM8659195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659196,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2765,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9434008171543127,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659196,,,test,sda-all,samples/GSE283283/GSM8659196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659197,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,blue bright-field stain (heuristic),1067,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:5,5,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9899200107607506,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659197,,,test,sda-all,samples/GSE283283/GSM8659197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659198,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,blue bright-field stain (heuristic),3029,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.02291587134598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659198,,,test,sda-all,samples/GSE283283/GSM8659198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659199,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,blue bright-field stain (heuristic),3075,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.061809670019915,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659199,,,test,sda-all,samples/GSE283283/GSM8659199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659200,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,blue bright-field stain (heuristic),2856,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.035970158569859,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659200,,,test,sda-all,samples/GSE283283/GSM8659200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8659201,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,blue bright-field stain (heuristic),2552,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.050155101893555,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659201,,,test,sda-all,samples/GSE283283/GSM8659201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659202,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3888,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.016959042115016,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659202,,,test,sda-all,samples/GSE283283/GSM8659202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659203,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,blue bright-field stain (heuristic),2546,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.089685939021284,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659203,,,test,sda-all,samples/GSE283283/GSM8659203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659204,lung,normal,,lung,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2222,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.933682473949982,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659204,,,test,sda-all,samples/GSE283283/GSM8659204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659205,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,blue bright-field stain (heuristic),779,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:6,6,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.003483188627135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659205,,,test,sda-all,samples/GSE283283/GSM8659205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8659206,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,blue bright-field stain (heuristic),2822,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.060246074934693,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659206,,,test,sda-all,samples/GSE283283/GSM8659206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659207,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,blue bright-field stain (heuristic),2860,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.037153584364845,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659207,,,test,sda-all,samples/GSE283283/GSM8659207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659208,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,blue bright-field stain (heuristic),2667,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.030070458297049,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659208,,,test,sda-all,samples/GSE283283/GSM8659208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659209,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,blue bright-field stain (heuristic),2657,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.053260673788865,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659209,,,test,sda-all,samples/GSE283283/GSM8659209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659210,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,blue bright-field stain (heuristic),2206,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.041382802662724,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659210,,,test,sda-all,samples/GSE283283/GSM8659210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659211,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3615,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.972410883913362,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659211,,,test,sda-all,samples/GSE283283/GSM8659211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659212,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2478,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.064442111041482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659212,,,test,sda-all,samples/GSE283283/GSM8659212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659213,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2407,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9416956405426973,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659213,,,test,sda-all,samples/GSE283283/GSM8659213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659214,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,884,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:7,7,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0233232257919225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659214,,,test,sda-all,samples/GSE283283/GSM8659214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8659215,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2625,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0929276804509405,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659215,,,test,sda-all,samples/GSE283283/GSM8659215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659216,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2854,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.047272234794894,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659216,,,test,sda-all,samples/GSE283283/GSM8659216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659217,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2758,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.011913435419856,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659217,,,test,sda-all,samples/GSE283283/GSM8659217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659218,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2817,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.06043297879224,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659218,,,test,sda-all,samples/GSE283283/GSM8659218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659219,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2362,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.962142439085437,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659219,,,test,sda-all,samples/GSE283283/GSM8659219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659220,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3560,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.027568544879345,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659220,,,test,sda-all,samples/GSE283283/GSM8659220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659221,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3754,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.96047838125204,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659221,,,test,sda-all,samples/GSE283283/GSM8659221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659222,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,625,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:8,8,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.030445819311681,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659222,,,test,sda-all,samples/GSE283283/GSM8659222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8659223,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),3094,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.04325342364886,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659223,,,test,sda-all,samples/GSE283283/GSM8659223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659224,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),3001,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.048136137708625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659224,,,test,sda-all,samples/GSE283283/GSM8659224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659225,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),2985,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.069257421806186,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659225,,,test,sda-all,samples/GSE283283/GSM8659225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659226,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),2451,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0351352926792154,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659226,,,test,sda-all,samples/GSE283283/GSM8659226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8659227,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),1371,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9920128467334357,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659227,,,test,sda-all,samples/GSE283283/GSM8659227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659228,heart,normal,,heart,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3406,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.025798211134232,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659228,,,test,sda-all,samples/GSE283283/GSM8659228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659229,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3306,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9706314276995385,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659229,,,test,sda-all,samples/GSE283283/GSM8659229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659230,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),3127,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.024445774953519,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659230,,,test,sda-all,samples/GSE283283/GSM8659230,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8659231,lung,normal,,lung,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2926,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9909513294773635,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659231,,,test,sda-all,samples/GSE283283/GSM8659231,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659232,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,806,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:9,9,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9965116703162837,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659232,,,test,sda-all,samples/GSE283283/GSM8659232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659233,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2679,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.05236308565057,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659233,,,test,sda-all,samples/GSE283283/GSM8659233,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659234,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3822,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9471191748061574,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659234,,,test,sda-all,samples/GSE283283/GSM8659234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659235,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3170,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.997431384529482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659235,,,test,sda-all,samples/GSE283283/GSM8659235,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659236,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),567,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.007675062428843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659236,,,test,sda-all,samples/GSE283283/GSM8659236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659237,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3178,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0126444822144265,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659237,,,test,sda-all,samples/GSE283283/GSM8659237,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659238,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2748,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9485626827531446,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659238,,,test,sda-all,samples/GSE283283/GSM8659238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659239,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1676,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.033425641891224,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659239,,,test,sda-all,samples/GSE283283/GSM8659239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8659240,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1034,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.049413978941004,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659240,,,test,sda-all,samples/GSE283283/GSM8659240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659241,heart,normal,,heart,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3753,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.015908668211418,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659241,,,test,sda-all,samples/GSE283283/GSM8659241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659242,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),3776,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.031740484447056,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659242,,,test,sda-all,samples/GSE283283/GSM8659242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659243,lung,normal,,lung,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2120,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.915708320394564,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659243,,,test,sda-all,samples/GSE283283/GSM8659243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM8659244,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,812,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.054498688005127,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659244,,,test,sda-all,samples/GSE283283/GSM8659244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659245,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2676,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.038665241797769,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659245,,,test,sda-all,samples/GSE283283/GSM8659245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659246,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2818,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9970726439233135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659246,,,test,sda-all,samples/GSE283283/GSM8659246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659247,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2766,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.035694608096834,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659247,,,test,sda-all,samples/GSE283283/GSM8659247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659248,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2579,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.991414121158241,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659248,,,test,sda-all,samples/GSE283283/GSM8659248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659249,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),1660,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.985577814965058,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659249,,,test,sda-all,samples/GSE283283/GSM8659249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659250,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3152,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.016901818321172,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659250,,,test,sda-all,samples/GSE283283/GSM8659250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659251,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3330,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.96492900780111,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659251,,,test,sda-all,samples/GSE283283/GSM8659251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659252,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1712,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9815970399070992,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659252,,,test,sda-all,samples/GSE283283/GSM8659252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659253,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,375,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:13,13,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.034136847191625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659253,,,test,sda-all,samples/GSE283283/GSM8659253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659254,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2896,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.021398961104235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659254,,,test,sda-all,samples/GSE283283/GSM8659254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659255,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2709,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.010674369029283,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659255,,,test,sda-all,samples/GSE283283/GSM8659255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659256,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2792,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.020727263061611,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659256,,,test,sda-all,samples/GSE283283/GSM8659256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659257,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2670,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.020518976278763,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659257,,,test,sda-all,samples/GSE283283/GSM8659257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659258,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),2131,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.000122088566401,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659258,,,test,sda-all,samples/GSE283283/GSM8659258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659259,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3337,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.040989563921613,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659259,,,test,sda-all,samples/GSE283283/GSM8659259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659260,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3502,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9651629801421935,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659260,,,test,sda-all,samples/GSE283283/GSM8659260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659261,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3407,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.014785412842418,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659261,,,test,sda-all,samples/GSE283283/GSM8659261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8659262,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1185,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.981572733662267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659262,,,test,sda-all,samples/GSE283283/GSM8659262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8659263,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,973,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,Spleen,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:14,14,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.0360940567935595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659263,,,test,sda-all,samples/GSE283283/GSM8659263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659264,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),3018,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.02102724930815,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659264,,,test,sda-all,samples/GSE283283/GSM8659264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8659265,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),3012,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9878983609029652,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659265,,,test,sda-all,samples/GSE283283/GSM8659265,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659266,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),2997,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.022621045548528,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659266,,,test,sda-all,samples/GSE283283/GSM8659266,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659267,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),2593,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9894290431592148,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659267,,,test,sda-all,samples/GSE283283/GSM8659267,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659268,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),1640,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.969364028775509,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659268,,,test,sda-all,samples/GSE283283/GSM8659268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8659269,heart,normal,,heart,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,fluorescence: blue (heuristic),3179,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.027942530706114,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659269,,,test,sda-all,samples/GSE283283/GSM8659269,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8659270,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3489,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:15,15,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.930112519263687,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659270,,,test,sda-all,samples/GSE283283/GSM8659270,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659271,brain,disease,cerebral malaria,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2627,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H299,BNI-H299,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.050343246799887,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659271,,,test,sda-all,samples/GSE283283/GSM8659271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM8659272,brain,disease,cerebral malaria,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,823,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H299,BNI-H299,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.042265759613864,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659272,,,test,sda-all,samples/GSE283283/GSM8659272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659273,kidney,disease,cerebral malaria,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3328,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H299,BNI-H299,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.052882285176205,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659273,,,test,sda-all,samples/GSE283283/GSM8659273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.8}",,
GSM8659274,liver,disease,cerebral malaria,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2615,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H299,BNI-H299,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.030481945260867,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659274,,,test,sda-all,samples/GSE283283/GSM8659274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM8659275,lung,disease,cerebral malaria,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,4222,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H299,BNI-H299,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.036079468373582,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659275,,,test,sda-all,samples/GSE283283/GSM8659275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM8659276,brain,disease,cerebral malaria,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,1018,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H300,BNI-H300,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,3.9869794000344783,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659276,,,test,sda-all,samples/GSE283283/GSM8659276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659277,liver,disease,cerebral malaria,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3572,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H300,BNI-H300,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.049355046469575,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659277,,,test,sda-all,samples/GSE283283/GSM8659277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM8659278,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2865,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H303,BNI-H303,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.059875814057969,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659278,,,test,sda-all,samples/GSE283283/GSM8659278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM8659279,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,538,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H303,BNI-H303,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.029740681857099,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659279,,,test,sda-all,samples/GSE283283/GSM8659279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM8659280,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3772,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H303,BNI-H303,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.009168471421128,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659280,,,test,sda-all,samples/GSE283283/GSM8659280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8659281,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3277,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H303,BNI-H303,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.036457228228818,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659281,,,test,sda-all,samples/GSE283283/GSM8659281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM8659282,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2865,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H303,BNI-H303,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.004132944110288,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659282,,,test,sda-all,samples/GSE283283/GSM8659282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 0.92}",,
GSM8659283,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2359,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H304,BNI-H304,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.027342246568631,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659283,,,test,sda-all,samples/GSE283283/GSM8659283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8659284,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,364,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H304,BNI-H304,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.054499113276928,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659284,,,test,sda-all,samples/GSE283283/GSM8659284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM8659285,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3453,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H304,BNI-H304,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.034824294229594,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659285,,,test,sda-all,samples/GSE283283/GSM8659285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8659286,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3207,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,male,GSE283283:BNI-H304,BNI-H304,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.015121709457296,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659286,,,test,sda-all,samples/GSE283283/GSM8659286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM8659287,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2825,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H306,BNI-H306,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.021446306733305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659287,,,test,sda-all,samples/GSE283283/GSM8659287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659288,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,675,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H306,BNI-H306,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.015504592788235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659288,,,test,sda-all,samples/GSE283283/GSM8659288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 0.85}",,
GSM8659289,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4009,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H306,BNI-H306,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,3.9709504132558417,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659289,,,test,sda-all,samples/GSE283283/GSM8659289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659290,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3619,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H306,BNI-H306,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.035586643849085,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659290,,,test,sda-all,samples/GSE283283/GSM8659290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM8659291,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3210,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H306,BNI-H306,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.015235458345807,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659291,,,test,sda-all,samples/GSE283283/GSM8659291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659292,brain,normal,,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,450,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H307,BNI-H307,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.024027507549883,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659292,,,test,sda-all,samples/GSE283283/GSM8659292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM8659293,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3254,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H307,BNI-H307,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.016868904122183,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659293,,,test,sda-all,samples/GSE283283/GSM8659293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8659294,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3614,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H307,BNI-H307,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.010260847111578,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659294,,,test,sda-all,samples/GSE283283/GSM8659294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM8659295,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3200,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H307,BNI-H307,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,3.9902444541286397,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659295,,,test,sda-all,samples/GSE283283/GSM8659295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM8659296,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3722,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H308,BNI-H308,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.017251306789092,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659296,,,test,sda-all,samples/GSE283283/GSM8659296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8659297,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4295,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H308,BNI-H308,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,3.9787098581159563,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659297,,,test,sda-all,samples/GSE283283/GSM8659297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8659298,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3730,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,,luna,,Wildtype,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H308,BNI-H308,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.043616680812108,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659298,,,test,sda-all,samples/GSE283283/GSM8659298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM8659299,brain,disease,cerebral malaria,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3197,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H309,BNI-H309,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.026619238742295,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659299,,,test,sda-all,samples/GSE283283/GSM8659299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8659300,brain,disease,cerebral malaria,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1142,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H309,BNI-H309,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,3.991560606043408,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659300,,,test,sda-all,samples/GSE283283/GSM8659300,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM8659301,kidney,disease,cerebral malaria,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3299,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H309,BNI-H309,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.027997594384482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659301,,,test,sda-all,samples/GSE283283/GSM8659301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM8659302,liver,disease,cerebral malaria,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4070,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H309,BNI-H309,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.043063007383025,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659302,,,test,sda-all,samples/GSE283283/GSM8659302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8659303,lung,disease,cerebral malaria,lung,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3680,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H309,BNI-H309,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,3.9993676953393833,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659303,,,test,sda-all,samples/GSE283283/GSM8659303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM8659304,brain,disease,cerebral malaria,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2202,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H310,BNI-H310,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.031549279864547,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659304,,,test,sda-all,samples/GSE283283/GSM8659304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8659305,kidney,disease,cerebral malaria,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2829,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H310,BNI-H310,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.049072042326761,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659305,,,test,sda-all,samples/GSE283283/GSM8659305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM8659306,liver,disease,cerebral malaria,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4089,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H310,BNI-H310,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.030349918439763,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659306,,,test,sda-all,samples/GSE283283/GSM8659306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8659307,lung,disease,cerebral malaria,lung,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3058,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H310,BNI-H310,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.036597722864844,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659307,,,test,sda-all,samples/GSE283283/GSM8659307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM8659308,brain,disease,cerebral malaria,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3613,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H311,BNI-H311,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.056848865755035,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659308,,,test,sda-all,samples/GSE283283/GSM8659308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM8659309,brain,disease,cerebral malaria,olfactory bulb,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,871,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002264,Olfactory bulb,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H311,BNI-H311,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.036632683389745,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659309,,,test,sda-all,samples/GSE283283/GSM8659309,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8659310,kidney,disease,cerebral malaria,kidney,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,3391,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H311,BNI-H311,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.0347052986355605,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659310,,,test,sda-all,samples/GSE283283/GSM8659310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM8659311,liver,disease,cerebral malaria,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,4157,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H311,BNI-H311,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,4.070035861129638,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659311,,,test,sda-all,samples/GSE283283/GSM8659311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.81}",,
GSM8659312,lung,disease,cerebral malaria,lung,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2919,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0005625,luna,Cerebral malaria,Plasmodium berghei ANKA infection,age rule: age with unit,adult,2 months,extracted field,female,GSE283283:BNI-H311,BNI-H311,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,38514,counts,um,1.0,verified,3.9916398914026043,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8659312,,,test,sda-all,samples/GSE283283/GSM8659312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8659313,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,42298,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,24082,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659313,,,test,sda-all,samples/GSE283283/GSM8659313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659314,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,42518,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,24758,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659314,,,test,sda-all,samples/GSE283283/GSM8659314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659315,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,38115,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,25457,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659315,,,test,sda-all,samples/GSE283283/GSM8659315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659316,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,36161,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,25229,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659316,,,test,sda-all,samples/GSE283283/GSM8659316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659317,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,27216,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,17 weeks,extracted field,male,GSE283283:10,10,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,25476,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659317,,,test,sda-all,samples/GSE283283/GSM8659317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659318,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,44249,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,24687,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659318,,,test,sda-all,samples/GSE283283/GSM8659318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659319,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,43579,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,24738,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659319,,,test,sda-all,samples/GSE283283/GSM8659319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659320,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,43861,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,26010,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659320,,,test,sda-all,samples/GSE283283/GSM8659320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659321,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,39532,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,38409,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659321,,,test,sda-all,samples/GSE283283/GSM8659321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659322,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,30569,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,adult,73 weeks,extracted field,male,GSE283283:11,11,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,24806,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659322,,,test,sda-all,samples/GSE283283/GSM8659322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8659323,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Stereo-seq,Stereo-seq,False,,42789,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,25276,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659323,,,test,sda-all,samples/GSE283283/GSM8659323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659324,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Stereo-seq,Stereo-seq,False,,42728,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,25160,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659324,,,test,sda-all,samples/GSE283283/GSM8659324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8659325,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Stereo-seq,Stereo-seq,False,,42512,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,25725,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659325,,,test,sda-all,samples/GSE283283/GSM8659325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659326,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Stereo-seq,Stereo-seq,False,,35887,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,25560,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659326,,,test,sda-all,samples/GSE283283/GSM8659326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8659327,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Stereo-seq,Stereo-seq,False,,31460,Spatiotemporal transcriptomic niches of complement pathway and serine protease inhibitor activation in aging and infection,GSE283283,GSE283283,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Wildtype,age rule: age with unit,aged,112 weeks,extracted field,male,GSE283283:12,12,fresh frozen,fresh frozen,release v3,sequencing-based,StereoSeq,,,bin,25180,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8659327,,,test,sda-all,samples/GSE283283/GSM8659327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8659692,adrenal gland,normal,,adrenal tissue,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,992,Spatial Transcriptomic Profiling of the Mouse Adrenal Gland and Adjacent Adipose Tissue,GSE283302,GSE283302,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0018303,adrenal gland with adjacent adipose tissue,,luna,,intact,age rule: age with unit,adult,10 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,2.823022150545312,platform_constant,2.823022150545312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41442035,,GSM8659692,,,train,hesrt,samples/GSE283302/GSM8659692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8660262,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,BMK S1000,BMKMANU S1000,True,H&E,16340,Comprehensive immune profiling reveals IFN-γ signaling in T cells mediates parasite phagocytosis in a rodent malaria model : Spatial transcriptomics data,GSE283333,GSE283333,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,noninfection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,BMKMANU Spatial Transcriptomics,,,,54838,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8660262,,,train,hesrt,samples/GSE283333/GSM8660262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8660263,lung,disease,malaria,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,BMK S1000,BMKMANU S1000,True,H&E,37716,Comprehensive immune profiling reveals IFN-γ signaling in T cells mediates parasite phagocytosis in a rodent malaria model : Spatial transcriptomics data,GSE283333,GSE283333,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005136,luna,,Pb NK65-E infection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,BMKMANU Spatial Transcriptomics,,,,54838,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8660263,,,train,hesrt,samples/GSE283333/GSM8660263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662111,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Slide-seq,Curio Seeker,False,,68890,Clonal lineage tracing and transcriptomics of cortical progenitor populations reveal maintenance of differentiation potential.,GSE283411,GSE283411,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,forebrain,,luna,,wild-type,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Curio Seeker,,,bead,24102,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,39952245,,GSM8662111,,,train,sda-all,samples/GSE283411/GSM8662111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662112,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,juvenile,unknown,Slide-seq,Curio Seeker,False,,65031,Clonal lineage tracing and transcriptomics of cortical progenitor populations reveal maintenance of differentiation potential.,GSE283411,GSE283411,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,forebrain,,luna,,wild-type,luna,juvenile,,not stated,,,,,,release v3,sequencing-based,Curio Seeker,,,bead,23626,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,39952245,,GSM8662112,,,train,sda-all,samples/GSE283411/GSM8662112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8662113,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4238,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,GSE283412,GSE283412,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,MpBC,MONDO:0007254,luna,metaplastic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,0.8333043996551018,platform_constant,0.8333043996551018,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662113,,,train,hesrt,samples/GSE283412/GSM8662113,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662114,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4254,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,GSE283412,GSE283412,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,MpBC,MONDO:0007254,luna,metaplastic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,0.8333333333333334,platform_constant,0.8333333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662114,,,train,hesrt,samples/GSE283412/GSM8662114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8662115,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4548,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,GSE283412,GSE283412,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,MpBC,MONDO:0007254,luna,metaplastic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,0.826898230594723,platform_constant,0.826898230594723,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662115,,,train,hesrt,samples/GSE283412/GSM8662115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8662116,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4537,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,GSE283412,GSE283412,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,MpBC,MONDO:0007254,luna,metaplastic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,0.8333333333333334,platform_constant,0.8333333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662116,,,train,hesrt,samples/GSE283412/GSM8662116,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8662117,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4638,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,GSE283412,GSE283412,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,MpBC,MONDO:0007254,luna,metaplastic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,0.8130081300813008,platform_constant,0.8130081300813008,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662117,,,train,hesrt,samples/GSE283412/GSM8662117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8662118,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4258,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,GSE283412,GSE283412,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,MpBC,MONDO:0007254,luna,metaplastic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,0.8293972762090773,platform_constant,0.8293972762090773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662118,,,train,hesrt,samples/GSE283412/GSM8662118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8662119,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4258,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,GSE283412,GSE283412,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,MpBC,MONDO:0007254,luna,metaplastic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,0.8333333333333334,platform_constant,0.8333333333333334,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662119,,,train,hesrt,samples/GSE283412/GSM8662119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8662120,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4240,Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.,GSE283412,GSE283412,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,MpBC,MONDO:0007254,luna,metaplastic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,0.819672131147541,platform_constant,0.819672131147541,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40790295,10.1038/s41523-025-00807-x,GSM8662120,,,train,hesrt,samples/GSE283412/GSM8662120,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8662286,brain,normal,,amygdala,primary tissue,Mus musculus,house mouse,not stated,female,Molecular Cartography,Molecular Cartography,False,,8034,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,GSE283418,GSE283418,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001876,amygdala brain tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,99,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662286,,,train,sda-all,samples/GSE283418/GSM8662286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662287,brain,normal,,amygdala,primary tissue,Mus musculus,house mouse,not stated,female,Molecular Cartography,Molecular Cartography,False,,7430,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,GSE283418,GSE283418,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001876,amygdala brain tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,98,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662287,,,train,sda-all,samples/GSE283418/GSM8662287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662288,brain,normal,,amygdala,primary tissue,Mus musculus,house mouse,not stated,female,Molecular Cartography,Molecular Cartography,False,,5899,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,GSE283418,GSE283418,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001876,amygdala brain tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,98,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662288,,,train,sda-all,samples/GSE283418/GSM8662288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662289,brain,normal,,amygdala,primary tissue,Mus musculus,house mouse,not stated,female,Molecular Cartography,Molecular Cartography,False,,6574,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,GSE283418,GSE283418,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001876,amygdala brain tissue,,luna,,,luna,not stated,,extracted field,female,,,,,release v3,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,98,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662289,,,train,sda-all,samples/GSE283418/GSM8662289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662290,brain,normal,,amygdala,primary tissue,Mus musculus,house mouse,not stated,male,Molecular Cartography,Molecular Cartography,False,,6800,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,GSE283418,GSE283418,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001876,amygdala brain tissue,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,100,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662290,,,train,sda-all,samples/GSE283418/GSM8662290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662291,brain,normal,,amygdala,primary tissue,Mus musculus,house mouse,not stated,male,Molecular Cartography,Molecular Cartography,False,,7083,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,GSE283418,GSE283418,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001876,amygdala brain tissue,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,99,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662291,,,train,sda-all,samples/GSE283418/GSM8662291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662292,brain,normal,,amygdala,primary tissue,Mus musculus,house mouse,not stated,male,Molecular Cartography,Molecular Cartography,False,,9706,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,GSE283418,GSE283418,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001876,amygdala brain tissue,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,99,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662292,,,train,sda-all,samples/GSE283418/GSM8662292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662293,brain,normal,,amygdala,primary tissue,Mus musculus,house mouse,not stated,male,Molecular Cartography,Molecular Cartography,False,,6967,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,GSE283418,GSE283418,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001876,amygdala brain tissue,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,100,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662293,,,train,sda-all,samples/GSE283418/GSM8662293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662294,brain,normal,,amygdala,primary tissue,Mus musculus,house mouse,not stated,male,Molecular Cartography,Molecular Cartography,False,,8040,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,GSE283418,GSE283418,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001876,amygdala brain tissue,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,100,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662294,,,train,sda-all,samples/GSE283418/GSM8662294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662295,brain,normal,,amygdala,primary tissue,Mus musculus,house mouse,not stated,male,Molecular Cartography,Molecular Cartography,False,,7418,Spatial molecular profiling of amygdalar neurons enables precision pharmacology against pain unpleasantness,GSE283418,GSE283418,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001876,amygdala brain tissue,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,Resolve Biosciences Molecular Cartography,,,cell,99,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM8662295,,,train,sda-all,samples/GSE283418/GSM8662295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8662446,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium HD,Visium HD,True,H&E,302036,Gain-of-function ENL YEATS domain mutations impede nephrogenesis through gene expression control,GSE283435,GSE283435,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,Six2-TGCtg/+;Enl+/+ and Six2-TGCtg/+;EnlT1/+,luna,embryonic,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visiumHD,,,bin,19059,counts,um,1.0,verified,1.3381432859179192,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40087269,,GSM8662446,,,train,sda-all,samples/GSE283435/GSM8662446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM8662447,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium HD,Visium HD,True,H&E,232640,Gain-of-function ENL YEATS domain mutations impede nephrogenesis through gene expression control,GSE283435,GSE283435,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidney,,luna,,Foxd1GC/+;Enl+/+ and Foxd1GC/+;EnlT1/+,luna,embryonic,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visiumHD,,,bin,19059,counts,um,1.0,verified,1.333983123513762,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40087269,,GSM8662447,,,train,sda-all,samples/GSE283435/GSM8662447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM8664001,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,44302,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],GSE283497,GSE283497,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Whole brain organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.49998559196443265,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664001,,,train,sda-all,samples/GSE283497/GSM8664001,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8664002,brain,disease,high grade astrocytic tumor,brain,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,69800,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],GSE283497,GSE283497,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Whole brain section,MONDO:0016680,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.5000006467970609,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664002,,,train,sda-all,samples/GSE283497/GSM8664002,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.39, ""disease_status"": 0.35000000000000003, ""uberon"": 0.84, ""life_stage"": 0.99}",sample_kind;disease_status,low_confidence_annotation
GSM8664003,brain,disease,glioblastoma,brain,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,29567,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],GSE283497,GSE283497,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0000955,Whole brain organoid,MONDO:0018177,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.49999230137548756,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664003,,,train,sda-all,samples/GSE283497/GSM8664003,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.56, ""life_stage"": 1.0}",organ;disease_status;uberon,low_confidence_annotation
GSM8664004,brain,disease,glioblastoma,brain,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,69218,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],GSE283497,GSE283497,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Whole brain section,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.5000120606478291,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664004,,,train,sda-all,samples/GSE283497/GSM8664004,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.75, ""disease_status"": 0.55, ""uberon"": 0.65, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8664005,brain,disease,glioblastoma,brain,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,13735,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],GSE283497,GSE283497,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Whole brain organoid,MONDO:0018177,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.5000443141532589,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664005,,,train,sda-all,samples/GSE283497/GSM8664005,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 0.58, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8664006,brain,disease,glioblastoma,brain,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,39391,Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [Xenium Spatial Transcriptomics],GSE283497,GSE283497,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Whole brain section,MONDO:0018177,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Human Brain Gene Expression,xenium-1.4.0.6,cell,541,counts,um,1.0,verified,0.5000064486174165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39836549,,GSM8664006,,,train,sda-all,samples/GSE283497/GSM8664006,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.65, ""disease_status"": 0.41000000000000003, ""uberon"": 0.73, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8672828,brain,disease,"atypical teratoid rhabdoid tumor, SHH-activated",brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,13178,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",GSE283832,GSE283832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,FFPE ATRT-SHH tissue,MONDO:1060249,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,475,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672828,,,train,sda-all,samples/GSE283832/GSM8672828,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8672829,brain,disease,"atypical teratoid rhabdoid tumor, TYR-activated",brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,126189,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",GSE283832,GSE283832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,FFPE ATRT-TYR tissue,MONDO:1060251,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,475,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672829,,,train,sda-all,samples/GSE283832/GSM8672829,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8672830,brain,disease,"atypical teratoid rhabdoid tumor, SHH-activated",brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,153559,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",GSE283832,GSE283832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,FFPE ATRT-SHH tissue,MONDO:1060249,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,475,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672830,,,train,sda-all,samples/GSE283832/GSM8672830,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8672831,brain,disease,"atypical teratoid rhabdoid tumor, MYC-activated",brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,168003,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",GSE283832,GSE283832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,FFPE ATRT-MYC tissue,MONDO:1060250,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,475,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672831,,,train,sda-all,samples/GSE283832/GSM8672831,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8672832,brain,disease,"atypical teratoid rhabdoid tumor, MYC-activated",brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,344229,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",GSE283832,GSE283832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,FFPE ATRT-MYC tissue,MONDO:1060250,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,475,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672832,,,train,sda-all,samples/GSE283832/GSM8672832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8672833,brain,disease,"atypical teratoid rhabdoid tumor, SHH-activated",brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,454004,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",GSE283832,GSE283832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,FFPE ATRT-SHH tissue,MONDO:1060249,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,475,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672833,,,train,sda-all,samples/GSE283832/GSM8672833,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8672834,brain,disease,"atypical teratoid rhabdoid tumor, TYR-activated",brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,101399,"A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories [Xenium Spatial_Transcriptomics]",GSE283832,GSE283832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,FFPE ATRT-TYR tissue,MONDO:1060251,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,475,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40726147,,GSM8672834,,,train,sda-all,samples/GSE283832/GSM8672834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8673457,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,85556,Cranial radiotherapy profoundly affects glia without inducing widespread cellular senescence,GSE283863,GSE283863,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40518745,,GSM8673457,,,train,sda-all,samples/GSE283863/GSM8673457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8673673,small intestine,perturbation,,subdivision of digestive tract,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,7009,Prior High Fiber Intake Impinges on the Cellular Responses of Mesenteric Adipose and Intestinal Tissues to Subsequent High Fat Feeding [Spatial Transcriptomics],GSE283872,GSE283872,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004921,duodenum tissue and colon tissue,,luna,,"CD or HfiD feed 5w, HFD feed 0w",luna,not stated,,not stated,,,,,,release v3,sequencing-based,stereo-seq,,,bin,19714,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,41520334,,GSM8673673,,,test,sda-all,samples/GSE283872/GSM8673673,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.58, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8673674,small intestine,perturbation,,subdivision of digestive tract,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,11454,Prior High Fiber Intake Impinges on the Cellular Responses of Mesenteric Adipose and Intestinal Tissues to Subsequent High Fat Feeding [Spatial Transcriptomics],GSE283872,GSE283872,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004921,duodenum tissue and colon tissue,,luna,,"CD or HfiD feed 5w, HFD feed 4w",luna,not stated,,not stated,,,,,,release v3,sequencing-based,stereo-seq,,,bin,22679,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,41520334,,GSM8673674,,,test,sda-all,samples/GSE283872/GSM8673674,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.64, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8673675,small intestine,perturbation,,subdivision of digestive tract,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,7013,Prior High Fiber Intake Impinges on the Cellular Responses of Mesenteric Adipose and Intestinal Tissues to Subsequent High Fat Feeding [Spatial Transcriptomics],GSE283872,GSE283872,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004921,duodenum tissue and colon tissue,,luna,,"CD or HfiD feed 5w, HFD feed 8w",luna,not stated,,not stated,,,,,,release v3,sequencing-based,stereo-seq,,,bin,20514,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,41520334,,GSM8673675,,,test,sda-all,samples/GSE283872/GSM8673675,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 0.53, ""life_stage"": 0.59}",disease_status;uberon;life_stage,low_confidence_annotation
GSM9093371,small intestine,perturbation,,subdivision of digestive tract,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,7045,Prior High Fiber Intake Impinges on the Cellular Responses of Mesenteric Adipose and Intestinal Tissues to Subsequent High Fat Feeding [Spatial Transcriptomics],GSE283872,GSE283872,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004921,duodenum tissue and colon tissue,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,stereo-seq,,,bin,23902,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,41520334,,GSM9093371,,,test,sda-all,samples/GSE283872/GSM9093371,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.42, ""life_stage"": 0.42}",uberon;life_stage,low_confidence_annotation
GSM8673819,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Other,"other (named in GEO, not in list)",False,,25000000,Spatial Transcriptomics Sequencing of Mouse Liver at 2µm Resolution Using a Novel Spatial DNA Chip,GSE283883,GSE283883,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,,luna,adult,Adult,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,other,,,bin,18617,counts,native_grid,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM8673819,,,train,sda-all,samples/GSE283883/GSM8673819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8674625,colon,disease,Crohn disease,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3807,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.180973644906514,platform_constant,4.180973644906514,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674625,,,test,hesrt,samples/GSE283945/GSM8674625,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.36, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8674626,small intestine,normal,,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4609,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,intestine,,luna,NON_CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.542581539458849,platform_constant,4.542581539458849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674626,,,test,hesrt,samples/GSE283945/GSM8674626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.68, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8674627,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4922,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.504416950558462,platform_constant,4.504416950558462,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674627,,,test,hesrt,samples/GSE283945/GSM8674627,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674628,colon,disease,inflammatory bowel disease,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4274,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,intestine,MONDO:0005265,luna,DIVERTICULAR,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.184513218012733,platform_constant,4.184513218012733,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674628,,,test,hesrt,samples/GSE283945/GSM8674628,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8674629,rectum,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4317,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.33274332068294,platform_constant,4.33274332068294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674629,,,test,hesrt,samples/GSE283945/GSM8674629,sda-tissue-disease-2.3,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8674630,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2241,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.33274332068294,platform_constant,4.33274332068294,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674630,,,test,hesrt,samples/GSE283945/GSM8674630,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8674631,small intestine,disease,intestinal disorder,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4129,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005020,mondo_predicate,NON_CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.502876195509259,platform_constant,4.502876195509259,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674631,,,test,hesrt,samples/GSE283945/GSM8674631,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8674632,colon,disease,diverticulitis of colon,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2526,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,intestine,MONDO:0001674,luna,DIVERTICULAR,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.502654878783435,platform_constant,4.502654878783435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674632,,,test,hesrt,samples/GSE283945/GSM8674632,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674633,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4987,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.091303775696442,platform_constant,4.091303775696442,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674633,,,test,hesrt,samples/GSE283945/GSM8674633,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 0.99}",,
GSM8674634,colon,disease,intestinal disorder,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4053,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,intestine,MONDO:0005020,luna,DIVERTICULAR,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.1626467922476005,platform_constant,4.1626467922476005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674634,,,test,hesrt,samples/GSE283945/GSM8674634,sda-tissue-disease-2.3,"{""organ"": 0.32, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.46, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8674635,small intestine,disease,intestinal disorder,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2349,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005020,luna,DIVERTICULAR,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.5008848989510595,platform_constant,4.5008848989510595,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674635,,,test,hesrt,samples/GSE283945/GSM8674635,sda-tissue-disease-2.3,"{""organ"": 0.37, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.74, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8674636,small intestine,normal,,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1906,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,,luna,healthy,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.503539817874815,platform_constant,4.503539817874815,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674636,,,test,hesrt,samples/GSE283945/GSM8674636,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8674637,small intestine,normal,,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2446,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,,luna,NON_CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.181817592994338,platform_constant,4.181817592994338,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674637,,,test,hesrt,samples/GSE283945/GSM8674637,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.81, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM8674638,colon,disease,Crohn disease,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3523,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.501106270646435,platform_constant,4.501106270646435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674638,,,test,hesrt,samples/GSE283945/GSM8674638,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8674639,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3580,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.481894755399299,platform_constant,4.481894755399299,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674639,,,test,hesrt,samples/GSE283945/GSM8674639,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8674640,other,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4215,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.463210336916926,platform_constant,4.463210336916926,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674640,,,test,hesrt,samples/GSE283945/GSM8674640,sda-tissue-disease-2.3,"{""organ"": 0.32, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8674641,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3024,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.1816370562619145,platform_constant,4.1816370562619145,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674641,,,test,hesrt,samples/GSE283945/GSM8674641,sda-tissue-disease-2.3,"{""organ"": 0.26, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8674642,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2892,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.181637056261894,platform_constant,4.181637056261894,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674642,,,test,hesrt,samples/GSE283945/GSM8674642,sda-tissue-disease-2.3,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8674643,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3695,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.5006640068144605,platform_constant,4.5006640068144605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674643,,,test,hesrt,samples/GSE283945/GSM8674643,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8674644,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4824,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.46232823194684,platform_constant,4.46232823194684,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674644,,,test,hesrt,samples/GSE283945/GSM8674644,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8674645,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2815,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.502424677183384,platform_constant,4.502424677183384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674645,,,test,hesrt,samples/GSE283945/GSM8674645,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674646,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3818,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.185693124333748,platform_constant,4.185693124333748,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674646,,,test,hesrt,samples/GSE283945/GSM8674646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674647,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4208,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.482379004224967,platform_constant,4.482379004224967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674647,,,test,hesrt,samples/GSE283945/GSM8674647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674648,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3889,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.146770520839288,platform_constant,4.146770520839288,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674648,,,test,hesrt,samples/GSE283945/GSM8674648,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674649,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2947,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.502433583812056,platform_constant,4.502433583812056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674649,,,test,hesrt,samples/GSE283945/GSM8674649,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM8674650,small intestine,normal,,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1626,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,,luna,healthy,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.328149240356721,platform_constant,4.328149240356721,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674650,,,test,hesrt,samples/GSE283945/GSM8674650,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8674651,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1725,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.208242307465107,platform_constant,4.208242307465107,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674651,,,test,hesrt,samples/GSE283945/GSM8674651,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8674652,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1742,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.190101254370074,platform_constant,4.190101254370074,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674652,,,test,hesrt,samples/GSE283945/GSM8674652,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8674653,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4544,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.460340211414209,platform_constant,4.460340211414209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674653,,,test,hesrt,samples/GSE283945/GSM8674653,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8674654,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4597,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.4993822454587855,platform_constant,4.4993822454587855,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674654,,,test,hesrt,samples/GSE283945/GSM8674654,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8674655,small intestine,normal,,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2737,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,,luna,healthy,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.501327435158773,platform_constant,4.501327435158773,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674655,,,test,hesrt,samples/GSE283945/GSM8674655,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8674656,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1335,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.184349571110809,platform_constant,4.184349571110809,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674656,,,test,hesrt,samples/GSE283945/GSM8674656,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8674657,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3812,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.181194495233687,platform_constant,4.181194495233687,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674657,,,test,hesrt,samples/GSE283945/GSM8674657,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8674658,small intestine,normal,,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4619,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,,luna,healthy,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.479912358574608,platform_constant,4.479912358574608,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674658,,,test,hesrt,samples/GSE283945/GSM8674658,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8674660,small intestine,disease,Crohn disease,intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3928,Spatially Resolved Insights Into Fistulating Crohn’s Disease Pathogenesis - Visium Spatial Transcriptomics,GSE283945,GSE283945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000160,intestine,MONDO:0005011,luna,CD,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,4.4814543143128995,platform_constant,4.4814543143128995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41224999,,GSM8674660,,,test,hesrt,samples/GSE283945/GSM8674660,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8674927,brain,disease,glioblastoma,brain,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3894,Spatially resolved chimeric analysis reveals extracellular CKB-mediated ATP uptake at the glioma-astrocyte invasive front,GSE283959,GSE283959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31253,counts,pixel,4.248884419718703,platform_constant,4.248884419718703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40991701,,GSM8674927,,,train,hesrt,samples/GSE283959/GSM8674927,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8674928,brain,disease,glioblastoma,brain,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2116,Spatially resolved chimeric analysis reveals extracellular CKB-mediated ATP uptake at the glioma-astrocyte invasive front,GSE283959,GSE283959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0018177,luna,glioblastoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31253,counts,pixel,3.9445902670833455,platform_constant,3.9445902670833455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40991701,,GSM8674928,,,train,hesrt,samples/GSE283959/GSM8674928,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8674929,brain,disease,glioma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2263,Spatially resolved chimeric analysis reveals extracellular CKB-mediated ATP uptake at the glioma-astrocyte invasive front,GSE283959,GSE283959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0021042,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31253,counts,pixel,3.944590267083312,platform_constant,3.944590267083312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40991701,,GSM8674929,,,train,hesrt,samples/GSE283959/GSM8674929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.34, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8674930,brain,disease,glioma,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2255,Spatially resolved chimeric analysis reveals extracellular CKB-mediated ATP uptake at the glioma-astrocyte invasive front,GSE283959,GSE283959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0021042,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31253,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40991701,,GSM8674930,,,train,hesrt,samples/GSE283959/GSM8674930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.35000000000000003, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8675019,heart,normal,,heart,primary tissue,Homo sapiens,human,embryonic,male,Visium,Visium,True,H&E,2161,Multi-modal refinement of the human heart atlas during the first gestational trimester,GSE283967,GSE283967,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,,luna,,,age rule: post-conception / gestational weeks,embryonic,8.4 post-conception weeks,extracted field,male,GSE283967:HEF_DN_F0000476,HEF_DN_F0000476,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4310304787039547,platform_constant,0.5000046197883382,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39927812,10.1242/dev.204555,GSM8675019,,,train,hesrt,samples/GSE283967/GSM8675019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM8675020,heart,normal,,heart,primary tissue,Homo sapiens,human,embryonic,male,Visium,Visium,True,H&E,1900,Multi-modal refinement of the human heart atlas during the first gestational trimester,GSE283967,GSE283967,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,,luna,,,age rule: post-conception / gestational weeks,embryonic,8.4 post-conception weeks,extracted field,male,GSE283967:HEF_DN_F0000476,HEF_DN_F0000476,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.4310304787039547,platform_constant,0.49999349770685,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39927812,10.1242/dev.204555,GSM8675020,,,train,hesrt,samples/GSE283967/GSM8675020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.6000000000000001}",,
GSM8675021,heart,normal,,heart,primary tissue,Homo sapiens,human,fetal,female,Visium,Visium,True,H&E,2318,Multi-modal refinement of the human heart atlas during the first gestational trimester,GSE283967,GSE283967,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,,luna,,,age rule: post-conception / gestational weeks,fetal,9.7 post-conception weeks,extracted field,female,GSE283967:HEF_DN_F0000298,HEF_DN_F0000298,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9031305926310043,platform_constant,3.9031305926310043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39927812,10.1242/dev.204555,GSM8675021,,,train,hesrt,samples/GSE283967/GSM8675021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.97}",,
GSM8675811,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,male,MERFISH/MERSCOPE,MERFISH,False,,26082,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,54,extracted field,Male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675811,,,train,sda-all,samples/GSE284005/GSM8675811,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675812,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERFISH,False,,31404,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,53,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675812,,,train,sda-all,samples/GSE284005/GSM8675812,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675813,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERFISH,False,,31244,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,47,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675813,,,train,sda-all,samples/GSE284005/GSM8675813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675814,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,male,MERFISH/MERSCOPE,MERFISH,False,,20149,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,61,extracted field,Male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675814,,,train,sda-all,samples/GSE284005/GSM8675814,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675815,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,male,MERFISH/MERSCOPE,MERFISH,False,,25153,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,48,extracted field,Male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675815,,,train,sda-all,samples/GSE284005/GSM8675815,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675816,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERFISH,False,,10768,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,56,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675816,,,train,sda-all,samples/GSE284005/GSM8675816,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675817,brain,normal,,white matter,primary tissue,Homo sapiens,human,aged,female,MERFISH/MERSCOPE,MERFISH,False,,22299,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",,luna,multiple sclerosis,,age rule: bare number read as years,aged,76,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675817,,,train,sda-all,samples/GSE284005/GSM8675817,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8675818,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERFISH,False,,12134,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,52,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675818,,,train,sda-all,samples/GSE284005/GSM8675818,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8675819,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,aged,female,MERFISH/MERSCOPE,MERFISH,False,,25892,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,aged,77,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675819,,,train,sda-all,samples/GSE284005/GSM8675819,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675820,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,male,MERFISH/MERSCOPE,MERFISH,False,,35559,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,45,extracted field,Male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675820,,,train,sda-all,samples/GSE284005/GSM8675820,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675821,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,aged,female,MERFISH/MERSCOPE,MERFISH,False,,34952,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,aged,66,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675821,,,train,sda-all,samples/GSE284005/GSM8675821,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675822,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERFISH,False,,10814,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,54,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675822,,,train,sda-all,samples/GSE284005/GSM8675822,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675823,brain,normal,,white matter,primary tissue,Homo sapiens,human,aged,female,MERFISH/MERSCOPE,MERFISH,False,,5550,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",,luna,multiple sclerosis,,age rule: bare number read as years,aged,77,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675823,,,train,sda-all,samples/GSE284005/GSM8675823,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8675824,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERFISH,False,,22006,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,60,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675824,,,train,sda-all,samples/GSE284005/GSM8675824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675825,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,male,MERFISH/MERSCOPE,MERFISH,False,,24415,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,57,extracted field,Male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675825,,,train,sda-all,samples/GSE284005/GSM8675825,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675826,brain,disease,multiple sclerosis,white matter,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERFISH,False,,19373,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",MONDO:0005301,luna,multiple sclerosis,,age rule: bare number read as years,adult,39,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675826,,,train,sda-all,samples/GSE284005/GSM8675826,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8675827,brain,normal,,white matter,primary tissue,Homo sapiens,human,aged,female,MERFISH/MERSCOPE,MERFISH,False,,44000,A single-cell resolution spatial transcriptomics atlas of human multiple sclerosis lesion (MERSCOPE),GSE284005,GSE284005,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002316,"White Matter, fresh frozen",,luna,multiple sclerosis,,age rule: bare number read as years,aged,75,extracted field,Female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,500,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8675827,,,train,sda-all,samples/GSE284005/GSM8675827,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8676453,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,20613,Integration and annotation of spatial multi-omic data with DIRAC highlights spatial organization of lymphoid organs,GSE284032,GSE284032,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002370,thymus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,bin,26647,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8676453,,,test,sda-all,samples/GSE284032/GSM8676453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8740089,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,16478,Integration and annotation of spatial multi-omic data with DIRAC highlights spatial organization of lymphoid organs,GSE284032,GSE284032,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,bin,26068,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8740089,,,test,sda-all,samples/GSE284032/GSM8740089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8676719,plant,disease,infectious disease,,primary tissue,Solanum lycopersicum,tomato,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,1835,A spatiotemporal atlas of giant-cell formation during Meloidogyne incognita infection in tomato roots,GSE284052,GSE284052,4081,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,luna,,Root,MONDO:0005550,luna,,Meloidogyne incognita-inoculated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,GEO series text (assay_final.csv),sequencing-based,other,,,spot,35887,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42581385,,GSM8676719,,,train,sda-all,samples/GSE284052/GSM8676719,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.97}",,
GSM8676720,plant,disease,infectious disease,,primary tissue,Solanum lycopersicum,tomato,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,3883,A spatiotemporal atlas of giant-cell formation during Meloidogyne incognita infection in tomato roots,GSE284052,GSE284052,4081,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,luna,,Root,MONDO:0005550,luna,,Meloidogyne incognita-inoculated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,GEO series text (assay_final.csv),sequencing-based,other,,,spot,35887,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42581385,,GSM8676720,,,train,sda-all,samples/GSE284052/GSM8676720,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.97}",,
GSM8676721,plant,disease,infectious disease,,primary tissue,Solanum lycopersicum,tomato,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,8067,A spatiotemporal atlas of giant-cell formation during Meloidogyne incognita infection in tomato roots,GSE284052,GSE284052,4081,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,luna,,Root,MONDO:0005550,luna,,Meloidogyne incognita-inoculated,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,GEO series text (assay_final.csv),sequencing-based,other,,,spot,35887,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42581385,,GSM8676721,,,train,sda-all,samples/GSE284052/GSM8676721,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.84}",,
GSM8677818,bone,normal,,head of femur,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,4992,Spatial multi-modal atlas of bone tissue from human femur,GSE284089,GSE284089,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006767,Human femoral head,,luna,,,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.101255468834063,platform_constant,6.101255468834063,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39817519,,GSM8677818,,,train,hesrt,samples/GSE284089/GSM8677818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8678305,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,263,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678305,,,train,sda-all,samples/GSE284137/GSM8678305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.52, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8678306,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,244,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678306,,,train,sda-all,samples/GSE284137/GSM8678306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.39, ""life_stage"": 0.89}",uberon,low_confidence_annotation
GSM8678307,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,180,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678307,,,train,sda-all,samples/GSE284137/GSM8678307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM8678308,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,167,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678308,,,train,sda-all,samples/GSE284137/GSM8678308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM8678309,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,221,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678309,,,train,sda-all,samples/GSE284137/GSM8678309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.66, ""life_stage"": 0.99}",,
GSM8678310,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,148,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678310,,,train,sda-all,samples/GSE284137/GSM8678310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM8678311,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,277,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678311,,,train,sda-all,samples/GSE284137/GSM8678311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.68, ""life_stage"": 0.9500000000000001}",,
GSM8678312,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,333,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678312,,,train,sda-all,samples/GSE284137/GSM8678312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.47000000000000003, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678313,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,132,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678313,,,train,sda-all,samples/GSE284137/GSM8678313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM8678314,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,189,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678314,,,train,sda-all,samples/GSE284137/GSM8678314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8300000000000001, ""life_stage"": 0.99}",,
GSM8678315,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,216,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678315,,,train,sda-all,samples/GSE284137/GSM8678315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8200000000000001, ""life_stage"": 0.99}",,
GSM8678316,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,245,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678316,,,train,sda-all,samples/GSE284137/GSM8678316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.81, ""life_stage"": 0.99}",,
GSM8678317,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,133,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,2w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678317,,,train,sda-all,samples/GSE284137/GSM8678317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.55, ""life_stage"": 0.28}",uberon;life_stage,low_confidence_annotation
GSM8678318,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,127,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,2w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678318,,,train,sda-all,samples/GSE284137/GSM8678318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.44, ""life_stage"": 0.22}",uberon;life_stage,low_confidence_annotation
GSM8678319,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,88,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,2w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678319,,,train,sda-all,samples/GSE284137/GSM8678319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.81, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8678320,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,84,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,not stated,2w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678320,,,train,sda-all,samples/GSE284137/GSM8678320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.85, ""life_stage"": 0.63}",,
GSM8678321,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,246,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,not stated,2w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678321,,,train,sda-all,samples/GSE284137/GSM8678321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.8, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8678322,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,259,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,2w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678322,,,train,sda-all,samples/GSE284137/GSM8678322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.71, ""life_stage"": 0.23}",life_stage,low_confidence_annotation
GSM8678323,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,193,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,neonatal or infant,2w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678323,,,train,sda-all,samples/GSE284137/GSM8678323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.96, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM8678324,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,188,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,not stated,2w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678324,,,train,sda-all,samples/GSE284137/GSM8678324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.84, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8678325,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,104,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,2w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678325,,,train,sda-all,samples/GSE284137/GSM8678325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.9400000000000001, ""life_stage"": 0.23}",life_stage,low_confidence_annotation
GSM8678326,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,173,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,neonatal or infant,2w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678326,,,train,sda-all,samples/GSE284137/GSM8678326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.79, ""life_stage"": 0.25}",life_stage,low_confidence_annotation
GSM8678327,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,176,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,neonatal or infant,2w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678327,,,train,sda-all,samples/GSE284137/GSM8678327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.68, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM8678328,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,173,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,2w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678328,,,train,sda-all,samples/GSE284137/GSM8678328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.56, ""life_stage"": 0.35000000000000003}",uberon;life_stage,low_confidence_annotation
GSM8678329,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,33,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678329,,,train,sda-all,samples/GSE284137/GSM8678329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.59, ""life_stage"": 0.84}",uberon,low_confidence_annotation
GSM8678330,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,28,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678330,,,train,sda-all,samples/GSE284137/GSM8678330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.5, ""life_stage"": 0.78}",uberon,low_confidence_annotation
GSM8678331,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,70,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678331,,,train,sda-all,samples/GSE284137/GSM8678331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.87, ""life_stage"": 0.91}",,
GSM8678332,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,43,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678332,,,train,sda-all,samples/GSE284137/GSM8678332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.79, ""life_stage"": 0.91}",,
GSM8678333,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,72,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678333,,,train,sda-all,samples/GSE284137/GSM8678333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.87, ""life_stage"": 0.9400000000000001}",,
GSM8678334,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,31,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678334,,,train,sda-all,samples/GSE284137/GSM8678334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.43, ""life_stage"": 0.62}",uberon,low_confidence_annotation
GSM8678335,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,66,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678335,,,train,sda-all,samples/GSE284137/GSM8678335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.47000000000000003, ""life_stage"": 0.91}",uberon,low_confidence_annotation
GSM8678336,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,66,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678336,,,train,sda-all,samples/GSE284137/GSM8678336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.77, ""life_stage"": 0.86}",,
GSM8678337,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,44,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678337,,,train,sda-all,samples/GSE284137/GSM8678337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.72, ""life_stage"": 0.79}",,
GSM8678338,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,46,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678338,,,train,sda-all,samples/GSE284137/GSM8678338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.68, ""life_stage"": 0.8200000000000001}",,
GSM8678339,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,38,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678339,,,train,sda-all,samples/GSE284137/GSM8678339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.68, ""life_stage"": 0.91}",,
GSM8678340,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,157,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678340,,,train,sda-all,samples/GSE284137/GSM8678340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.45, ""life_stage"": 0.52}",uberon;life_stage,low_confidence_annotation
GSM8678341,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,212,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678341,,,train,sda-all,samples/GSE284137/GSM8678341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.8200000000000001, ""life_stage"": 0.32}",life_stage,low_confidence_annotation
GSM8678342,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,131,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678342,,,train,sda-all,samples/GSE284137/GSM8678342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.88, ""life_stage"": 0.66}",,
GSM8678343,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,133,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678343,,,train,sda-all,samples/GSE284137/GSM8678343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.89, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8678344,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,75,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678344,,,train,sda-all,samples/GSE284137/GSM8678344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.87, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8678345,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,109,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678345,,,train,sda-all,samples/GSE284137/GSM8678345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.76, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM8678346,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,91,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M9,M9,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678346,,,train,sda-all,samples/GSE284137/GSM8678346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.56, ""life_stage"": 0.64}",uberon,low_confidence_annotation
GSM8678347,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,103,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M9,M9,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678347,,,train,sda-all,samples/GSE284137/GSM8678347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.6900000000000001, ""life_stage"": 0.25}",life_stage,low_confidence_annotation
GSM8678348,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,147,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M9,M9,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678348,,,train,sda-all,samples/GSE284137/GSM8678348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.85, ""life_stage"": 0.32}",life_stage,low_confidence_annotation
GSM8678349,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,146,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M9,M9,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678349,,,train,sda-all,samples/GSE284137/GSM8678349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.87, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM8678350,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,91,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M9,M9,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678350,,,train,sda-all,samples/GSE284137/GSM8678350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.76, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8678351,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,101,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,neonatal or infant,2w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678351,,,train,sda-all,samples/GSE284137/GSM8678351,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.6000000000000001, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8678352,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,127,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,2w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678352,,,train,sda-all,samples/GSE284137/GSM8678352,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.52, ""life_stage"": 0.22}",uberon;life_stage,low_confidence_annotation
GSM8678353,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,72,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,neonatal or infant,2w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678353,,,train,sda-all,samples/GSE284137/GSM8678353,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.89, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM8678354,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,98,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,not stated,2w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678354,,,train,sda-all,samples/GSE284137/GSM8678354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.92, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM8678355,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,102,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,2w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678355,,,train,sda-all,samples/GSE284137/GSM8678355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.81, ""life_stage"": 0.22}",life_stage,low_confidence_annotation
GSM8678356,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,90,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,2w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678356,,,train,sda-all,samples/GSE284137/GSM8678356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.81, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM8678357,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,137,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,2w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678357,,,train,sda-all,samples/GSE284137/GSM8678357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.77, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM8678358,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,130,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,not stated,2w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678358,,,train,sda-all,samples/GSE284137/GSM8678358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.46, ""life_stage"": 0.45}",uberon;life_stage,low_confidence_annotation
GSM8678359,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,102,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,neonatal or infant,2w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678359,,,train,sda-all,samples/GSE284137/GSM8678359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.87, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8678360,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,143,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,neonatal or infant,2w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678360,,,train,sda-all,samples/GSE284137/GSM8678360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.91, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM8678361,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,168,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,2w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678361,,,train,sda-all,samples/GSE284137/GSM8678361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.55, ""uberon"": 0.65, ""life_stage"": 0.25}",disease_status;life_stage,low_confidence_annotation
GSM8678362,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,122,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,2w,extracted field,female,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678362,,,train,sda-all,samples/GSE284137/GSM8678362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.71, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM8678363,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,63,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678363,,,train,sda-all,samples/GSE284137/GSM8678363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.52, ""life_stage"": 0.48}",uberon;life_stage,low_confidence_annotation
GSM8678364,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,89,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678364,,,train,sda-all,samples/GSE284137/GSM8678364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.59, ""life_stage"": 0.31}",uberon;life_stage,low_confidence_annotation
GSM8678365,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,133,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678365,,,train,sda-all,samples/GSE284137/GSM8678365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.91, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8678366,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,127,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678366,,,train,sda-all,samples/GSE284137/GSM8678366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.88, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8678367,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,171,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678367,,,train,sda-all,samples/GSE284137/GSM8678367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.75, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM8678368,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,114,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678368,,,train,sda-all,samples/GSE284137/GSM8678368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.56, ""life_stage"": 0.6900000000000001}",uberon,low_confidence_annotation
GSM8678369,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,125,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678369,,,train,sda-all,samples/GSE284137/GSM8678369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.64, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8678370,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,42,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678370,,,train,sda-all,samples/GSE284137/GSM8678370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.84, ""life_stage"": 0.9500000000000001}",,
GSM8678371,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,58,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678371,,,train,sda-all,samples/GSE284137/GSM8678371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.81, ""life_stage"": 0.92}",,
GSM8678372,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,56,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678372,,,train,sda-all,samples/GSE284137/GSM8678372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.73, ""life_stage"": 0.9500000000000001}",,
GSM8678373,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,39,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: days in an age series,not stated,0d,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678373,,,train,sda-all,samples/GSE284137/GSM8678373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.66, ""life_stage"": 0.89}",,
GSM8678374,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,506,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678374,,,train,sda-all,samples/GSE284137/GSM8678374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.43, ""life_stage"": 0.52}",uberon;life_stage,low_confidence_annotation
GSM8678375,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,489,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678375,,,train,sda-all,samples/GSE284137/GSM8678375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.45, ""life_stage"": 0.58}",uberon;life_stage,low_confidence_annotation
GSM8678376,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,208,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678376,,,train,sda-all,samples/GSE284137/GSM8678376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.8, ""life_stage"": 0.77}",,
GSM8678377,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,204,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678377,,,train,sda-all,samples/GSE284137/GSM8678377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 0.7000000000000001}",,
GSM8678378,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,189,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,not stated,3w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678378,,,train,sda-all,samples/GSE284137/GSM8678378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.8, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM8678379,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,164,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678379,,,train,sda-all,samples/GSE284137/GSM8678379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.62, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8678380,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,548,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678380,,,train,sda-all,samples/GSE284137/GSM8678380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.54, ""life_stage"": 0.72}",uberon,low_confidence_annotation
GSM8678381,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,506,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678381,,,train,sda-all,samples/GSE284137/GSM8678381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.52, ""life_stage"": 0.53}",uberon;life_stage,low_confidence_annotation
GSM8678382,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,211,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678382,,,train,sda-all,samples/GSE284137/GSM8678382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.87, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8678383,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,214,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678383,,,train,sda-all,samples/GSE284137/GSM8678383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.89, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8678384,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,169,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,3w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678384,,,train,sda-all,samples/GSE284137/GSM8678384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.66, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8678385,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,199,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,3w,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678385,,,train,sda-all,samples/GSE284137/GSM8678385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.74, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8678386,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,496,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678386,,,train,sda-all,samples/GSE284137/GSM8678386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.61, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8678387,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,510,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678387,,,train,sda-all,samples/GSE284137/GSM8678387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.64, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM8678388,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,275,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678388,,,train,sda-all,samples/GSE284137/GSM8678388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.81, ""life_stage"": 0.79}",,
GSM8678389,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,250,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678389,,,train,sda-all,samples/GSE284137/GSM8678389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.9500000000000001, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8678390,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,158,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678390,,,train,sda-all,samples/GSE284137/GSM8678390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.81, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8678391,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,156,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,3w,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678391,,,train,sda-all,samples/GSE284137/GSM8678391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.8, ""life_stage"": 0.64}",,
GSM8678392,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,359,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M9,M9,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678392,,,train,sda-all,samples/GSE284137/GSM8678392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.66, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM8678393,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,345,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M9,M9,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678393,,,train,sda-all,samples/GSE284137/GSM8678393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.43, ""life_stage"": 0.44}",uberon;life_stage,low_confidence_annotation
GSM8678394,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,269,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M9,M9,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678394,,,train,sda-all,samples/GSE284137/GSM8678394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8300000000000001, ""life_stage"": 0.8}",,
GSM8678395,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,234,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M9,M9,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678395,,,train,sda-all,samples/GSE284137/GSM8678395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.73, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM8678396,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,212,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M9,M9,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678396,,,train,sda-all,samples/GSE284137/GSM8678396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.79, ""life_stage"": 0.71}",,
GSM8678397,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,271,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,not stated,3w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678397,,,train,sda-all,samples/GSE284137/GSM8678397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.35000000000000003, ""life_stage"": 0.66}",uberon,low_confidence_annotation
GSM8678398,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,250,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678398,,,train,sda-all,samples/GSE284137/GSM8678398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.5700000000000001, ""life_stage"": 0.42}",uberon;life_stage,low_confidence_annotation
GSM8678399,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,178,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678399,,,train,sda-all,samples/GSE284137/GSM8678399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.89, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM8678400,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,172,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678400,,,train,sda-all,samples/GSE284137/GSM8678400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.8300000000000001, ""life_stage"": 0.65}",,
GSM8678401,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,179,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,3w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678401,,,train,sda-all,samples/GSE284137/GSM8678401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.6000000000000001, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8678402,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,185,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,3w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678402,,,train,sda-all,samples/GSE284137/GSM8678402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.66, ""life_stage"": 0.6000000000000001}",,
GSM8678403,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,234,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678403,,,train,sda-all,samples/GSE284137/GSM8678403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.46, ""life_stage"": 0.56}",uberon;life_stage,low_confidence_annotation
GSM8678404,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,267,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,not stated,3w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678404,,,train,sda-all,samples/GSE284137/GSM8678404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.5, ""life_stage"": 0.59}",uberon;life_stage,low_confidence_annotation
GSM8678405,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,187,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678405,,,train,sda-all,samples/GSE284137/GSM8678405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.92, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8678406,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,177,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,not stated,3w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678406,,,train,sda-all,samples/GSE284137/GSM8678406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.84, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8678407,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,118,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,3w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678407,,,train,sda-all,samples/GSE284137/GSM8678407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.64, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8678408,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,131,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,not stated,3w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678408,,,train,sda-all,samples/GSE284137/GSM8678408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.75, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM8678409,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,278,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678409,,,train,sda-all,samples/GSE284137/GSM8678409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.71, ""life_stage"": 0.89}",,
GSM8678410,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,288,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678410,,,train,sda-all,samples/GSE284137/GSM8678410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.61, ""life_stage"": 0.9500000000000001}",,
GSM8678411,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,221,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678411,,,train,sda-all,samples/GSE284137/GSM8678411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.47000000000000003, ""life_stage"": 0.93}",uberon,low_confidence_annotation
GSM8678412,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,234,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678412,,,train,sda-all,samples/GSE284137/GSM8678412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.71, ""life_stage"": 0.79}",,
GSM8678413,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,190,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678413,,,train,sda-all,samples/GSE284137/GSM8678413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.92, ""life_stage"": 0.88}",,
GSM8678414,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,93,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678414,,,train,sda-all,samples/GSE284137/GSM8678414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.84, ""life_stage"": 0.86}",,
GSM8678415,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,249,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678415,,,train,sda-all,samples/GSE284137/GSM8678415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.56, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8678416,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,336,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678416,,,train,sda-all,samples/GSE284137/GSM8678416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.64, ""life_stage"": 0.9500000000000001}",,
GSM8678417,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,253,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678417,,,train,sda-all,samples/GSE284137/GSM8678417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.89, ""life_stage"": 0.7000000000000001}",,
GSM8678418,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,290,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678418,,,train,sda-all,samples/GSE284137/GSM8678418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.84, ""life_stage"": 0.9400000000000001}",,
GSM8678419,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,59,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678419,,,train,sda-all,samples/GSE284137/GSM8678419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.64, ""life_stage"": 0.99}",,
GSM8678420,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,240,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678420,,,train,sda-all,samples/GSE284137/GSM8678420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.45, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678421,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,84,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678421,,,train,sda-all,samples/GSE284137/GSM8678421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.54, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8678422,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,178,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678422,,,train,sda-all,samples/GSE284137/GSM8678422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.88, ""life_stage"": 0.86}",,
GSM8678423,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,172,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678423,,,train,sda-all,samples/GSE284137/GSM8678423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM8678424,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,127,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678424,,,train,sda-all,samples/GSE284137/GSM8678424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.6900000000000001, ""life_stage"": 0.99}",,
GSM8678425,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,177,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678425,,,train,sda-all,samples/GSE284137/GSM8678425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.75, ""life_stage"": 0.98}",,
GSM8678426,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,205,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,2w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678426,,,train,sda-all,samples/GSE284137/GSM8678426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.49, ""life_stage"": 0.32}",uberon;life_stage,low_confidence_annotation
GSM8678427,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,183,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,not stated,2w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678427,,,train,sda-all,samples/GSE284137/GSM8678427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.84, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8678428,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,347,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678428,,,train,sda-all,samples/GSE284137/GSM8678428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.61, ""life_stage"": 0.99}",,
GSM8678429,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,410,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678429,,,train,sda-all,samples/GSE284137/GSM8678429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678430,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,422,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678430,,,train,sda-all,samples/GSE284137/GSM8678430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8678431,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,441,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678431,,,train,sda-all,samples/GSE284137/GSM8678431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.93, ""life_stage"": 0.98}",,
GSM8678432,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,240,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678432,,,train,sda-all,samples/GSE284137/GSM8678432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.65, ""life_stage"": 0.99}",,
GSM8678433,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,251,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678433,,,train,sda-all,samples/GSE284137/GSM8678433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.6900000000000001, ""life_stage"": 0.97}",,
GSM8678434,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,333,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678434,,,train,sda-all,samples/GSE284137/GSM8678434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.43, ""life_stage"": 0.87}",uberon,low_confidence_annotation
GSM8678435,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,320,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678435,,,train,sda-all,samples/GSE284137/GSM8678435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678436,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,341,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678436,,,train,sda-all,samples/GSE284137/GSM8678436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678437,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,338,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678437,,,train,sda-all,samples/GSE284137/GSM8678437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 0.99}",,
GSM8678438,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,255,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678438,,,train,sda-all,samples/GSE284137/GSM8678438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 0.99}",,
GSM8678439,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,235,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678439,,,train,sda-all,samples/GSE284137/GSM8678439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 0.89}",,
GSM8678440,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,319,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678440,,,train,sda-all,samples/GSE284137/GSM8678440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8678441,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,309,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678441,,,train,sda-all,samples/GSE284137/GSM8678441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678442,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,402,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678442,,,train,sda-all,samples/GSE284137/GSM8678442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 0.98}",,
GSM8678443,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,333,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678443,,,train,sda-all,samples/GSE284137/GSM8678443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM8678444,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,243,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678444,,,train,sda-all,samples/GSE284137/GSM8678444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.76, ""life_stage"": 0.99}",,
GSM8678445,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,253,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678445,,,train,sda-all,samples/GSE284137/GSM8678445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678446,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,397,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678446,,,train,sda-all,samples/GSE284137/GSM8678446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678447,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,389,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678447,,,train,sda-all,samples/GSE284137/GSM8678447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8678448,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,401,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678448,,,train,sda-all,samples/GSE284137/GSM8678448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM8678449,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,303,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678449,,,train,sda-all,samples/GSE284137/GSM8678449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8678450,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,336,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678450,,,train,sda-all,samples/GSE284137/GSM8678450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8678451,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,352,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678451,,,train,sda-all,samples/GSE284137/GSM8678451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678452,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,342,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678452,,,train,sda-all,samples/GSE284137/GSM8678452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM8678453,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,340,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678453,,,train,sda-all,samples/GSE284137/GSM8678453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8678454,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,254,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678454,,,train,sda-all,samples/GSE284137/GSM8678454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678455,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,456,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678455,,,train,sda-all,samples/GSE284137/GSM8678455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678456,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,286,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678456,,,train,sda-all,samples/GSE284137/GSM8678456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM8678457,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,383,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678457,,,train,sda-all,samples/GSE284137/GSM8678457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8678458,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,369,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678458,,,train,sda-all,samples/GSE284137/GSM8678458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM8678459,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,288,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678459,,,train,sda-all,samples/GSE284137/GSM8678459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678460,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,311,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678460,,,train,sda-all,samples/GSE284137/GSM8678460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM8678461,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,323,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678461,,,train,sda-all,samples/GSE284137/GSM8678461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678462,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,263,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678462,,,train,sda-all,samples/GSE284137/GSM8678462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM8678463,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,352,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678463,,,train,sda-all,samples/GSE284137/GSM8678463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8678464,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,377,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678464,,,train,sda-all,samples/GSE284137/GSM8678464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8678465,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,345,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678465,,,train,sda-all,samples/GSE284137/GSM8678465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678466,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,291,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678466,,,train,sda-all,samples/GSE284137/GSM8678466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM8678467,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,383,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678467,,,train,sda-all,samples/GSE284137/GSM8678467,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8678468,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,328,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678468,,,train,sda-all,samples/GSE284137/GSM8678468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8678469,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,372,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678469,,,train,sda-all,samples/GSE284137/GSM8678469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM8678470,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,362,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678470,,,train,sda-all,samples/GSE284137/GSM8678470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678471,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,297,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678471,,,train,sda-all,samples/GSE284137/GSM8678471,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8678472,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,260,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678472,,,train,sda-all,samples/GSE284137/GSM8678472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM8678473,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,339,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678473,,,train,sda-all,samples/GSE284137/GSM8678473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8678474,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,male,ST (legacy),ST (legacy),False,,259,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,aged,2yr,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678474,,,train,sda-all,samples/GSE284137/GSM8678474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8678475,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,39,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678475,,,train,sda-all,samples/GSE284137/GSM8678475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.77, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM8678476,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,33,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678476,,,train,sda-all,samples/GSE284137/GSM8678476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.5700000000000001, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8678477,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,29,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678477,,,train,sda-all,samples/GSE284137/GSM8678477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.8300000000000001, ""life_stage"": 0.93}",,
GSM8678478,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,48,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678478,,,train,sda-all,samples/GSE284137/GSM8678478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.77, ""life_stage"": 0.8200000000000001}",,
GSM8678479,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,61,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678479,,,train,sda-all,samples/GSE284137/GSM8678479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.62, ""life_stage"": 0.87}",,
GSM8678480,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,287,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678480,,,train,sda-all,samples/GSE284137/GSM8678480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.56, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678481,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,293,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678481,,,train,sda-all,samples/GSE284137/GSM8678481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678482,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,228,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678482,,,train,sda-all,samples/GSE284137/GSM8678482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 0.92}",,
GSM8678483,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,242,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678483,,,train,sda-all,samples/GSE284137/GSM8678483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM8678484,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,237,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678484,,,train,sda-all,samples/GSE284137/GSM8678484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.74, ""life_stage"": 0.99}",,
GSM8678485,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,207,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678485,,,train,sda-all,samples/GSE284137/GSM8678485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678486,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,295,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678486,,,train,sda-all,samples/GSE284137/GSM8678486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.54, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678487,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,223,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678487,,,train,sda-all,samples/GSE284137/GSM8678487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678488,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,315,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678488,,,train,sda-all,samples/GSE284137/GSM8678488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.84, ""life_stage"": 0.93}",,
GSM8678489,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,264,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678489,,,train,sda-all,samples/GSE284137/GSM8678489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 0.98}",,
GSM8678490,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,251,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M8,M8,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678490,,,train,sda-all,samples/GSE284137/GSM8678490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.65, ""life_stage"": 0.99}",,
GSM8678491,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,96,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678491,,,train,sda-all,samples/GSE284137/GSM8678491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.4, ""life_stage"": 0.39}",uberon;life_stage,low_confidence_annotation
GSM8678492,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,92,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678492,,,train,sda-all,samples/GSE284137/GSM8678492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.5, ""life_stage"": 0.42}",uberon;life_stage,low_confidence_annotation
GSM8678493,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,83,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678493,,,train,sda-all,samples/GSE284137/GSM8678493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.85, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8678494,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,84,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678494,,,train,sda-all,samples/GSE284137/GSM8678494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.89, ""life_stage"": 0.72}",,
GSM8678495,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,106,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678495,,,train,sda-all,samples/GSE284137/GSM8678495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.55, ""life_stage"": 0.38}",uberon;life_stage,low_confidence_annotation
GSM8678496,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,109,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M6,M6,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678496,,,train,sda-all,samples/GSE284137/GSM8678496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.77, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8678497,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,97,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678497,,,train,sda-all,samples/GSE284137/GSM8678497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.56, ""life_stage"": 0.30000000000000004}",uberon;life_stage,low_confidence_annotation
GSM8678498,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,93,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,neonatal or infant,1w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678498,,,train,sda-all,samples/GSE284137/GSM8678498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.51, ""life_stage"": 0.24}",uberon;life_stage,low_confidence_annotation
GSM8678499,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,100,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678499,,,train,sda-all,samples/GSE284137/GSM8678499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.72, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM8678500,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,105,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678500,,,train,sda-all,samples/GSE284137/GSM8678500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.89, ""life_stage"": 0.62}",,
GSM8678501,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,male,ST (legacy),ST (legacy),False,,146,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,not stated,1w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678501,,,train,sda-all,samples/GSE284137/GSM8678501,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.65, ""life_stage"": 0.65}",,
GSM8678502,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,120,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678502,,,train,sda-all,samples/GSE284137/GSM8678502,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.6900000000000001, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8678503,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,222,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678503,,,train,sda-all,samples/GSE284137/GSM8678503,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.59, ""life_stage"": 0.52}",uberon;life_stage,low_confidence_annotation
GSM8678504,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,88,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,neonatal or infant,1w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678504,,,train,sda-all,samples/GSE284137/GSM8678504,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.92, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM8678505,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,96,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678505,,,train,sda-all,samples/GSE284137/GSM8678505,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.91, ""life_stage"": 0.62}",,
GSM8678506,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,237,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678506,,,train,sda-all,samples/GSE284137/GSM8678506,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.85, ""life_stage"": 0.78}",,
GSM8678507,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,144,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,not stated,1w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678507,,,train,sda-all,samples/GSE284137/GSM8678507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.6900000000000001, ""life_stage"": 0.73}",,
GSM8678508,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,353,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678508,,,train,sda-all,samples/GSE284137/GSM8678508,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8678509,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,386,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678509,,,train,sda-all,samples/GSE284137/GSM8678509,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678510,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,373,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678510,,,train,sda-all,samples/GSE284137/GSM8678510,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678511,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,361,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678511,,,train,sda-all,samples/GSE284137/GSM8678511,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8678512,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,370,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678512,,,train,sda-all,samples/GSE284137/GSM8678512,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8678513,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,328,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678513,,,train,sda-all,samples/GSE284137/GSM8678513,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8678514,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,46,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678514,,,train,sda-all,samples/GSE284137/GSM8678514,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.35000000000000003, ""life_stage"": 0.76}",uberon,low_confidence_annotation
GSM8678515,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,53,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678515,,,train,sda-all,samples/GSE284137/GSM8678515,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.46, ""life_stage"": 0.88}",uberon,low_confidence_annotation
GSM8678516,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,56,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678516,,,train,sda-all,samples/GSE284137/GSM8678516,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.65, ""life_stage"": 0.81}",,
GSM8678517,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,49,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678517,,,train,sda-all,samples/GSE284137/GSM8678517,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.71, ""life_stage"": 0.64}",,
GSM8678518,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,50,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678518,,,train,sda-all,samples/GSE284137/GSM8678518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.73, ""life_stage"": 0.78}",,
GSM8678519,colon,normal,,colon,primary tissue,Mus musculus,house mouse,neonatal or infant,female,ST (legacy),ST (legacy),False,,65,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: days in an age series,not stated,0d,extracted field,female,GSE284137:M0,M0,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678519,,,train,sda-all,samples/GSE284137/GSM8678519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.74, ""life_stage"": 0.89}",,
GSM8678520,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,417,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678520,,,train,sda-all,samples/GSE284137/GSM8678520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.56, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678521,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,324,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678521,,,train,sda-all,samples/GSE284137/GSM8678521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM8678522,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,346,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678522,,,train,sda-all,samples/GSE284137/GSM8678522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.54, ""life_stage"": 0.86}",uberon,low_confidence_annotation
GSM8678523,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,330,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678523,,,train,sda-all,samples/GSE284137/GSM8678523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 0.99}",,
GSM8678524,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,231,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678524,,,train,sda-all,samples/GSE284137/GSM8678524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678525,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,231,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,1yr,extracted field,male,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678525,,,train,sda-all,samples/GSE284137/GSM8678525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8678526,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,352,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678526,,,train,sda-all,samples/GSE284137/GSM8678526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.36, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678527,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,374,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678527,,,train,sda-all,samples/GSE284137/GSM8678527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.88, ""life_stage"": 0.98}",,
GSM8678528,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,283,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678528,,,train,sda-all,samples/GSE284137/GSM8678528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.44, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678529,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,283,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678529,,,train,sda-all,samples/GSE284137/GSM8678529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM8678530,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,315,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678530,,,train,sda-all,samples/GSE284137/GSM8678530,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.84, ""life_stage"": 0.99}",,
GSM8678531,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,246,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,1yr,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678531,,,train,sda-all,samples/GSE284137/GSM8678531,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.64, ""life_stage"": 0.99}",,
GSM8678532,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,248,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678532,,,train,sda-all,samples/GSE284137/GSM8678532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8678533,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,271,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678533,,,train,sda-all,samples/GSE284137/GSM8678533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678534,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,225,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678534,,,train,sda-all,samples/GSE284137/GSM8678534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM8678535,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,257,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,6m,extracted field,female,GSE284137:M7,M7,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678535,,,train,sda-all,samples/GSE284137/GSM8678535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8678536,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,341,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678536,,,train,sda-all,samples/GSE284137/GSM8678536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.93, ""life_stage"": 0.98}",,
GSM8678537,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,273,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678537,,,train,sda-all,samples/GSE284137/GSM8678537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8678538,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,196,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678538,,,train,sda-all,samples/GSE284137/GSM8678538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678539,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,398,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678539,,,train,sda-all,samples/GSE284137/GSM8678539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.87, ""life_stage"": 0.89}",,
GSM8678540,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,379,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,6m,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678540,,,train,sda-all,samples/GSE284137/GSM8678540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.81, ""life_stage"": 0.97}",,
GSM8678541,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,276,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678541,,,train,sda-all,samples/GSE284137/GSM8678541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM8678542,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,259,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678542,,,train,sda-all,samples/GSE284137/GSM8678542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM8678543,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,263,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678543,,,train,sda-all,samples/GSE284137/GSM8678543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM8678544,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,247,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678544,,,train,sda-all,samples/GSE284137/GSM8678544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM8678545,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,239,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678545,,,train,sda-all,samples/GSE284137/GSM8678545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8678546,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,264,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678546,,,train,sda-all,samples/GSE284137/GSM8678546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8678547,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,540,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678547,,,train,sda-all,samples/GSE284137/GSM8678547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM8678548,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,444,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678548,,,train,sda-all,samples/GSE284137/GSM8678548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM8678549,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,569,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678549,,,train,sda-all,samples/GSE284137/GSM8678549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8678550,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,471,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678550,,,train,sda-all,samples/GSE284137/GSM8678550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678551,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,450,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678551,,,train,sda-all,samples/GSE284137/GSM8678551,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678552,colon,normal,,colon,primary tissue,Mus musculus,house mouse,aged,female,ST (legacy),ST (legacy),False,,446,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,aged,2yr,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678552,,,train,sda-all,samples/GSE284137/GSM8678552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678553,colon,normal,,right colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,261,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0008972,Proximal colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678553,,,train,sda-all,samples/GSE284137/GSM8678553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.37, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8678554,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,201,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678554,,,train,sda-all,samples/GSE284137/GSM8678554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.9500000000000001, ""life_stage"": 0.8200000000000001}",,
GSM8678555,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,139,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678555,,,train,sda-all,samples/GSE284137/GSM8678555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.85, ""life_stage"": 0.91}",,
GSM8678556,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,447,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678556,,,train,sda-all,samples/GSE284137/GSM8678556,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.74, ""life_stage"": 0.93}",,
GSM8678557,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,405,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678557,,,train,sda-all,samples/GSE284137/GSM8678557,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.6900000000000001, ""life_stage"": 0.86}",,
GSM8678558,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,354,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678558,,,train,sda-all,samples/GSE284137/GSM8678558,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.5, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678559,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,261,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678559,,,train,sda-all,samples/GSE284137/GSM8678559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.55, ""life_stage"": 0.64}",uberon,low_confidence_annotation
GSM8678560,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,174,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678560,,,train,sda-all,samples/GSE284137/GSM8678560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8300000000000001, ""life_stage"": 0.9500000000000001}",,
GSM8678561,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,222,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678561,,,train,sda-all,samples/GSE284137/GSM8678561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.88, ""life_stage"": 0.79}",,
GSM8678562,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,326,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678562,,,train,sda-all,samples/GSE284137/GSM8678562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.75, ""life_stage"": 0.99}",,
GSM8678563,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,280,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678563,,,train,sda-all,samples/GSE284137/GSM8678563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.75, ""life_stage"": 0.9500000000000001}",,
GSM8678564,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,238,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678564,,,train,sda-all,samples/GSE284137/GSM8678564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.73, ""life_stage"": 0.8200000000000001}",,
GSM8678565,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,156,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678565,,,train,sda-all,samples/GSE284137/GSM8678565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.46, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8678566,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,243,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678566,,,train,sda-all,samples/GSE284137/GSM8678566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.92, ""life_stage"": 0.98}",,
GSM8678567,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,179,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678567,,,train,sda-all,samples/GSE284137/GSM8678567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.79, ""life_stage"": 0.79}",,
GSM8678568,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,186,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,12w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678568,,,train,sda-all,samples/GSE284137/GSM8678568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM8678569,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,385,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678569,,,train,sda-all,samples/GSE284137/GSM8678569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678570,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,304,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678570,,,train,sda-all,samples/GSE284137/GSM8678570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.36, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678571,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,159,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678571,,,train,sda-all,samples/GSE284137/GSM8678571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8678572,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,286,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678572,,,train,sda-all,samples/GSE284137/GSM8678572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.8, ""life_stage"": 0.97}",,
GSM8678573,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,277,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678573,,,train,sda-all,samples/GSE284137/GSM8678573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678574,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,343,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678574,,,train,sda-all,samples/GSE284137/GSM8678574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.47000000000000003, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678575,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,213,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678575,,,train,sda-all,samples/GSE284137/GSM8678575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.88, ""life_stage"": 0.98}",,
GSM8678576,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,186,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678576,,,train,sda-all,samples/GSE284137/GSM8678576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678577,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,128,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678577,,,train,sda-all,samples/GSE284137/GSM8678577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8678578,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,179,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678578,,,train,sda-all,samples/GSE284137/GSM8678578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM8678579,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,317,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678579,,,train,sda-all,samples/GSE284137/GSM8678579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM8678580,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,261,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678580,,,train,sda-all,samples/GSE284137/GSM8678580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.52, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678581,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,173,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678581,,,train,sda-all,samples/GSE284137/GSM8678581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8678582,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,149,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678582,,,train,sda-all,samples/GSE284137/GSM8678582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8678583,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,160,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678583,,,train,sda-all,samples/GSE284137/GSM8678583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM8678584,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,186,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,6w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678584,,,train,sda-all,samples/GSE284137/GSM8678584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.87, ""life_stage"": 0.99}",,
GSM8678585,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,134,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678585,,,train,sda-all,samples/GSE284137/GSM8678585,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8678586,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,151,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678586,,,train,sda-all,samples/GSE284137/GSM8678586,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM8678587,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,131,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678587,,,train,sda-all,samples/GSE284137/GSM8678587,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678588,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,138,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678588,,,train,sda-all,samples/GSE284137/GSM8678588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.88, ""life_stage"": 0.93}",,
GSM8678589,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,216,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678589,,,train,sda-all,samples/GSE284137/GSM8678589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM8678590,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,154,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678590,,,train,sda-all,samples/GSE284137/GSM8678590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.68, ""life_stage"": 0.9500000000000001}",,
GSM8678591,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,326,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678591,,,train,sda-all,samples/GSE284137/GSM8678591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.45, ""life_stage"": 0.84}",uberon,low_confidence_annotation
GSM8678592,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,332,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678592,,,train,sda-all,samples/GSE284137/GSM8678592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.5700000000000001, ""life_stage"": 0.89}",uberon,low_confidence_annotation
GSM8678593,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,159,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678593,,,train,sda-all,samples/GSE284137/GSM8678593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.79, ""life_stage"": 0.97}",,
GSM8678594,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,129,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678594,,,train,sda-all,samples/GSE284137/GSM8678594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.93, ""life_stage"": 0.88}",,
GSM8678595,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,229,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678595,,,train,sda-all,samples/GSE284137/GSM8678595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.6900000000000001, ""life_stage"": 0.9500000000000001}",,
GSM8678596,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,277,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678596,,,train,sda-all,samples/GSE284137/GSM8678596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.81, ""life_stage"": 0.92}",,
GSM8678597,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,198,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678597,,,train,sda-all,samples/GSE284137/GSM8678597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.76, ""life_stage"": 0.92}",,
GSM8678598,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,223,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678598,,,train,sda-all,samples/GSE284137/GSM8678598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.62, ""life_stage"": 0.66}",,
GSM8678599,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,176,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678599,,,train,sda-all,samples/GSE284137/GSM8678599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.84, ""life_stage"": 0.92}",,
GSM8678600,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,195,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678600,,,train,sda-all,samples/GSE284137/GSM8678600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.8, ""life_stage"": 0.93}",,
GSM8678601,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,229,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678601,,,train,sda-all,samples/GSE284137/GSM8678601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.8200000000000001, ""life_stage"": 0.91}",,
GSM8678602,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,205,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678602,,,train,sda-all,samples/GSE284137/GSM8678602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.79, ""life_stage"": 0.87}",,
GSM8678603,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,253,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678603,,,train,sda-all,samples/GSE284137/GSM8678603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.45, ""life_stage"": 0.79}",uberon,low_confidence_annotation
GSM8678604,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,210,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678604,,,train,sda-all,samples/GSE284137/GSM8678604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.45, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678605,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,132,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678605,,,train,sda-all,samples/GSE284137/GSM8678605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.8300000000000001, ""life_stage"": 0.8}",,
GSM8678606,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,124,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678606,,,train,sda-all,samples/GSE284137/GSM8678606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.91, ""life_stage"": 0.99}",,
GSM8678607,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,132,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678607,,,train,sda-all,samples/GSE284137/GSM8678607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.59, ""life_stage"": 0.91}",uberon,low_confidence_annotation
GSM8678608,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,136,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678608,,,train,sda-all,samples/GSE284137/GSM8678608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.66, ""life_stage"": 0.9500000000000001}",,
GSM8678609,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,187,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678609,,,train,sda-all,samples/GSE284137/GSM8678609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678610,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,181,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678610,,,train,sda-all,samples/GSE284137/GSM8678610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.49, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8678611,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,171,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678611,,,train,sda-all,samples/GSE284137/GSM8678611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.84, ""life_stage"": 0.9400000000000001}",,
GSM8678612,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,164,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678612,,,train,sda-all,samples/GSE284137/GSM8678612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.59, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678613,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,215,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678613,,,train,sda-all,samples/GSE284137/GSM8678613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.6900000000000001, ""life_stage"": 0.9500000000000001}",,
GSM8678614,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,205,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678614,,,train,sda-all,samples/GSE284137/GSM8678614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.77, ""life_stage"": 0.91}",,
GSM8678615,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,208,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678615,,,train,sda-all,samples/GSE284137/GSM8678615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.93, ""life_stage"": 0.92}",,
GSM8678616,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,131,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678616,,,train,sda-all,samples/GSE284137/GSM8678616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.56, ""life_stage"": 0.67}",uberon,low_confidence_annotation
GSM8678617,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,115,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678617,,,train,sda-all,samples/GSE284137/GSM8678617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.54, ""life_stage"": 0.91}",uberon,low_confidence_annotation
GSM8678618,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,203,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678618,,,train,sda-all,samples/GSE284137/GSM8678618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.85, ""life_stage"": 0.89}",,
GSM8678619,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,211,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678619,,,train,sda-all,samples/GSE284137/GSM8678619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.97, ""life_stage"": 0.92}",,
GSM8678620,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,148,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678620,,,train,sda-all,samples/GSE284137/GSM8678620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.41000000000000003, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8678621,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,126,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678621,,,train,sda-all,samples/GSE284137/GSM8678621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678622,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,48,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678622,,,train,sda-all,samples/GSE284137/GSM8678622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8678623,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,80,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678623,,,train,sda-all,samples/GSE284137/GSM8678623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8678624,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,204,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678624,,,train,sda-all,samples/GSE284137/GSM8678624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8678625,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,276,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678625,,,train,sda-all,samples/GSE284137/GSM8678625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.62, ""life_stage"": 0.99}",,
GSM8678626,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,120,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678626,,,train,sda-all,samples/GSE284137/GSM8678626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.47000000000000003, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM8678627,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,131,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678627,,,train,sda-all,samples/GSE284137/GSM8678627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM8678628,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,121,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678628,,,train,sda-all,samples/GSE284137/GSM8678628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.85, ""life_stage"": 0.9500000000000001}",,
GSM8678629,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,114,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678629,,,train,sda-all,samples/GSE284137/GSM8678629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.97, ""life_stage"": 0.97}",,
GSM8678630,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,79,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678630,,,train,sda-all,samples/GSE284137/GSM8678630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.76, ""life_stage"": 0.98}",,
GSM8678631,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,90,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678631,,,train,sda-all,samples/GSE284137/GSM8678631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM8678632,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,172,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678632,,,train,sda-all,samples/GSE284137/GSM8678632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.47000000000000003, ""life_stage"": 0.91}",uberon,low_confidence_annotation
GSM8678633,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,113,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678633,,,train,sda-all,samples/GSE284137/GSM8678633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8678634,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,82,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678634,,,train,sda-all,samples/GSE284137/GSM8678634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8678635,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,100,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678635,,,train,sda-all,samples/GSE284137/GSM8678635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.91, ""life_stage"": 0.97}",,
GSM8678636,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,59,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678636,,,train,sda-all,samples/GSE284137/GSM8678636,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM8678637,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,81,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,6w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678637,,,train,sda-all,samples/GSE284137/GSM8678637,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM8678638,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,203,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678638,,,train,sda-all,samples/GSE284137/GSM8678638,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.56, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8678639,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,137,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678639,,,train,sda-all,samples/GSE284137/GSM8678639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.61, ""life_stage"": 0.85}",,
GSM8678640,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,149,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678640,,,train,sda-all,samples/GSE284137/GSM8678640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.81, ""life_stage"": 0.79}",,
GSM8678641,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,110,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678641,,,train,sda-all,samples/GSE284137/GSM8678641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.89, ""life_stage"": 0.91}",,
GSM8678642,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,143,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678642,,,train,sda-all,samples/GSE284137/GSM8678642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.73, ""life_stage"": 0.9500000000000001}",,
GSM8678643,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,219,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678643,,,train,sda-all,samples/GSE284137/GSM8678643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.68, ""life_stage"": 0.84}",,
GSM8678644,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,143,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678644,,,train,sda-all,samples/GSE284137/GSM8678644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.46, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8678645,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,187,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678645,,,train,sda-all,samples/GSE284137/GSM8678645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6000000000000001, ""life_stage"": 0.6900000000000001}",,
GSM8678646,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,156,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678646,,,train,sda-all,samples/GSE284137/GSM8678646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.88, ""life_stage"": 0.79}",,
GSM8678647,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,157,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678647,,,train,sda-all,samples/GSE284137/GSM8678647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.9500000000000001, ""life_stage"": 0.9400000000000001}",,
GSM8678648,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,106,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678648,,,train,sda-all,samples/GSE284137/GSM8678648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.75, ""life_stage"": 0.93}",,
GSM8678649,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,111,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678649,,,train,sda-all,samples/GSE284137/GSM8678649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.7000000000000001, ""life_stage"": 0.81}",,
GSM8678650,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,244,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678650,,,train,sda-all,samples/GSE284137/GSM8678650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8678651,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,180,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678651,,,train,sda-all,samples/GSE284137/GSM8678651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.4, ""life_stage"": 0.87}",uberon,low_confidence_annotation
GSM8678652,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,86,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678652,,,train,sda-all,samples/GSE284137/GSM8678652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.77, ""life_stage"": 0.6900000000000001}",,
GSM8678653,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,263,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678653,,,train,sda-all,samples/GSE284137/GSM8678653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.68, ""life_stage"": 0.9400000000000001}",,
GSM8678654,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,female,ST (legacy),ST (legacy),False,,219,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,juvenile,4w,extracted field,female,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678654,,,train,sda-all,samples/GSE284137/GSM8678654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.76, ""life_stage"": 0.9400000000000001}",,
GSM8678655,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,347,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678655,,,train,sda-all,samples/GSE284137/GSM8678655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8678656,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,257,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678656,,,train,sda-all,samples/GSE284137/GSM8678656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.43, ""life_stage"": 0.67}",uberon,low_confidence_annotation
GSM8678657,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,82,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678657,,,train,sda-all,samples/GSE284137/GSM8678657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.8300000000000001, ""life_stage"": 0.89}",,
GSM8678658,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,106,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678658,,,train,sda-all,samples/GSE284137/GSM8678658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.81, ""life_stage"": 0.93}",,
GSM8678659,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,255,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678659,,,train,sda-all,samples/GSE284137/GSM8678659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.73, ""life_stage"": 0.92}",,
GSM8678660,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,92,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,8w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678660,,,train,sda-all,samples/GSE284137/GSM8678660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.77, ""life_stage"": 0.93}",,
GSM8678661,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,283,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678661,,,train,sda-all,samples/GSE284137/GSM8678661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.61, ""life_stage"": 0.85}",,
GSM8678662,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,242,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678662,,,train,sda-all,samples/GSE284137/GSM8678662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.81, ""life_stage"": 0.87}",,
GSM8678663,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,129,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678663,,,train,sda-all,samples/GSE284137/GSM8678663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.52, ""life_stage"": 0.8200000000000001}",uberon,low_confidence_annotation
GSM8678664,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,177,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678664,,,train,sda-all,samples/GSE284137/GSM8678664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM8678665,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,160,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678665,,,train,sda-all,samples/GSE284137/GSM8678665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.89, ""life_stage"": 0.9400000000000001}",,
GSM8678666,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,151,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M1,M1,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678666,,,train,sda-all,samples/GSE284137/GSM8678666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.96, ""life_stage"": 0.89}",,
GSM8678667,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,278,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678667,,,train,sda-all,samples/GSE284137/GSM8678667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.84, ""life_stage"": 0.98}",,
GSM8678668,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,154,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678668,,,train,sda-all,samples/GSE284137/GSM8678668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.7000000000000001, ""life_stage"": 0.97}",,
GSM8678669,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,212,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678669,,,train,sda-all,samples/GSE284137/GSM8678669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.43, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8678670,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,176,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678670,,,train,sda-all,samples/GSE284137/GSM8678670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.5, ""life_stage"": 0.78}",uberon,low_confidence_annotation
GSM8678671,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,128,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678671,,,train,sda-all,samples/GSE284137/GSM8678671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8, ""life_stage"": 0.97}",,
GSM8678672,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,171,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678672,,,train,sda-all,samples/GSE284137/GSM8678672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.92, ""life_stage"": 0.84}",,
GSM8678673,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,367,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678673,,,train,sda-all,samples/GSE284137/GSM8678673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.84, ""life_stage"": 0.91}",,
GSM8678674,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,294,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678674,,,train,sda-all,samples/GSE284137/GSM8678674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.71, ""life_stage"": 0.91}",,
GSM8678675,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,150,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678675,,,train,sda-all,samples/GSE284137/GSM8678675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.41000000000000003, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM8678676,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,179,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678676,,,train,sda-all,samples/GSE284137/GSM8678676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.41000000000000003, ""life_stage"": 0.5700000000000001}",uberon;life_stage,low_confidence_annotation
GSM8678677,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,138,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678677,,,train,sda-all,samples/GSE284137/GSM8678677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.79, ""life_stage"": 0.9400000000000001}",,
GSM8678678,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,163,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M5,M5,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678678,,,train,sda-all,samples/GSE284137/GSM8678678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.8300000000000001, ""life_stage"": 0.97}",,
GSM8678679,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,245,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678679,,,train,sda-all,samples/GSE284137/GSM8678679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.81, ""life_stage"": 0.86}",,
GSM8678680,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,149,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678680,,,train,sda-all,samples/GSE284137/GSM8678680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.44, ""life_stage"": 0.66}",uberon,low_confidence_annotation
GSM8678681,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,156,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678681,,,train,sda-all,samples/GSE284137/GSM8678681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.49, ""life_stage"": 0.74}",uberon,low_confidence_annotation
GSM8678682,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,ST (legacy),ST (legacy),False,,175,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,F,age rule: age with unit,adult,8w,extracted field,female,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678682,,,train,sda-all,samples/GSE284137/GSM8678682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.9500000000000001, ""life_stage"": 0.86}",,
GSM8678683,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,216,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678683,,,train,sda-all,samples/GSE284137/GSM8678683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.43, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM8678684,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,207,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678684,,,train,sda-all,samples/GSE284137/GSM8678684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.5700000000000001, ""life_stage"": 0.91}",uberon,low_confidence_annotation
GSM8678685,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,144,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678685,,,train,sda-all,samples/GSE284137/GSM8678685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.87, ""life_stage"": 0.9500000000000001}",,
GSM8678686,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,133,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678686,,,train,sda-all,samples/GSE284137/GSM8678686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.85, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM8678687,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,197,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M4,M4,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678687,,,train,sda-all,samples/GSE284137/GSM8678687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.8200000000000001, ""life_stage"": 0.91}",,
GSM8678688,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,236,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678688,,,train,sda-all,samples/GSE284137/GSM8678688,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.55, ""life_stage"": 0.93}",uberon,low_confidence_annotation
GSM8678689,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,256,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678689,,,train,sda-all,samples/GSE284137/GSM8678689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.85, ""life_stage"": 0.9500000000000001}",,
GSM8678690,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,112,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678690,,,train,sda-all,samples/GSE284137/GSM8678690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.79, ""life_stage"": 0.71}",,
GSM8678691,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,130,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678691,,,train,sda-all,samples/GSE284137/GSM8678691,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.87, ""life_stage"": 0.88}",,
GSM8678692,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,135,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678692,,,train,sda-all,samples/GSE284137/GSM8678692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.8, ""life_stage"": 0.97}",,
GSM8678693,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,ST (legacy),ST (legacy),False,,157,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,adult,12w,extracted field,male,GSE284137:M2,M2,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678693,,,train,sda-all,samples/GSE284137/GSM8678693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM8678694,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,135,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678694,,,train,sda-all,samples/GSE284137/GSM8678694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.52, ""life_stage"": 0.5700000000000001}",uberon;life_stage,low_confidence_annotation
GSM8678695,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,92,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678695,,,train,sda-all,samples/GSE284137/GSM8678695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.44, ""life_stage"": 0.93}",uberon,low_confidence_annotation
GSM8678696,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,184,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678696,,,train,sda-all,samples/GSE284137/GSM8678696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.75, ""life_stage"": 0.99}",,
GSM8678697,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,232,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Middle colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678697,,,train,sda-all,samples/GSE284137/GSM8678697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.8300000000000001, ""life_stage"": 0.85}",,
GSM8678698,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,42,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678698,,,train,sda-all,samples/GSE284137/GSM8678698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.75, ""life_stage"": 0.89}",,
GSM8678699,colon,normal,,colon,primary tissue,Mus musculus,house mouse,juvenile,male,ST (legacy),ST (legacy),False,,92,Tissue and cellular spatiotemporal dynamics in colon aging,GSE284137,GSE284137,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal colon,,luna,,M,age rule: age with unit,juvenile,4w,extracted field,male,GSE284137:M3,M3,fresh frozen,OCT,release v3,sequencing-based,spatial transcriptomics,,,spot,12976,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,41125832,,GSM8678699,,,train,sda-all,samples/GSE284137/GSM8678699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.76, ""life_stage"": 0.89}",,
GSM8682763,lung,disease,asthma,lung,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,119419,Comprehensive sequencing of the lung neuroimmune landscape in response to asthmatic induction,GSE284353,GSE284353,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0004979,luna,,,luna,adult,Adult,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,mMulti_91g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999917159109737,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40181989,,GSM8682763,,,train,sda-all,samples/GSE284353/GSM8682763,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8682764,head and neck,disease,asthma,vagus X ganglion,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,3344,Comprehensive sequencing of the lung neuroimmune landscape in response to asthmatic induction,GSE284353,GSE284353,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0005362,Vagal Ganglia,MONDO:0004979,luna,,,luna,adult,Adult,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,mMulti_91g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999896935550365,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40181989,,GSM8682764,,,train,sda-all,samples/GSE284353/GSM8682764,sda-tissue-disease-2.5,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8682765,head and neck,disease,asthma,vagus X ganglion,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,2791,Comprehensive sequencing of the lung neuroimmune landscape in response to asthmatic induction,GSE284353,GSE284353,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0005362,Vagal Ganglia,MONDO:0004979,luna,,,luna,adult,Adult,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,mMulti_91g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000154469312097,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40181989,,GSM8682765,,,train,sda-all,samples/GSE284353/GSM8682765,sda-tissue-disease-2.5,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8682766,head and neck,disease,asthma,vagus X ganglion,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,3959,Comprehensive sequencing of the lung neuroimmune landscape in response to asthmatic induction,GSE284353,GSE284353,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0005362,Vagal Ganglia,MONDO:0004979,luna,,,luna,adult,Adult,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,mMulti_91g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000343218012081,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40181989,,GSM8682766,,,train,sda-all,samples/GSE284353/GSM8682766,sda-tissue-disease-2.5,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8686962,prostate,normal,,prostate gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2690,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],GSE284571,GSE284571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Intact,age rule: age with unit,not stated,10–18 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.7622853422886635,platform_constant,4.7622853422886635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686962,,,train,hesrt,samples/GSE284571/GSM8686962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8686963,prostate,normal,,prostate gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2433,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],GSE284571,GSE284571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Intact,age rule: age with unit,not stated,10–18 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.898061586657095,platform_constant,4.898061586657095,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686963,,,train,hesrt,samples/GSE284571/GSM8686963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8686964,prostate,normal,,prostate gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2668,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],GSE284571,GSE284571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Intact,age rule: age with unit,not stated,10–18 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.781811593608017,platform_constant,4.781811593608017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686964,,,train,hesrt,samples/GSE284571/GSM8686964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8686965,prostate,normal,,prostate gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2770,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],GSE284571,GSE284571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Intact,age rule: age with unit,not stated,10–18 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.748223514450942,platform_constant,4.748223514450942,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686965,,,train,hesrt,samples/GSE284571/GSM8686965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8686966,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2339,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],GSE284571,GSE284571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castrated D15,age rule: age with unit,not stated,10–18 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.871778922215267,platform_constant,4.871778922215267,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686966,,,train,hesrt,samples/GSE284571/GSM8686966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8686967,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2486,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],GSE284571,GSE284571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castrated D15,age rule: age with unit,not stated,10–18 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.859361769647027,platform_constant,4.859361769647027,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686967,,,train,hesrt,samples/GSE284571/GSM8686967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.97, ""life_stage"": 0.98}",,
GSM8686968,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2481,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],GSE284571,GSE284571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castrated D15,age rule: age with unit,not stated,10–18 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.88098459243642,platform_constant,4.88098459243642,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686968,,,train,hesrt,samples/GSE284571/GSM8686968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8686969,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2650,Cellular cartography reveals mouse prostate organization and determinants of castration resistance [Spatial Transcriptomics],GSE284571,GSE284571,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castrated D15,age rule: age with unit,not stated,10–18 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.898209311394992,platform_constant,4.898209311394992,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39763898;40974890,,GSM8686969,,,train,hesrt,samples/GSE284571/GSM8686969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8689371,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2807,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.50249845831465,platform_constant,4.50249845831465,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689371,,,train,hesrt,samples/GSE284625/GSM8689371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689372,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3436,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.23247652628068,platform_constant,4.23247652628068,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689372,,,train,hesrt,samples/GSE284625/GSM8689372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689373,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2874,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.231835348076849,platform_constant,4.231835348076849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689373,,,train,hesrt,samples/GSE284625/GSM8689373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689374,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2648,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.507308569759761,platform_constant,4.507308569759761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689374,,,train,hesrt,samples/GSE284625/GSM8689374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689375,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3575,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.529032335963865,platform_constant,4.529032335963865,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689375,,,train,hesrt,samples/GSE284625/GSM8689375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689376,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2945,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.230552458096319,platform_constant,4.230552458096319,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689376,,,train,hesrt,samples/GSE284625/GSM8689376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689377,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3079,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.13242127772878,platform_constant,4.13242127772878,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689377,,,train,hesrt,samples/GSE284625/GSM8689377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689378,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3058,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.2292697879455625,platform_constant,4.2292697879455625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689378,,,train,hesrt,samples/GSE284625/GSM8689378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689379,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3300,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.23119380584414,platform_constant,4.23119380584414,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689379,,,train,hesrt,samples/GSE284625/GSM8689379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689380,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3197,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.224459320734984,platform_constant,4.224459320734984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689380,,,train,hesrt,samples/GSE284625/GSM8689380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8689381,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2944,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.505063922872432,platform_constant,4.505063922872432,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689381,,,train,hesrt,samples/GSE284625/GSM8689381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689382,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2528,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.230873107665126,platform_constant,4.230873107665126,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689382,,,train,hesrt,samples/GSE284625/GSM8689382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689383,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3342,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.497688194201268,platform_constant,4.497688194201268,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689383,,,train,hesrt,samples/GSE284625/GSM8689383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689384,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2824,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.230873107665134,platform_constant,4.230873107665134,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689384,,,train,hesrt,samples/GSE284625/GSM8689384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689385,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3133,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.501857232667193,platform_constant,4.501857232667193,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689385,,,train,hesrt,samples/GSE284625/GSM8689385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689386,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3665,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.23247652628068,platform_constant,4.23247652628068,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689386,,,train,hesrt,samples/GSE284625/GSM8689386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689387,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3264,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.231193805844131,platform_constant,4.231193805844131,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689387,,,train,hesrt,samples/GSE284625/GSM8689387,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689388,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3211,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.2305524580963,platform_constant,4.2305524580963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689388,,,train,hesrt,samples/GSE284625/GSM8689388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689389,brain,not stated,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3943,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.229911025782339,platform_constant,4.229911025782339,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689389,,,train,hesrt,samples/GSE284625/GSM8689389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689390,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4173,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.230873107665135,platform_constant,4.230873107665135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689390,,,train,hesrt,samples/GSE284625/GSM8689390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689391,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3199,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.131459267345747,platform_constant,4.131459267345747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689391,,,train,hesrt,samples/GSE284625/GSM8689391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689392,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2478,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.222856130949868,platform_constant,4.222856130949868,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689392,,,train,hesrt,samples/GSE284625/GSM8689392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689393,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3522,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.2315145526443425,platform_constant,4.2315145526443425,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689393,,,train,hesrt,samples/GSE284625/GSM8689393,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689394,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3281,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.503460481254349,platform_constant,4.503460481254349,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689394,,,train,hesrt,samples/GSE284625/GSM8689394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689395,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2841,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.231835348076849,platform_constant,4.231835348076849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689395,,,train,hesrt,samples/GSE284625/GSM8689395,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8689396,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2852,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.231514552644333,platform_constant,4.231514552644333,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689396,,,train,hesrt,samples/GSE284625/GSM8689396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689397,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3571,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.254104955297489,platform_constant,4.254104955297489,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689397,,,train,hesrt,samples/GSE284625/GSM8689397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689398,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3369,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.501215557844026,platform_constant,4.501215557844026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689398,,,train,hesrt,samples/GSE284625/GSM8689398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689399,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2977,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.494459064618844,platform_constant,4.494459064618844,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689399,,,train,hesrt,samples/GSE284625/GSM8689399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689400,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3555,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.508240503235703,platform_constant,4.508240503235703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689400,,,train,hesrt,samples/GSE284625/GSM8689400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689401,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3167,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.50151009112251,platform_constant,4.50151009112251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689401,,,train,hesrt,samples/GSE284625/GSM8689401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.12, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8689402,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3153,spatial transcriptomics of mouse brain before and after activation,GSE284625,GSE284625,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,mouse brain,,luna,,activated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32293,counts,pixel,4.228118107939417,platform_constant,4.228118107939417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42000729,,GSM8689402,,,train,hesrt,samples/GSE284625/GSM8689402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8690706,pancreas,disease,malignant pancreatic neoplasm;overnutrition,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3414,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],GSE284695,GSE284695,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,luna,UBERON:0001264,Pancreatic tumor tissue,MONDO:0009831;MONDO:0003916,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.924391863739493,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690706,,,train,sda-all,samples/GSE284695/GSM8690706,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8690707,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4444,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],GSE284695,GSE284695,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,luna,UBERON:0001264,Pancreatic tumor tissue,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.917383513764577,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690707,,,train,sda-all,samples/GSE284695/GSM8690707,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8690708,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2417,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],GSE284695,GSE284695,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,luna,UBERON:0001264,Pancreatic tumor tissue,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.937814258220533,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690708,,,train,sda-all,samples/GSE284695/GSM8690708,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8690709,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2790,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],GSE284695,GSE284695,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,luna,UBERON:0001264,Pancreatic tumor tissue,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.94355370601887,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690709,,,train,sda-all,samples/GSE284695/GSM8690709,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8690710,pancreas,disease,malignant pancreatic neoplasm;obesity disorder,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3766,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],GSE284695,GSE284695,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,luna,UBERON:0001264,Pancreatic tumor tissue,MONDO:0009831;MONDO:0011122,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.946659998047559,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690710,,,train,sda-all,samples/GSE284695/GSM8690710,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8690711,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3762,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],GSE284695,GSE284695,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,luna,UBERON:0001264,Pancreatic tumor tissue,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.903678896909104,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690711,,,train,sda-all,samples/GSE284695/GSM8690711,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8690712,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3350,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],GSE284695,GSE284695,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,luna,UBERON:0001264,Pancreatic tumor tissue,MONDO:0009831,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.903572378115411,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690712,,,train,sda-all,samples/GSE284695/GSM8690712,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8690713,pancreas,disease,malignant pancreatic neoplasm;overnutrition,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1874,Obesity-mediated intratumoral innervation increases pancreatic cancer tumorigenesis [Spatial Transcriptomics],GSE284695,GSE284695,10090,Mus musculus,10090,,False,False,GEO organism is the genus 'Mus'; features are ENSMUSG gene IDs,Mus,Mus musculus,luna,UBERON:0001264,Pancreatic tumor tissue,MONDO:0009831;MONDO:0003916,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.969982816649087,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8690713,,,train,sda-all,samples/GSE284695/GSM8690713,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8691718,small intestine,disease,infectious disease,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,219239,The XCL1-XCR1 axis supports intestinal tissue residency and anti-tumor immunity,GSE284741,GSE284741,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002108,Small Intestine,MONDO:0005550,luna,,LCMV infection and P14 CD8 T cell transfer. 500 ng/mouse of DT was administered by intraperitoneal injection days 4-7 after infection.,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,350,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,,VERIFIED,,,,39841133,,GSM8691718,,,train,sda-all,samples/GSE284741/GSM8691718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8691759,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,51820,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE284747,GSE284747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,7280,counts,um,1.0,verified,0.5000206334468172,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691759,,,train,sda-all,samples/GSE284747/GSM8691759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691760,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55811,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE284747,GSE284747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,7025,counts,um,1.0,verified,0.5000011474205984,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691760,,,train,sda-all,samples/GSE284747/GSM8691760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691761,lung,disease,acute myeloid leukemia;lung disorder,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,96419,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE284747,GSE284747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0018874;MONDO:0005275,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,8261,counts,um,1.0,verified,0.49999060644773424,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691761,,,train,sda-all,samples/GSE284747/GSM8691761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691762,lung,disease,acute myeloid leukemia;lung disorder,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,64442,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE284747,GSE284747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0018874;MONDO:0005275,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,6929,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691762,,,train,sda-all,samples/GSE284747/GSM8691762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691763,lung,disease,acute myeloid leukemia,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,26713,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE284747,GSE284747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0018874,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,6227,counts,um,1.0,verified,0.5000041118421052,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691763,,,train,sda-all,samples/GSE284747/GSM8691763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691764,lung,disease,acute myeloid leukemia,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,211889,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE284747,GSE284747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0018874,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,8082,counts,um,1.0,verified,0.49999871040957383,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691764,,,train,sda-all,samples/GSE284747/GSM8691764,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691765,lung,disease,acute myeloid leukemia;lung disorder,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,80583,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE284747,GSE284747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0018874;MONDO:0005275,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,6377,counts,um,1.0,verified,0.4999823217442545,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691765,,,train,sda-all,samples/GSE284747/GSM8691765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8691766,lung,disease,acute myeloid leukemia;lung disorder,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,105123,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE284747,GSE284747,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0018874;MONDO:0005275,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,6675,counts,um,1.0,verified,0.4999844870380585,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8691766,,,train,sda-all,samples/GSE284747/GSM8691766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8694491,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3258,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.984330669085371,platform_constant,3.984330669085371,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694491,,,train,hesrt,samples/GSE284989/GSM8694491,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8694492,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2614,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.9946842996568295,platform_constant,3.9946842996568295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694492,,,train,hesrt,samples/GSE284989/GSM8694492,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8694493,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2604,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,4.062518690480048,platform_constant,4.062518690480048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694493,,,train,hesrt,samples/GSE284989/GSM8694493,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694494,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2465,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.942392489032408,platform_constant,3.942392489032408,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694494,,,train,hesrt,samples/GSE284989/GSM8694494,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8694495,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2535,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,4.030366853653612,platform_constant,4.030366853653612,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694495,,,train,hesrt,samples/GSE284989/GSM8694495,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8694496,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1978,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.984457031277133,platform_constant,3.984457031277133,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694496,,,train,hesrt,samples/GSE284989/GSM8694496,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694497,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2593,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,4.088594601140091,platform_constant,4.088594601140091,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694497,,,train,hesrt,samples/GSE284989/GSM8694497,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8694498,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3241,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.9248614481619994,platform_constant,3.9248614481619994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694498,,,train,hesrt,samples/GSE284989/GSM8694498,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694499,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2918,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.940113919699788,platform_constant,3.940113919699788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694499,,,train,hesrt,samples/GSE284989/GSM8694499,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694500,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2435,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,4.046199298899556,platform_constant,4.046199298899556,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694500,,,train,hesrt,samples/GSE284989/GSM8694500,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694501,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3211,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,4.024355806277597,platform_constant,4.024355806277597,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694501,,,train,hesrt,samples/GSE284989/GSM8694501,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694502,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3484,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,4.035719409050836,platform_constant,4.035719409050836,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694502,,,train,hesrt,samples/GSE284989/GSM8694502,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694503,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1772,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.9294809489670706,platform_constant,3.9294809489670706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694503,,,train,hesrt,samples/GSE284989/GSM8694503,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694504,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2590,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.9294809489670706,platform_constant,3.9294809489670706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694504,,,train,hesrt,samples/GSE284989/GSM8694504,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694505,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3815,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.946962314984007,platform_constant,3.946962314984007,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694505,,,train,hesrt,samples/GSE284989/GSM8694505,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694506,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3530,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.9091139787625853,platform_constant,3.9091139787625853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694506,,,train,hesrt,samples/GSE284989/GSM8694506,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694507,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2527,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,4.3200619456568665,platform_constant,4.3200619456568665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694507,,,train,hesrt,samples/GSE284989/GSM8694507,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694508,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1818,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.9294809489670706,platform_constant,3.9294809489670706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694508,,,train,hesrt,samples/GSE284989/GSM8694508,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.89, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694509,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1980,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.9416454682017052,platform_constant,3.9416454682017052,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694509,,,train,hesrt,samples/GSE284989/GSM8694509,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694510,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1947,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.925303821185173,platform_constant,3.925303821185173,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694510,,,train,hesrt,samples/GSE284989/GSM8694510,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694511,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2965,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,aPD-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,3.9506199424562256,platform_constant,3.9506199424562256,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694511,,,train,hesrt,samples/GSE284989/GSM8694511,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8694512,other,disease,colorectal carcinoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2007,Spatial genomics reveals cholesterol metabolism as a key factor in immunotherapy resistance in colorectal cancer [Visium],GSE284989,GSE284989,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,MC38 Tumor,MONDO:0024331,luna,,IgG Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,20551,counts,pixel,4.025618747283734,platform_constant,4.025618747283734,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40171265,,GSM8694512,,,train,hesrt,samples/GSE284989/GSM8694512,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8695241,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,301143,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Virgin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000051637651225,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695241,,,train,sda-all,samples/GSE285027/GSM8695241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8695242,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,270642,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Pregnant (day 7),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000073807274446,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695242,,,train,sda-all,samples/GSE285027/GSM8695242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8695243,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,422058,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Lactating (day 7),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000017227122381,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695243,,,train,sda-all,samples/GSE285027/GSM8695243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM8695244,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,154693,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Virgin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000128945739634,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695244,,,train,sda-all,samples/GSE285027/GSM8695244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8695245,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,290140,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Pregnant (day 7),luna,adult,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.499992892220212,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695245,,,train,sda-all,samples/GSE285027/GSM8695245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM8695246,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,321746,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Lactating (day 7),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999976217656013,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695246,,,train,sda-all,samples/GSE285027/GSM8695246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM8695247,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,180241,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Virgin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49999914018434444,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695247,,,train,sda-all,samples/GSE285027/GSM8695247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8695248,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,239458,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Pregnant (day 7),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000055718288335,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695248,,,train,sda-all,samples/GSE285027/GSM8695248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM8695249,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,390141,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Lactating (day 7),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999948328424534,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695249,,,train,sda-all,samples/GSE285027/GSM8695249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM8695250,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,252319,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Virgin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000103092783506,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695250,,,train,sda-all,samples/GSE285027/GSM8695250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8695251,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,362363,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Pregnant (day 7),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000140035377358,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695251,,,train,sda-all,samples/GSE285027/GSM8695251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM8695252,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,396158,Growth of the maternal intestine during pregnancy and lactation [Xenium],GSE285027,GSE285027,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,,luna,,Lactating (day 7),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_300g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999948282995449,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40112802,,GSM8695252,,,train,sda-all,samples/GSE285027/GSM8695252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM9461743,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,73790,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,GSE285158,GSE285158,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,luna,UBERON:0000955,Brain,,luna,,GFP,luna,not stated,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999828641930177,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461743,,,train,sda-all,samples/GSE285158/GSM9461743,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9461744,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,53044,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,GSE285158,GSE285158,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,luna,UBERON:0000955,Brain,,luna,,GFP,luna,not stated,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999828375286041,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461744,,,train,sda-all,samples/GSE285158/GSM9461744,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9461745,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,66634,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,GSE285158,GSE285158,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,luna,UBERON:0000955,Brain,,luna,,WT,luna,not stated,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999844797616091,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461745,,,train,sda-all,samples/GSE285158/GSM9461745,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.37, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9461746,brain,normal,,brain,xenograft,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,66479,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,GSE285158,GSE285158,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,luna,UBERON:0000955,Brain,,luna,,WT,luna,not stated,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999794219864643,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461746,,,train,sda-all,samples/GSE285158/GSM9461746,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind;disease_status,low_confidence_annotation
GSM9461747,brain,normal,,brain,xenograft,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,66278,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,GSE285158,GSE285158,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,luna,UBERON:0000955,Brain,,luna,,WT,luna,not stated,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999828641930177,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461747,,,train,sda-all,samples/GSE285158/GSM9461747,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.17, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9461748,brain,perturbation,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,61022,Charting the transition from in vitro production through in vivo diversification of human glial progenitor cells,GSE285158,GSE285158,9606,Homo sapiens;Mus musculus,9606;10090,,False,True,GEO organism field,"Homo sapiens
Mus musculus",Homo sapiens,luna,UBERON:0000955,Brain,,luna,,WT,luna,not stated,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999862800695143,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42026046,,GSM9461748,,,train,sda-all,samples/GSE285158/GSM9461748,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.42, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM8698703,skeletal muscle,disease,adult dermatomyositis,skeletal muscle tissue,primary tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,1867,Deciphering Spatial Transcriptomic Signatures Reveals Insights into Perifascicular Atrophy in Dermatomyositis,GSE285226,GSE285226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001134,Frozen Muscle section,MONDO:0001907,luna,Adult Dermatomyositis,Adult Dermatomyositis,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.41755709153132,platform_constant,4.41755709153132,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8698703,,,test,hesrt,samples/GSE285226/GSM8698703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 0.73}",,
GSM8698704,skeletal muscle,disease,juvenile dermatomyositis,skeletal muscle tissue,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E,1455,Deciphering Spatial Transcriptomic Signatures Reveals Insights into Perifascicular Atrophy in Dermatomyositis,GSE285226,GSE285226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001134,Frozen Muscle section,MONDO:0008054,luna,Juvenile Dermatomyositis,Juvenile Dermatomyositis,luna,juvenile,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.444469026541841,platform_constant,4.444469026541841,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8698704,,,test,hesrt,samples/GSE285226/GSM8698704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8699165,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2899,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,GSE285246,GSE285246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,IPF lung,MONDO:0800504,luna,idiopathic pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.425559461139497,platform_constant,4.425559461139497,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699165,,,test,hesrt,samples/GSE285246/GSM8699165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699166,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3642,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,GSE285246,GSE285246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,IPF lung,MONDO:0800504,luna,idiopathic pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.8754077935766125,platform_constant,4.8754077935766125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699166,,,test,hesrt,samples/GSE285246/GSM8699166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699167,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2160,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,GSE285246,GSE285246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,IPF lung,MONDO:0800504,luna,idiopathic pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.805966961773025,platform_constant,4.805966961773025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699167,,,test,hesrt,samples/GSE285246/GSM8699167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699168,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1982,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,GSE285246,GSE285246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,IPF lung,MONDO:0800504,luna,idiopathic pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.8078755095431625,platform_constant,4.8078755095431625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699168,,,test,hesrt,samples/GSE285246/GSM8699168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699169,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1452,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,GSE285246,GSE285246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,IPF lung,MONDO:0800504,luna,idiopathic pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.807111908562414,platform_constant,4.807111908562414,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699169,,,test,hesrt,samples/GSE285246/GSM8699169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699170,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2413,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,GSE285246,GSE285246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,IPF lung,MONDO:0800504,luna,idiopathic pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.805966961773025,platform_constant,4.805966961773025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699170,,,test,hesrt,samples/GSE285246/GSM8699170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699171,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2386,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,GSE285246,GSE285246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,IPF lung,MONDO:0800504,luna,idiopathic pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.8078755095431625,platform_constant,4.8078755095431625,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699171,,,test,hesrt,samples/GSE285246/GSM8699171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8699172,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2459,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,GSE285246,GSE285246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,IPF lung,MONDO:0800504,luna,idiopathic pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.806729896343027,platform_constant,4.806729896343027,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699172,,,test,hesrt,samples/GSE285246/GSM8699172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8699173,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2130,Spatially resolved atlas of IPF fibroblastic foci identifies that PAK2 kinase activation is involved in fibrogenesis,GSE285246,GSE285246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,IPF lung,MONDO:0800504,luna,idiopathic pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.806729896343027,platform_constant,4.806729896343027,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40675771,,GSM8699173,,,test,hesrt,samples/GSE285246/GSM8699173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8700484,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,m6A-ARTR-DBiT,False,,1926,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],GSE285304,GSE285304,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Embryo E11,,luna,,m6A-ARTR-DBiT protocol,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,m6A-ARTR-DBiT,,,spot,15921,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM8700484,,,train,sda-all,samples/GSE285304/GSM8700484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8700485,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,m6A-ARTR-DBiT,False,,2004,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],GSE285304,GSE285304,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Embryo E11,,luna,,m6A-ARTR-DBiT protocol,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,m6A-ARTR-DBiT,,,spot,16527,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM8700485,,,train,sda-all,samples/GSE285304/GSM8700485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8700486,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,m6A-ARTR-DBiT,False,,2363,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],GSE285304,GSE285304,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,m6A-ARTR-DBiT protocol,luna,not stated,,not stated,,,,,,release v3,sequencing-based,m6A-ARTR-DBiT,,,spot,15834,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM8700486,,,train,sda-all,samples/GSE285304/GSM8700486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8700487,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,m6A-ARTR-DBiT,False,,2401,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],GSE285304,GSE285304,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,m6A-ARTR-DBiT protocol,luna,not stated,,not stated,,,,,,release v3,sequencing-based,m6A-ARTR-DBiT,,,spot,15862,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM8700487,,,train,sda-all,samples/GSE285304/GSM8700487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8700488,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,m6A-ARTR-DBiT,False,,2500,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],GSE285304,GSE285304,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,m6A-ARTR-DBiT protocol,luna,not stated,,not stated,,,,,,release v3,sequencing-based,m6A-ARTR-DBiT,,,spot,15178,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM8700488,,,train,sda-all,samples/GSE285304/GSM8700488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9438232,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1776,Spatially resolved m6A profiling using m6A-ARTR-DBiT [spatial],GSE285304,GSE285304,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000922,Embryo E11,,luna,,DBiT-seq protocol,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,DBiT-seq,,,spot,17021,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42265211,,GSM9438232,,,train,sda-all,samples/GSE285304/GSM9438232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8701050,other,disease,lung neoplasm;cancer,,xenograft,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,198792,DDX54 downregulation enhances anti-PD1 therapy in immune-desert lung tumors with high tumor mutational burden,GSE285341,GSE285341,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,LLC1 cancer tissue in syngeneic mouse model,MONDO:0021117;MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,13780,counts,um,1.0,verified,0.49998805884600683,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,40172969,,GSM8701050,,,train,sda-all,samples/GSE285341/GSM8701050,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8701051,other,disease,lung neoplasm;cancer,,xenograft,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,397786,DDX54 downregulation enhances anti-PD1 therapy in immune-desert lung tumors with high tumor mutational burden,GSE285341,GSE285341,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,LLC1 cancer tissue in syngeneic mouse model,MONDO:0021117;MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,13780,counts,um,1.0,verified,0.5000155193819837,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,40172969,,GSM8701051,,,train,sda-all,samples/GSE285341/GSM8701051,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8701052,other,disease,lung neoplasm;cancer,,xenograft,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,342508,DDX54 downregulation enhances anti-PD1 therapy in immune-desert lung tumors with high tumor mutational burden,GSE285341,GSE285341,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,LLC1 cancer tissue in syngeneic mouse model,MONDO:0021117;MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,13780,counts,um,1.0,verified,0.5000044341965235,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,40172969,,GSM8701052,,,train,sda-all,samples/GSE285341/GSM8701052,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8701053,other,disease,lung neoplasm;cancer,,xenograft,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,217301,DDX54 downregulation enhances anti-PD1 therapy in immune-desert lung tumors with high tumor mutational burden,GSE285341,GSE285341,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,LLC1 cancer tissue in syngeneic mouse model,MONDO:0021117;MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,13780,counts,um,1.0,verified,0.5000075165363801,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,40172969,,GSM8701053,,,train,sda-all,samples/GSE285341/GSM8701053,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8703563,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3493,Fibroblast-Derived Thrombospondin 2 Shapes the Immune-Exclusionary Environment at Invasive Fronts in Colorectal Cancer [Visium,GSE285505,GSE285505,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colorectal carcinoma,MONDO:0024331,luna,Colorectal carcinoma,CMS4,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.806309831681959,platform_constant,4.806309831681959,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41276505,,GSM8703563,,,val,hesrt,samples/GSE285505/GSM8703563,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8703564,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2473,Fibroblast-Derived Thrombospondin 2 Shapes the Immune-Exclusionary Environment at Invasive Fronts in Colorectal Cancer [Visium,GSE285505,GSE285505,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colorectal carcinoma,MONDO:0024331,luna,Colorectal carcinoma,CMS4,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.808396885786738,platform_constant,4.808396885786738,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41276505,,GSM8703564,,,val,hesrt,samples/GSE285505/GSM8703564,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8703565,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3563,Fibroblast-Derived Thrombospondin 2 Shapes the Immune-Exclusionary Environment at Invasive Fronts in Colorectal Cancer [Visium,GSE285505,GSE285505,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colorectal carcinoma,MONDO:0024331,luna,Colorectal carcinoma,CMS1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.806869942373979,platform_constant,4.806869942373979,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41276505,,GSM8703565,,,val,hesrt,samples/GSE285505/GSM8703565,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8703566,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3415,Fibroblast-Derived Thrombospondin 2 Shapes the Immune-Exclusionary Environment at Invasive Fronts in Colorectal Cancer [Visium,GSE285505,GSE285505,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colorectal carcinoma,MONDO:0024331,luna,Colorectal carcinoma,CMS2,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.806869942373979,platform_constant,4.806869942373979,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41276505,,GSM8703566,,,val,hesrt,samples/GSE285505/GSM8703566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8707234,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4293,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,GSE285715,GSE285715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder cancer,MONDO:0004992,luna,bladder cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.594917248478929,platform_constant,6.594917248478929,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707234,,,val,hesrt,samples/GSE285715/GSM8707234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8707235,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3989,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,GSE285715,GSE285715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder cancer,MONDO:0004992,luna,bladder cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.766761671783493,platform_constant,4.766761671783493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707235,,,val,hesrt,samples/GSE285715/GSM8707235,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8707236,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3344,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,GSE285715,GSE285715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder cancer,MONDO:0004992,luna,bladder cancer,tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.917109735769261,platform_constant,4.917109735769261,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707236,,,val,hesrt,samples/GSE285715/GSM8707236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8707237,bladder,normal,,urinary bladder,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1417,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,GSE285715,GSE285715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Normal tissue adjacent to bladder cancer,,luna,bladder cancer,normal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.3907290994862356,platform_constant,3.3907290994862356,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707237,,,val,hesrt,samples/GSE285715/GSM8707237,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8707238,bladder,normal,,urinary bladder,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1811,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,GSE285715,GSE285715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Normal tissue adjacent to bladder cancer,,luna,bladder cancer,normal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.266297203166238,platform_constant,7.266297203166238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707238,,,val,hesrt,samples/GSE285715/GSM8707238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM8707239,bladder,normal,,urinary bladder,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2510,Unveiling Immune Metabolic Mechanisms in Bladder Cancer: Spatial Profiling Identifies ZFP36 as a Therapeutic Target,GSE285715,GSE285715,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Normal tissue adjacent to bladder cancer,,luna,bladder cancer,normal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.063000394580036,platform_constant,6.063000394580036,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,10.21203/rs.3.rs-5894269/v1,GSM8707239,,,val,hesrt,samples/GSE285715/GSM8707239,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.96, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8711459,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,male,Visium,Visium,True,fluorescence: multichannel (heuristic),728,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, postnatal day 0",,luna,,Non-transgenic (NT),luna,neonatal or infant,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.281017027089828,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711459,,,train,sda-all,samples/GSE285858/GSM8711459,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8711460,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,male,Visium,Visium,True,fluorescence: red (heuristic),848,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, postnatal day 0",,luna,,Non-transgenic (NT),luna,neonatal or infant,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.280894186631779,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711460,,,train,sda-all,samples/GSE285858/GSM8711460,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711461,brain,disease,Huntington disease,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,male,Visium,Visium,True,fluorescence: magenta (heuristic),1049,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, postnatal day 0",MONDO:0007739,luna,,Transgenic (R62),luna,neonatal or infant,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.277449035981772,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711461,,,train,sda-all,samples/GSE285858/GSM8711461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711462,brain,disease,Huntington disease,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,male,Visium,Visium,True,fluorescence: red (heuristic),777,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, postnatal day 0",MONDO:0007739,luna,,Transgenic (R62),luna,neonatal or infant,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.315444742850062,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711462,,,train,sda-all,samples/GSE285858/GSM8711462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8711463,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2271,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 4-week",,luna,,Non-transgenic (NT),luna,juvenile,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.284126918803069,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711463,,,train,sda-all,samples/GSE285858/GSM8711463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8711464,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,male,Visium,Visium,True,fluorescence: red (heuristic),2543,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 4-week",,luna,,Non-transgenic (NT),luna,juvenile,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.291224181334669,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711464,,,train,sda-all,samples/GSE285858/GSM8711464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711465,brain,normal,,brain,primary tissue,Mus musculus,house mouse,juvenile,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2779,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 4-week",,luna,,Non-transgenic (NT),luna,juvenile,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.27963583115327,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711465,,,train,sda-all,samples/GSE285858/GSM8711465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8711466,brain,disease,Huntington disease,brain,primary tissue,Mus musculus,house mouse,juvenile,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2592,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 4-week",MONDO:0007739,luna,,Transgenic (R62),luna,juvenile,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.28019802908275,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711466,,,train,sda-all,samples/GSE285858/GSM8711466,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711467,brain,disease,Huntington disease,brain,primary tissue,Mus musculus,house mouse,juvenile,male,Visium,Visium,True,fluorescence: red (heuristic),2445,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 4-week",MONDO:0007739,luna,,Transgenic (R62),luna,juvenile,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.290741731768981,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711467,,,train,sda-all,samples/GSE285858/GSM8711467,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8711468,brain,disease,Huntington disease,brain,primary tissue,Mus musculus,house mouse,juvenile,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2723,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 4-week",MONDO:0007739,luna,,Transgenic (R62),luna,juvenile,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.281877391944005,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40482637;41456279,,GSM8711468,,,train,sda-all,samples/GSE285858/GSM8711468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8711469,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2151,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 12-week",,luna,,Non-transgenic (NT),luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.28069891643098,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711469,,,train,sda-all,samples/GSE285858/GSM8711469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711470,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2341,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 12-week",,luna,,Non-transgenic (NT),luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.2839522258158365,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711470,,,train,sda-all,samples/GSE285858/GSM8711470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711471,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2714,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 12-week",,luna,,Non-transgenic (NT),luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.283403960185836,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711471,,,train,sda-all,samples/GSE285858/GSM8711471,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711472,brain,disease,Huntington disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2184,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 12-week",MONDO:0007739,luna,,Transgenic (R62),luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.286202554775762,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711472,,,train,sda-all,samples/GSE285858/GSM8711472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8711473,brain,disease,Huntington disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2073,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 12-week",MONDO:0007739,luna,,Transgenic (R62),luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.28764120244002,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711473,,,train,sda-all,samples/GSE285858/GSM8711473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8711474,brain,disease,Huntington disease,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: blue (heuristic),1915,Distinct Molecular Patterns in R6/2 HD Mouse Brain: Insights from Spatiotemporal Transcriptomics [Spatial Transcriptomics],GSE285858,GSE285858,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,"Brain, male, 12-week",MONDO:0007739,luna,,Transgenic (R62),luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.2818580644071815,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40482637;41456279,,GSM8711474,,,train,sda-all,samples/GSE285858/GSM8711474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8714492,peripheral nerve,disease,"chronic inflammatory demyelinating polyradiculoneuropathy;polyneuropathy, inflammatory demyelinating, chronic",sural nerve,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,12513,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],GSE285984,GSE285984,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015488,sural nerve,MONDO:0006702;MONDO:0100169,luna,CIDP,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000090336568243,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714492,,,val,sda-all,samples/GSE285984/GSM8714492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714493,peripheral nerve,disease,,sural nerve,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16248,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],GSE285984,GSE285984,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015488,sural nerve,,luna,CIAP,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000041349652663,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714493,,,val,sda-all,samples/GSE285984/GSM8714493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714494,peripheral nerve,disease,"chronic inflammatory demyelinating polyradiculoneuropathy;polyneuropathy, inflammatory demyelinating, chronic",sural nerve,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,20286,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],GSE285984,GSE285984,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015488,sural nerve,MONDO:0006702;MONDO:0100169,luna,CIDP,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000051793536167,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714494,,,val,sda-all,samples/GSE285984/GSM8714494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714495,peripheral nerve,disease,,sural nerve,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6411,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],GSE285984,GSE285984,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015488,sural nerve,,luna,CIAP,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000193718359335,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714495,,,val,sda-all,samples/GSE285984/GSM8714495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8714496,peripheral nerve,normal,,sural nerve,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,4784,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],GSE285984,GSE285984,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015488,sural nerve,,luna,CTRL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997946190182785,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714496,,,val,sda-all,samples/GSE285984/GSM8714496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8714497,peripheral nerve,normal,,sural nerve,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,9899,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],GSE285984,GSE285984,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015488,sural nerve,,luna,CTRL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000090336568243,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714497,,,val,sda-all,samples/GSE285984/GSM8714497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8714498,peripheral nerve,disease,polyneuropathy,sural nerve,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6858,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],GSE285984,GSE285984,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015488,sural nerve,MONDO:0001824,luna,VN,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000206213912566,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714498,,,val,sda-all,samples/GSE285984/GSM8714498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714499,peripheral nerve,disease,polyneuropathy,sural nerve,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7592,Multi-omic characterization of human sural nerves across polyneuropathies [Xenium],GSE285984,GSE285984,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015488,sural nerve,MONDO:0001824,luna,Vn,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997807017543855,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40849297,,GSM8714499,,,val,sda-all,samples/GSE285984/GSM8714499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8714610,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,57446,Chemotherapy triggers immune evasion by fostering LEPR+ Kupffer cell differentiation in liver metastases [RNA-seq],GSE285990,GSE285990,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver metastases,MONDO:1060297,luna,,FOLFOX regimen for 5 days,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,37885,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41687606,,GSM8714610,,,train,sda-all,samples/GSE285990/GSM8714610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8714611,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,51464,Chemotherapy triggers immune evasion by fostering LEPR+ Kupffer cell differentiation in liver metastases [RNA-seq],GSE285990,GSE285990,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver metastases,MONDO:1060297,luna,,FOLFOX regimen for 15 days,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,32171,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41687606,,GSM8714611,,,train,sda-all,samples/GSE285990/GSM8714611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8714858,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mesocricetus auratus,golden hamster,not stated,unknown,Visium,Visium,True,H&E,2556,Spatial transcriptomics reveals the immunomodulatory activities of an oncolytic adenovirus armed with a type I interferon in a replication-permissive immunocompetent pancreatic cancer model,GSE286008,GSE286008,10036,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,Mesocricetus auratus,uberon_chain,UBERON:0001264,HP-1 pancreatic cancer cell line-derived tumor,MONDO:0009831,luna,,OAd-Luc,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18296,counts,pixel,4.046779493503515,platform_constant,4.046779493503515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8714858,,,train,hesrt,samples/GSE286008/GSM8714858,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 0.64, ""disease_status"": 0.93, ""uberon"": 0.6000000000000001, ""life_stage"": 0.92}",,
GSM8714859,pancreas,disease,malignant pancreatic neoplasm,pancreas,xenograft,Mesocricetus auratus,golden hamster,not stated,unknown,Visium,Visium,True,H&E,2910,Spatial transcriptomics reveals the immunomodulatory activities of an oncolytic adenovirus armed with a type I interferon in a replication-permissive immunocompetent pancreatic cancer model,GSE286008,GSE286008,10036,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,Mesocricetus auratus,uberon_chain,UBERON:0001264,HP-1 pancreatic cancer cell line-derived tumor,MONDO:0009831,luna,,OAd-IFN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18296,counts,pixel,4.522564505967935,platform_constant,4.522564505967935,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8714859,,,train,hesrt,samples/GSE286008/GSM8714859,sda-tissue-disease-2.4,"{""organ"": 0.79, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8714860,pancreas,disease,malignant pancreatic neoplasm,pancreas,xenograft,Mesocricetus auratus,golden hamster,not stated,unknown,Visium,Visium,True,H&E,3106,Spatial transcriptomics reveals the immunomodulatory activities of an oncolytic adenovirus armed with a type I interferon in a replication-permissive immunocompetent pancreatic cancer model,GSE286008,GSE286008,10036,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,Mesocricetus auratus,uberon_chain,UBERON:0001264,HP-1 pancreatic cancer cell line-derived tumor,MONDO:0009831,luna,,OAd-IFN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18296,counts,pixel,4.252350734411144,platform_constant,4.252350734411144,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8714860,,,train,hesrt,samples/GSE286008/GSM8714860,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 0.52, ""disease_status"": 0.96, ""uberon"": 0.96, ""life_stage"": 0.88}",sample_kind,low_confidence_annotation
GSM8714861,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mesocricetus auratus,golden hamster,not stated,unknown,Visium,Visium,True,H&E,3722,Spatial transcriptomics reveals the immunomodulatory activities of an oncolytic adenovirus armed with a type I interferon in a replication-permissive immunocompetent pancreatic cancer model,GSE286008,GSE286008,10036,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,Mesocricetus auratus,uberon_chain,UBERON:0001264,HP-1 pancreatic cancer cell line-derived tumor,MONDO:0009831,luna,,OAd-IFN,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18296,counts,pixel,4.573555569648775,platform_constant,4.573555569648775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8714861,,,train,hesrt,samples/GSE286008/GSM8714861,sda-tissue-disease-2.4,"{""organ"": 0.79, ""sample_kind"": 0.64, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8717006,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,aged,male,Xenium,Xenium,True,fluorescence: DAPI,397721,Multi-omic and spatial analysis of mouse kidneys highlights sex-specific differences in gene regulation across the lifespan,GSE286051,GSE286051,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidneys,,luna,,,age rule: age with unit,adult,92 weeks,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999129071590315,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8717006,,,train,sda-all,samples/GSE286051/GSM8717006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8717007,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,aged,female,Xenium,Xenium,True,fluorescence: DAPI,421140,Multi-omic and spatial analysis of mouse kidneys highlights sex-specific differences in gene regulation across the lifespan,GSE286051,GSE286051,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidneys,,luna,,,age rule: age with unit,adult,92 weeks,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103391232423,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8717007,,,train,sda-all,samples/GSE286051/GSM8717007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM8717008,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,336623,Multi-omic and spatial analysis of mouse kidneys highlights sex-specific differences in gene regulation across the lifespan,GSE286051,GSE286051,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidneys,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000130976672366,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8717008,,,train,sda-all,samples/GSE286051/GSM8717008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8717009,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,320131,Multi-omic and spatial analysis of mouse kidneys highlights sex-specific differences in gene regulation across the lifespan,GSE286051,GSE286051,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,kidneys,,luna,,,age rule: age with unit,adult,12 weeks,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499989054290718,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8717009,,,train,sda-all,samples/GSE286051/GSM8717009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8717512,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,aged,female,Xenium,Xenium,True,fluorescence: DAPI,197597,Fibroblast orchestration of inflammaging via NF-kB activation (Xenium Analysis),GSE286085,GSE286085,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,,luna,,,luna,aged,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,429,counts,um,1.0,verified,0.4999993908975733,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41256682,,GSM8717512,,,train,sda-all,samples/GSE286085/GSM8717512,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8720409,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,15786,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,Control,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720409,,,test,sda-all,samples/GSE286184/GSM8720409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720410,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,17935,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,Control,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720410,,,test,sda-all,samples/GSE286184/GSM8720410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720411,kidney,disease,diabetic kidney disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,34621,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016,luna,,DKD,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720411,,,test,sda-all,samples/GSE286184/GSM8720411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8720412,kidney,disease,diabetic kidney disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,13519,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016,luna,,DKD,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8720412,,,test,sda-all,samples/GSE286184/GSM8720412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8720413,kidney,disease,diabetic kidney disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,20472,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016,luna,,DKD,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720413,,,test,sda-all,samples/GSE286184/GSM8720413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720414,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,52225,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,Control,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8720414,,,test,sda-all,samples/GSE286184/GSM8720414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720415,kidney,disease,diabetic kidney disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,27155,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016,luna,,DKD,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8720415,,,test,sda-all,samples/GSE286184/GSM8720415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720416,kidney,disease,diabetic kidney disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,13907,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016,luna,,DKD,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8720416,,,test,sda-all,samples/GSE286184/GSM8720416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8720417,kidney,disease,diabetic kidney disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,61683,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016,luna,,DKD,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM8720417,,,test,sda-all,samples/GSE286184/GSM8720417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8720420,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,72994,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,IgAN,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720420,,,test,sda-all,samples/GSE286184/GSM8720420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8720421,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,44801,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,IgAN,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720421,,,test,sda-all,samples/GSE286184/GSM8720421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720422,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,61589,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,MCD,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720422,,,test,sda-all,samples/GSE286184/GSM8720422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720423,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,61598,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,MCD,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720423,,,test,sda-all,samples/GSE286184/GSM8720423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720424,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,20202,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,MCD,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720424,,,test,sda-all,samples/GSE286184/GSM8720424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720425,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,52176,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,MCD,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720425,,,test,sda-all,samples/GSE286184/GSM8720425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720426,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,11798,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,MN,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720426,,,test,sda-all,samples/GSE286184/GSM8720426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720427,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,42263,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,MN,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720427,,,test,sda-all,samples/GSE286184/GSM8720427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8720428,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,19967,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,MN,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720428,,,test,sda-all,samples/GSE286184/GSM8720428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8720429,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,49095,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,MN,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720429,,,test,sda-all,samples/GSE286184/GSM8720429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8720430,kidney,disease,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,20340,Single-nucleus transcriptomic landscape of human glomerular diseases [Xenium],GSE286184,GSE286184,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,,luna,,MN,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM8720430,,,test,sda-all,samples/GSE286184/GSM8720430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9549467,spleen,disease,infectious disease,spleen,primary tissue,Mus musculus,house mouse,adult,female,Stereo-seq,Stereo-seq,False,,270939,A temporal map of B cell diversification mechanisms in mice,GSE286215,GSE286215,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,MONDO:0005550,luna,,Plasmodium infection,age rule: age with unit,juvenile,6-12 weeks,extracted field,female,,,fresh frozen,fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,26383,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42297974,,GSM9549467,,,test,sda-all,samples/GSE286215/GSM9549467,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM9549468,spleen,disease,infectious disease,spleen,primary tissue,Mus musculus,house mouse,adult,female,Stereo-seq,Stereo-seq,False,,390435,A temporal map of B cell diversification mechanisms in mice,GSE286215,GSE286215,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,Spleen,MONDO:0005550,luna,,Plasmodium infection,age rule: age with unit,juvenile,6-12 weeks,extracted field,female,,,fresh frozen,fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,27477,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42297974,,GSM9549468,,,test,sda-all,samples/GSE286215/GSM9549468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.8}",,
GSM8721365,lung,disease,interstitial lung disease;syndromic disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,317761,Spatial transcriptomic profiling of the lung tissues from a patient with recurrent anti-synthetase syndrome associated interstitial lung disease after bilateral lung transplantation and one untreated patient,GSE286227,GSE286227,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tissue,MONDO:0015925;MONDO:0002254,luna,anti-synthetase syndrome-associated interstitial lung disease,untreated ASS-ILD (Non-LTx),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8721365,,,train,hesrt,samples/GSE286227/GSM8721365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8721366,lung,disease,interstitial lung disease;syndromic disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,133878,Spatial transcriptomic profiling of the lung tissues from a patient with recurrent anti-synthetase syndrome associated interstitial lung disease after bilateral lung transplantation and one untreated patient,GSE286227,GSE286227,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung tissue,MONDO:0015925;MONDO:0002254,luna,anti-synthetase syndrome-associated interstitial lung disease,bilateral lung transplantation (LTx) for ASS-ILD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8721366,,,train,hesrt,samples/GSE286227/GSM8721366,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM8721640,brain,perturbation,,brain,organoid,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,552,Decoding transcriptional identity during Neuron-Astroglia Cell Fate driven by RAR-specific agonists [Spatial transcriptomics],GSE286250,GSE286250,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain organoid,,luna,,Vitamin A (3 months),rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,21639,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,41255712,,GSM8721640,,,train,sda-all,samples/GSE286250/GSM8721640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM8721641,brain,perturbation,,brain,organoid,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,593,Decoding transcriptional identity during Neuron-Astroglia Cell Fate driven by RAR-specific agonists [Spatial transcriptomics],GSE286250,GSE286250,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain organoid,,luna,,ATRA (3 months),rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,20881,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,41255712,,GSM8721641,,,train,sda-all,samples/GSE286250/GSM8721641,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.8, ""life_stage"": 0.99}",,
GSM8721642,brain,perturbation,,brain,organoid,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,469,Decoding transcriptional identity during Neuron-Astroglia Cell Fate driven by RAR-specific agonists [Spatial transcriptomics],GSE286250,GSE286250,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain organoid,,luna,,BMS753 (3 months),rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,20987,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,41255712,,GSM8721642,,,train,sda-all,samples/GSE286250/GSM8721642,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM8721643,brain,perturbation,,brain,organoid,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,365,Decoding transcriptional identity during Neuron-Astroglia Cell Fate driven by RAR-specific agonists [Spatial transcriptomics],GSE286250,GSE286250,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain organoid,,luna,,BMS961+BMS641 (3 months),rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Spatial transcriptomics,,,spot,20800,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,41255712,,GSM8721643,,,train,sda-all,samples/GSE286250/GSM8721643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8721777,liver,normal,,right lobe of liver,primary tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,76708,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,GSE286254,GSE286254,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001114,,,luna,,,luna,juvenile,7-12,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_100g,xenium-1.6.0.8,cell,541,counts,um,1.0,verified,0.50001315492746,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721777,,,train,sda-all,samples/GSE286254/GSM8721777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM8721778,liver,normal,,parenchyma,primary tissue,Homo sapiens,human,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,77666,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,GSE286254,GSE286254,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000353,,,luna,,,luna,juvenile,7-12,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_100g,xenium-1.6.0.8,cell,541,counts,um,1.0,verified,0.49999827669400976,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721778,,,train,sda-all,samples/GSE286254/GSM8721778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8721779,liver,disease,hamartoma,liver,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,49666,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,GSE286254,GSE286254,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,,MONDO:0006499,luna,,,age rule: bare number read as years,adult,38,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_100g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.499993548720066,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721779,,,train,sda-all,samples/GSE286254/GSM8721779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8721780,liver,normal,,parenchyma,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,42255,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,GSE286254,GSE286254,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000353,,,luna,,,age rule: bare number read as years,adult,38,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_100g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.49998553121124434,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721780,,,train,sda-all,samples/GSE286254/GSM8721780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.58, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM8721781,liver,normal,,parenchyma,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,55698,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,GSE286254,GSE286254,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000353,,,luna,,,age rule: bare number read as years,adult,38,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_100g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000047006618532,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721781,,,train,sda-all,samples/GSE286254/GSM8721781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.67, ""life_stage"": 0.84}",,
GSM8721782,liver,normal,,parenchyma,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,142659,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,GSE286254,GSE286254,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000353,,,luna,,,age rule: bare number read as years,adult,47,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000018268621815,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721782,,,train,sda-all,samples/GSE286254/GSM8721782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.76, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8721783,liver,normal,,parenchyma,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,125967,A Single-Cell Atlas Of Human Pediatric Liver Reveals Age-Related Hepatic Gene Signatures,GSE286254,GSE286254,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000353,,,luna,,,age rule: bare number read as years,adult,43,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_100g,xenium-1.6.0.8,cell,541,counts,um,1.0,verified,0.5000143266475644,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8721783,,,train,sda-all,samples/GSE286254/GSM8721783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.42, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8727282,brain,disease,brain neoplasm;glioblastoma,left temporal lobe,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4322,Spatial multi-omics defines a shared glioblastoma infiltrative signature at the resection margin [10x Spatial],GSE286413,GSE286413,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002808,Brain tumor,MONDO:0021211;MONDO:0018177,luna,glioblastoma,Core-to-Margin,age rule: bare number read as years,aged,79,extracted field,female,GSE286413:G740,G740,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.657464328326223,platform_constant,4.657464328326223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40759029,,GSM8727282,,,val,hesrt,samples/GSE286413/GSM8727282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8727283,brain,disease,brain neoplasm;glioblastoma,right temporal lobe,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3626,Spatial multi-omics defines a shared glioblastoma infiltrative signature at the resection margin [10x Spatial],GSE286413,GSE286413,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002809,Brain tumor,MONDO:0021211;MONDO:0018177,luna,glioblastoma,Core-to-Margin,age rule: bare number read as years,adult,35,extracted field,male,GSE286413:G4,G4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40759029,,GSM8727283,,,val,hesrt,samples/GSE286413/GSM8727283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8727829,lymph node,normal,,popliteal lymph node,primary tissue,Mus musculus,house mouse,adult,male,Slide-seq,Slide-seq,False,,78205,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,GSE286452,GSE286452,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001543,Popliteal Lymph Node,,luna,,10uL PBS injection in the left hind and tissue collection 3dpi,age rule: age with unit,adult,3 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727829,,,train,sda-all,samples/GSE286452/GSM8727829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8727830,lymph node,disease,vaccinia,popliteal lymph node,primary tissue,Mus musculus,house mouse,adult,male,Slide-seq,Slide-seq,False,,78462,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,GSE286452,GSE286452,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001543,Popliteal Lymph Node,MONDO:0002595,luna,,10uL 1e5 PFU Vaccinia virus injection in the left hind and tissue collection 3dpi,age rule: age with unit,adult,3 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727830,,,train,sda-all,samples/GSE286452/GSM8727830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8727831,lymph node,disease,vaccinia,popliteal lymph node,primary tissue,Mus musculus,house mouse,adult,male,Slide-seq,Slide-seq,False,,77245,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,GSE286452,GSE286452,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001543,Popliteal Lymph Node,MONDO:0002595,mondo_predicate (Luna: perturbation),,10uL 1e5 PFU Vaccinia virus injection in the left hind and tissue collection 7dpi,age rule: age with unit,adult,3 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727831,,,train,sda-all,samples/GSE286452/GSM8727831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8727832,lymph node,disease,vaccinia,popliteal lymph node,primary tissue,Mus musculus,house mouse,adult,male,Slide-seq,Slide-seq,False,,78558,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,GSE286452,GSE286452,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001543,Popliteal Lymph Node,MONDO:0002595,luna,,10uL 1e5 PFU Vaccinia virus injection in the left hind and tissue collection 10dpi,age rule: age with unit,adult,3 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727832,,,train,sda-all,samples/GSE286452/GSM8727832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8727833,lymph node,disease,vaccinia,popliteal lymph node,primary tissue,Mus musculus,house mouse,adult,male,Slide-seq,Slide-seq,False,,78224,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,GSE286452,GSE286452,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001543,Popliteal Lymph Node,MONDO:0002595,luna,,10uL 1e5 PFU Vaccinia virus injection in the left hind and tissue collection 14dpi,age rule: age with unit,adult,3 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727833,,,train,sda-all,samples/GSE286452/GSM8727833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8727834,lymph node,disease,vaccinia,popliteal lymph node,primary tissue,Mus musculus,house mouse,adult,male,Slide-seq,Slide-seq,False,,79423,Spatiotemporal dynamics of the lymph adaptive immune repertoire in response to viral infection,GSE286452,GSE286452,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001543,Popliteal Lymph Node,MONDO:0002595,luna,,10uL 1e5 PFU Vaccinia virus injection in the left hind and tissue collection 21dpi,age rule: age with unit,adult,3 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Slide-seq,,,bead,31053,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,39975238,,GSM8727834,,,train,sda-all,samples/GSE286452/GSM8727834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8728261,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2273,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],GSE286477,GSE286477,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0018177,luna,glioblastoma,pretreatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18087,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-c61e278c66dd,library_alias,GSM8728262;GSM8728263,train,hesrt,samples/GSE286477/GSM8728261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 0.99}",,
GSM8728264,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4234,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],GSE286477,GSE286477,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0018177,luna,glioblastoma,posttreatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18087,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-dfb115bf5372,library_alias,GSM8728265;GSM8728266,train,hesrt,samples/GSE286477/GSM8728264,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8728267,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2166,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],GSE286477,GSE286477,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0018177,luna,glioblastoma,pretreatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18087,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-575184a33e51,library_alias,GSM8728268;GSM8728269,train,hesrt,samples/GSE286477/GSM8728267,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8728270,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3128,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],GSE286477,GSE286477,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0018177,luna,glioblastoma,posttreatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18087,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-e3ad5a05c5fe,library_alias,GSM8728271;GSM8728272,train,hesrt,samples/GSE286477/GSM8728270,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8728273,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1858,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],GSE286477,GSE286477,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0018177,luna,glioblastoma,pretreatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18087,counts,pixel,4.740454631399772,platform_constant,4.740454631399772,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-a625342a3f13,library_alias,GSM8728274;GSM8728275,train,hesrt,samples/GSE286477/GSM8728273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8728276,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,470,Dendritic Cell Immunotherapy with Homologous Antigenic Loading as Adjuvant Treatment for Glioblastoma: Phase I Trial Analysis [Spatial Transcriptome],GSE286477,GSE286477,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0021211;MONDO:0018177,luna,glioblastoma,posttreatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18087,counts,pixel,4.740454631399772,platform_constant,4.740454631399772,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,,,CG-134ac3fea6be,library_alias,GSM8728277;GSM8728278,train,hesrt,samples/GSE286477/GSM8728276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM8734558,head and neck,disease,head and neck squamous cell carcinoma;malignant tumor of neck,pharynx,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,103159,Analysis of B cell neighborhoods via single cell spatial transcriptomics in head and neck cancer patients,GSE286935,GSE286935,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0006562,Pharynx,MONDO:0010150;MONDO:0021310,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CoSMX,,,cell,979,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,39970232,,GSM8734558,,,train,sda-all,samples/GSE286935/GSM8734558,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8734926,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,148741,Somatic mutations distinguish melanocyte subpopulations in human skin,GSE286964,GSE286964,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Non-cancerous skin,,luna,,,age rule: age in years,adult,63 years,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998782151208104,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8734926,,,train,sda-all,samples/GSE286964/GSM8734926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM8734927,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,145489,Somatic mutations distinguish melanocyte subpopulations in human skin,GSE286964,GSE286964,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Non-cancerous skin,,luna,,,age rule: age in years,adult,63 years,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000077475337017,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8734927,,,train,sda-all,samples/GSE286964/GSM8734927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM8741261,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3680,Spatial Transcriptomics Uncovers Brain Region-Specific Transcriptional Changes Associated with Development and Aging,GSE287202,GSE287202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain (coronal section),,luna,,aged 28 months,age rule: age with unit,aged,28 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,7.0224174557521515,platform_constant,7.0224174557521515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40563967,,GSM8741261,,,test,hesrt,samples/GSE287202/GSM8741261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8741262,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3570,Spatial Transcriptomics Uncovers Brain Region-Specific Transcriptional Changes Associated with Development and Aging,GSE287202,GSE287202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain (coronal section),,luna,,aged 28 months,age rule: age with unit,aged,28 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.951251719262127,platform_constant,6.951251719262127,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40563967,,GSM8741262,,,test,hesrt,samples/GSE287202/GSM8741262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8741263,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2919,Spatial Transcriptomics Uncovers Brain Region-Specific Transcriptional Changes Associated with Development and Aging,GSE287202,GSE287202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain (coronal section),,luna,,adult 12-15 weeks,age rule: age with unit,adult,12–15 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.243157726241051,platform_constant,4.243157726241051,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40563967,,GSM8741263,,,test,hesrt,samples/GSE287202/GSM8741263,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.93}",,
GSM8741264,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3261,Spatial Transcriptomics Uncovers Brain Region-Specific Transcriptional Changes Associated with Development and Aging,GSE287202,GSE287202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain (coronal section),,luna,,adult 12-15 weeks,age rule: age with unit,adult,12–15 weeks,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.243157726241051,platform_constant,4.243157726241051,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40563967,,GSM8741264,,,test,hesrt,samples/GSE287202/GSM8741264,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM8742917,uterus,normal,,endometrium,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,751,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,GSE287278,GSE287278,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001295,uterine endometrium,,luna,,control,age rule: bare number read as years,not stated,25,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.9345794392523364,platform_constant,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742917,,,train,hesrt,samples/GSE287278/GSM8742917,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.6900000000000001}",,
GSM8742918,uterus,normal,,endometrium,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,820,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,GSE287278,GSE287278,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001295,uterine endometrium,,luna,,control,age rule: bare number read as years,not stated,24,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.9345386270319954,platform_constant,0.9345386270319954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742918,,,train,hesrt,samples/GSE287278/GSM8742918,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8742919,uterus,normal,,endometrium,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1805,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,GSE287278,GSE287278,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001295,uterine endometrium,,luna,,control,age rule: bare number read as years,not stated,32,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.9345794392523364,platform_constant,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742919,,,train,hesrt,samples/GSE287278/GSM8742919,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM8742920,uterus,normal,,endometrium,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2018,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,GSE287278,GSE287278,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001295,uterine endometrium,,luna,,control,age rule: bare number read as years,not stated,31,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.9345386270319954,platform_constant,0.9345386270319954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742920,,,train,hesrt,samples/GSE287278/GSM8742920,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM8742921,uterus,disease,,endometrium,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1334,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,GSE287278,GSE287278,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001295,uterine endometrium,,luna,repeated implantation failure,repeated implantation failure,age rule: bare number read as years,adult,31,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.9345794392523364,platform_constant,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742921,,,train,hesrt,samples/GSE287278/GSM8742921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.73}",,
GSM8742922,uterus,disease,,endometrium,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1367,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,GSE287278,GSE287278,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001295,uterine endometrium,,luna,repeated implantation failure,repeated implantation failure,age rule: bare number read as years,not stated,33,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.9345794392523364,platform_constant,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742922,,,train,hesrt,samples/GSE287278/GSM8742922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8742923,uterus,disease,,endometrium,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,914,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,GSE287278,GSE287278,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001295,uterine endometrium,,luna,repeated implantation failure,repeated implantation failure,age rule: bare number read as years,not stated,25,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.9345794392523364,platform_constant,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742923,,,train,hesrt,samples/GSE287278/GSM8742923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.78}",,
GSM8742924,uterus,disease,,endometrium,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1154,A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients,GSE287278,GSE287278,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001295,uterine endometrium,,luna,repeated implantation failure,repeated implantation failure,age rule: bare number read as years,not stated,29,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.9345794392523364,platform_constant,0.9345794392523364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41162434,,GSM8742924,,,train,hesrt,samples/GSE287278/GSM8742924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM8745172,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),671,Gas6-Axl signaling drives oral regenerative wound repair,GSE287384,GSE287384,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Unwounded,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.787267816752401,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40601775,,GSM8745172,,,train,sda-all,samples/GSE287384/GSM8745172,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8745173,oral cavity,normal,,mouth mucosa,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1288,Gas6-Axl signaling drives oral regenerative wound repair,GSE287384,GSE287384,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003729,Oral Mucosa,,luna,,Unwounded,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.348641901134696,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40601775,,GSM8745173,,,train,sda-all,samples/GSE287384/GSM8745173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8745174,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1141,Gas6-Axl signaling drives oral regenerative wound repair,GSE287384,GSE287384,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,POD4,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.784592540135621,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40601775,,GSM8745174,,,train,sda-all,samples/GSE287384/GSM8745174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8745175,oral cavity,perturbation,,mouth mucosa,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),430,Gas6-Axl signaling drives oral regenerative wound repair,GSE287384,GSE287384,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003729,Oral Mucosa,,luna,,POD4,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.785507439696275,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40601775,,GSM8745175,,,train,sda-all,samples/GSE287384/GSM8745175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8746067,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3124,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),GSE287459,GSE287459,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,pulmonary LAM,MONDO:0011705,luna,lymphangioleiomyomatosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,15.635177205572653,platform_constant,15.635177205572653,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746067,,,test,hesrt,samples/GSE287459/GSM8746067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746068,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3153,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),GSE287459,GSE287459,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,pulmonary LAM,MONDO:0011705,luna,lymphangioleiomyomatosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,10.727272564218113,platform_constant,10.727272564218113,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746068,,,test,hesrt,samples/GSE287459/GSM8746068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746069,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3813,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),GSE287459,GSE287459,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,pulmonary LAM,MONDO:0011705,luna,lymphangioleiomyomatosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,9.775140255181535,platform_constant,9.775140255181535,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746069,,,test,hesrt,samples/GSE287459/GSM8746069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746070,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4007,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),GSE287459,GSE287459,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,pulmonary LAM,MONDO:0011705,luna,lymphangioleiomyomatosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,11.614647182315492,platform_constant,11.614647182315492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746070,,,test,hesrt,samples/GSE287459/GSM8746070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8746071,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2421,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),GSE287459,GSE287459,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,pulmonary LAM,MONDO:0011705,luna,lymphangioleiomyomatosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,15.061177085665513,platform_constant,15.061177085665513,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746071,,,test,hesrt,samples/GSE287459/GSM8746071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746072,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2365,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),GSE287459,GSE287459,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,pulmonary LAM,MONDO:0011705,luna,lymphangioleiomyomatosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,10.320081769890297,platform_constant,10.320081769890297,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746072,,,test,hesrt,samples/GSE287459/GSM8746072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746073,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4743,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),GSE287459,GSE287459,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,pulmonary LAM,MONDO:0011705,luna,lymphangioleiomyomatosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,9.554020222913394,platform_constant,9.554020222913394,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746073,,,test,hesrt,samples/GSE287459/GSM8746073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746074,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3811,Modulation of infiltrating CD206-positive macrophages restricts progression of pulmonary lymphangioleiomyomatosis (LAM),GSE287459,GSE287459,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,pulmonary LAM,MONDO:0011705,luna,lymphangioleiomyomatosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,11.73459613734569,platform_constant,11.73459613734569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8746074,,,test,hesrt,samples/GSE287459/GSM8746074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746298,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,64420,LUAD spatial transcriptomics,GSE287472,GSE287472,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,LUAD,MONDO:0005061,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42358378,,GSM8746298,,,train,sda-all,samples/GSE287472/GSM8746298,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8746576,other,normal,,intervertebral disk,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),140810,Spatial transcriptomics of Slc16a1-Col2a1CreERT2 mouse spinal motion segments reveals compartment-distinct differences in the intervertebral disc,GSE287499,GSE287499,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001066,spinal motion segment,,luna,,CTR,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium_hd,,,bin,32285,counts,um,1.0,verified,4.775132370875076,UNRESOLVED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,PASS,,,42236482,,GSM8746576,,,train,sda-all,samples/GSE287499/GSM8746576,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8746577,other,perturbation,,intervertebral disk,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),141538,Spatial transcriptomics of Slc16a1-Col2a1CreERT2 mouse spinal motion segments reveals compartment-distinct differences in the intervertebral disc,GSE287499,GSE287499,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001066,spinal motion segment,,luna,,cKO,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium_hd,,,bin,32285,counts,um,1.0,verified,3.4359579495765873,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42236482,,GSM8746577,,,train,sda-all,samples/GSE287499/GSM8746577,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8756693,stomach,disease,,stomach,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2182,Systematic inference of super-resolution cell spatial profiles from histology images,GSE287979,GSE287979,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Pre-cancerours gastric,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.777358882473598,platform_constant,6.777358882473598,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,39984438,,GSM8756693,,,train,hesrt,samples/GSE287979/GSM8756693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8760701,lymph node,disease,diffuse large B-cell lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,Patho-DBiT,False,,2500,Spatially resolving chromatin landscapes in formalin-fixed paraffin-embedded tissues,GSE288178,GSE288178,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,human lymph node DLBCL,MONDO:0018905,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Patho-DBiT,,,spot,31525,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42067542,,GSM8760701,,,train,sda-all,samples/GSE288178/GSM8760701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8761144,spleen,perturbation,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1058,A rewired myeloid niche in spleen establishes stress erythropoiesis,GSE288200,GSE288200,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,,luna,,IL18m-day5,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,visium,,,spot,19479,counts,um,1.0,verified,4.80136417387274,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8761144,,,train,sda-all,samples/GSE288200/GSM8761144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8761646,esophagus,disease,Barrett esophagus,esophagus,primary tissue,Homo sapiens,human,not stated,unknown,Other,seqFISH,False,,4271,"Clonal cell states link gastroesophageal junction tissues, metaplasia, and cancer [Spatial transcriptomics]",GSE288235,GSE288235,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001043,Barrett's Esophagus,MONDO:0013662,luna,Barrett's Esophagus,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,other,,,cell,106,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,36747708;41360789,,GSM8761646,,,test,sda-all,samples/GSE288235/GSM8761646,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8761647,esophagus,disease,Barrett esophagus,esophagus,primary tissue,Homo sapiens,human,not stated,unknown,Other,seqFISH,False,,4314,"Clonal cell states link gastroesophageal junction tissues, metaplasia, and cancer [Spatial transcriptomics]",GSE288235,GSE288235,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001043,Barrett's Esophagus,MONDO:0013662,luna,Barrett's Esophagus,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,other,,,cell,106,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,36747708;41360789,,GSM8761647,,,test,sda-all,samples/GSE288235/GSM8761647,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8761648,esophagus,disease,Barrett esophagus,esophagus,primary tissue,Homo sapiens,human,not stated,unknown,Other,seqFISH,False,,4297,"Clonal cell states link gastroesophageal junction tissues, metaplasia, and cancer [Spatial transcriptomics]",GSE288235,GSE288235,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001043,Barrett's Esophagus,MONDO:0013662,luna,Barrett's Esophagus,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,other,,,cell,106,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,36747708;41360789,,GSM8761648,,,test,sda-all,samples/GSE288235/GSM8761648,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8766366,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,7471,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766366,,,train,sda-all,samples/GSE288365/GSM8766366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8766367,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,7890,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766367,,,train,sda-all,samples/GSE288365/GSM8766367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766368,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,8196,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766368,,,train,sda-all,samples/GSE288365/GSM8766368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766369,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,9825,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766369,,,train,sda-all,samples/GSE288365/GSM8766369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766370,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,7359,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766370,,,train,sda-all,samples/GSE288365/GSM8766370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766371,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,9872,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766371,,,train,sda-all,samples/GSE288365/GSM8766371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766372,spinal cord,disease,amyotrophic lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,6393,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766372,,,train,sda-all,samples/GSE288365/GSM8766372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8766373,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,11634,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0024257,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766373,,,train,sda-all,samples/GSE288365/GSM8766373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766374,spinal cord,disease,amyotrophic lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,9232,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766374,,,train,sda-all,samples/GSE288365/GSM8766374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766375,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,8272,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766375,,,train,sda-all,samples/GSE288365/GSM8766375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766376,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,6956,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766376,,,train,sda-all,samples/GSE288365/GSM8766376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766377,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3642,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766377,,,train,sda-all,samples/GSE288365/GSM8766377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766378,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,7568,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766378,,,train,sda-all,samples/GSE288365/GSM8766378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766379,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,8409,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766379,,,train,sda-all,samples/GSE288365/GSM8766379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766380,spinal cord,disease,amyotrophic lateral sclerosis;hereditary motor neuron disease,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,6977,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0024257,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766380,,,train,sda-all,samples/GSE288365/GSM8766380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766381,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,8853,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766381,,,train,sda-all,samples/GSE288365/GSM8766381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8766382,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1243,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766382,,,train,sda-all,samples/GSE288365/GSM8766382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8766383,spinal cord,disease,amyotrophic lateral sclerosis;lateral sclerosis,cervical spinal cord,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,7583,Molecular Drivers of Neuroinflammation in Amyotrophic Lateral Sclerosis,GSE288365,GSE288365,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002726,Cervical spinal cord,MONDO:0004976;MONDO:0018155,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42135512,,GSM8766383,,,train,sda-all,samples/GSE288365/GSM8766383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8768679,peritoneum,disease,ovarian carcinoma,omentum,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,1534,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,GSE288483,GSE288483,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003688,Omentum,MONDO:0005140,luna,high-grade serous ovarian carcinoma,Stage IIIC,age rule: bare number read as years,adult,60,not stated,,GSE288483:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.370483230499745,platform_constant,4.370483230499745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768679,,,train,hesrt,samples/GSE288483/GSM8768679,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.66, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8768680,other,disease,ovarian carcinoma,fallopian tube,tumour tissue,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,1131,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,GSE288483,GSE288483,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003889,Fallopian tube,MONDO:0005140,luna,high-grade serous ovarian carcinoma,Stage IVB,age rule: bare number read as years,aged,68,not stated,,GSE288483:Patient2,Patient2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.370101910188587,platform_constant,4.370101910188587,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768680,,,train,hesrt,samples/GSE288483/GSM8768680,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8768681,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,2002,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,GSE288483,GSE288483,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0005140,luna,high-grade serous ovarian carcinoma,Stage IVA,age rule: bare number read as years,adult,49,not stated,,GSE288483:Patient3,Patient3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.370101910188565,platform_constant,4.370101910188565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768681,,,train,hesrt,samples/GSE288483/GSM8768681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8768682,other,disease,ovarian carcinoma,,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,1393,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,GSE288483,GSE288483,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal stump,MONDO:0005140,luna,high-grade serous ovarian carcinoma,Stage IIIB,age rule: bare number read as years,adult,56,not stated,,GSE288483:Patient4,Patient4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.370101910188565,platform_constant,4.370101910188565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768682,,,train,hesrt,samples/GSE288483/GSM8768682,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.56, ""disease_status"": 1.0, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8768683,peritoneum,disease,ovarian carcinoma,peritoneum,metastasis,Homo sapiens,human,aged,unknown,Visium,Visium,True,H&E,1833,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,GSE288483,GSE288483,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Peritoneum,MONDO:0005140,luna,high-grade serous ovarian carcinoma,Stage IIIC,age rule: bare number read as years,aged,77,not stated,,GSE288483:Patient5,Patient5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.8233187092773155,platform_constant,4.8233187092773155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768683,,,train,hesrt,samples/GSE288483/GSM8768683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.64, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8768684,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,2026,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,GSE288483,GSE288483,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0005140,luna,high-grade serous ovarian carcinoma,Stage IIIC,age rule: bare number read as years,adult,38,not stated,,GSE288483:Patient6,Patient6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.822934330802071,platform_constant,4.822934330802071,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768684,,,train,hesrt,samples/GSE288483/GSM8768684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8768685,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,2119,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,GSE288483,GSE288483,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0005140,luna,high-grade serous ovarian carcinoma,Stage IIIC,age rule: bare number read as years,adult,56,not stated,,GSE288483:Patient7,Patient7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.822934330802071,platform_constant,4.822934330802071,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768685,,,train,hesrt,samples/GSE288483/GSM8768685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8768686,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Visium,Visium,True,H&E,3284,Spatial transcriptomics for high-grade serous ovarian carcinoma who were treated with Olaparib maintenance therapy,GSE288483,GSE288483,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0005140,luna,high-grade serous ovarian carcinoma,Stage IVB,age rule: bare number read as years,adult,53,not stated,,GSE288483:Patient8,Patient8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.7962931398204285,platform_constant,4.7962931398204285,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41219363,,GSM8768686,,,train,hesrt,samples/GSE288483/GSM8768686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8770189,blood vessel,disease,atherosclerosis,aorta,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,40583,Effect of Pdk4 smooth muscle cell-specific knockout on atherosclerosis,GSE288576,GSE288576,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000947,aorta,MONDO:0005311,luna,,both WT (right) & KO (left) located in the same section,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,slide_seq,,,bead,20779,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM8770189,,,train,sda-all,samples/GSE288576/GSM8770189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8770954,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,GSE288607,GSE288607,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0001708,luna,sarcoidosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,0.5025125628140703,platform_constant,0.5025125628140703,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770954,,,val,hesrt,samples/GSE288607/GSM8770954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770955,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,GSE288607,GSE288607,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0001708,luna,sarcoidosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,5.336665245732363,platform_constant,5.336665245732363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770955,,,val,hesrt,samples/GSE288607/GSM8770955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770956,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4443,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,GSE288607,GSE288607,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0001708,luna,sarcoidosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.549987889181838,platform_constant,4.549987889181838,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770956,,,val,hesrt,samples/GSE288607/GSM8770956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8770957,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3923,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,GSE288607,GSE288607,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0001708,luna,sarcoidosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.266666754047988,platform_constant,4.266666754047988,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770957,,,val,hesrt,samples/GSE288607/GSM8770957,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770958,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3332,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,GSE288607,GSE288607,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0001708,luna,sarcoidosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.117466871137884,platform_constant,4.117466871137884,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770958,,,val,hesrt,samples/GSE288607/GSM8770958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770959,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2285,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,GSE288607,GSE288607,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0001708,luna,sarcoidosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,1.1903918403013953,platform_constant,1.1903918403013953,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770959,,,val,hesrt,samples/GSE288607/GSM8770959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770960,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,4992,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,GSE288607,GSE288607,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0001708,luna,sarcoidosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,0.5473313553908552,platform_constant,,WITHHELD,,,image_review_fail,,human_visual_review,FAIL,图像与细胞/spot 错位,Image registration screen 2026-11-11: only 31% of the spots fall inside the image; the spot grid is about three times larger than the image. The image was removed on 2026-11-11. Expression values and coordinates equal the GEO deposit.,,,GSM8770960,,,val,hesrt,samples/GSE288607/GSM8770960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770961,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3043,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,GSE288607,GSE288607,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0001708,luna,sarcoidosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,0.502487185955009,platform_constant,0.502487185955009,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770961,,,val,hesrt,samples/GSE288607/GSM8770961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8770962,lung,disease,pulmonary sarcoidosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4112,Spatial transcriptomics of cellular niches in pulmonary granuloma of chronic sarcoidosis patients,GSE288607,GSE288607,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0001708,luna,sarcoidosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,0.5024554702869775,platform_constant,0.5024554702869775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8770962,,,val,hesrt,samples/GSE288607/GSM8770962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8772705,skeletal muscle,normal,,muscle of abdomen,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7797,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],GSE288663,GSE288663,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002378,Lower abdominal muscle,,luna,,Vehicle,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5060,counts,um,1.0,verified,0.499979353773098,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40504614,,GSM8772705,,,val,sda-all,samples/GSE288663/GSM8772705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.78, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8772706,skeletal muscle,normal,,muscle of abdomen,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6240,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],GSE288663,GSE288663,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002378,Lower abdominal muscle,,luna,,Vehicle,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,4956,counts,um,1.0,verified,0.4999673853336995,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40504614,,GSM8772706,,,val,sda-all,samples/GSE288663/GSM8772706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8772707,skeletal muscle,perturbation,,muscle of abdomen,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,5055,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],GSE288663,GSE288663,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002378,Lower abdominal muscle,,luna,,E2+P4,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,4892,counts,um,1.0,verified,0.5000061708079644,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40504614,,GSM8772707,,,val,sda-all,samples/GSE288663/GSM8772707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.77, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8772708,skeletal muscle,perturbation,,muscle of abdomen,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,8609,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],GSE288663,GSE288663,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002378,Lower abdominal muscle,,luna,,E2+P4,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5101,counts,um,1.0,verified,0.5000235682300259,VERIFIED,ABSENT,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40504614,,GSM8772708,,,val,sda-all,samples/GSE288663/GSM8772708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.79, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8772709,skeletal muscle,perturbation,,muscle of abdomen,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6188,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],GSE288663,GSE288663,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002378,Lower abdominal muscle,,luna,,E2+P4+RU486,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,4984,counts,um,1.0,verified,0.5000185154707044,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40504614,,GSM8772709,,,val,sda-all,samples/GSE288663/GSM8772709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM8772710,skeletal muscle,perturbation,,muscle of abdomen,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,5076,Role of progesterone receptor in inguinal hernia formation via skeletal muscle fibrosis [Hernia_Xenium],GSE288663,GSE288663,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002378,Lower abdominal muscle,,luna,,E2+P4+RU486,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,4749,counts,um,1.0,verified,0.49997435897435893,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40504614,,GSM8772710,,,val,sda-all,samples/GSE288663/GSM8772710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8774701,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,67850,Spatial dynamics of the tumor microenvironment associated with emerging resistance to targeted therapy in EGFR-mutated non–small cell lung cancer,GSE288758,GSE288758,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005233,luna,non-small cell lung cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41152910,,GSM8774701,,,train,hesrt,samples/GSE288758/GSM8774701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8774702,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,39313,Spatial dynamics of the tumor microenvironment associated with emerging resistance to targeted therapy in EGFR-mutated non–small cell lung cancer,GSE288758,GSE288758,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005233,luna,non-small cell lung cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41152910,,GSM8774702,,,train,hesrt,samples/GSE288758/GSM8774702,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8778056,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1518,"Spatial Transcriptomics, Histopathology, and Magnetic Resonance Subfield Segmentation of Hippocampal Sclerosis Compared to Normal Hippocampus: A Proof-of-Concept Study",GSE288888,GSE288888,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus on autopsy,,luna,,Healthy human control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.273846181198778,platform_constant,4.273846181198778,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8778056,,,train,hesrt,samples/GSE288888/GSM8778056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8778057,brain,disease,temporal lobe epilepsy,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2710,"Spatial Transcriptomics, Histopathology, and Magnetic Resonance Subfield Segmentation of Hippocampal Sclerosis Compared to Normal Hippocampus: A Proof-of-Concept Study",GSE288888,GSE288888,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus on autopsy,MONDO:0005115,luna,Hippocampal sclerosis,Drug Resistant Mesial Temporal Lobe Epilepsy (MTLE) with Hippocampal Sclerosis (HS),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.270792083265175,platform_constant,4.270792083265175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8778057,,,train,hesrt,samples/GSE288888/GSM8778057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM8780608,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,119,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,contol,luna,adult,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780608,,,train,sda-all,samples/GSE289001/GSM8780608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8780609,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,5159,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,contol,luna,adult,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780609,,,train,sda-all,samples/GSE289001/GSM8780609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8780610,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,5686,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,contol,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780610,,,train,sda-all,samples/GSE289001/GSM8780610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM8780611,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,4833,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,contol,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780611,,,train,sda-all,samples/GSE289001/GSM8780611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM8780612,kidney,disease,DICER1-related tumor predisposition;neoplasm,kidney,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,5517,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216;MONDO:0005070,luna,,HDT tumor,luna,adult,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780612,,,train,sda-all,samples/GSE289001/GSM8780612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM8780613,kidney,disease,DICER1-related tumor predisposition;neoplasm,kidney,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,8675,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216;MONDO:0005070,luna,,HDT tumor,luna,adult,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780613,,,train,sda-all,samples/GSE289001/GSM8780613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM8780614,kidney,disease,DICER1-related tumor predisposition;neoplasm,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,10206,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216;MONDO:0005070,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780614,,,train,sda-all,samples/GSE289001/GSM8780614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8780615,kidney,disease,DICER1-related tumor predisposition;neoplasm,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,5485,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216;MONDO:0005070,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780615,,,train,sda-all,samples/GSE289001/GSM8780615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM8780616,kidney,disease,DICER1-related tumor predisposition;neoplasm,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,6689,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216;MONDO:0005070,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780616,,,train,sda-all,samples/GSE289001/GSM8780616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8780617,kidney,disease,DICER1-related tumor predisposition;neoplasm,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,8275,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216;MONDO:0005070,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780617,,,train,sda-all,samples/GSE289001/GSM8780617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM8780618,kidney,disease,DICER1-related tumor predisposition;neoplasm,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,8313,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216;MONDO:0005070,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780618,,,train,sda-all,samples/GSE289001/GSM8780618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8780619,kidney,disease,DICER1-related tumor predisposition;neoplasm,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,11039,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216;MONDO:0005070,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780619,,,train,sda-all,samples/GSE289001/GSM8780619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM8780620,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,7472,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780620,,,train,sda-all,samples/GSE289001/GSM8780620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.8}",,
GSM8780621,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,9254,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,HDT tumor,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780621,,,train,sda-all,samples/GSE289001/GSM8780621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8780622,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,8305,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,HDT tumor,luna,adult,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780622,,,train,sda-all,samples/GSE289001/GSM8780622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM8780623,kidney,disease,DICER1-related tumor predisposition;neoplasm,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,12865,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216;MONDO:0005070,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780623,,,train,sda-all,samples/GSE289001/GSM8780623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8780624,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,14708,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780624,,,train,sda-all,samples/GSE289001/GSM8780624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM8780625,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,6949,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780625,,,train,sda-all,samples/GSE289001/GSM8780625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.84}",,
GSM8780626,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,9865,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,adult,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780626,,,train,sda-all,samples/GSE289001/GSM8780626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM8780627,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,False,,10663,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,not stated,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780627,,,train,sda-all,samples/GSE289001/GSM8780627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM8780629,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,False,,8896,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,not stated,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780629,,,train,sda-all,samples/GSE289001/GSM8780629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8780630,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,14517,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780630,,,train,sda-all,samples/GSE289001/GSM8780630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.78}",,
GSM8780631,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,11173,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,adult,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780631,,,train,sda-all,samples/GSE289001/GSM8780631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM8780632,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,4025,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780632,,,train,sda-all,samples/GSE289001/GSM8780632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM8780633,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,11253,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780633,,,train,sda-all,samples/GSE289001/GSM8780633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8780634,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,15646,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780634,,,train,sda-all,samples/GSE289001/GSM8780634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM8780635,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,20313,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780635,,,train,sda-all,samples/GSE289001/GSM8780635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM8780636,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,9536,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780636,,,train,sda-all,samples/GSE289001/GSM8780636,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM8780637,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,14478,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780637,,,train,sda-all,samples/GSE289001/GSM8780637,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.63}",,
GSM8780638,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,3300,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Renal tumor,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,HDT tumor,luna,not stated,,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM8780638,,,train,sda-all,samples/GSE289001/GSM8780638,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM9327877,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,6647,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327877,,,train,sda-all,samples/GSE289001/GSM9327877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9327878,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,9557,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327878,,,train,sda-all,samples/GSE289001/GSM9327878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9327879,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,7764,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327879,,,train,sda-all,samples/GSE289001/GSM9327879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.43}",disease_status;life_stage,low_confidence_annotation
GSM9327880,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,False,,8597,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327880,,,train,sda-all,samples/GSE289001/GSM9327880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9327881,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,9687,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327881,,,train,sda-all,samples/GSE289001/GSM9327881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM9327882,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,9468,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327882,,,train,sda-all,samples/GSE289001/GSM9327882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM9327883,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,False,,6940,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327883,,,train,sda-all,samples/GSE289001/GSM9327883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9327885,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,False,,8487,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327885,,,train,sda-all,samples/GSE289001/GSM9327885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM9327886,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,9290,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327886,,,train,sda-all,samples/GSE289001/GSM9327886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9327887,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,6563,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327887,,,train,sda-all,samples/GSE289001/GSM9327887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9327888,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,8063,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327888,,,train,sda-all,samples/GSE289001/GSM9327888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9327889,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,9083,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327889,,,train,sda-all,samples/GSE289001/GSM9327889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM9327890,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,4266,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327890,,,train,sda-all,samples/GSE289001/GSM9327890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM9327891,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,10366,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327891,,,train,sda-all,samples/GSE289001/GSM9327891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9327892,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,5654,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327892,,,train,sda-all,samples/GSE289001/GSM9327892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9327893,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,10175,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327893,,,train,sda-all,samples/GSE289001/GSM9327893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9327894,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,7897,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327894,,,train,sda-all,samples/GSE289001/GSM9327894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9327895,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,7614,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327895,,,train,sda-all,samples/GSE289001/GSM9327895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM9327896,kidney,disease,DICER1-related tumor predisposition,kidney,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,186042,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216,mondo_predicate,,control,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327896,,,train,sda-all,samples/GSE289001/GSM9327896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9327897,kidney,perturbation,,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,331230,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,,luna,,control,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327897,,,train,sda-all,samples/GSE289001/GSM9327897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.62}",disease_status,low_confidence_annotation
GSM9327898,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,10839,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,Dicer1 mutant,luna,adult,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327898,,,train,sda-all,samples/GSE289001/GSM9327898,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9327899,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,15589,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,Dicer1 mutant,luna,adult,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327899,,,train,sda-all,samples/GSE289001/GSM9327899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.62}",,
GSM9327900,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,17052,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,Dicer1 mutant,luna,adult,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327900,,,train,sda-all,samples/GSE289001/GSM9327900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.72}",,
GSM9327901,kidney,disease,DICER1-related tumor predisposition,kidney,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,9922,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216,mondo_predicate (Luna: perturbation),,Dicer1 mutant,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327901,,,train,sda-all,samples/GSE289001/GSM9327901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.78}",disease_status,low_confidence_annotation
GSM9327902,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,11013,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,Dicer1 mutant,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327902,,,train,sda-all,samples/GSE289001/GSM9327902,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM9327903,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,9292,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,Dicer1 mutant,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327903,,,train,sda-all,samples/GSE289001/GSM9327903,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9327904,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,15942,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,Dicer1 mutant,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327904,,,train,sda-all,samples/GSE289001/GSM9327904,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9327905,kidney,disease,kidney neoplasm;DICER1-related tumor predisposition;sarcoma,kidney,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,16761,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0100216;MONDO:0005089,luna,,Dicer1 mutant,luna,adult,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327905,,,train,sda-all,samples/GSE289001/GSM9327905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 0.85}",,
GSM9327906,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,False,,15449,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,Dicer1 mutant,luna,adult,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327906,,,train,sda-all,samples/GSE289001/GSM9327906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9327907,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,8956,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,Dicer1 mutant,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327907,,,train,sda-all,samples/GSE289001/GSM9327907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9327908,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,False,,10359,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,Dicer1 mutant,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327908,,,train,sda-all,samples/GSE289001/GSM9327908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9327909,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,11985,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,Dicer1 mutant,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327909,,,train,sda-all,samples/GSE289001/GSM9327909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM9327910,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,False,,9067,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,Dicer1 mutant,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327910,,,train,sda-all,samples/GSE289001/GSM9327910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9327911,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,8147,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,Dicer1 mutant,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327911,,,train,sda-all,samples/GSE289001/GSM9327911,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM9327912,kidney,disease,DICER1-related tumor predisposition;neoplastic disease or syndrome,kidney,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,6355,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216;MONDO:0023370,mondo_predicate (Luna: perturbation),,Dicer1 mutant,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327912,,,train,sda-all,samples/GSE289001/GSM9327912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.71}",disease_status,low_confidence_annotation
GSM9327913,kidney,disease,DICER1-related tumor predisposition,kidney,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,11307,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216,mondo_predicate (Luna: perturbation),,Dicer1 mutant,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327913,,,train,sda-all,samples/GSE289001/GSM9327913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM9327914,kidney,disease,DICER1-related tumor predisposition,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,False,,10663,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216,mondo_predicate (Luna: perturbation),,Dicer1 mutant,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327914,,,train,sda-all,samples/GSE289001/GSM9327914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9327915,kidney,disease,DICER1-related tumor predisposition,kidney,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,False,,10325,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216,mondo_predicate (Luna: perturbation),,Dicer1 mutant,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327915,,,train,sda-all,samples/GSE289001/GSM9327915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9327916,kidney,disease,DICER1-related tumor predisposition,kidney,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,8470,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216,mondo_predicate (Luna: perturbation),,Dicer1 mutant,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327916,,,train,sda-all,samples/GSE289001/GSM9327916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",disease_status;life_stage,low_confidence_annotation
GSM9327917,kidney,disease,DICER1-related tumor predisposition,kidney,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,9659,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,Kidney,MONDO:0100216,mondo_predicate (Luna: perturbation),,Dicer1 mutant,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327917,,,train,sda-all,samples/GSE289001/GSM9327917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.48}",disease_status;life_stage,low_confidence_annotation
GSM9327918,kidney,disease,kidney neoplasm;mesenchymal cell neoplasm;DICER1-related tumor predisposition,kidney,tumour tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,False,,162445,Spatial single cell transcriptomic analysis of a lineage-traceable mouse model of DICER1 Syndrome informs tumor developmental hierarchy [Xenium],GSE289001,GSE289001,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,,MONDO:0021163;MONDO:0002616;MONDO:0100216,luna,,Dicer1 mutant,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,379,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41912509,,GSM9327918,,,train,sda-all,samples/GSE289001/GSM9327918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8782649,brain,disease,carcinoma,hindbrain,tumour tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E-like (heuristic),3285,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,GSE289052,GSE289052,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002028,Brain,MONDO:0004993,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,luna,neonatal or infant,17 days,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,19465,counts,um,1.0,verified,4.514240596958139,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42629571,,GSM8782649,,,train,sda-all,samples/GSE289052/GSM8782649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8782650,brain,disease,carcinoma,forebrain,tumour tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E-like (heuristic),2218,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,GSE289052,GSE289052,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,Brain,MONDO:0004993,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,luna,neonatal or infant,14 days,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,19465,counts,um,1.0,verified,3.02389135308523,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42629571,,GSM8782650,,,train,sda-all,samples/GSE289052/GSM8782650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8782651,brain,disease,carcinoma,hindbrain,tumour tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E-like (heuristic),1679,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,GSE289052,GSE289052,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002028,Brain,MONDO:0004993,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,luna,neonatal or infant,14 days,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,19465,counts,um,1.0,verified,4.554767874455806,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42629571,,GSM8782651,,,train,sda-all,samples/GSE289052/GSM8782651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8782652,brain,disease,carcinoma,forebrain,tumour tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E-like (heuristic),3208,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,GSE289052,GSE289052,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,Brain,MONDO:0004993,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,luna,neonatal or infant,14 days,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,19465,counts,um,1.0,verified,3.0077793507251864,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42629571,,GSM8782652,,,train,sda-all,samples/GSE289052/GSM8782652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM8782653,brain,disease,carcinoma,hindbrain,tumour tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E-like (heuristic),4003,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,GSE289052,GSE289052,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002028,Brain,MONDO:0004993,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,luna,neonatal or infant,15 days,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,19465,counts,um,1.0,verified,4.510044349652199,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42629571,,GSM8782653,,,train,sda-all,samples/GSE289052/GSM8782653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8782654,brain,disease,carcinoma,brain,tumour tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,grayscale bright-field (heuristic),4096,Overactivation of SHH signaling during embryonic choroid plexus development induces a cascade of dedifferentiation and carcinoma formation.,GSE289052,GSE289052,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0004993,luna,,hGFAP-cre::lsl-MYCN::lsl-Gli2(N)::Tp5fl/fl,luna,neonatal or infant,15 days,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium,,,spot,19465,counts,um,1.0,verified,4.516320559751822,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42629571,,GSM8782654,,,train,sda-all,samples/GSE289052/GSM8782654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.9500000000000001, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8782667,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,39707,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,Cardiomyocytes only; 7 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,36536,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782667,,,train,sda-all,samples/GSE289054/GSM8782667,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8782668,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,41616,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,RADA16+Cardiomyocyte injection; 7 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,35049,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782668,,,train,sda-all,samples/GSE289054/GSM8782668,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8782669,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,42604,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,RADA16+Cardiomyocyte injection; 7 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,34854,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782669,,,train,sda-all,samples/GSE289054/GSM8782669,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8782670,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,39823,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,Cardiomyocytes only; 7 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,34967,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782670,,,train,sda-all,samples/GSE289054/GSM8782670,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8782671,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,44089,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,Cardiomyocytes only; 7 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,36084,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782671,,,train,sda-all,samples/GSE289054/GSM8782671,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8782672,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,42506,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,RADA16+Cardiomyocyte injection; 21 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,40004,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782672,,,train,sda-all,samples/GSE289054/GSM8782672,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8782673,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,41761,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,RADA16+Cardiomyocyte injection; 7 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,27569,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782673,,,train,sda-all,samples/GSE289054/GSM8782673,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM8782674,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,44944,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,RADA16+Cardiomyocyte injection; 7 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,29035,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782674,,,train,sda-all,samples/GSE289054/GSM8782674,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8782675,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,44938,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,RADA16+Cardiomyocyte injection; 21 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,37773,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782675,,,train,sda-all,samples/GSE289054/GSM8782675,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8782676,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,42626,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,Cardiomyocytes only; 21 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,37558,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782676,,,train,sda-all,samples/GSE289054/GSM8782676,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.78}",,
GSM8782677,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,41702,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,Cardiomyocytes only; 21 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,39236,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782677,,,train,sda-all,samples/GSE289054/GSM8782677,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.85}",,
GSM8782678,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,43736,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,Cardiomyocytes only; 21 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,37954,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782678,,,train,sda-all,samples/GSE289054/GSM8782678,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8782679,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,44927,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,RADA16+Cardiomyocyte injection; 21 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,36136,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782679,,,train,sda-all,samples/GSE289054/GSM8782679,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8782680,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,44698,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,RADA16+Cardiomyocyte injection; 21 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,36129,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782680,,,train,sda-all,samples/GSE289054/GSM8782680,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8782681,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,43958,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,Cardiomyocytes only; 21 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,36385,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782681,,,train,sda-all,samples/GSE289054/GSM8782681,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM8782682,heart,perturbation,,myocardium,xenograft,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seqV2,False,,46611,Flexible Nanoelectronics Show Reduction of Arrhythmogenesis in Transplanted Human Cardiomyocytes,GSE289054,GSE289054,9606,Homo sapiens;Rattus norvegicus,9606;10116,,True,True,GEO organism field,Homo sapiens/Rattus norvegicus xenograft,,luna,UBERON:0002349,Left Ventricular Anterior Wall,,luna,,Cardiomyocytes only; 21 day post-injection harvest,luna,not stated,,not stated,,,,fresh frozen,Fresh-Frozen,release v3,sequencing-based,Slide-seqV2,,,bead,38592,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,41100583,,GSM8782682,,,train,sda-all,samples/GSE289054/GSM8782682,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM8785666,placenta,normal,,placenta,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,2599,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",GSE289170,GSE289170+GSE289175,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,Semi-allogeneic,age rule: embryonic day,embryonic,12.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.687767690490729,platform_constant,4.687767690490729,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785666,,,test,hesrt,samples/GSE289170/GSM8785666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8785667,placenta,normal,,placenta,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,3660,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",GSE289170,GSE289170+GSE289175,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,Semi-allogeneic,age rule: embryonic day,embryonic,12.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.677544809840248,platform_constant,4.677544809840248,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785667,,,test,hesrt,samples/GSE289170/GSM8785667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8785668,placenta,normal,,placenta,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,2294,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",GSE289170,GSE289170+GSE289175,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,Semi-allogeneic,age rule: embryonic day,embryonic,12.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.68096668944405,platform_constant,4.68096668944405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785668,,,test,hesrt,samples/GSE289170/GSM8785668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8785669,placenta,normal,,placenta,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,2814,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",GSE289170,GSE289170+GSE289175,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,Syngeneic,age rule: embryonic day,embryonic,12.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.682879072842189,platform_constant,4.682879072842189,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785669,,,test,hesrt,samples/GSE289170/GSM8785669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8785670,placenta,normal,,placenta,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,3569,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",GSE289170,GSE289170+GSE289175,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,Syngeneic,age rule: embryonic day,embryonic,12.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.673254012373388,platform_constant,4.673254012373388,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785670,,,test,hesrt,samples/GSE289170/GSM8785670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8785671,placenta,normal,,placenta,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,2898,"Multi-omics analysis identifies erythroid cells as the major population in mouse placentas expressing the MHC class II antigen presentation, chemokine, and antibacterial immune response genes [Spatial Transcriptomics]",GSE289170,GSE289170+GSE289175,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,Syngeneic,age rule: embryonic day,embryonic,12.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.677618957868,platform_constant,4.677618957868,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41058694,,GSM8785671,,,test,hesrt,samples/GSE289170/GSM8785671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8788015,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,13976,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,GSE289263,GSE289263,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999922472606988,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788015,,,train,sda-all,samples/GSE289263/GSM8788015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.35000000000000003, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM8788016,skin,perturbation,,skin of body,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24291,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,GSE289263,GSE289263,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999850711988975,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788016,,,train,sda-all,samples/GSE289263/GSM8788016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.39, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8788017,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,4835,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,GSE289263,GSE289263,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999778813259407,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788017,,,train,sda-all,samples/GSE289263/GSM8788017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.42, ""life_stage"": 0.8200000000000001}",uberon,low_confidence_annotation
GSM8788018,skin,perturbation,,skin of body,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1949,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,GSE289263,GSE289263,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000245249896736,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788018,,,train,sda-all,samples/GSE289263/GSM8788018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.37, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM8788019,skin,perturbation,,skin of body,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6918,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,GSE289263,GSE289263,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999882449747267,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788019,,,train,sda-all,samples/GSE289263/GSM8788019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.33, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8788020,skin,perturbation,,skin of body,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,11970,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,GSE289263,GSE289263,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997353875102907,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788020,,,train,sda-all,samples/GSE289263/GSM8788020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.31, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8788021,skin,perturbation,,skin of body,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10239,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,GSE289263,GSE289263,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000160462130937,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788021,,,train,sda-all,samples/GSE289263/GSM8788021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 0.35000000000000003, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8788022,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10310,The mechanotransducer Piezo1 coordinates metabolism and inflammation to promote skin regeneration.,GSE289263,GSE289263,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999919732134667,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40715139,,GSM8788022,,,train,sda-all,samples/GSE289263/GSM8788022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 0.37, ""life_stage"": 0.98}",disease_status;uberon,low_confidence_annotation
GSM8788640,other,normal,,,primary tissue,Schmidtea mediterranea,freshwater planarian,not stated,unknown,Slide-seq,Slide-seqV2,False,,31731,Syrah: a pipeline to maximize spatial transcriptomics data output,GSE289299,GSE289299,79327,Schmidtea mediterranea,79327,,False,False,GEO organism field,Schmidtea mediterranea,,luna,,worm fragments,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,Slide-seqV2,,,bead,21923,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42081452,,SS-GSM8788640,same_section_within_series,GSM8788641,train,sda-all,samples/GSE289299/GSM8788640,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 0.89, ""disease_status"": 0.52, ""uberon"": NaN, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM8789932,tonsil,disease,oropharynx squamous cell carcinoma,tonsil,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4925,Intratumoral spatiotemporal heterogeneity of HPV status in HPV-associated oropharyngeal squamous cell carcinoma with clinical record,GSE289363,GSE289363,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002372,Tonsil,MONDO:0044704,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,10.376011331802593,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41943047,,GSM8789932,,,train,sda-all,samples/GSE289363/GSM8789932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8789933,tonsil,disease,oropharynx squamous cell carcinoma,tonsil,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4962,Intratumoral spatiotemporal heterogeneity of HPV status in HPV-associated oropharyngeal squamous cell carcinoma with clinical record,GSE289363,GSE289363,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002372,Tonsil,MONDO:0044704,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,8.009124991516748,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,41943047,,GSM8789933,,,train,sda-all,samples/GSE289363/GSM8789933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8789934,tonsil,disease,oropharynx squamous cell carcinoma,tonsil,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4952,Intratumoral spatiotemporal heterogeneity of HPV status in HPV-associated oropharyngeal squamous cell carcinoma with clinical record,GSE289363,GSE289363,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002372,Tonsil,MONDO:0044704,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.069156776429502,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41943047,,GSM8789934,,,train,sda-all,samples/GSE289363/GSM8789934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8795105,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3481,Granzyme K CD8⁺ T cells with tissue-resident features promote intestinal inflammation in patients with Crohn’s disease,GSE289496,GSE289496,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Inflamed small intestine,MONDO:0005011,luna,Crohn's disease,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,visium,,,spot,18085,counts,um,1.0,verified,6.965765012858335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42409960,,GSM8795105,,,train,sda-all,samples/GSE289496/GSM8795105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8797488,kidney,disease,,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),671854,Vesicles Secreted by Renal Cell Carcinoma Cells Cause Vascular Endothelial Cells to Express PSMA and Drive Tumor Progression,GSE289717,GSE289717,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney cancer,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.230933247456304,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,39936957,,GSM8797488,,,train,sda-all,samples/GSE289717/GSM8797488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8797973,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2895,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.167857284564286,platform_constant,4.167857284564286,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797973,,,train,hesrt,samples/GSE289745/GSM8797973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM8797974,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1274,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.061251358229578,platform_constant,4.061251358229578,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797974,,,train,hesrt,samples/GSE289745/GSM8797974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797975,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1514,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.103777687364363,platform_constant,4.103777687364363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797975,,,train,hesrt,samples/GSE289745/GSM8797975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM8797976,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2041,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.117953178478642,platform_constant,4.117953178478642,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797976,,,train,hesrt,samples/GSE289745/GSM8797976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797977,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2887,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.189285709426141,platform_constant,4.189285709426141,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797977,,,train,hesrt,samples/GSE289745/GSM8797977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797978,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3195,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.135672576773078,platform_constant,4.135672576773078,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797978,,,train,hesrt,samples/GSE289745/GSM8797978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797979,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2779,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.071883046523422,platform_constant,4.071883046523422,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797979,,,train,hesrt,samples/GSE289745/GSM8797979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.30000000000000004, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797980,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2063,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.135549343710302,platform_constant,4.135549343710302,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797980,,,train,hesrt,samples/GSE289745/GSM8797980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8797981,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2748,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.167567160881076,platform_constant,4.167567160881076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797981,,,train,hesrt,samples/GSE289745/GSM8797981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8797982,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2163,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.167567160881085,platform_constant,4.167567160881085,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797982,,,train,hesrt,samples/GSE289745/GSM8797982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM8797983,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4271,Cancer-induced nerve injury promotes resistance to anti-PD-1 therapy [Spatial Transcriptomics],GSE289745,GSE289745,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous squamous cell carcinoma,MONDO:0002529,luna,cutaneous squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.093146363419655,platform_constant,4.093146363419655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40836096,10.1038/s41586-025-09370-8,GSM8797983,,,train,hesrt,samples/GSE289745/GSM8797983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8801844,brain,disease,glioma,brain,xenograft,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1975,Glioma-neuronal circuit remodeling induces regional immunosuppression [visium],GSE289934,GSE289934,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0021042,luna,glioma,SB28 glioma inoculated,age rule: age with unit,adult,8–10 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.9900500119079223,platform_constant,3.9900500119079223,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404658,,GSM8801844,,,train,hesrt,samples/GSE289934/GSM8801844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8801845,brain,disease,glioma,brain,xenograft,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1782,Glioma-neuronal circuit remodeling induces regional immunosuppression [visium],GSE289934,GSE289934,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0021042,luna,glioma,SB28 glioma inoculated,age rule: age with unit,adult,8–10 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.0831800026274605,platform_constant,4.0831800026274605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404658,,GSM8801845,,,train,hesrt,samples/GSE289934/GSM8801845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8804262,head and neck,disease,oropharyngeal carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,28962,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999070017359676,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804262,,,train,sda-all,samples/GSE290041/GSM8804262,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8804263,head and neck,disease,oropharyngeal carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,52757,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999823217442545,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804263,,,train,sda-all,samples/GSE290041/GSM8804263,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804264,head and neck,disease,oropharyngeal carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,94727,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000117744024491,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804264,,,train,sda-all,samples/GSE290041/GSM8804264,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804265,head and neck,disease,oropharyngeal carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,57680,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999882214369847,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804265,,,train,sda-all,samples/GSE290041/GSM8804265,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8804266,head and neck,disease,oropharyngeal carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,97785,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804266,,,train,sda-all,samples/GSE290041/GSM8804266,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804267,head and neck,disease,oropharyngeal carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,98303,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000235682300259,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804267,,,train,sda-all,samples/GSE290041/GSM8804267,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804268,head and neck,disease,oropharyngeal carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,74147,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999911598302687,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804268,,,train,sda-all,samples/GSE290041/GSM8804268,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804269,head and neck,disease,oropharyngeal carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38029,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000073659398939,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804269,,,train,sda-all,samples/GSE290041/GSM8804269,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804270,head and neck,disease,oropharyngeal carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,146569,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997056052755534,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804270,,,train,sda-all,samples/GSE290041/GSM8804270,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8804271,head and neck,disease,oropharyngeal carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,77326,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804271,,,train,sda-all,samples/GSE290041/GSM8804271,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM8804272,head and neck,disease,oropharyngeal carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,37874,single-cell spatial analysis reveals molecular mechanisms underlying immune cell organization and cancer cell heterogeneity in HPV-associated oropharyngeal carcinoma [xenium],GSE290041,GSE290041,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,orophyngeal carcinoma,MONDO:0044926,luna,,treatment-naïve,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999862693944803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42288489,,GSM8804272,,,train,sda-all,samples/GSE290041/GSM8804272,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8806098,heart,disease,diabetes mellitus,heart,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,fluorescence: immunofluorescence,2223,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],GSE290094,GSE290094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005015,luna,,Db/db,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.2800337631637735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41203872,,GSM8806098,,,train,sda-all,samples/GSE290094/GSM8806098,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8806099,heart,disease,diabetes mellitus,heart,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,fluorescence: immunofluorescence,1561,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],GSE290094,GSE290094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005015,luna,,Db/db,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.275584480253784,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41203872,,GSM8806099,,,train,sda-all,samples/GSE290094/GSM8806099,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8806100,heart,disease,diabetes mellitus,heart,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1009,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],GSE290094,GSE290094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005015,luna,,control,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.364756320569281,platform_constant,4.364756320569281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41203872,,GSM8806100,,,train,hesrt,samples/GSE290094/GSM8806100,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM8806101,heart,disease,diabetes mellitus,heart,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1127,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],GSE290094,GSE290094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005015,luna,,control,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.088645223265412,platform_constant,5.088645223265412,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41203872,,GSM8806101,,,train,hesrt,samples/GSE290094/GSM8806101,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM8806102,heart,disease,diabetes mellitus,heart,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,fluorescence: immunofluorescence,1947,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],GSE290094,GSE290094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005015,luna,,db/db,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.274628032189409,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41203872,,GSM8806102,,,train,sda-all,samples/GSE290094/GSM8806102,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8806103,heart,disease,diabetes mellitus,heart,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1668,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],GSE290094,GSE290094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005015,luna,type 2 diabetes,diabetic,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.0895058376264775,platform_constant,5.0895058376264775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41203872,,GSM8806103,,,train,hesrt,samples/GSE290094/GSM8806103,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM8806104,heart,disease,diabetes mellitus,heart,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1792,Spatial Transcriptomic Profiling of the Type 2 Diabetic Coronary Microcirculation Reveals Heterogeneity Varied by Regions of the Heart [Visium],GSE290094,GSE290094,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,heart,MONDO:0005015,luna,type 2 diabetes,diabetic,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.089294231783067,platform_constant,5.089294231783067,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41203872,,GSM8806104,,,train,hesrt,samples/GSE290094/GSM8806104,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM8809852,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,336372,Spatial Zonation of Pro- and Anti-inflammatory Tumor Macrophages After Anti-CD40,GSE290287,GSE290287,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,,agonistic aCD40 treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19040,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41176316,,GSM8809852,,,test,hesrt,samples/GSE290287/GSM8809852,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8810740,liver,disease,visceral leishmaniasis,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1087,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],GSE290324,GSE290324,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005445,luna,,L. donovani infected,age rule: age with unit,not stated,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32291,counts,pixel,4.299577772823785,platform_constant,4.299577772823785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810740,,,train,hesrt,samples/GSE290324/GSM8810740,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8810741,liver,disease,visceral leishmaniasis,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1446,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],GSE290324,GSE290324,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005445,luna,,L. donovani infected,age rule: age with unit,not stated,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32291,counts,pixel,4.464211333471986,platform_constant,4.464211333471986,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810741,,,train,hesrt,samples/GSE290324/GSM8810741,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8810742,liver,disease,visceral leishmaniasis,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1769,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],GSE290324,GSE290324,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0005445,luna,,L. donovani infected,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32291,counts,um,1.0,verified,4.304623781512494,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41862629,,GSM8810742,,,train,sda-all,samples/GSE290324/GSM8810742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8810743,liver,disease,visceral leishmaniasis,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1790,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],GSE290324,GSE290324,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005445,luna,,L. donovani infected,age rule: age with unit,not stated,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32291,counts,pixel,4.64780702214519,platform_constant,4.64780702214519,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810743,,,train,hesrt,samples/GSE290324/GSM8810743,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8810744,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1198,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],GSE290324,GSE290324,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,no treatment,age rule: age with unit,not stated,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32291,counts,pixel,4.299999915960803,platform_constant,4.299999915960803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810744,,,train,hesrt,samples/GSE290324/GSM8810744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8810745,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2475,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],GSE290324,GSE290324,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,no treatment,age rule: age with unit,not stated,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32291,counts,pixel,4.6436405250137485,platform_constant,4.6436405250137485,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810745,,,train,hesrt,samples/GSE290324/GSM8810745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8810746,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1148,Ontogeny-independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis [Spatial Transcriptomics],GSE290324,GSE290324,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,no treatment,age rule: age with unit,not stated,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32291,counts,pixel,4.474716452889694,platform_constant,4.474716452889694,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41862629,,GSM8810746,,,train,hesrt,samples/GSE290324/GSM8810746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8810907,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,521212,Spatial Zonation of Pro- and Anti-inflammatory Tumor Macrophages After Anti-CD40 II,GSE290338,GSE290338,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,,24 hours post-irradiation with 12 Gy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19040,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41176316,,GSM8810907,,,train,hesrt,samples/GSE290338/GSM8810907,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.67, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8810908,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,649693,Spatial Zonation of Pro- and Anti-inflammatory Tumor Macrophages After Anti-CD40 II,GSE290338,GSE290338,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,tumor,MONDO:0005070,luna,,7 days post-irradiation with 12 Gy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19040,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41176316,,GSM8810908,,,train,hesrt,samples/GSE290338/GSM8810908,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8817228,heart,not stated,,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,97262,Dynamic responses to rejection in the transplanted human heart revealed through spatial transcriptomics,GSE290577,GSE290577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hHeart_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000142802741812,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8817228,,,train,sda-all,samples/GSE290577/GSM8817228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8817229,heart,not stated,,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,94842,Dynamic responses to rejection in the transplanted human heart revealed through spatial transcriptomics,GSE290577,GSE290577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hHeart_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999911598302687,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8817229,,,train,sda-all,samples/GSE290577/GSM8817229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8819272,breast,disease,invasive lobular breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1586,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,GSE290670,GSE290670,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Human Breast Cancer,MONDO:0005051,luna,classic ILC,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7641607199008701,platform_constant,0.7641607199008701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819272,,,train,hesrt,samples/GSE290670/GSM8819272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8819273,breast,disease,invasive lobular breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,750,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,GSE290670,GSE290670,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Human Breast Cancer,MONDO:0005051,luna,pleomorphic ILC,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7641607199008701,platform_constant,0.7641607199008701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819273,,,train,hesrt,samples/GSE290670/GSM8819273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8819274,breast,disease,invasive lobular breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2371,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,GSE290670,GSE290670,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Human Breast Cancer,MONDO:0005051,luna,pleomorphic ILC,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7641607199008701,platform_constant,0.7641607199008701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819274,,,train,hesrt,samples/GSE290670/GSM8819274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8819275,breast,disease,invasive lobular breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1694,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,GSE290670,GSE290670,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Human Breast Cancer,MONDO:0005051,luna,pleomorphic ILC,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7641607199008701,platform_constant,0.7641607199008701,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819275,,,train,hesrt,samples/GSE290670/GSM8819275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM8819276,breast,disease,invasive lobular breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1002,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,GSE290670,GSE290670,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Human Breast Cancer,MONDO:0005051,luna,classic ILC,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7648980573556853,platform_constant,0.7648980573556853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819276,,,train,hesrt,samples/GSE290670/GSM8819276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8819277,breast,disease,invasive lobular breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1409,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,GSE290670,GSE290670,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Human Breast Cancer,MONDO:0005051,luna,classic ILC,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7648980573556853,platform_constant,0.7648980573556853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819277,,,train,hesrt,samples/GSE290670/GSM8819277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8819278,breast,disease,invasive lobular breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1552,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,GSE290670,GSE290670,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Human Breast Cancer,MONDO:0005051,luna,pleomorphic ILC,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7936507936507936,platform_constant,0.7936507936507936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819278,,,train,hesrt,samples/GSE290670/GSM8819278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8819279,breast,disease,invasive lobular breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2119,Spatial Transcriptome Profiling Reveals Molecular Features of  Invasive Lobular Carcinoma in Breast Cancer.,GSE290670,GSE290670,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Human Breast Cancer,MONDO:0005051,luna,classic ILC,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.7648980573556853,platform_constant,0.7648980573556853,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8819279,,,train,hesrt,samples/GSE290670/GSM8819279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8820300,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,4177076,Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration [Spatial transcriptomics],GSE290724,GSE290724,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,GBM patient brain tissue,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40381621,,GSM8820300,,,val,sda-all,samples/GSE290724/GSM8820300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8820301,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,6684118,Neurodevelopmental hijacking of oligodendrocyte lineage programs drives glioblastoma infiltration [Spatial transcriptomics],GSE290724,GSE290724,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,GBM patient brain tissue,MONDO:0018177,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,40381621,,GSM8820301,,,val,sda-all,samples/GSE290724/GSM8820301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8821265,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,BMK S1000,BMKMANU S1000,True,H&E,12315,Salmonella typhimurium targets distal colonocytes to trigger infection [Spatial Transcriptomics],GSE290762,GSE290762,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,,luna,,uninfected,age rule: age with unit,juvenile,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,BMKMANU S1000,,,,54838,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41277366,,GSM8821265,,,train,hesrt,samples/GSE290762/GSM8821265,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8821266,colon,disease,infectious disease,colon,primary tissue,Mus musculus,house mouse,adult,female,BMK S1000,BMKMANU S1000,True,H&E,14864,Salmonella typhimurium targets distal colonocytes to trigger infection [Spatial Transcriptomics],GSE290762,GSE290762,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0005550,luna,,infected by Salmonella,age rule: age with unit,juvenile,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,BMKMANU S1000,,,,54838,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41277366,,GSM8821266,,,train,hesrt,samples/GSE290762/GSM8821266,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8821267,colon,disease,infectious disease,colon,primary tissue,Mus musculus,house mouse,adult,female,BMK S1000,BMKMANU S1000,True,H&E,16259,Salmonella typhimurium targets distal colonocytes to trigger infection [Spatial Transcriptomics],GSE290762,GSE290762,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0005550,luna,,infected by Salmonella,age rule: age with unit,juvenile,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,BMKMANU S1000,,,,54838,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41277366,,GSM8821267,,,train,hesrt,samples/GSE290762/GSM8821267,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8821268,colon,disease,infectious disease,colon,primary tissue,Mus musculus,house mouse,adult,female,BMK S1000,BMKMANU S1000,True,H&E,17734,Salmonella typhimurium targets distal colonocytes to trigger infection [Spatial Transcriptomics],GSE290762,GSE290762,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,colon,MONDO:0005550,luna,,infected by Salmonella,age rule: age with unit,juvenile,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,BMKMANU S1000,,,,54838,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41277366,,GSM8821268,,,train,hesrt,samples/GSE290762/GSM8821268,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8825744,breast,disease,invasive breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Other,DynaSpatial,True,H&E,2172,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,GSE290924,GSE290924,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0006256,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,DynaSpatial,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825744,,,train,hesrt,samples/GSE290924/GSM8825744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8825745,breast,disease,invasive breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Other,DynaSpatial,True,H&E,2111,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,GSE290924,GSE290924,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0006256,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,DynaSpatial,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825745,,,train,hesrt,samples/GSE290924/GSM8825745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8825746,breast,disease,invasive breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Other,DynaSpatial,True,H&E,2479,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,GSE290924,GSE290924,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0006256,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,DynaSpatial,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825746,,,train,hesrt,samples/GSE290924/GSM8825746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8825747,breast,disease,invasive breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Other,DynaSpatial,True,H&E,2387,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,GSE290924,GSE290924,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0006256,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,DynaSpatial,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825747,,,train,hesrt,samples/GSE290924/GSM8825747,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8825748,breast,disease,invasive breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Other,DynaSpatial,True,H&E,2465,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,GSE290924,GSE290924,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0006256,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,DynaSpatial,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825748,,,train,hesrt,samples/GSE290924/GSM8825748,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8825749,breast,disease,invasive breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Other,DynaSpatial,True,H&E,1658,Integrative spatially-resolved multi-omics analysis reveals metabolic evolution of the transition to invasive breast cancer,GSE290924,GSE290924,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0006256,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,DynaSpatial,,,,36601,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8825749,,,train,hesrt,samples/GSE290924/GSM8825749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8829021,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Visium HD,Visium HD,True,H&E,93248,CytoSignal Detects Locations and Dynamics of Ligand-Receptor Signaling at Cellular Resolution from Spatial Transcriptomic Data,GSE291088,GSE291088,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Whole embryo,,luna,,,age rule: embryonic day,embryonic,E12.5,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,2.990063607096558,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8829021,,,train,sda-all,samples/GSE291088/GSM8829021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8830704,embryo (whole),normal,,embryoid body,organoid,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,21784,Topological velocity inference from spatial transcriptomic data,GSE291200,GSE291200,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0014374,Embryoid Body,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,20699,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,40670711,,GSM8830704,,,train,sda-all,samples/GSE291200/GSM8830704,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8830801,breast,disease,breast cancer,breast,tumour tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,663145,Spatial transcriptomics profile of mammary gland tumours in MMTV-PyMT mouse model of breast cancer [MERFISH],GSE291210,GSE291210,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000310,FFPE Embedded Tumor,MONDO:0007254,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41781391,,GSM8830801,,,train,sda-all,samples/GSE291210/GSM8830801,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM8830802,breast,disease,breast cancer,breast,tumour tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,513963,Spatial transcriptomics profile of mammary gland tumours in MMTV-PyMT mouse model of breast cancer [MERFISH],GSE291210,GSE291210,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000310,FFPE Embedded Tumor,MONDO:0007254,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41781391,,GSM8830802,,,train,sda-all,samples/GSE291210/GSM8830802,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8830803,breast,disease,breast cancer,breast,tumour tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,786165,Spatial transcriptomics profile of mammary gland tumours in MMTV-PyMT mouse model of breast cancer [MERFISH],GSE291210,GSE291210,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000310,FFPE Embedded Tumor,MONDO:0007254,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41781391,,GSM8830803,,,train,sda-all,samples/GSE291210/GSM8830803,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8831617,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,484917,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su001 Post Tumor 1 rep 1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999926114197885,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831617,,,train,sda-all,samples/GSE291246/GSM8831617,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.66, ""disease_status"": 0.9500000000000001, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8831627,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,480219,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su001 Post Tumor 1 rep 2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000014785025726,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831627,,,train,sda-all,samples/GSE291246/GSM8831627,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8831637,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,70598,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su005 Post Tumor 1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,533,counts,um,1.0,verified,0.4999734857412208,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831637,,,train,sda-all,samples/GSE291246/GSM8831637,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8831638,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,15087,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su007 Post Tumor 1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,527,counts,um,1.0,verified,0.5000609013398294,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831638,,,train,sda-all,samples/GSE291246/GSM8831638,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM8831639,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16562,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su002 Pre Tumor 1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,497,counts,um,1.0,verified,0.5000185154707044,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831639,,,train,sda-all,samples/GSE291246/GSM8831639,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.91, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8831640,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10137,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su006 Pre Tumor 1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,526,counts,um,1.0,verified,0.5000068194217131,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831640,,,train,sda-all,samples/GSE291246/GSM8831640,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8831641,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,62334,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su005 Post Tumor 2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500006867188573,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831641,,,train,sda-all,samples/GSE291246/GSM8831641,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8831642,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,69023,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su005 Post Tumor 3,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997768163713774,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831642,,,train,sda-all,samples/GSE291246/GSM8831642,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8831643,lymph node,disease,neoplasm,lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,217331,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,,MONDO:0005070,luna,,su005 Post Node 1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.500006867188573,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831643,,,train,sda-all,samples/GSE291246/GSM8831643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8831644,lymph node,disease,neoplasm,lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,64126,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,,MONDO:0005070,luna,,su005 Post Node 2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,532,counts,um,1.0,verified,0.500006867188573,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831644,,,train,sda-all,samples/GSE291246/GSM8831644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8831645,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,26752,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su002 Pre Tumor 2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,539,counts,um,1.0,verified,0.5000179487179487,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831645,,,train,sda-all,samples/GSE291246/GSM8831645,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.93, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8831646,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10049,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su002 Post Tumor 1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,527,counts,um,1.0,verified,0.4999829700272479,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831646,,,train,sda-all,samples/GSE291246/GSM8831646,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.91, ""disease_status"": 0.9500000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8831647,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,51534,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su007 Pre Tumor 1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000137249519626,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831647,,,train,sda-all,samples/GSE291246/GSM8831647,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.93, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8831648,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,45256,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su008 Post Tumor 1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,539,counts,um,1.0,verified,0.5000240219629375,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831648,,,train,sda-all,samples/GSE291246/GSM8831648,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.89, ""disease_status"": 0.93, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8831649,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,34270,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su008 Post Tumor 2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,535,counts,um,1.0,verified,0.49998455942904196,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831649,,,train,sda-all,samples/GSE291246/GSM8831649,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.85, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8831650,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,70943,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su008 Post Tumor 3,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999742692466035,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831650,,,train,sda-all,samples/GSE291246/GSM8831650,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.88, ""disease_status"": 0.96, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8831651,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55549,Induced B Cell Receptor Diversity Predicts PD-1 Blockade Immunotherapy Response,GSE291246,GSE291246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,MONDO:0005070,luna,,su008 Post Tumor 4,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,526,counts,um,1.0,verified,0.5000137249519626,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40314973,,GSM8831651,,,train,sda-all,samples/GSE291246/GSM8831651,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8833258,uterus,perturbation,,uterus,primary tissue,Mus musculus,house mouse,not stated,female,CosMx,CosMx,False,,136343,"Site-specific phosphorylation of ERα determines sex-dependent metabolic, reproductive, and body compositional phenotypes in mice",GSE291308,GSE291308,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000995,uterus,,luna,,,luna,not stated,,extracted field,Female,,,FFPE,"formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,,,,,,VERIFIED,PASS,,,41438071,,GSM8833258,,,train,sda-all,samples/GSE291308/GSM8833258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8834057,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,64124,Xenium-based spatial transcriptomics of brains following chronic plastic exposure,GSE291378,GSE291378,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,PBS,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,503,counts,um,1.0,verified,0.4999915438965724,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8834057,,,train,sda-all,samples/GSE291378/GSM8834057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8834058,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,60707,Xenium-based spatial transcriptomics of brains following chronic plastic exposure,GSE291378,GSE291378,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,50 nm,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,502,counts,um,1.0,verified,0.49998686087544114,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8834058,,,train,sda-all,samples/GSE291378/GSM8834058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8834059,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,61914,Xenium-based spatial transcriptomics of brains following chronic plastic exposure,GSE291378,GSE291378,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,500 nm,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,534,counts,um,1.0,verified,0.5000144472880376,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8834059,,,train,sda-all,samples/GSE291378/GSM8834059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8834155,liver,disease,metastatic malignant neoplasm in the liver,liver,metastasis,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,31135,Hepatic hematopoiesis hijacked by tumor metastasis promotes immunosuppression,GSE291385,GSE291385,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver metastasis,MONDO:1060297,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,30357,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8834155,,,train,sda-all,samples/GSE291385/GSM8834155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8836004,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,292151,Ontogeny of the spinal cord dorsal horn [Xenium],GSE291460,GSE291460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord,,luna,,,age rule: embryonic day,embryonic,Embryonic day 16.5,not stated,,,,,,release v3,imaging-based,xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49999182186941166,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836004,,,train,sda-all,samples/GSE291460/GSM8836004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM8836005,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,173767,Ontogeny of the spinal cord dorsal horn [Xenium],GSE291460,GSE291460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord,,luna,,,age rule: embryonic day,embryonic,Embryonic day 16.5,not stated,,,,,,release v3,imaging-based,xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000094814508343,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836005,,,train,sda-all,samples/GSE291460/GSM8836005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.84}",,
GSM8836006,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,102452,Ontogeny of the spinal cord dorsal horn [Xenium],GSE291460,GSE291460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord,,luna,,,age rule: embryonic day,embryonic,Embryonic day 16.5,not stated,,,,,,release v3,imaging-based,xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000487379437718,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836006,,,train,sda-all,samples/GSE291460/GSM8836006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.89}",,
GSM8836007,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,145727,Ontogeny of the spinal cord dorsal horn [Xenium],GSE291460,GSE291460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord,,luna,,,age rule: embryonic day,embryonic,Embryonic day 16.5,not stated,,,,,,release v3,imaging-based,xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000329380764164,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836007,,,train,sda-all,samples/GSE291460/GSM8836007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM8836008,spinal cord,perturbation,,spinal cord,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,175303,Ontogeny of the spinal cord dorsal horn [Xenium],GSE291460,GSE291460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord,,luna,,,age rule: embryonic day,embryonic,Embryonic day 16.5,not stated,,,,,,release v3,imaging-based,Xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000025883936429,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836008,,,train,sda-all,samples/GSE291460/GSM8836008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8836009,spinal cord,perturbation,,spinal cord,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,106081,Ontogeny of the spinal cord dorsal horn [Xenium],GSE291460,GSE291460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord,,luna,,,age rule: embryonic day,embryonic,Embryonic day 16.5,not stated,,,,,,release v3,imaging-based,Xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000028191249436,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836009,,,train,sda-all,samples/GSE291460/GSM8836009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM8836010,spinal cord,perturbation,,spinal cord,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,112750,Ontogeny of the spinal cord dorsal horn [Xenium],GSE291460,GSE291460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord,,luna,,,age rule: embryonic day,embryonic,Embryonic day 16.5,not stated,,,,,,release v3,imaging-based,Xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000047749411091,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836010,,,train,sda-all,samples/GSE291460/GSM8836010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8836011,spinal cord,perturbation,,spinal cord,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,151641,Ontogeny of the spinal cord dorsal horn [Xenium],GSE291460,GSE291460,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,Spinal cord,,luna,,,age rule: embryonic day,embryonic,Embryonic day 16.5,not stated,,,,,,release v3,imaging-based,Xenium,mEmbryonic_spinal_cord_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000051754476762,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41505538,,GSM8836011,,,train,sda-all,samples/GSE291460/GSM8836011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8840044,lung,disease,lung neoplasm,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,74276,KRAS G12C inhibition combined with CD47 and immune checkpoint blockage overcomes intrinsic resistance to concomitant KRAS G12C and immune checkpoint inhibitor therapy,GSE291687,GSE291687,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0021117,luna,,anti-Cd47ab; Combination of anti-Cd47ab and Kras-inhibitor,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,0.9361769020351006,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40885190,,GSM8840044,,,train,sda-all,samples/GSE291687/GSM8840044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8840045,lung,disease,lung neoplasm,lung,xenograft,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,88131,KRAS G12C inhibition combined with CD47 and immune checkpoint blockage overcomes intrinsic resistance to concomitant KRAS G12C and immune checkpoint inhibitor therapy,GSE291687,GSE291687,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0021117,luna,,no-treatment; Kras-inhibitor,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,0.701440917937038,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40885190,,GSM8840045,,,train,sda-all,samples/GSE291687/GSM8840045,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.58, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8840046,brain,disease,,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,133986,Xenium data for a comparison of spatial transcriptomics technologies for medulloblastoma cryosections,GSE291688,GSE291688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain with Medulloblastoma,,luna,Medulloblastoma,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499991935483871,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40542418,,GSM8840046,,,val,sda-all,samples/GSE291688/GSM8840046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8840047,brain,disease,,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,145016,Xenium data for a comparison of spatial transcriptomics technologies for medulloblastoma cryosections,GSE291688,GSE291688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain with Medulloblastoma,,luna,Medulloblastoma,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000096193689695,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40542418,,GSM8840047,,,val,sda-all,samples/GSE291688/GSM8840047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8840048,brain,disease,,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,211673,Xenium data for a comparison of spatial transcriptomics technologies for medulloblastoma cryosections,GSE291688,GSE291688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain with Medulloblastoma,,luna,Medulloblastoma,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000049113769317,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40542418,,GSM8840048,,,val,sda-all,samples/GSE291688/GSM8840048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8840049,brain,disease,,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,262183,Xenium data for a comparison of spatial transcriptomics technologies for medulloblastoma cryosections,GSE291688,GSE291688,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain with Medulloblastoma,,luna,Medulloblastoma,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999954660863256,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40542418,,GSM8840049,,,val,sda-all,samples/GSE291688/GSM8840049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM8842773,brain,disease,breast cancer,brain,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2338,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,GSE291813,GSE291813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0007254,luna,,maraviroc,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.349797670553951,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842773,,,train,sda-all,samples/GSE291813/GSM8842773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842774,brain,disease,breast cancer,brain,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2706,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,GSE291813,GSE291813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0007254,luna,,maraviroc,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.339880883338262,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842774,,,train,sda-all,samples/GSE291813/GSM8842774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842775,brain,disease,breast cancer,brain,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2851,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,GSE291813,GSE291813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0007254,luna,,maraviroc,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.342633587953529,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842775,,,train,sda-all,samples/GSE291813/GSM8842775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842776,brain,disease,breast cancer,brain,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3182,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,GSE291813,GSE291813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0007254,luna,,maraviroc,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.346549366377223,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842776,,,train,sda-all,samples/GSE291813/GSM8842776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842777,brain,disease,breast cancer,brain,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2803,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,GSE291813,GSE291813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0007254,luna,,vehicle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.201005713916135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842777,,,train,sda-all,samples/GSE291813/GSM8842777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842778,brain,disease,breast cancer,brain,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3107,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,GSE291813,GSE291813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0007254,luna,,vehicle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9338548415756383,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842778,,,train,sda-all,samples/GSE291813/GSM8842778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8842779,brain,disease,breast cancer,brain,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2359,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,GSE291813,GSE291813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0007254,luna,,vehicle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9603273723237145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842779,,,train,sda-all,samples/GSE291813/GSM8842779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8842780,brain,disease,breast cancer,brain,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2997,Spatial crosstalk modeling of the tumor microenvironment uncovers CCR5-mediated glia-to-glia signaling as a key regulator of brain metastases,GSE291813,GSE291813,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0007254,luna,,vehicle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9987238887256256,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40960488,,GSM8842780,,,train,sda-all,samples/GSE291813/GSM8842780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8850433,skin,disease,Schnitzler syndrome,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,22568,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,GSE292123,GSE292123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,urticarial rash,MONDO:0018304,luna,Schnitzler syndrome,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500019337871287,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850433,,,train,sda-all,samples/GSE292123/GSM8850433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850434,skin,disease,Schnitzler syndrome,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,20690,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,GSE292123,GSE292123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,urticarial rash,MONDO:0018304,luna,Schnitzler syndrome,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000195007800312,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850434,,,train,sda-all,samples/GSE292123/GSM8850434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8850435,skin,disease,Schnitzler syndrome,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,28780,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,GSE292123,GSE292123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,urticarial rash,MONDO:0018304,luna,Schnitzler syndrome,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000011474205984,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850435,,,train,sda-all,samples/GSE292123/GSM8850435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850436,skin,disease,Schnitzler syndrome,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,21603,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,GSE292123,GSE292123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,urticarial rash,MONDO:0018304,luna,Schnitzler syndrome,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.50000589066918,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850436,,,train,sda-all,samples/GSE292123/GSM8850436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850437,skin,disease,Schnitzler syndrome,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,29378,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,GSE292123,GSE292123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,urticarial rash,MONDO:0018304,luna,Schnitzler syndrome,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999931180033033,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850437,,,train,sda-all,samples/GSE292123/GSM8850437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8850438,skin,disease,Schnitzler syndrome,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,23627,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,GSE292123,GSE292123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,urticarial rash,MONDO:0018304,luna,Schnitzler syndrome,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850438,,,train,sda-all,samples/GSE292123/GSM8850438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8850439,skin,disease,Schnitzler syndrome,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,27541,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,GSE292123,GSE292123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,urticarial rash,MONDO:0018304,luna,Schnitzler syndrome,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000060286619815,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850439,,,train,sda-all,samples/GSE292123/GSM8850439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850440,skin,disease,Schnitzler syndrome,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,12554,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,GSE292123,GSE292123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,urticarial rash,MONDO:0018304,luna,Schnitzler syndrome,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000137249519626,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850440,,,train,sda-all,samples/GSE292123/GSM8850440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850441,skin,disease,Schnitzler syndrome,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,27359,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,GSE292123,GSE292123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,urticarial rash,MONDO:0018304,luna,Schnitzler syndrome,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850441,,,train,sda-all,samples/GSE292123/GSM8850441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8850442,skin,disease,Schnitzler syndrome,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16706,Spatial transcriptomics analysis of urticarial rash skin from patients with Schnitzler syndrome,GSE292123,GSE292123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,urticarial rash,MONDO:0018304,luna,Schnitzler syndrome,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999871040957383,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,40393905,,GSM8850442,,,train,sda-all,samples/GSE292123/GSM8850442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8851325,skin,normal,,sebaceous gland,primary tissue,Homo sapiens,human,not stated,female,Stereo-seq,Stereo-seq,False,,28526,High-Resolution Spatial Map of the Human Facial Sebaceous Gland Reveals Marker Genes and Decodes Sebocyte Differentiation,GSE292156,GSE292156,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001821,Skin,,luna,,Healthy,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,35127,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,40449655,,GSM8851325,,,train,sda-all,samples/GSE292156/GSM8851325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM8851326,skin,normal,,sebaceous gland,primary tissue,Homo sapiens,human,not stated,female,Stereo-seq,Stereo-seq,False,,25242,High-Resolution Spatial Map of the Human Facial Sebaceous Gland Reveals Marker Genes and Decodes Sebocyte Differentiation,GSE292156,GSE292156,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001821,Skin,,luna,,Healthy,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,33379,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,40449655,,GSM8851326,,,train,sda-all,samples/GSE292156/GSM8851326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8851327,skin,normal,,sebaceous gland,primary tissue,Homo sapiens,human,not stated,female,Stereo-seq,Stereo-seq,False,,24557,High-Resolution Spatial Map of the Human Facial Sebaceous Gland Reveals Marker Genes and Decodes Sebocyte Differentiation,GSE292156,GSE292156,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001821,Skin,,luna,,Healthy,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,33785,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,40449655,,GSM8851327,,,train,sda-all,samples/GSE292156/GSM8851327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8855042,liver,disease,metabolic dysfunction-associated steatotic liver disease,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,54921,Spatial single-cell transcriptomics of MASLD-affected liver biopsy samples.,GSE292268,GSE292268,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver biopsy,MONDO:0013209,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMX,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40262132,,GSM8855042,,,train,sda-all,samples/GSE292268/GSM8855042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855043,liver,disease,metabolic dysfunction-associated steatotic liver disease,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,52335,Spatial single-cell transcriptomics of MASLD-affected liver biopsy samples.,GSE292268,GSE292268,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver biopsy,MONDO:0013209,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMX,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40262132,,GSM8855043,,,train,sda-all,samples/GSE292268/GSM8855043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8855703,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8458,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,16.37637469714251,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855703,,,train,sda-all,samples/GSE292299/GSM8855703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855704,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),6907,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,9.550687471935568,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855704,,,train,sda-all,samples/GSE292299/GSM8855704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855705,lymph node,disease,non-small cell lung carcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9158,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,9.224979233369051,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855705,,,train,sda-all,samples/GSE292299/GSM8855705,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855706,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9516,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,10.9366280382293,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855706,,,train,sda-all,samples/GSE292299/GSM8855706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855707,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5388,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,14.34721964370728,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855707,,,train,sda-all,samples/GSE292299/GSM8855707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855708,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10078,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,14.433796117110576,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855708,,,train,sda-all,samples/GSE292299/GSM8855708,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855709,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5705,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,7.828303642780515,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855709,,,train,sda-all,samples/GSE292299/GSM8855709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8855710,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5218,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,5.984771810625042,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855710,,,train,sda-all,samples/GSE292299/GSM8855710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855711,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12242,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,13.690222177208893,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855711,,,train,sda-all,samples/GSE292299/GSM8855711,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855712,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8862,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,19.22920996493311,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855712,,,train,sda-all,samples/GSE292299/GSM8855712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855713,brain,disease,non-small cell lung carcinoma,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),13202,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,12.527683653278112,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855713,,,train,sda-all,samples/GSE292299/GSM8855713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8855714,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2131,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,7.657900547001402,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855714,,,train,sda-all,samples/GSE292299/GSM8855714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855715,head and neck,disease,non-small cell lung carcinoma,cheek,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5247,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001567,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,9.367875367707832,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855715,,,train,sda-all,samples/GSE292299/GSM8855715,sda-tissue-disease-2.3,"{""organ"": 0.28, ""sample_kind"": 0.43, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",organ;sample_kind,low_confidence_annotation
GSM8855716,airway,disease,non-small cell lung carcinoma,pleura,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1862,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0000977,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,8.281371867301788,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855716,,,train,sda-all,samples/GSE292299/GSM8855716,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.65, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM8855717,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),13002,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,14.591720756366335,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855717,,,train,sda-all,samples/GSE292299/GSM8855717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855718,airway,disease,non-small cell lung carcinoma,pleura,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5351,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0000977,NSCLC tumor,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,11.166434273112843,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855718,,,train,sda-all,samples/GSE292299/GSM8855718,sda-tissue-disease-2.3,"{""organ"": 0.44, ""sample_kind"": 0.65, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8855719,lymph node,disease,diffuse large B-cell lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12413,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,DLBCL tumor,MONDO:0018905,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,8.264852912214588,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855719,,,train,sda-all,samples/GSE292299/GSM8855719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8855720,lymph node,disease,diffuse large B-cell lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),13713,Conserved principles of spatial biology define tumor heterogeneity and immunotherapy sensitivity,GSE292299,GSE292299,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,DLBCL tumor,MONDO:0018905,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,10.230520490268521,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8855720,,,train,sda-all,samples/GSE292299/GSM8855720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8858311,skin,normal,,skin of face,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERSCOPE,False,,69492,High-Resolution Spatial Map of the Human Facial Sebaceous Gland Reveals Marker Genes and Decodes Sebocyte Differentiation [MERFISH],GSE292394,GSE292394,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:1000021,,,luna,,Healthy,age rule: age in years,adult,49 y,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,40449655,,GSM8858311,,,test,sda-all,samples/GSE292394/GSM8858311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8863903,lung,disease,squamous cell lung carcinoma;lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,4282,TMPRSS11B promotes an acidified microenvironment and immune suppression in squamous lung cancer,GSE292706,GSE292706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005097;MONDO:0005061,luna,lung squamous cell carcinoma,"SNL LUSC GEMM, 11 months post Ad-Cre",luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,1.219421521699385,platform_constant,1.219421521699385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41214366,,GSM8863903,,,train,hesrt,samples/GSE292706/GSM8863903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8865417,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,False,,131548,Cosmx Spatial Analysis of whole brain slices and ventral pallidum,GSE292791,GSE292791,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,Whole Brain,,luna,,,age rule: age with unit,adult,8 week old,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Cosmx,,,cell,1000,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40240618,,GSM8865417,,,train,sda-all,samples/GSE292791/GSM8865417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM8870977,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3433,Spatial  transcriptomic comparison between IPF and donor lung distal explant tissue,GSE292956,GSE292956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,Donor,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,10.220516044355595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8870977,,,train,sda-all,samples/GSE292956/GSM8870977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8870978,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4992,Spatial  transcriptomic comparison between IPF and donor lung distal explant tissue,GSE292956,GSE292956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,Donor,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.9639538071879965,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),cluttered background,,,GSM8870978,,,train,sda-all,samples/GSE292956/GSM8870978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8870979,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4257,Spatial  transcriptomic comparison between IPF and donor lung distal explant tissue,GSE292956,GSE292956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,Donor,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,10.131067602646484,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),background may not be typical H&E,,,GSM8870979,,,train,sda-all,samples/GSE292956/GSM8870979,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8870980,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4595,Spatial  transcriptomic comparison between IPF and donor lung distal explant tissue,GSE292956,GSE292956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0800504,luna,,IPF,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.95719831774099,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8870980,,,train,sda-all,samples/GSE292956/GSM8870980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8870981,lung,disease,idiopathic pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4704,Spatial  transcriptomic comparison between IPF and donor lung distal explant tissue,GSE292956,GSE292956,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0800504,luna,,IPF,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.043219719031177,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8870981,,,train,sda-all,samples/GSE292956/GSM8870981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8874476,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,adult,female,Stereo-seq,Stereo-seq,False,,47563,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Stereo-seq],GSE293043,GSE293043,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002369,adult adrenal gland,,luna,,,age rule: age in years,adult,20 years,extracted field,Female,,,fresh frozen,fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,31269,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8874476,,,train,sda-all,samples/GSE293043/GSM8874476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8874477,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,juvenile,male,Stereo-seq,Stereo-seq,False,,47776,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Stereo-seq],GSE293043,GSE293043,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002369,adult adrenal gland,,luna,,,age rule: age in years,juvenile,13 years,extracted field,Male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,29850,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8874477,,,train,sda-all,samples/GSE293043/GSM8874477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8874478,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,adult,male,Stereo-seq,Stereo-seq,False,,77308,Human and mouse adrenal glands are characterized by species-specific steroidogenic states and tissue turnover [Stereo-seq],GSE293043,GSE293043,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002369,adult adrenal gland,,luna,,,age rule: age in years,adult,40 years,extracted field,Male,,,fresh frozen,fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,29813,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8874478,,,train,sda-all,samples/GSE293043/GSM8874478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8875080,other,disease,osteosarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1243,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Soft-tissue local osteosarcoma relapse,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.24032496939305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875080,,,train,sda-all,samples/GSE293065/GSM8875080,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.7000000000000001, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8875081,other,disease,osteosarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,570,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Soft-tissue local periprosthetic osteosarcoma relapse,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17922,counts,um,1.0,verified,4.092969677249734,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875081,,,train,sda-all,samples/GSE293065/GSM8875081,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8875082,other,disease,osteosarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,662,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Soft-tissue local osteosarcoma relapse,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.026417398064894,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875082,,,train,sda-all,samples/GSE293065/GSM8875082,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8875083,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3799,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.001808187222318,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875083,,,train,sda-all,samples/GSE293065/GSM8875083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875084,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2901,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.096870489876657,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875084,,,train,sda-all,samples/GSE293065/GSM8875084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875085,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2406,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.096613840205168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875085,,,train,sda-all,samples/GSE293065/GSM8875085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875086,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4352,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17922,counts,um,1.0,verified,4.059978735714442,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875086,,,train,sda-all,samples/GSE293065/GSM8875086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8875087,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4128,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17922,counts,um,1.0,verified,4.260288457988474,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875087,,,train,sda-all,samples/GSE293065/GSM8875087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875088,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,677,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.242597904199281,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875088,,,train,sda-all,samples/GSE293065/GSM8875088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875089,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2945,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.988239719907215,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875089,,,train,sda-all,samples/GSE293065/GSM8875089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8875090,lymph node,disease,osteosarcoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1218,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Lymph node metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.2409869316753,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875090,,,train,sda-all,samples/GSE293065/GSM8875090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8875091,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2290,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.093751563760936,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875091,,,train,sda-all,samples/GSE293065/GSM8875091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875092,heart,disease,osteosarcoma,heart,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3374,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.241576593552602,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875092,,,train,sda-all,samples/GSE293065/GSM8875092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8875093,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3012,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.093148731677203,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875093,,,train,sda-all,samples/GSE293065/GSM8875093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875094,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3297,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.961723383375854,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875094,,,train,sda-all,samples/GSE293065/GSM8875094,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875095,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3140,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.093447816701079,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875095,,,train,sda-all,samples/GSE293065/GSM8875095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875096,lung,disease,osteosarcoma,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3635,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung metastatic osteosarcoma,MONDO:0009807,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.093592382415134,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875096,,,train,sda-all,samples/GSE293065/GSM8875096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8875097,bone,disease,bone osteosarcoma,bone element,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,829,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Primary bone osteosarcoma,MONDO:0002629,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.119524702494144,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875097,,,train,sda-all,samples/GSE293065/GSM8875097,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8875098,bone,disease,bone osteosarcoma,bone element,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,712,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Primary bone osteosarcoma,MONDO:0002629,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.003529002917406,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875098,,,train,sda-all,samples/GSE293065/GSM8875098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.33, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8875099,bone,disease,bone osteosarcoma,bone element,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1190,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Primary bone osteosarcoma,MONDO:0002629,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.068819184600977,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875099,,,train,sda-all,samples/GSE293065/GSM8875099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8875100,bone,disease,bone osteosarcoma,bone element,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,842,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Primary bone osteosarcoma,MONDO:0002629,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.020298117928821,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875100,,,train,sda-all,samples/GSE293065/GSM8875100,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8875101,bone,disease,bone osteosarcoma,bone element,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1805,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Primary bone osteosarcoma,MONDO:0002629,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.934482783578301,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875101,,,train,sda-all,samples/GSE293065/GSM8875101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM8875102,bone,disease,bone osteosarcoma,bone element,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,461,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Primary bone osteosarcoma,MONDO:0002629,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.9747045810137713,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875102,,,train,sda-all,samples/GSE293065/GSM8875102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8875103,bone,disease,bone osteosarcoma,bone element,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,754,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Primary bone osteosarcoma,MONDO:0002629,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.9480570952327723,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875103,,,train,sda-all,samples/GSE293065/GSM8875103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8875104,bone,disease,bone osteosarcoma,bone element,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2191,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Primary bone osteosarcoma,MONDO:0002629,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.952768127673753,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875104,,,train,sda-all,samples/GSE293065/GSM8875104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8875105,bone,disease,bone osteosarcoma,bone element,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,876,Spatial transcriptomic atlas of aggressive osteosarcomas reveals shared gene surface expression and immune landscape.,GSE293065,GSE293065,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Primary bone osteosarcoma,MONDO:0002629,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.989067994291891,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42399228,,GSM8875105,,,train,sda-all,samples/GSE293065/GSM8875105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8876950,unknown,disease,colorectal carcinoma,,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,61418,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876950,,,train,sda-all,samples/GSE293124/GSM8876950,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8876951,colon,disease,colorectal carcinoma,colon,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,171406,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876951,,,train,sda-all,samples/GSE293124/GSM8876951,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.30000000000000004, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8876952,unknown,disease,colorectal carcinoma,,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,119217,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876952,,,train,sda-all,samples/GSE293124/GSM8876952,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8876953,colon,disease,colorectal carcinoma,colon,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,75613,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876953,,,train,sda-all,samples/GSE293124/GSM8876953,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.0, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8876954,unknown,disease,colorectal carcinoma,,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,54334,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,ABSENT,FAILED,VERIFIED,,,VERIFIED,,,,42167227,,GSM8876954,,,train,sda-all,samples/GSE293124/GSM8876954,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8876955,colon,disease,colorectal carcinoma,colon,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,32162,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,42167227,,GSM8876955,,,train,sda-all,samples/GSE293124/GSM8876955,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8876956,unknown,disease,colorectal carcinoma,,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,60351,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1157,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876956,,,train,sda-all,samples/GSE293124/GSM8876956,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8876957,colon,disease,colorectal carcinoma,colon,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,237675,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1157,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876957,,,train,sda-all,samples/GSE293124/GSM8876957,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.32, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8876958,colon,disease,colorectal carcinoma,colon,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,52722,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1157,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876958,,,train,sda-all,samples/GSE293124/GSM8876958,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.2, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8876959,unknown,disease,colorectal carcinoma,,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,185327,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1157,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876959,,,train,sda-all,samples/GSE293124/GSM8876959,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8876960,unknown,disease,colorectal carcinoma,,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,52500,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1157,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876960,,,train,sda-all,samples/GSE293124/GSM8876960,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8876961,colon,disease,colorectal carcinoma,colon,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,583620,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1157,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876961,,,train,sda-all,samples/GSE293124/GSM8876961,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.26, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8876962,unknown,disease,colorectal carcinoma,,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,76057,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1157,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876962,,,train,sda-all,samples/GSE293124/GSM8876962,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8876963,unknown,disease,colorectal carcinoma,,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,139157,Concurrent genetic and non-genetic resistance mechanisms to KRAS inhibition in CRC,GSE293124,GSE293124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,colorectal cancer,MONDO:0024331,luna,Metastatic,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1157,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42167227,,GSM8876963,,,train,sda-all,samples/GSE293124/GSM8876963,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8877284,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,1717519,A Deep Dive into the Functional and Spatial Heterogeneity of Lung Interstitial Macrophages [Xenium],GSE293144,GSE293144,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,LPS,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42358977,,GSM8877284,,,test,sda-all,samples/GSE293144/GSM8877284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8877285,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1183880,A Deep Dive into the Functional and Spatial Heterogeneity of Lung Interstitial Macrophages [Xenium],GSE293144,GSE293144,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Naïve,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,mLung_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999945645084141,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42358977,,GSM8877285,,,test,sda-all,samples/GSE293144/GSM8877285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8878529,breast,disease,triple-negative breast carcinoma,breast,xenograft,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,189598,A visual–omics foundation model to bridge histopathology image with transcriptomics,GSE293199,GSE293199,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0000310,breast,MONDO:0005494,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,Xenium Human Breast Gene Expression,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999890452310239,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40442373,,GSM8878529,,,train,sda-all,samples/GSE293199/GSM8878529,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8881930,blood vessel,normal,,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,601,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,,luna,,Non-Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.8408922084519475,platform_constant,4.8408922084519475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881930,,,train,hesrt,samples/GSE293427/GSM8881930,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881931,blood vessel,normal,,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,711,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,,luna,,Non-Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.83955890369402,platform_constant,4.83955890369402,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881931,,,train,hesrt,samples/GSE293427/GSM8881931,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881932,blood vessel,normal,,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,669,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,,luna,,Non-Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.842558993454119,platform_constant,4.842558993454119,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881932,,,train,hesrt,samples/GSE293427/GSM8881932,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8881933,blood vessel,normal,,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,701,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,,luna,,Non-Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.6045885058682945,platform_constant,4.6045885058682945,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881933,,,train,hesrt,samples/GSE293427/GSM8881933,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881934,blood vessel,normal,,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,645,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,,luna,,Non-Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.6070795153609065,platform_constant,4.6070795153609065,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881934,,,train,hesrt,samples/GSE293427/GSM8881934,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8881935,blood vessel,disease,diabetes mellitus,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,734,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,MONDO:0005015,luna,,Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.627990437672536,platform_constant,4.627990437672536,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881935,,,train,hesrt,samples/GSE293427/GSM8881935,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881936,blood vessel,disease,diabetes mellitus,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,851,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,MONDO:0005015,luna,,Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.511288946579142,platform_constant,5.511288946579142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881936,,,train,hesrt,samples/GSE293427/GSM8881936,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881937,blood vessel,disease,diabetes mellitus,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,959,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,MONDO:0005015,luna,,Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.510845855368486,platform_constant,5.510845855368486,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881937,,,train,hesrt,samples/GSE293427/GSM8881937,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881938,blood vessel,disease,diabetes mellitus,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1093,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,MONDO:0005015,luna,,Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.511288946579142,platform_constant,5.511288946579142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881938,,,train,hesrt,samples/GSE293427/GSM8881938,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881939,blood vessel,disease,diabetes mellitus,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1471,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,MONDO:0005015,luna,,Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.840225464253841,platform_constant,4.840225464253841,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881939,,,train,hesrt,samples/GSE293427/GSM8881939,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8881940,blood vessel,disease,diabetes mellitus,mesenteric artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1437,Mapping Endothelial-Macrophage Interactions in Diabetic Vasculature: Role of TREM2 in Vascular Inflammation and Ischemic Response [Spatial Transcriptomics],GSE293427,GSE293427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005616,Blood Vessel,MONDO:0005015,luna,,Diabetic,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.839225516615058,platform_constant,4.839225516615058,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42018669,,GSM8881940,,,train,hesrt,samples/GSE293427/GSM8881940,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8885853,eye,normal,,retina,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,59904,"Retinoic acid drives cell fate specification, maturation and retinal regionality in human retinal organoids [Visium]",GSE293582,GSE293582,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000966,retinal organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,near_duplicate_observations;duplicated_observations,VERIFIED,,,,42031716,,GSM8885853,,,train,sda-all,samples/GSE293582/GSM8885853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM8885854,eye,normal,,retina,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,34944,"Retinoic acid drives cell fate specification, maturation and retinal regionality in human retinal organoids [Visium]",GSE293582,GSE293582,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000966,retinal organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,near_duplicate_observations;duplicated_observations,VERIFIED,,,,42031716,,GSM8885854,,,train,sda-all,samples/GSE293582/GSM8885854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8885855,eye,normal,,retina,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,74880,"Retinoic acid drives cell fate specification, maturation and retinal regionality in human retinal organoids [Visium]",GSE293582,GSE293582,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000966,retinal organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,near_duplicate_observations;duplicated_observations,VERIFIED,,,,42031716,,GSM8885855,,,train,sda-all,samples/GSE293582/GSM8885855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM8885856,eye,normal,,retina,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,29952,"Retinoic acid drives cell fate specification, maturation and retinal regionality in human retinal organoids [Visium]",GSE293582,GSE293582,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000966,retinal organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,near_duplicate_observations;duplicated_observations,VERIFIED,,,,42031716,,GSM8885856,,,train,sda-all,samples/GSE293582/GSM8885856,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8889642,spleen,normal,,spleen,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,False,,911457,Spatial and Functional Specialization of Human Splenic Innate Lymphoid Cells [Xenium],GSE293759,GSE293759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002106,Formalin-fixed spleen,,luna,,,age rule: bare number read as years,adult,34,extracted field,female,,,,,release v3,imaging-based,Xenium,,,cell,422,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8889642,,,train,sda-all,samples/GSE293759/GSM8889642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8889643,spleen,normal,,spleen,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,False,,964648,Spatial and Functional Specialization of Human Splenic Innate Lymphoid Cells [Xenium],GSE293759,GSE293759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002106,Formalin-fixed spleen,,luna,,,age rule: bare number read as years,adult,48,extracted field,male,,,,,release v3,imaging-based,Xenium,,,cell,422,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8889643,,,train,sda-all,samples/GSE293759/GSM8889643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8889644,spleen,normal,,spleen,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,False,,2862735,Spatial and Functional Specialization of Human Splenic Innate Lymphoid Cells [Xenium],GSE293759,GSE293759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002106,Formalin-fixed spleen,,luna,,,age rule: bare number read as years,adult,29,extracted field,female,,,,,release v3,imaging-based,Xenium,,,cell,422,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM8889644,,,train,sda-all,samples/GSE293759/GSM8889644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8890017,adrenal gland,normal,,adrenal gland,organoid,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,111746,An organoid model of the human adrenal cortex identifies drivers of steroidogenesis and zonation [spatial],GSE293783,GSE293783,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adrenal gland,,luna,,,rule: culture or organoid (culture time is not a life stage),fetal,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8890017,,,train,hesrt,samples/GSE293783/GSM8890017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",sample_kind;life_stage,low_confidence_annotation
GSM8890018,adrenal gland,normal,,adrenal gland,primary tissue,Homo sapiens,human,adult,unknown,Visium HD,Visium HD,True,H&E,127893,An organoid model of the human adrenal cortex identifies drivers of steroidogenesis and zonation [spatial],GSE293783,GSE293783,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,Adrenal gland,,luna,,,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8890018,,,train,hesrt,samples/GSE293783/GSM8890018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.37, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.88}",sample_kind,low_confidence_annotation
GSM8890214,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,77695,Cancer agnostic potential of CAR T cells targeting the urokinase plasminogen activator receptor,GSE293800,GSE293800,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreas,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999920402445237,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41916312,,GSM8890214,,,train,sda-all,samples/GSE293800/GSM8890214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8893111,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,13235,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,GSE293896,GSE293896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Postmortem temporal cortex,,luna,,Control brain with APOE3/3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,14.41080866726264,platform_constant,14.41080866726264,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893111,,,train,hesrt,samples/GSE293896/GSM8893111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8893112,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,12985,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,GSE293896,GSE293896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Postmortem temporal cortex,,luna,,Control brain with APOE3/3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,15.402003571160476,platform_constant,15.402003571160476,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893112,,,train,hesrt,samples/GSE293896/GSM8893112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8893113,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,13079,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,GSE293896,GSE293896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Postmortem temporal cortex,,luna,,Control brain with APOE3/4,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,13.146702987539177,platform_constant,13.146702987539177,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893113,,,train,hesrt,samples/GSE293896/GSM8893113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893114,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,11931,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,GSE293896,GSE293896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Postmortem temporal cortex,,luna,,Control brain with APOE3/4,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,13.905166136701354,platform_constant,13.905166136701354,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893114,,,train,hesrt,samples/GSE293896/GSM8893114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8893115,brain,disease,Lewy body dementia,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,12011,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,GSE293896,GSE293896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Postmortem temporal cortex,MONDO:0007488,luna,Lewy Body Dementia,LBD brain with APOE3/3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,14.442856741427088,platform_constant,14.442856741427088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893115,,,train,hesrt,samples/GSE293896/GSM8893115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893116,brain,disease,Lewy body dementia,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,11447,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,GSE293896,GSE293896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Postmortem temporal cortex,MONDO:0007488,luna,Lewy Body Dementia,LBD brain with APOE3/3,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,14.151968621545176,platform_constant,14.151968621545176,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893116,,,train,hesrt,samples/GSE293896/GSM8893116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893117,brain,disease,Lewy body dementia,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,7611,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,GSE293896,GSE293896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Postmortem temporal cortex,MONDO:0007488,luna,Lewy Body Dementia,LBD brain with APOE3/4,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,14.390220980924468,platform_constant,14.390220980924468,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893117,,,train,hesrt,samples/GSE293896/GSM8893117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893118,brain,disease,Lewy body dementia,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,10187,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,GSE293896,GSE293896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Postmortem temporal cortex,MONDO:0007488,luna,Lewy Body Dementia,LBD brain with APOE3/4,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,12.381061361854178,platform_constant,12.381061361854178,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893118,,,train,hesrt,samples/GSE293896/GSM8893118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893119,brain,disease,Lewy body dementia,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,11002,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,GSE293896,GSE293896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Postmortem temporal cortex,MONDO:0007488,luna,Lewy Body Dementia,LBD brain with APOE3/3 and SNCA triplication,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.86842070676877,platform_constant,8.86842070676877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893119,,,train,hesrt,samples/GSE293896/GSM8893119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8893120,brain,disease,Lewy body dementia,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,13770,Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia,GSE293896,GSE293896,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,Postmortem temporal cortex,MONDO:0007488,luna,Lewy Body Dementia,LBD brain with APOE3/4 and SNCA triplication,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,13.652344594272655,platform_constant,13.652344594272655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41588135,,GSM8893120,,,train,hesrt,samples/GSE293896/GSM8893120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8895453,other,disease,arthritic joint disease,,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,7774,Conversion of Th17 into exTh17 sustains rheumatoid-like IL-17-independent inflammatory arthritis [Xenium],GSE293970,GSE293970,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,human synoival tissue,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,41202149,,GSM8895453,,,val,sda-all,samples/GSE293970/GSM8895453,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8895454,other,disease,arthritic joint disease,,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,7791,Conversion of Th17 into exTh17 sustains rheumatoid-like IL-17-independent inflammatory arthritis [Xenium],GSE293970,GSE293970,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,human synoival tissue,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41202149,,GSM8895454,,,val,sda-all,samples/GSE293970/GSM8895454,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9196832,other,disease,arthritic joint disease,,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,21477,Conversion of Th17 into exTh17 sustains rheumatoid-like IL-17-independent inflammatory arthritis [Xenium],GSE293970,GSE293970,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,,MONDO:0005578,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000093021332892,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41202149,,GSM9196832,,,val,sda-all,samples/GSE293970/GSM9196832,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8896252,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E-like (heuristic),4749,Hypoxia shapes both therapeutic response and resistance in metastatic clear cell renal cell carcinoma [Spatial Transcriptomics],GSE294006,GSE294006,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Primary Tumor,MONDO:0005005,luna,,,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.509809912214167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42242232,,GSM8896252,,,train,sda-all,samples/GSE294006/GSM8896252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8896253,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E-like (heuristic),4660,Hypoxia shapes both therapeutic response and resistance in metastatic clear cell renal cell carcinoma [Spatial Transcriptomics],GSE294006,GSE294006,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Primary Tumor,MONDO:0005005,luna,,,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,5.147004625833908,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42242232,,GSM8896253,,,train,sda-all,samples/GSE294006/GSM8896253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8896254,kidney,disease,clear cell renal carcinoma,kidney,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E-like (heuristic),4174,Hypoxia shapes both therapeutic response and resistance in metastatic clear cell renal cell carcinoma [Spatial Transcriptomics],GSE294006,GSE294006,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Primary Tumor,MONDO:0005005,luna,,,luna,adult,,extracted field,M,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.903950815218669,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42242232,,GSM8896254,,,train,sda-all,samples/GSE294006/GSM8896254,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM8898654,brain,disease,tauopathy,brain,primary tissue,Danio rerio,zebrafish,not stated,unknown,Stereo-seq,Stereo-seq,False,,3971,P301S Mutant Tau-Driven Zebrafish Platform Enables Systematic Identification of Pharmacological GSK3β Inhibitors with Anti-Neurodegenerative Efficacy,GSE294097,GSE294097,7955,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,luna,UBERON:0000955,Brain,MONDO:0005574,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,25417,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8898654,,,val,sda-all,samples/GSE294097/GSM8898654,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8898655,brain,disease,,brain,primary tissue,Danio rerio,zebrafish,not stated,unknown,Stereo-seq,Stereo-seq,False,,6764,P301S Mutant Tau-Driven Zebrafish Platform Enables Systematic Identification of Pharmacological GSK3β Inhibitors with Anti-Neurodegenerative Efficacy,GSE294097,GSE294097,7955,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,26462,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8898655,,,val,sda-all,samples/GSE294097/GSM8898655,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8898656,brain,disease,tauopathy,brain,primary tissue,Danio rerio,zebrafish,not stated,unknown,Stereo-seq,Stereo-seq,False,,6663,P301S Mutant Tau-Driven Zebrafish Platform Enables Systematic Identification of Pharmacological GSK3β Inhibitors with Anti-Neurodegenerative Efficacy,GSE294097,GSE294097,7955,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,luna,UBERON:0000955,Brain,MONDO:0005574,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,25287,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8898656,,,val,sda-all,samples/GSE294097/GSM8898656,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8898657,brain,normal,,brain,primary tissue,Danio rerio,zebrafish,not stated,unknown,Stereo-seq,Stereo-seq,False,,5609,P301S Mutant Tau-Driven Zebrafish Platform Enables Systematic Identification of Pharmacological GSK3β Inhibitors with Anti-Neurodegenerative Efficacy,GSE294097,GSE294097,7955,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,25973,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8898657,,,val,sda-all,samples/GSE294097/GSM8898657,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8898959,skin,disease,,zone of skin,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1404,Study on the Effects of Retinoids on UVR-Induced Skin Photoaging [Spatial Transcriptomics],GSE294120,GSE294120,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,"UVR skin of SKH-1 mice (upper), and normal skin of SKH-1 mice (lower)",age rule: age with unit,not stated,10–12 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.109423838294563,platform_constant,6.109423838294563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41644086,,GSM8898959,,,val,hesrt,samples/GSE294120/GSM8898959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.51, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8898960,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1771,Study on the Effects of Retinoids on UVR-Induced Skin Photoaging [Spatial Transcriptomics],GSE294120,GSE294120,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,"UVR and treated with 0.1% Retinol skin of SKH-1 mice (upper), UVR and treated with 0.03% 9-cis HPR skin of SKH-1 mice (lower)",age rule: age with unit,not stated,10–12 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.021750002741895,platform_constant,5.021750002741895,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41644086,,GSM8898960,,,val,hesrt,samples/GSE294120/GSM8898960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8900422,other,normal,,forelimb,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,64426,The essential role of connective-tissue cells during axolotl limb regeneration,GSE294212,GSE294212,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002102,15 micrometer cryosection from whole forelimb,,luna,,0 (Mature limb),luna,adult,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999448397595014,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900422,,,train,sda-all,samples/GSE294212/GSM8900422,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM8900423,other,perturbation,,stylopod,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,12823,The essential role of connective-tissue cells during axolotl limb regeneration,GSE294212,GSE294212,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002472,15 micrometer cryosection from whole stylopod,,luna,,3 dpa,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000012903891814,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900423,,,train,sda-all,samples/GSE294212/GSM8900423,sda-tissue-disease-2.4,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.87}",organ,low_confidence_annotation
GSM8900424,other,perturbation,,stylopod,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,5869,The essential role of connective-tissue cells during axolotl limb regeneration,GSE294212,GSE294212,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002472,15 micrometer cryosection from whole stylopod,,luna,,5 dpa,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000051303098707,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900424,,,train,sda-all,samples/GSE294212/GSM8900424,sda-tissue-disease-2.4,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.87}",organ,low_confidence_annotation
GSM8900425,other,perturbation,,stylopod,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,17002,The essential role of connective-tissue cells during axolotl limb regeneration,GSE294212,GSE294212,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002472,15 micrometer cryosection from whole stylopod,,luna,,7 dpa,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500003759681179,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900425,,,train,sda-all,samples/GSE294212/GSM8900425,sda-tissue-disease-2.4,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM8900426,other,perturbation,,stylopod,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,5400,The essential role of connective-tissue cells during axolotl limb regeneration,GSE294212,GSE294212,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002472,15 micrometer cryosection from whole stylopod,,luna,,10 dpa,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999589827727645,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900426,,,train,sda-all,samples/GSE294212/GSM8900426,sda-tissue-disease-2.4,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM8900427,other,perturbation,,stylopod,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,13166,The essential role of connective-tissue cells during axolotl limb regeneration,GSE294212,GSE294212,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002472,15 micrometer cryosection from whole stylopod,,luna,,14 dpa,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999226086059223,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8900427,,,train,sda-all,samples/GSE294212/GSM8900427,sda-tissue-disease-2.4,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",organ,low_confidence_annotation
GSM8900554,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1992,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,GSE294222,GSE294222,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Naïve,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,57010,counts,pixel,4.225625123768563,platform_constant,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900554,,,train,hesrt,samples/GSE294222/GSM8900554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8900555,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2614,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,GSE294222,GSE294222,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Naïve,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,57010,counts,pixel,4.2385592182814165,platform_constant,4.2385592182814165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900555,,,train,hesrt,samples/GSE294222/GSM8900555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900556,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2013,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,GSE294222,GSE294222,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Vaccinated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,57010,counts,pixel,4.225625123768563,platform_constant,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900556,,,train,hesrt,samples/GSE294222/GSM8900556,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900557,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2676,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,GSE294222,GSE294222,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Vaccinated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,57010,counts,pixel,4.225625123768563,platform_constant,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900557,,,train,hesrt,samples/GSE294222/GSM8900557,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8900558,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1629,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,GSE294222,GSE294222,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Naïve,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,57010,counts,pixel,4.225625123768563,platform_constant,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900558,,,train,hesrt,samples/GSE294222/GSM8900558,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900559,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2054,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,GSE294222,GSE294222,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Naïve,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,57010,counts,pixel,4.2385592182814165,platform_constant,4.2385592182814165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900559,,,train,hesrt,samples/GSE294222/GSM8900559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900560,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1722,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,GSE294222,GSE294222,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Vaccinated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,57010,counts,pixel,4.225625123768563,platform_constant,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900560,,,train,hesrt,samples/GSE294222/GSM8900560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900561,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2881,Spatial Visualization Provides Insight into Immune Modulation by an L-DBF Vaccine Formulation Against Shigella,GSE294222,GSE294222,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Vaccinated,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,57010,counts,pixel,4.225625123768563,platform_constant,4.225625123768563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40336950,,GSM8900561,,,train,hesrt,samples/GSE294222/GSM8900561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8900775,blood vessel,disease,diabetes mellitus,aorta,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,17160,Single-Cell Multimodal Profiling Highlights Persistent Aortic Smooth Muscle Cell Changes in Diabetic Mice Despite Glycemic Control,GSE294237,GSE294237,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000947,Aorta tissue,MONDO:0005015,luna,,either saline or DAPA,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999390689739215,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41641545,,GSM8900775,,,test,sda-all,samples/GSE294237/GSM8900775,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9262941,other,disease,,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1876,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,GSE294277,GSE294277,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,,luna,FAI,FAI,luna,not stated,,not stated,,GSE294277:FAI patient #1,FAI patient #1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262941,,,test,hesrt,samples/GSE294277/GSM9262941,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 0.54, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;sample_kind,low_confidence_annotation
GSM9262942,other,disease,,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1766,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,GSE294277,GSE294277,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,,luna,FAI,FAI,luna,not stated,,not stated,,GSE294277:FAI patient #2,FAI patient #2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262942,,,test,hesrt,samples/GSE294277/GSM9262942,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.66, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262943,other,disease,,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2721,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,GSE294277,GSE294277,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,,luna,FAI,FAI,luna,not stated,,not stated,,GSE294277:FAI patient #5,FAI patient #5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262943,,,test,hesrt,samples/GSE294277/GSM9262943,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.78, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262944,other,disease,,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2102,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,GSE294277,GSE294277,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,,luna,FAI,FAI,luna,not stated,,not stated,,GSE294277:FAI patient #6,FAI patient #6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262944,,,test,hesrt,samples/GSE294277/GSM9262944,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9262945,other,disease,osteoarthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1510,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,GSE294277,GSE294277,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0005178,luna,hip OA,hip OA,luna,not stated,,not stated,,GSE294277:OA patient #1,OA patient #1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.563782286098332,platform_constant,4.563782286098332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262945,,,test,hesrt,samples/GSE294277/GSM9262945,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262946,other,disease,osteoarthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3143,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,GSE294277,GSE294277,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0005178,luna,hip OA,hip OA,luna,not stated,,not stated,,GSE294277:OA patient #2,OA patient #2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262946,,,test,hesrt,samples/GSE294277/GSM9262946,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.85, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9262947,other,disease,osteoarthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1478,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,GSE294277,GSE294277,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0005178,luna,hip OA,hip OA,luna,not stated,,not stated,,GSE294277:OA patient #3,OA patient #3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262947,,,test,hesrt,samples/GSE294277/GSM9262947,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.89, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262948,other,disease,osteoarthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1838,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,GSE294277,GSE294277,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0005178,luna,hip OA,hip OA,luna,not stated,,not stated,,GSE294277:OA patient #4,OA patient #4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262948,,,test,hesrt,samples/GSE294277/GSM9262948,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262949,other,disease,osteoarthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2858,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,GSE294277,GSE294277,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0005178,luna,hip OA,hip OA,luna,not stated,,not stated,,GSE294277:OA patient #5,OA patient #5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9968038348871575,platform_constant,3.9968038348871575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262949,,,test,hesrt,samples/GSE294277/GSM9262949,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9262950,other,disease,osteoarthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3953,Integrative single cell RNA-sequencing and spatial transcriptomics uncovers distinct macrophage-fibroblast cross-talk in human hip synovium between patients with femoroacetabular impingement and osteoarthritis,GSE294277,GSE294277,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0005178,luna,hip OA,hip OA,luna,not stated,,not stated,,GSE294277:OA patient #6,OA patient #6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41524472,,GSM9262950,,,test,hesrt,samples/GSE294277/GSM9262950,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8903657,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3576,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.573433093701535,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903657,,,train,sda-all,samples/GSE294385/GSM8903657,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903658,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3244,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.1978525082560445,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903658,,,train,sda-all,samples/GSE294385/GSM8903658,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903659,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3204,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.9001319356993984,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903659,,,train,sda-all,samples/GSE294385/GSM8903659,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903660,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8621,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.836118386919609,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903660,,,train,sda-all,samples/GSE294385/GSM8903660,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903661,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10286,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.827686167952177,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903661,,,train,sda-all,samples/GSE294385/GSM8903661,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903662,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8219,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.146381265065446,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903662,,,train,sda-all,samples/GSE294385/GSM8903662,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903663,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12266,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.0121420651635455,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903663,,,train,sda-all,samples/GSE294385/GSM8903663,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903664,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),11406,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.566735750760095,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903664,,,train,sda-all,samples/GSE294385/GSM8903664,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903665,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),6746,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.129020729416923,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903665,,,train,sda-all,samples/GSE294385/GSM8903665,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903666,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8774,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.7260613435158145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks slightly off; check whether it is H&E,42425074,,GSM8903666,,,train,sda-all,samples/GSE294385/GSM8903666,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903667,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3398,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.746976137153565,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903667,,,train,sda-all,samples/GSE294385/GSM8903667,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903668,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7746,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.289740530581422,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903668,,,train,sda-all,samples/GSE294385/GSM8903668,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903669,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10148,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.820624938205231,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903669,,,train,sda-all,samples/GSE294385/GSM8903669,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903670,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9530,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,8.66421621194855,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903670,,,train,sda-all,samples/GSE294385/GSM8903670,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903671,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7583,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.778584452810203,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903671,,,train,sda-all,samples/GSE294385/GSM8903671,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903672,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),13339,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.631562515009119,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903672,,,train,sda-all,samples/GSE294385/GSM8903672,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903673,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),11308,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.728013232905372,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903673,,,train,sda-all,samples/GSE294385/GSM8903673,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903674,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),13166,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.8395679702410135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903674,,,train,sda-all,samples/GSE294385/GSM8903674,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903675,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8105,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.206121482486316,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903675,,,train,sda-all,samples/GSE294385/GSM8903675,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903676,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9380,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.660655844236255,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903676,,,train,sda-all,samples/GSE294385/GSM8903676,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903677,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12749,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.886075711320694,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903677,,,train,sda-all,samples/GSE294385/GSM8903677,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903678,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10720,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.181607687204638,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903678,,,train,sda-all,samples/GSE294385/GSM8903678,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903679,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8459,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.483766818749287,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903679,,,train,sda-all,samples/GSE294385/GSM8903679,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903680,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),13790,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.903757018975338,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903680,,,train,sda-all,samples/GSE294385/GSM8903680,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903681,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),11911,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.294745267766111,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903681,,,train,sda-all,samples/GSE294385/GSM8903681,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903682,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12528,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.354309247181917,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903682,,,train,sda-all,samples/GSE294385/GSM8903682,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903683,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),11599,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.149834790894239,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903683,,,train,sda-all,samples/GSE294385/GSM8903683,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903684,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10876,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.2849113187362935,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903684,,,train,sda-all,samples/GSE294385/GSM8903684,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903685,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),6240,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.044379100047982,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903685,,,train,sda-all,samples/GSE294385/GSM8903685,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903686,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4330,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.555858683174352,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903686,,,train,sda-all,samples/GSE294385/GSM8903686,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903687,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7238,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.13774628043069,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903687,,,train,sda-all,samples/GSE294385/GSM8903687,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903688,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10801,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.331392848639144,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903688,,,train,sda-all,samples/GSE294385/GSM8903688,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903689,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7392,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.166340602495027,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903689,,,train,sda-all,samples/GSE294385/GSM8903689,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903690,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12833,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.218115440503206,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903690,,,train,sda-all,samples/GSE294385/GSM8903690,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903691,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),13565,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.669268793912246,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903691,,,train,sda-all,samples/GSE294385/GSM8903691,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903692,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12896,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.988937498127474,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903692,,,train,sda-all,samples/GSE294385/GSM8903692,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903693,unknown,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),13076,Spatial Multi-Omics Landscape of Colorectal Cancer Macro- and Micrometastases,GSE294385,GSE294385,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Colorectal cancer metastasis,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.488155850595187,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42425074,,GSM8903693,,,train,sda-all,samples/GSE294385/GSM8903693,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8903809,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),906,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.017180199611666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903809,,,val,sda-all,samples/GSE294392/GSM8903809,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM8903810,plant,normal,,,primary tissue,Hordeum vulgare,barley,embryonic,unknown,Visium,Visium,True,blue bright-field stain (heuristic),787,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.4919079102227,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903810,,,val,sda-all,samples/GSE294392/GSM8903810,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.22}",life_stage,low_confidence_annotation
GSM8903811,plant,normal,,,primary tissue,Hordeum vulgare,barley,embryonic,unknown,Visium,Visium,True,blue bright-field stain (heuristic),743,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.611185211766063,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903811,,,val,sda-all,samples/GSE294392/GSM8903811,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.24}",life_stage,low_confidence_annotation
GSM8903812,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),884,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.642198156631606,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903812,,,val,sda-all,samples/GSE294392/GSM8903812,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.23}",life_stage,low_confidence_annotation
GSM8903813,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1244,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.649162398599134,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903813,,,val,sda-all,samples/GSE294392/GSM8903813,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.15}",life_stage,low_confidence_annotation
GSM8903814,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1829,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.490468457837124,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903814,,,val,sda-all,samples/GSE294392/GSM8903814,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.36}",life_stage,low_confidence_annotation
GSM8903816,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1443,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.646359715794956,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903816,,,val,sda-all,samples/GSE294392/GSM8903816,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.23}",life_stage,low_confidence_annotation
GSM8903817,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2025,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.0333426748598615,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903817,,,val,sda-all,samples/GSE294392/GSM8903817,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.24}",life_stage,low_confidence_annotation
GSM8903818,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2022,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.51680683424508,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903818,,,val,sda-all,samples/GSE294392/GSM8903818,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.22}",life_stage,low_confidence_annotation
GSM8903819,plant,normal,,,primary tissue,Hordeum vulgare,barley,embryonic,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2049,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.523871065508794,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903819,,,val,sda-all,samples/GSE294392/GSM8903819,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.25}",life_stage,low_confidence_annotation
GSM8903820,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2074,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.518107105712145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903820,,,val,sda-all,samples/GSE294392/GSM8903820,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.19}",life_stage,low_confidence_annotation
GSM8903821,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2155,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.652865922380966,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903821,,,val,sda-all,samples/GSE294392/GSM8903821,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": NaN, ""life_stage"": 0.18}",life_stage,low_confidence_annotation
GSM8903822,plant,normal,,,primary tissue,Hordeum vulgare,barley,embryonic,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1794,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.483905216206264,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903822,,,val,sda-all,samples/GSE294392/GSM8903822,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8903823,plant,normal,,,primary tissue,Hordeum vulgare,barley,embryonic,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2194,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.6244451291655855,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903823,,,val,sda-all,samples/GSE294392/GSM8903823,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.16}",life_stage,low_confidence_annotation
GSM8903824,plant,normal,,,primary tissue,Hordeum vulgare,barley,embryonic,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2174,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,caryopsis,,luna,,La Trobe,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.652045023563039,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903824,,,val,sda-all,samples/GSE294392/GSM8903824,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.23}",life_stage,low_confidence_annotation
GSM8903825,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1012,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.646846400722763,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903825,,,val,sda-all,samples/GSE294392/GSM8903825,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM8903826,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),960,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.483017920270224,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903826,,,val,sda-all,samples/GSE294392/GSM8903826,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": NaN, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8903827,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1043,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.61044179666421,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903827,,,val,sda-all,samples/GSE294392/GSM8903827,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8903828,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1091,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.651653979097096,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903828,,,val,sda-all,samples/GSE294392/GSM8903828,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM8903829,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1374,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.647734718350966,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903829,,,val,sda-all,samples/GSE294392/GSM8903829,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": NaN, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM8903830,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1197,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.487944106532824,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903830,,,val,sda-all,samples/GSE294392/GSM8903830,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": NaN, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM8903831,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1161,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.615414257718301,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903831,,,val,sda-all,samples/GSE294392/GSM8903831,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": NaN, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM8903832,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1161,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.643690169457632,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903832,,,val,sda-all,samples/GSE294392/GSM8903832,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM8903833,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1108,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.650051162167748,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903833,,,val,sda-all,samples/GSE294392/GSM8903833,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": NaN, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM8903834,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1066,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.4933443460517495,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903834,,,val,sda-all,samples/GSE294392/GSM8903834,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": NaN, ""life_stage"": 0.63}",,
GSM8903835,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1092,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.611585795672573,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903835,,,val,sda-all,samples/GSE294392/GSM8903835,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM8903836,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1058,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.646338478914383,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903836,,,val,sda-all,samples/GSE294392/GSM8903836,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8903837,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1099,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.649291198550399,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903837,,,val,sda-all,samples/GSE294392/GSM8903837,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.85, ""uberon"": NaN, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM8903838,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1146,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.484362750461965,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903838,,,val,sda-all,samples/GSE294392/GSM8903838,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8903839,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1173,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.60978398224168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903839,,,val,sda-all,samples/GSE294392/GSM8903839,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": NaN, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM8903840,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1144,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.640111301782538,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903840,,,val,sda-all,samples/GSE294392/GSM8903840,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8903841,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1281,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.002757907010215,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903841,,,val,sda-all,samples/GSE294392/GSM8903841,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": NaN, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM8903842,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1192,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,3.9720979274481767,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903842,,,val,sda-all,samples/GSE294392/GSM8903842,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": NaN, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8903843,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1274,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,4.016424434103623,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903843,,,val,sda-all,samples/GSE294392/GSM8903843,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM8903844,plant,normal,,,primary tissue,Hordeum vulgare,barley,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1209,A four-dimensional spatial transcriptome atlas of barley caryopsis development and germination,GSE294392,GSE294392,4513,Hordeum vulgare,4513,,False,False,GEO organism field,Hordeum vulgare,,luna,,grain,,luna,,La Trobe,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,43050,counts,um,1.0,verified,3.979310466432978,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42015541,,GSM8903844,,,val,sda-all,samples/GSE294392/GSM8903844,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": NaN, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM8905380,heart,perturbation,,valve,engineered tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,8531,Bioengineered 3D human heart valve tissues with enhanced maturational properties for disease modelling and therapeutic applications [spatial transcriptomics],GSE294442,GSE294442,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0003978,valve engineered tissue,,luna,,"+/- IL-6, IL-8, TNFα",rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,sequencing-based,stereoseq,,,bin,18346,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8905380,,,train,sda-all,samples/GSE294442/GSM8905380,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.8300000000000001, ""life_stage"": 0.99}",,
GSM8907602,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10074,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient1,Patient1,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000020664572656,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907602,,,train,sda-all,samples/GSE294466/GSM8907602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8907603,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,9829,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient1,Patient1,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907603,,,train,sda-all,samples/GSE294466/GSM8907603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8907604,blood vessel,normal,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6576,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Control,luna,not stated,,not stated,,GSE294466:Patient1,Patient1,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000020664572656,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907604,,,train,sda-all,samples/GSE294466/GSM8907604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907605,blood vessel,normal,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6342,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Control,luna,not stated,,not stated,,GSE294466:Patient1,Patient1,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907605,,,train,sda-all,samples/GSE294466/GSM8907605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907606,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,20537,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient2,Patient2,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.49999585772672045,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907606,,,train,sda-all,samples/GSE294466/GSM8907606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907607,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,21723,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient2,Patient2,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000133041627247,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907607,,,train,sda-all,samples/GSE294466/GSM8907607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907608,blood vessel,normal,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6665,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Control,luna,not stated,,not stated,,GSE294466:Patient2,Patient2,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.49999352599958563,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907608,,,train,sda-all,samples/GSE294466/GSM8907608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907609,blood vessel,normal,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6776,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Control,luna,not stated,,not stated,,GSE294466:Patient2,Patient2,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000097145225636,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907609,,,train,sda-all,samples/GSE294466/GSM8907609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907610,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,12829,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient3,Patient3,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000124120810923,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907610,,,train,sda-all,samples/GSE294466/GSM8907610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907611,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,11521,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient3,Patient3,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.4999844797616091,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907611,,,train,sda-all,samples/GSE294466/GSM8907611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8907612,blood vessel,normal,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10396,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Control,luna,not stated,,not stated,,GSE294466:Patient3,Patient3,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000185935046689,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907612,,,train,sda-all,samples/GSE294466/GSM8907612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8907613,blood vessel,normal,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,9878,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Control,luna,not stated,,not stated,,GSE294466:Patient3,Patient3,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000020664572656,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907613,,,train,sda-all,samples/GSE294466/GSM8907613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8907614,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,26134,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient4,Patient4,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000068961712457,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907614,,,train,sda-all,samples/GSE294466/GSM8907614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907615,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,25207,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient4,Patient4,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.49999931034482753,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907615,,,train,sda-all,samples/GSE294466/GSM8907615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907616,blood vessel,normal,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19853,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Control,luna,not stated,,not stated,,GSE294466:Patient4,Patient4,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.49999173143707626,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907616,,,train,sda-all,samples/GSE294466/GSM8907616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8907617,blood vessel,normal,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,18784,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Control,luna,not stated,,not stated,,GSE294466:Patient4,Patient4,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.49998553121124434,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907617,,,train,sda-all,samples/GSE294466/GSM8907617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8907618,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,30205,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient5,Patient5,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999915438965724,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907618,,,train,sda-all,samples/GSE294466/GSM8907618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907619,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,30228,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient5,Patient5,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000075165363801,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907619,,,train,sda-all,samples/GSE294466/GSM8907619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907620,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,35183,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient6,Patient6,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000178504321684,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907620,,,train,sda-all,samples/GSE294466/GSM8907620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8907621,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,34998,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient6,Patient6,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999803881090008,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907621,,,train,sda-all,samples/GSE294466/GSM8907621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907622,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,14547,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient7,Patient7,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000122125356982,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907622,,,train,sda-all,samples/GSE294466/GSM8907622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8907623,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,14638,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient7,Patient7,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000169071235347,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907623,,,train,sda-all,samples/GSE294466/GSM8907623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907624,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24028,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient8,Patient8,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49999482309785814,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907624,,,train,sda-all,samples/GSE294466/GSM8907624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907625,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24963,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient8,Patient8,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999933463449254,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907625,,,train,sda-all,samples/GSE294466/GSM8907625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907626,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,49626,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient9,Patient9,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999933463449254,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907626,,,train,sda-all,samples/GSE294466/GSM8907626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907627,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,48629,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient9,Patient9,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999977819837937,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907627,,,train,sda-all,samples/GSE294466/GSM8907627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907628,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16043,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient10,Patient10,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49998873281754674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907628,,,train,sda-all,samples/GSE294466/GSM8907628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8907629,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16496,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient10,Patient10,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000169071235347,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41413386,,GSM8907629,,,train,sda-all,samples/GSE294466/GSM8907629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907630,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16417,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient11,Patient11,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999770768384375,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907630,,,train,sda-all,samples/GSE294466/GSM8907630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8907631,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,15532,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient11,Patient11,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999965615257656,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907631,,,train,sda-all,samples/GSE294466/GSM8907631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907632,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,31728,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient12,Patient12,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_314g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000051754476762,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907632,,,train,sda-all,samples/GSE294466/GSM8907632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8907633,blood vessel,disease,,carotid artery segment,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,32663,Xenium spatial transcriptomics of human carotid artery plaques,GSE294466,GSE294466,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0005396,human carotid artery tissue,,luna,,Plaque,luna,not stated,,not stated,,GSE294466:Patient12,Patient12,FFPE,FFPE,release v3,imaging-based,Xenium,hArtery_345g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.499998620917917,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41413386,,GSM8907633,,,train,sda-all,samples/GSE294466/GSM8907633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8907699,embryo (whole),normal,,embryo,whole embryo/organism,Danio rerio,zebrafish,embryonic,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,22482,Spatially organized progenitors in the zebrafish heart field determine cardiovascular patterning [MERFISH],GSE294469,GSE294469,7955,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,luna,UBERON:0000922,embryo,,luna,,,luna,embryonic,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,180,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41290702,,GSM8907699,,,train,sda-all,samples/GSE294469/GSM8907699,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.63, ""disease_status"": 0.48, ""uberon"": 0.78, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8907700,embryo (whole),normal,,embryo,whole embryo/organism,Danio rerio,zebrafish,embryonic,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,13298,Spatially organized progenitors in the zebrafish heart field determine cardiovascular patterning [MERFISH],GSE294469,GSE294469,7955,Danio rerio,7955,,False,False,GEO organism field,Danio rerio,,luna,UBERON:0000922,embryo,,luna,,,luna,embryonic,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,180,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41290702,,GSM8907700,,,train,sda-all,samples/GSE294469/GSM8907700,sda-tissue-disease-2.4,"{""organ"": 0.97, ""sample_kind"": 0.61, ""disease_status"": 0.39, ""uberon"": 0.65, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8915488,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2567,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,chronic pancreatitis,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915488,,,test,hesrt,samples/GSE294669/GSM8915488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915489,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1645,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915489,,,test,hesrt,samples/GSE294669/GSM8915489,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8200000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915490,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1873,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,pancreatic intraepithelial neoplasia,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915490,,,test,hesrt,samples/GSE294669/GSM8915490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915491,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2822,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,pancreatic ductal adenocarcinoma,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915491,,,test,hesrt,samples/GSE294669/GSM8915491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915492,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2889,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915492,,,test,hesrt,samples/GSE294669/GSM8915492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915493,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2847,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,pancreatic ductal adenocarcinoma,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915493,,,test,hesrt,samples/GSE294669/GSM8915493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915494,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2791,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,chronic pancreatitis,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915494,,,test,hesrt,samples/GSE294669/GSM8915494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915495,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2156,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915495,,,test,hesrt,samples/GSE294669/GSM8915495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915496,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3088,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,pancreatic ductal adenocarcinoma,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915496,,,test,hesrt,samples/GSE294669/GSM8915496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915497,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1142,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,pancreatic ductal adenocarcinoma,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915497,,,test,hesrt,samples/GSE294669/GSM8915497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915498,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2397,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,chronic pancreatitis,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915498,,,test,hesrt,samples/GSE294669/GSM8915498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915499,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2857,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915499,,,test,hesrt,samples/GSE294669/GSM8915499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8915500,pancreas,disease,pancreatic ductal adenocarcinoma;chronic pancreatitis;intraepithelial neoplasia,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3009,Spatial Proteomics and Transcriptomics Reveal Early Immune Cell Organization in Pancreatic Intraepithelial Neoplasia,GSE294669,GSE294669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005184;MONDO:0005003;MONDO:0024474,luna,pancreatic ductal adenocarcinoma,treatment naive,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,6.757894731435813,platform_constant,6.757894731435813,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40569674,,GSM8915500,,,test,hesrt,samples/GSE294669/GSM8915500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8919109,head and neck,normal,,head,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,19223,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,GSE294759,GSE294759,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000033,head tissue,,luna,,Wild-type,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,33379,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919109,,,train,sda-all,samples/GSE294759/GSM8919109,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8919110,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Stereo-seq,Stereo-seq,False,,39019,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,GSE294759,GSE294759,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,heart tissue,,luna,,Wild-type,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,30094,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919110,,,train,sda-all,samples/GSE294759/GSM8919110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8919111,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,7900,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,GSE294759,GSE294759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,brain organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,35179,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919111,,,train,sda-all,samples/GSE294759/GSM8919111,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM8919112,cartilage,normal,,cartilage tissue,organoid,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,22455,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,GSE294759,GSE294759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002418,cartilage organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,36819,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919112,,,train,sda-all,samples/GSE294759/GSM8919112,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8919113,lung,normal,,lung,organoid,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,4451,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,GSE294759,GSE294759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,30262,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919113,,,train,sda-all,samples/GSE294759/GSM8919113,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.62, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8919114,heart,normal,,heart,organoid,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,11436,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,GSE294759,GSE294759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000948,heart organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,35441,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919114,,,train,sda-all,samples/GSE294759/GSM8919114,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM8919115,other,normal,,blood,organoid,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,167384,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,GSE294759,GSE294759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000178,blood organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,44896,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919115,,,train,sda-all,samples/GSE294759/GSM8919115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.15, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8919116,other,normal,,valve,organoid,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,160793,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,GSE294759,GSE294759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0003978,valve organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,31202,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919116,,,train,sda-all,samples/GSE294759/GSM8919116,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8919117,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,129435,Application of spatial transcriptomics across organoids for a high-resolution spatial whole-transcriptome benchmarking dataset,GSE294759,GSE294759,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,37052,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42164865,,GSM8919117,,,train,sda-all,samples/GSE294759/GSM8919117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8919242,skeletal muscle,perturbation,,plantaris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1030,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,GSE294765,GSE294765,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0011905,plantaris muscle,,luna,,7d post-denervation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.133744305099287,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919242,,,train,sda-all,samples/GSE294765/GSM8919242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8919243,skeletal muscle,perturbation,,plantaris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1062,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,GSE294765,GSE294765,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0011905,plantaris muscle,,luna,,7d post-denervation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.132071264632023,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919243,,,train,sda-all,samples/GSE294765/GSM8919243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8919244,skeletal muscle,normal,,plantaris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1068,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,GSE294765,GSE294765,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0011905,plantaris muscle,,luna,,sham/basal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.1325654264213,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919244,,,train,sda-all,samples/GSE294765/GSM8919244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8919245,skeletal muscle,normal,,plantaris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1286,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,GSE294765,GSE294765,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0011905,plantaris muscle,,luna,,sham/basal,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.131458787906672,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919245,,,train,sda-all,samples/GSE294765/GSM8919245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8919246,skeletal muscle,perturbation,,plantaris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1311,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,GSE294765,GSE294765,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0011905,plantaris muscle,,luna,,7d post-overloading,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.141620034561607,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919246,,,train,sda-all,samples/GSE294765/GSM8919246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8919247,skeletal muscle,perturbation,,plantaris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1169,A skeletal muscle atlas shows neuromuscular junction adaptations to growth and atrophy,GSE294765,GSE294765,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0011905,plantaris muscle,,luna,,7d post-overloading,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.140916120598785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42019489,,GSM8919247,,,train,sda-all,samples/GSE294765/GSM8919247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8921746,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,microDBiT,False,,2485,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,GSE294814,GSE294814,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,microDBiT,,,spot,69648,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM8921746,,,val,sda-all,samples/GSE294814/GSM8921746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8921747,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,microDBiT,False,,2488,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,GSE294814,GSE294814,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,microDBiT,,,spot,72145,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM8921747,,,val,sda-all,samples/GSE294814/GSM8921747,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8921748,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,microDBiT,False,,2496,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,GSE294814,GSE294814,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,microDBiT,,,spot,23585,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM8921748,,,val,sda-all,samples/GSE294814/GSM8921748,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8921749,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,microDBiT,False,,2500,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,GSE294814,GSE294814,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,microDBiT,,,spot,67115,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM8921749,,,val,sda-all,samples/GSE294814/GSM8921749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8921750,small intestine,normal,,intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,microDBiT,False,,2500,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,GSE294814,GSE294814,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,intestine,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,microDBiT,,,spot,28198,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM8921750,,,val,sda-all,samples/GSE294814/GSM8921750,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8921752,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,microDBiT,False,,2498,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,GSE294814,GSE294814,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,microDBiT,,,spot,35188,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM8921752,,,val,sda-all,samples/GSE294814/GSM8921752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8921753,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,microDBiT,False,,2493,Spatially resolved profiling of host and bacteria RNAs in mammalian tissue,GSE294814,GSE294814,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,colon,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,microDBiT,,,spot,44662,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM8921753,,,val,sda-all,samples/GSE294814/GSM8921753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8925216,skin,disease,actinic keratosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,False,,1435,Transcriptional signature for dysplastic epidermal development in human pre-malignant skin,GSE294844,GSE294844,9606,Homo sapiens,9606,,False,False,GEO organism is a metagenome label; host species given,human skin metagenome,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005173,manual,actinic keratosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium v2 CytAssist Spatial Gene Expression,,,spot,18085,counts,pixel,4.761904761904762,platform_constant,,WITHHELD,,,image_review_fail,,human_visual_review,FAIL,图像与细胞/spot 错位,"Image registration screen 2026-11-11: the tissue forms two horizontal strips, but the spots form two vertical strips. The image was removed on 2026-11-11. Expression values and coordinates equal the GEO deposit.",,,GSM8925216,,,test,hesrt,samples/GSE294844/GSM8925216,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": null, ""disease_status"": null, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM8925217,skin,disease,actinic keratosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1505,Transcriptional signature for dysplastic epidermal development in human pre-malignant skin,GSE294844,GSE294844,9606,Homo sapiens,9606,,False,False,GEO organism is a metagenome label; host species given,human skin metagenome,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005173,manual,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM8925217,,,test,sda-all,samples/GSE294844/GSM8925217,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": null, ""disease_status"": null, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8925218,skin,disease,actinic keratosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,1706,Transcriptional signature for dysplastic epidermal development in human pre-malignant skin,GSE294844,GSE294844,9606,Homo sapiens,9606,,False,False,GEO organism is a metagenome label; host species given,human skin metagenome,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005173,manual,actinic keratosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium v2 CytAssist Spatial Gene Expression,,,spot,18085,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8925218,,,test,hesrt,samples/GSE294844/GSM8925218,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": null, ""disease_status"": null, ""uberon"": 0.5700000000000001, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8925219,skin,disease,actinic keratosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,921,Transcriptional signature for dysplastic epidermal development in human pre-malignant skin,GSE294844,GSE294844,9606,Homo sapiens,9606,,False,False,GEO organism is a metagenome label; host species given,human skin metagenome,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005173,manual,actinic keratosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium v2 CytAssist Spatial Gene Expression,,,spot,18085,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8925219,,,test,hesrt,samples/GSE294844/GSM8925219,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": null, ""disease_status"": null, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8925221,skin,disease,actinic keratosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium CytAssist,True,H&E,2289,Transcriptional signature for dysplastic epidermal development in human pre-malignant skin,GSE294844,GSE294844,9606,Homo sapiens,9606,,False,False,GEO organism is a metagenome label; host species given,human skin metagenome,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005173,manual,actinic keratosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium v2 CytAssist Spatial Gene Expression,,,spot,18085,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8925221,,,test,hesrt,samples/GSE294844/GSM8925221,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": null, ""disease_status"": null, ""uberon"": 0.46, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8933087,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,435381,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,GSE294965,GSE294965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000109841827768,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933087,,,train,sda-all,samples/GSE294965/GSM8933087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8933088,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,412356,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,GSE294965,GSE294965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49998908138011355,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933088,,,train,sda-all,samples/GSE294965/GSM8933088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8933089,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,351827,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,GSE294965,GSE294965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49999756465832157,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933089,,,train,sda-all,samples/GSE294965/GSM8933089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8933090,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,441503,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,GSE294965,GSE294965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49999106062273085,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933090,,,train,sda-all,samples/GSE294965/GSM8933090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8933091,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,339498,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,GSE294965,GSE294965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000012167226359,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933091,,,train,sda-all,samples/GSE294965/GSM8933091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8933092,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,334451,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,GSE294965,GSE294965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49999032208113964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933092,,,train,sda-all,samples/GSE294965/GSM8933092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8933093,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,317414,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,GSE294965,GSE294965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000097690170198,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,,,,40393992,10.1101/2024.12.18.629206,GSM8933093,,,train,sda-all,samples/GSE294965/GSM8933093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8933094,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,481717,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,GSE294965,GSE294965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000032303080423,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933094,,,train,sda-all,samples/GSE294965/GSM8933094,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8933095,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,307653,Spatio-temporal interaction of immune and renal cells determines glomerular crescent formation in autoimmune kidney disease,GSE294965,GSE294965,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000115027146407,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40393992,,GSM8933095,,,train,sda-all,samples/GSE294965/GSM8933095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8941069,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1980,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,GSE295043,GSE295043,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castracted D10,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.847669641121826,platform_constant,4.847669641121826,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941069,,,train,hesrt,samples/GSE295043/GSM8941069,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8941070,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2385,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,GSE295043,GSE295043,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castracted D10,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.748466199167602,platform_constant,4.748466199167602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941070,,,train,hesrt,samples/GSE295043/GSM8941070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8941071,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2363,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,GSE295043,GSE295043,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castracted D10,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.806746504007534,platform_constant,4.806746504007534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941071,,,train,hesrt,samples/GSE295043/GSM8941071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8941072,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1751,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,GSE295043,GSE295043,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castracted D10,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.806746504007534,platform_constant,4.806746504007534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941072,,,train,hesrt,samples/GSE295043/GSM8941072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8941073,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1185,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,GSE295043,GSE295043,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castracted D20,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.832900309726584,platform_constant,4.832900309726584,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941073,,,train,hesrt,samples/GSE295043/GSM8941073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8941074,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2222,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,GSE295043,GSE295043,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castracted D20,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.70028528954115,platform_constant,4.70028528954115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941074,,,train,hesrt,samples/GSE295043/GSM8941074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8941075,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1693,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,GSE295043,GSE295043,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castracted D20,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.8483700083584464,platform_constant,4.8483700083584464,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941075,,,train,hesrt,samples/GSE295043/GSM8941075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8941076,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1860,A spatiotemporal atlas of orchiectomy-induced modulation of cellular composition and gene expression in the mouse prostate,GSE295043,GSE295043,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,,luna,,Castracted D20,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.7223041042987886,platform_constant,4.7223041042987886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40974890,,GSM8941076,,,train,hesrt,samples/GSE295043/GSM8941076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8941355,brain,disease,cerebral artery occlusion;ischemic stroke,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2842,Gain-of-function PPM1D mutations attenuate ischemic stroke,GSE295060,GSE295060,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0000944;MONDO:1060198,luna,ischemic stroke,Ppm1d knockdown; middle cerebral artery occlusion (MCAO) model induction,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.018033141677578,platform_constant,4.018033141677578,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8941355,,,train,hesrt,samples/GSE295060/GSM8941355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8941356,brain,disease,cerebral artery occlusion;ischemic stroke,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2846,Gain-of-function PPM1D mutations attenuate ischemic stroke,GSE295060,GSE295060,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0000944;MONDO:1060198,luna,ischemic stroke,Wild-type; middle cerebral artery occlusion (MCAO) model induction,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,31053,counts,pixel,4.007650296628716,platform_constant,4.007650296628716,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8941356,,,train,hesrt,samples/GSE295060/GSM8941356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM8941357,skin,normal,,skin of body,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,40371,Utx (Kdm6a) promotes differentiation non-catalytically in somatic self-renewing epithelia [Xenium],GSE295061,GSE295061,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,,,luna,,,luna,not stated,,sample text,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000091352009742,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40372430,,GSM8941357,,,train,sda-all,samples/GSE295061/GSM8941357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.31, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8941358,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,52308,Utx (Kdm6a) promotes differentiation non-catalytically in somatic self-renewing epithelia [Xenium],GSE295061,GSE295061,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,,,luna,,,luna,not stated,,sample text,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999882739212007,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40372430,,GSM8941358,,,train,sda-all,samples/GSE295061/GSM8941358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8943583,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1753,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,58288,counts,pixel,0.3460207612456747,platform_constant,0.49998955888326974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943583,,,train,hesrt,samples/GSE295206/GSM8943583,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943584,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2087,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,58288,counts,pixel,0.3460207612456747,platform_constant,0.49998955888326974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943584,,,train,hesrt,samples/GSE295206/GSM8943584,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943585,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3526,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.3888888888888888,platform_constant,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943585,,,train,hesrt,samples/GSE295206/GSM8943585,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943586,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3586,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.3888888888888888,platform_constant,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943586,,,train,hesrt,samples/GSE295206/GSM8943586,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.99, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943587,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1967,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.3888888888888888,platform_constant,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943587,,,train,hesrt,samples/GSE295206/GSM8943587,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943588,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2911,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.3888888888888888,platform_constant,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943588,,,train,hesrt,samples/GSE295206/GSM8943588,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943589,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3535,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.3888888888888888,platform_constant,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943589,,,train,hesrt,samples/GSE295206/GSM8943589,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943590,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3396,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,1.3888888888888888,platform_constant,1.3888888888888888,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943590,,,train,hesrt,samples/GSE295206/GSM8943590,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943591,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2701,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3460207612456747,platform_constant,0.4999957162054191,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943591,,,train,hesrt,samples/GSE295206/GSM8943591,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943592,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2412,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3460207612456747,platform_constant,0.4999997784474572,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943592,,,train,hesrt,samples/GSE295206/GSM8943592,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943593,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2833,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3460207612456747,platform_constant,0.49999468750110676,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943593,,,train,hesrt,samples/GSE295206/GSM8943593,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943594,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3089,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3460207612456747,platform_constant,0.49999099525829827,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943594,,,train,hesrt,samples/GSE295206/GSM8943594,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943595,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3273,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3460207612456747,platform_constant,0.49998779411062594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943595,,,train,hesrt,samples/GSE295206/GSM8943595,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943596,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3987,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3460207612456747,platform_constant,0.49999824176442453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943596,,,train,hesrt,samples/GSE295206/GSM8943596,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943597,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3315,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3460207612456747,platform_constant,0.49998779411062594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943597,,,train,hesrt,samples/GSE295206/GSM8943597,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8943598,peripheral nerve,disease,diabetes mellitus,dorsal root ganglion,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3907,Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes,GSE295206,GSE295206,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000044,dorsal root ganglia,MONDO:0005015,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,0.3460207612456747,platform_constant,0.5000053563585332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40325011,,GSM8943598,,,train,hesrt,samples/GSE295206/GSM8943598,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8944108,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4185,Excitatory neurons and astrocytes-specific dysregulation and aberrant interactions are vulnerable to FCDI as suggested by single-cell spatial transcriptomics [Spatial transcriptomic],GSE295237,GSE295237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,"temporal neocortex,nonepileptic",,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.9674883836863017,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42068085,,GSM8944108,,,train,sda-all,samples/GSE295237/GSM8944108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8944109,brain,normal,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4338,Excitatory neurons and astrocytes-specific dysregulation and aberrant interactions are vulnerable to FCDI as suggested by single-cell spatial transcriptomics [Spatial transcriptomic],GSE295237,GSE295237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,"temporal neocortex,nonepileptic",,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.987701931773198,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42068085,,GSM8944109,,,train,sda-all,samples/GSE295237/GSM8944109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8944110,brain,disease,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2571,Excitatory neurons and astrocytes-specific dysregulation and aberrant interactions are vulnerable to FCDI as suggested by single-cell spatial transcriptomics [Spatial transcriptomic],GSE295237,GSE295237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,"temporal neocortex,epileptogenic",,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,4.065557313238917,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42068085,,GSM8944110,,,train,sda-all,samples/GSE295237/GSM8944110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8944111,brain,disease,,temporal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2709,Excitatory neurons and astrocytes-specific dysregulation and aberrant interactions are vulnerable to FCDI as suggested by single-cell spatial transcriptomics [Spatial transcriptomic],GSE295237,GSE295237,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016538,"temporal neocortex,epileptogenic",,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,3.9876324666462875,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42068085,,GSM8944111,,,train,sda-all,samples/GSE295237/GSM8944111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684470,liver,disease,infectious disease,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),999,"Genomic and transcriptomic feature of HBV integration in treatment-naïve, HBeAg-positive children with chronic HBV infection",GSE295275,GSE295275,9606,Homo sapiens,9606,Hepatitis B virus,False,False,GEO lists only a non-host organism; host from the features' Ensembl gene IDs,Hepatitis B virus,Homo sapiens,luna,UBERON:0002107,liver tissue,MONDO:0005550,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.409785507339969,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9684470,,,val,sda-all,samples/GSE295275/GSM9684470,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9684471,liver,disease,infectious disease,liver,primary tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),822,"Genomic and transcriptomic feature of HBV integration in treatment-naïve, HBeAg-positive children with chronic HBV infection",GSE295275,GSE295275,9606,Homo sapiens,9606,Hepatitis B virus,False,False,GEO lists only a non-host organism; host from the features' Ensembl gene IDs,Hepatitis B virus,Homo sapiens,luna,UBERON:0002107,liver tissue,MONDO:0005550,luna,,,luna,juvenile,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.408772131960675,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9684471,,,val,sda-all,samples/GSE295275/GSM9684471,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM8953673,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,False,,676589,Dermal adipocytes activate hair follicle stem cells through metabolic communication [SP],GSE295606,GSE295606,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,32285,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41130201,,GSM8953673,,,train,sda-all,samples/GSE295606/GSM8953673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM8953674,skin,normal,,skin of body,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,False,,662864,Dermal adipocytes activate hair follicle stem cells through metabolic communication [SP],GSE295606,GSE295606,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,Skin,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,32285,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41130201,,GSM8953674,,,train,sda-all,samples/GSE295606/GSM8953674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.35000000000000003, ""life_stage"": 0.89}",disease_status;uberon,low_confidence_annotation
GSM8953773,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2195,"Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing (Spatial Transcriptomics, part 2)",GSE295619,GSE295619,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.793297366107948,platform_constant,4.793297366107948,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40719154,,GSM8953773,,,train,hesrt,samples/GSE295619/GSM8953773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8953774,lung,disease,pulmonary fibrosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2607,"Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing (Spatial Transcriptomics, part 2)",GSE295619,GSE295619,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0002771,luna,pulmonary fibrosis,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.798295640664582,platform_constant,4.798295640664582,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40719154,,GSM8953774,,,train,hesrt,samples/GSE295619/GSM8953774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956239,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,68273,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.500010350742296,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956239,,,train,sda-all,samples/GSE295730/GSM8956239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956240,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,101272,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.4999883510225213,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956240,,,train,sda-all,samples/GSE295730/GSM8956240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956241,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,109734,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.4999909420289855,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956241,,,train,sda-all,samples/GSE295730/GSM8956241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956242,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,94906,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.5000103528242504,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956242,,,train,sda-all,samples/GSE295730/GSM8956242,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956243,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,106573,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.49998619852048143,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956243,,,train,sda-all,samples/GSE295730/GSM8956243,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956244,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,105300,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.4999922336129233,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956244,,,train,sda-all,samples/GSE295730/GSM8956244,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956245,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,102812,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,541,counts,um,1.0,verified,0.49999547007662043,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956245,,,train,sda-all,samples/GSE295730/GSM8956245,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956246,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,89177,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,541,counts,um,1.0,verified,0.4999979297780722,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956246,,,train,sda-all,samples/GSE295730/GSM8956246,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956247,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,92567,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,541,counts,um,1.0,verified,0.49999447879858655,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956247,,,train,sda-all,samples/GSE295730/GSM8956247,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956248,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,97669,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,541,counts,um,1.0,verified,0.49999935283458447,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956248,,,train,sda-all,samples/GSE295730/GSM8956248,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956249,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,151579,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,541,counts,um,1.0,verified,0.500002760905577,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956249,,,train,sda-all,samples/GSE295730/GSM8956249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8956250,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,94784,Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction,GSE295730,GSE295730,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,541,counts,um,1.0,verified,0.4999922336129233,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40903586,,GSM8956250,,,train,sda-all,samples/GSE295730/GSM8956250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8958026,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,11578,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,GSE295815,GSE295815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,head; forebrain,,luna,,wildtype,age rule: embryonic day,embryonic,E12.5,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,STOmics,,,bin,31170,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8958026,,,train,sda-all,samples/GSE295815/GSM8958026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8958028,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,10513,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,GSE295815,GSE295815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,head; forebrain,,luna,,Dlx1/Dlx2 double knockout,age rule: embryonic day,embryonic,E12.5,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,STOmics,,,bin,32828,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8958028,,,train,sda-all,samples/GSE295815/GSM8958028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8958029,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,16736,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,GSE295815,GSE295815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,head; forebrain,,luna,,wildtype,age rule: embryonic day,embryonic,E13.5,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,STOmics,,,bin,31865,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8958029,,,train,sda-all,samples/GSE295815/GSM8958029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8958030,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,20650,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,GSE295815,GSE295815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,head; forebrain,,luna,,Dlx1/Dlx2 double knockout,age rule: embryonic day,embryonic,E13.5,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,STOmics,,,bin,35300,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8958030,,,train,sda-all,samples/GSE295815/GSM8958030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8958031,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,20524,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,GSE295815,GSE295815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,head; forebrain,,luna,,Dlx1/Dlx2 double knockout,age rule: embryonic day,embryonic,E13.5,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,STOmics,,,bin,34680,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8958031,,,train,sda-all,samples/GSE295815/GSM8958031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8958032,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,35768,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,GSE295815,GSE295815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,head; forebrain,,luna,,wildtype,age rule: embryonic day,embryonic,E13.5,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,STOmics,,,bin,34276,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8958032,,,train,sda-all,samples/GSE295815/GSM8958032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8958033,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,26238,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,GSE295815,GSE295815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,head; forebrain,,luna,,Dlx1/Dlx2 double knockout,age rule: embryonic day,embryonic,E13.5,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,STOmics,,,bin,34688,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8958033,,,train,sda-all,samples/GSE295815/GSM8958033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8958034,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,32001,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,GSE295815,GSE295815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,head; forebrain,,luna,,wildtype,age rule: embryonic day,embryonic,E14.5,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,STOmics,,,bin,34175,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8958034,,,train,sda-all,samples/GSE295815/GSM8958034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8958036,brain,perturbation,,forebrain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Stereo-seq,Stereo-seq,False,,27490,The DLX/Notch axis is necessary for spatiotemporal regulation of neural cell fate,GSE295815,GSE295815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001890,head; forebrain,,luna,,Dlx1/Dlx2 double knockout,age rule: embryonic day,embryonic,E14.5,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,STOmics,,,bin,33075,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM8958036,,,train,sda-all,samples/GSE295815/GSM8958036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM8959870,adipose tissue,disease,obesity disorder,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,2894,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,MONDO:0011122,luna,,Obese,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999988532110091,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959870,,,train,sda-all,samples/GSE295862/GSM8959870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8959871,adipose tissue,disease,obesity disorder,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,2951,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,MONDO:0011122,luna,,Obese,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000125973431058,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959871,,,train,sda-all,samples/GSE295862/GSM8959871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8959872,adipose tissue,disease,obesity disorder,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,3156,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,MONDO:0011122,luna,,Obese,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103012544639,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959872,,,train,sda-all,samples/GSE295862/GSM8959872,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8959873,adipose tissue,disease,obesity disorder,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,2663,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,MONDO:0011122,luna,,Obese,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999781468531469,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959873,,,train,sda-all,samples/GSE295862/GSM8959873,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8959874,adipose tissue,disease,obesity disorder,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,7898,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,MONDO:0011122,mondo_predicate (Luna: perturbation),,Weight Loss,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999934284641382,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959874,,,train,sda-all,samples/GSE295862/GSM8959874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8959875,adipose tissue,disease,overnutrition,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,4860,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,MONDO:0003916,luna,,Weight Loss,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896855230586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959875,,,train,sda-all,samples/GSE295862/GSM8959875,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8959876,adipose tissue,disease,obesity disorder,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,7610,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,MONDO:0011122,luna,,Weight Loss,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000168855534709,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959876,,,train,sda-all,samples/GSE295862/GSM8959876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8959877,adipose tissue,disease,obesity disorder,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,10372,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,MONDO:0011122,mondo_predicate (Luna: perturbation),,Weight Loss,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000180115273775,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959877,,,train,sda-all,samples/GSE295862/GSM8959877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8959878,adipose tissue,normal,,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,6059,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,,luna,,Lean,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959878,,,train,sda-all,samples/GSE295862/GSM8959878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8959879,adipose tissue,normal,,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,2711,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,,luna,,Lean,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000250501002004,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959879,,,train,sda-all,samples/GSE295862/GSM8959879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8959880,adipose tissue,normal,,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,4144,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,,luna,,Lean,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499983977293536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959880,,,train,sda-all,samples/GSE295862/GSM8959880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8959881,adipose tissue,normal,,adipose tissue,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,5663,Selective remodelling of the adipose niche in obesity and weight loss [Xenium],GSE295862,GSE295862,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001013,Periumbilical Adipose Tissue,,luna,,Lean,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999484642341785,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40634602,,GSM8959881,,,train,sda-all,samples/GSE295862/GSM8959881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8962609,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2987,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,Vehicle,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.3496786098020666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962609,,,train,sda-all,samples/GSE295967/GSM8962609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8962610,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2951,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,Vehicle,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.787454116576571,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962610,,,train,sda-all,samples/GSE295967/GSM8962610,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962611,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2830,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,AMG 510,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.7864810138436065,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962611,,,train,sda-all,samples/GSE295967/GSM8962611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962612,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2552,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,AMG 510,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.784932514314309,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962612,,,train,sda-all,samples/GSE295967/GSM8962612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962613,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1992,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,AMG 510 + anti-PD-1,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.542941496166603,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962613,,,train,sda-all,samples/GSE295967/GSM8962613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962614,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2325,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,AMG 510 + anti-PD-1,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.543027236420451,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962614,,,train,sda-all,samples/GSE295967/GSM8962614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962615,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2458,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,Anti-PD-1,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.542136399819411,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962615,,,train,sda-all,samples/GSE295967/GSM8962615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962616,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2419,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,Anti-PD-1,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.542499449109821,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962616,,,train,sda-all,samples/GSE295967/GSM8962616,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962617,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1921,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,AMG 510 + anti-PD-1,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.541927340302814,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962617,,,train,sda-all,samples/GSE295967/GSM8962617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962618,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2076,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,AMG 510 + anti-PD-1,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.543026152518852,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962618,,,train,sda-all,samples/GSE295967/GSM8962618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962619,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2945,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,Anti-PD-1,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.54210864966555,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962619,,,train,sda-all,samples/GSE295967/GSM8962619,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962620,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3007,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,Anti-PD-1,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.542079411467902,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962620,,,train,sda-all,samples/GSE295967/GSM8962620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962621,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1694,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,Vehicle,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.327319890613411,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962621,,,train,sda-all,samples/GSE295967/GSM8962621,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962622,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1684,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,Vehicle,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.327647256379862,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962622,,,train,sda-all,samples/GSE295967/GSM8962622,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM8962623,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2008,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,AMG 510,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.327379063551647,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962623,,,train,sda-all,samples/GSE295967/GSM8962623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8962624,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1974,Single-cell multi-omics reveal coordinated neoplastic and immune remodeling following KRAS inhibition [Spatial Transcriptomics],GSE295967,GSE295967,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Implanted CT26-KRAS-G12C tumors into Balb/C mice,MONDO:0005070,luna,,AMG 510,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.3273368721226975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8962624,,,train,sda-all,samples/GSE295967/GSM8962624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9394258,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,384151,Eosinophils Orchestrate Intestinal Remodeling and Promote Innate Defense During Reproduction,GSE296053,GSE296053,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,nulliparous,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.3.0.1,cell,13780,counts,um,1.0,verified,0.4999933463449254,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,42129565,,GSM9394258,,,train,sda-all,samples/GSE296053/GSM9394258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9394259,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,412822,Eosinophils Orchestrate Intestinal Remodeling and Promote Innate Defense During Reproduction,GSE296053,GSE296053,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,nulliparous,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.3.0.1,cell,13780,counts,um,1.0,verified,0.5000023861033341,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,42129565,,GSM9394259,,,train,sda-all,samples/GSE296053/GSM9394259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9394260,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,609695,Eosinophils Orchestrate Intestinal Remodeling and Promote Innate Defense During Reproduction,GSE296053,GSE296053,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,lactating,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.3.0.1,cell,13780,counts,um,1.0,verified,0.5000030456605429,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,42129565,,GSM9394260,,,train,sda-all,samples/GSE296053/GSM9394260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9394261,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,613501,Eosinophils Orchestrate Intestinal Remodeling and Promote Innate Defense During Reproduction,GSE296053,GSE296053,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,lactating,luna,adult,,not stated,,,,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.3.0.1,cell,13780,counts,um,1.0,verified,0.5000085249415432,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,42129565,,GSM9394261,,,train,sda-all,samples/GSE296053/GSM9394261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM8965605,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,81675,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,GSE296134,GSE296134,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,"brain, forebrain",,luna,,,luna,adult,adult,extracted field,M,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.500015060240964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965605,,,test,sda-all,samples/GSE296134/GSM8965605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 0.98}",,
GSM8965606,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,101394,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,GSE296134,GSE296134,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,"brain, forebrain",,luna,,,luna,adult,adult,extracted field,F,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.5000088422541853,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965606,,,test,sda-all,samples/GSE296134/GSM8965606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 0.99}",,
GSM8965607,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,99608,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,GSE296134,GSE296134,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,"brain, forebrain",,luna,,,luna,adult,adult,extracted field,M,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999941023826374,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965607,,,test,sda-all,samples/GSE296134/GSM8965607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8965608,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,93700,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,GSE296134,GSE296134,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,"brain, forebrain",,luna,,,luna,adult,adult,extracted field,F,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49999448914361294,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965608,,,test,sda-all,samples/GSE296134/GSM8965608,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM8965609,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,97546,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,GSE296134,GSE296134,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,"brain, forebrain",,luna,,,luna,adult,adult,extracted field,F,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999890158172232,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965609,,,test,sda-all,samples/GSE296134/GSM8965609,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8965610,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,99260,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,GSE296134,GSE296134,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,"brain, forebrain",,luna,,,luna,adult,adult,extracted field,F,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.500001376121539,VERIFIED,VERIFIED,FAILED,,,VERIFIED,PASS,,,40780964,,GSM8965610,,,test,sda-all,samples/GSE296134/GSM8965610,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM8965611,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,128859,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,GSE296134,GSE296134,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,"brain, forebrain",,luna,,,luna,adult,adult,extracted field,M,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.49999597330878964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965611,,,test,sda-all,samples/GSE296134/GSM8965611,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM8965612,brain,normal,,forebrain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,126621,Single cell approaches define the murine leptomeninges:cortical brain interface as a  distinct cellular neighborhood comprised of neural and nonneural cell types,GSE296134,GSE296134,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001890,"brain, forebrain",,luna,,,luna,adult,adult,extracted field,F,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-1.9.0.0,cell,541,counts,um,1.0,verified,0.499992892220212,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40780964,,GSM8965612,,,test,sda-all,samples/GSE296134/GSM8965612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM8967906,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,43522,Distinct tissue niches contribute to prostate TRM cell differentiation and heterogeneity [Spatial Transcriptomics],GSE296275,GSE296275,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,,luna,,LCMV Armstrong,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103637682661,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8967906,,,train,sda-all,samples/GSE296275/GSM8967906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8967907,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,34077,Distinct tissue niches contribute to prostate TRM cell differentiation and heterogeneity [Spatial Transcriptomics],GSE296275,GSE296275,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,,luna,,LCMV Armstrong,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000059999127285,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8967907,,,train,sda-all,samples/GSE296275/GSM8967907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8967908,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55204,Distinct tissue niches contribute to prostate TRM cell differentiation and heterogeneity [Spatial Transcriptomics],GSE296275,GSE296275,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,,luna,,LCMV Armstrong,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999882739212007,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8967908,,,train,sda-all,samples/GSE296275/GSM8967908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8967909,prostate,perturbation,,prostate gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,59574,Distinct tissue niches contribute to prostate TRM cell differentiation and heterogeneity [Spatial Transcriptomics],GSE296275,GSE296275,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,Prostate,,luna,,LCMV Armstrong,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999020461471483,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM8967909,,,train,sda-all,samples/GSE296275/GSM8967909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968321,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: red (heuristic),3177,Transient Senescence Following Myocardial Infarction: Characterization and Functional Implications in Cardiac Remodeling [SpatialTranscriptome],GSE296301,GSE296301,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,frozen heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.5033931959358457,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain and modality should be stated; this is not H&E,,,GSM8968321,,,train,sda-all,samples/GSE296301/GSM8968321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968322,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: green (heuristic),2972,Transient Senescence Following Myocardial Infarction: Characterization and Functional Implications in Cardiac Remodeling [SpatialTranscriptome],GSE296301,GSE296301,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,frozen heart,MONDO:0005068,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,3.657975293332807,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain and modality should be stated; this is not H&E,,,GSM8968322,,,train,sda-all,samples/GSE296301/GSM8968322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8968701,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,219675,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],GSE296331,GSE296331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small Intestine,MONDO:0005011,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000095401640908,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968701,,,val,sda-all,samples/GSE296331/GSM8968701,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968702,small intestine,normal,,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,50588,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],GSE296331,GSE296331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small Intestine,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999755053630363,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968702,,,val,sda-all,samples/GSE296331/GSM8968702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968703,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,220389,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],GSE296331,GSE296331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small Intestine,MONDO:0005011,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999967273203299,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968703,,,val,sda-all,samples/GSE296331/GSM8968703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8968704,small intestine,normal,,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,141177,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],GSE296331,GSE296331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small Intestine,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103259833514,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968704,,,val,sda-all,samples/GSE296331/GSM8968704,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968705,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,242022,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],GSE296331,GSE296331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small Intestine,MONDO:0005011,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103436261486,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968705,,,val,sda-all,samples/GSE296331/GSM8968705,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968706,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,92990,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],GSE296331,GSE296331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small Intestine,MONDO:0005011,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000025815778604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968706,,,val,sda-all,samples/GSE296331/GSM8968706,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968707,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,150072,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],GSE296331,GSE296331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small Intestine,MONDO:0005011,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000168855534709,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968707,,,val,sda-all,samples/GSE296331/GSM8968707,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8968708,small intestine,normal,,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,50732,Creeping fat-derived mechanosensitive fibroblasts drive intestinal fibrosis in Crohn’s disease strictures [Xenium],GSE296331,GSE296331,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small Intestine,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000009392846408,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40967215,,GSM8968708,,,val,sda-all,samples/GSE296331/GSM8968708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8969380,brain,normal,,cerebellum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3222,Region- and cell type-specific changes in gene expression in the cerebellum after classical fear conditioning [Spatial Transcriptomics],GSE296375,GSE296375+GSE296509,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Cerebellum,,luna,,Home cage,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.061786265515847,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42032255,,GSM8969380,,,train,sda-all,samples/GSE296375/GSM8969380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8969381,brain,perturbation,,cerebellum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3349,Region- and cell type-specific changes in gene expression in the cerebellum after classical fear conditioning [Spatial Transcriptomics],GSE296375,GSE296375+GSE296509,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Cerebellum,,luna,,Fear conditioned,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.059971660491136,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42032255,,GSM8969381,,,train,sda-all,samples/GSE296375/GSM8969381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8969382,brain,normal,,cerebellum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3542,Region- and cell type-specific changes in gene expression in the cerebellum after classical fear conditioning [Spatial Transcriptomics],GSE296375,GSE296375+GSE296509,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Cerebellum,,luna,,After auditory memory retrieval,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.06051235368232,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42032255,,GSM8969382,,,train,sda-all,samples/GSE296375/GSM8969382,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8970260,lung,normal,,lung,organoid,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,672776,Spatial transcriptomic analysis of transplanted vascularized lung organoids,GSE296429,GSE296429,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,47317,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM8970260,,,train,sda-all,samples/GSE296429/GSM8970260,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8970745,heart,disease,myocarditis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,806,IL-1 Signaling Blockade in Human Lymphocytic Myocarditis,GSE296452,GSE296452,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,endomyocardial biopsy tissue,MONDO:0004496,luna,lymphocytic myocarditis,before rilonacept,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,3.498558798197807,platform_constant,3.498558798197807,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40600280,,GSM8970745,,,train,hesrt,samples/GSE296452/GSM8970745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8970746,heart,disease,myocarditis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1277,IL-1 Signaling Blockade in Human Lymphocytic Myocarditis,GSE296452,GSE296452,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,endomyocardial biopsy tissue,MONDO:0004496,luna,lymphocytic myocarditis,after rilonacept,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,3.4953720950183635,platform_constant,3.4953720950183635,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40600280,,GSM8970746,,,train,hesrt,samples/GSE296452/GSM8970746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8970755,head and neck,normal,,inferior vagus X ganglion,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,23872,A spatio-cellular map of the mouse nodose ganglia,GSE296454,GSE296454,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uberon_chain,UBERON:0005363,Left Nodose Ganglion,,luna,,Ad libitum fed,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide_seq,,,bead,19434,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42483274,,GSM8970755,,,test,sda-all,samples/GSE296454/GSM8970755,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8970756,head and neck,normal,,inferior vagus X ganglion,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,37182,A spatio-cellular map of the mouse nodose ganglia,GSE296454,GSE296454,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uberon_chain,UBERON:0005363,Left Nodose Ganglion,,luna,,Ad libitum fed,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide_seq,,,bead,21926,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42483274,,GSM8970756,,,test,sda-all,samples/GSE296454/GSM8970756,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8970757,head and neck,normal,,inferior vagus X ganglion,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,21953,A spatio-cellular map of the mouse nodose ganglia,GSE296454,GSE296454,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uberon_chain,UBERON:0005363,Right Nodose Ganglion,,luna,,Ad libitum fed,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide_seq,,,bead,20766,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42483274,,GSM8970757,,,test,sda-all,samples/GSE296454/GSM8970757,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8972045,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,72864,Interrogating the Synergistic Potential of Gemcitabine and Focused Ultrasound–Induced Thermal Ablation in Breast Cancer: Insights from the BR54 Trial via Spatial Transcriptomics,GSE296517,GSE296517,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,,MONDO:0005494,luna,Triple‑negative breast cancer (TNBC),,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8972045,,,train,sda-all,samples/GSE296517/GSM8972045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8972046,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,90210,Interrogating the Synergistic Potential of Gemcitabine and Focused Ultrasound–Induced Thermal Ablation in Breast Cancer: Insights from the BR54 Trial via Spatial Transcriptomics,GSE296517,GSE296517,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,,MONDO:0005494,luna,Triple‑negative breast cancer (TNBC),,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8972046,,,train,sda-all,samples/GSE296517/GSM8972046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8972049,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,female,CosMx,CosMx,False,,99231,Interrogating the Synergistic Potential of Gemcitabine and Focused Ultrasound–Induced Thermal Ablation in Breast Cancer: Insights from the BR54 Trial via Spatial Transcriptomics,GSE296517,GSE296517,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,,MONDO:0007254,luna,"Hormone receptor‑positive, HER2‑negative",,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM8972049,,,train,sda-all,samples/GSE296517/GSM8972049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8972327,liver,disease,hepatocellular carcinoma;metabolic dysfunction-associated steatohepatitis,liver,tumour tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4821,Spatial transcriptomic profiling of gene expression alterations following ACBP/DBI inhibition in a MASH-Driven HCC mouse model,GSE296545,GSE296545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007256;MONDO:0007027,luna,hepatocellular carcinoma,Dbi+/+,luna,not stated,,extracted field,male,GSE296545:donor_Dbi_plus,donor_Dbi_plus,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,10.888565393644384,platform_constant,10.888565393644384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40628264,10.1016/j.xcrm.2025.102232,GSM8972327,,,train,hesrt,samples/GSE296545/GSM8972327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM8972328,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4395,Spatial transcriptomic profiling of gene expression alterations following ACBP/DBI inhibition in a MASH-Driven HCC mouse model,GSE296545,GSE296545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027;MONDO:0007256,luna,hepatocellular carcinoma,Dbi-/-,luna,not stated,,extracted field,male,GSE296545:donor_Dbi_minus,donor_Dbi_minus,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,7.321293005268512,platform_constant,7.321293005268512,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40628264,10.1016/j.xcrm.2025.102232,GSM8972328,,,train,hesrt,samples/GSE296545/GSM8972328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.72, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8972329,liver,disease,hepatocellular carcinoma;metabolic dysfunction-associated steatohepatitis,liver,tumour tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4992,Spatial transcriptomic profiling of gene expression alterations following ACBP/DBI inhibition in a MASH-Driven HCC mouse model,GSE296545,GSE296545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007256;MONDO:0007027,luna,hepatocellular carcinoma,KLH,luna,not stated,,extracted field,male,GSE296545:donor_KLH,donor_KLH,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,8.029829257599834,platform_constant,8.029829257599834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40628264,10.1016/j.xcrm.2025.102232,GSM8972329,,,train,hesrt,samples/GSE296545/GSM8972329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM8972330,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,4664,Spatial transcriptomic profiling of gene expression alterations following ACBP/DBI inhibition in a MASH-Driven HCC mouse model,GSE296545,GSE296545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027;MONDO:0007256,luna,hepatocellular carcinoma,KLH-ACBP,luna,not stated,,extracted field,male,GSE296545:donor_KLH_ACBP,donor_KLH_ACBP,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32589,counts,pixel,7.193718704158121,platform_constant,7.193718704158121,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40628264,10.1016/j.xcrm.2025.102232,GSM8972330,,,train,hesrt,samples/GSE296545/GSM8972330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448977,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6701,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.49999230137548756,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448977,,,train,sda-all,samples/GSE296577/GSM9448977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448978,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,2945,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.49999230137548756,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448978,,,train,sda-all,samples/GSE296577/GSM9448978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448979,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,57012,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,CAN-3110,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000155012056493,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448979,,,train,sda-all,samples/GSE296577/GSM9448979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448980,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,11762,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.5000102613216582,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448980,,,train,sda-all,samples/GSE296577/GSM9448980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448981,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,2424,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.49995580636388354,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448981,,,train,sda-all,samples/GSE296577/GSM9448981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448982,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1089,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.5000455097087378,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448982,,,train,sda-all,samples/GSE296577/GSM9448982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448983,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,284177,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,CAN-3110,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999959858702633,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448983,,,train,sda-all,samples/GSE296577/GSM9448983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448984,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24116,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.4999778881480474,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448984,,,train,sda-all,samples/GSE296577/GSM9448984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448985,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,152188,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,CAN-3110,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999951074193268,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448985,,,train,sda-all,samples/GSE296577/GSM9448985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448986,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,8105,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.5000487379437718,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448986,,,train,sda-all,samples/GSE296577/GSM9448986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448987,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,180768,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,CAN-3110,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41679299,,GSM9448987,,,train,sda-all,samples/GSE296577/GSM9448987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448988,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1997,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.500091389114541,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448988,,,train,sda-all,samples/GSE296577/GSM9448988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448989,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,69302,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.49998619420156465,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448989,,,train,sda-all,samples/GSE296577/GSM9448989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9448990,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,785959,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,recurrent glioblastoma,CAN-3110,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.50000859421552,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448990,,,train,sda-all,samples/GSE296577/GSM9448990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9448991,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,28554,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.49998903615632,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448991,,,train,sda-all,samples/GSE296577/GSM9448991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448992,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,346305,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,CAN-3110,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.4999971364427746,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448992,,,train,sda-all,samples/GSE296577/GSM9448992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9448993,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,56418,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.5000065413632201,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448993,,,train,sda-all,samples/GSE296577/GSM9448993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9448994,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,361691,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,CAN-3110,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.5000012937949594,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448994,,,train,sda-all,samples/GSE296577/GSM9448994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448995,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7065,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,pre-treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.5000073659398939,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448995,,,train,sda-all,samples/GSE296577/GSM9448995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9448996,brain,disease,brain neoplasm;glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,668986,Persistent T cell Activation and Cytotoxicity against Glioblastoma Following Single Oncolytic Virus Treatment in a Clinical Trial,GSE296577,GSE296577,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain tumor,MONDO:0021211;MONDO:0018177,luna,,CAN-3110,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hBrain_100g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.500008143676164,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41679299,,GSM9448996,,,train,sda-all,samples/GSE296577/GSM9448996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8972899,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1530,Mouse uterine gene expressions during decidual processes [Visium],GSE296581,GSE296581,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Mouse uterus,,luna,,Wwtr1-flox/flox,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.28016670923205,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42154563,,GSM8972899,,,train,sda-all,samples/GSE296581/GSM8972899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM8972900,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),478,Mouse uterine gene expressions during decidual processes [Visium],GSE296581,GSE296581,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Mouse uterus,,luna,,Wwtr1-flox/flox,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.280351200466475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42154563,,GSM8972900,,,train,sda-all,samples/GSE296581/GSM8972900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM8972901,uterus,perturbation,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),946,Mouse uterine gene expressions during decidual processes [Visium],GSE296581,GSE296581,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Mouse uterus,,luna,,Wwtr1-flox/flox;Pgr-Cre/+,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.279248130479928,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42154563,,GSM8972901,,,train,sda-all,samples/GSE296581/GSM8972901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM8972902,uterus,perturbation,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),854,Mouse uterine gene expressions during decidual processes [Visium],GSE296581,GSE296581,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Mouse uterus,,luna,,Wwtr1-flox/flox;Pgr-Cre/+,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.27894061130153,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42154563,,GSM8972902,,,train,sda-all,samples/GSE296581/GSM8972902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 0.78}",,
GSM8972903,pancreas,disease,acute pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,353,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,GSE296582,GSE296582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0006515,luna,pancreatitis,"HBP1flox/flox, 24hrs after cerulein",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.506609184699931,platform_constant,3.506609184699931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972903,,,train,hesrt,samples/GSE296582/GSM8972903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8972904,pancreas,disease,acute pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,324,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,GSE296582,GSE296582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0006515,luna,pancreatitis,"HBP1flox/flox, 24hrs after cerulein",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.5048829735743756,platform_constant,3.5048829735743756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972904,,,train,hesrt,samples/GSE296582/GSM8972904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8972905,pancreas,disease,acute pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,714,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,GSE296582,GSE296582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0006515,luna,pancreatitis,"HBP1flox/flox, 48hrs after cerulein",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.512246796993695,platform_constant,3.512246796993695,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972905,,,train,hesrt,samples/GSE296582/GSM8972905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8972906,pancreas,disease,acute pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1323,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,GSE296582,GSE296582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0006515,luna,pancreatitis,"p48Cre; HBP1flox/flox, 24hrs after cerulein",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.5153807535271304,platform_constant,3.5153807535271304,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972906,,,train,hesrt,samples/GSE296582/GSM8972906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8972907,pancreas,disease,acute pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1646,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,GSE296582,GSE296582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0006515,luna,pancreatitis,"p48Cre; HBP1flox/flox, 24hrs after cerulein",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.5846816930593994,platform_constant,3.5846816930593994,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972907,,,train,hesrt,samples/GSE296582/GSM8972907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8972908,pancreas,disease,acute pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,736,HMG Box-Containing Protein 1 (HBP1) Protects Against Pancreatic Injury in Acute Pancreatitis but Promotes Neoplastic Progression,GSE296582,GSE296582,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,pancreas,MONDO:0006515,luna,pancreatitis,"p48Cre; HBP1flox/flox, 48hrs after cerulein",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.5800608894606607,platform_constant,3.5800608894606607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40404099,,GSM8972908,,,train,hesrt,samples/GSE296582/GSM8972908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973624,brain,disease,hemorrhagic stroke,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Stereo-seq,Stereo-seq,False,,191144,Clearance of intracranial debris by ultrasound reduces inflammation and improves outcomes in hemorrhagic stroke models,GSE296613,GSE296613,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:1060199,luna,,ICH + UCC,age rule: age with unit,adult,3-4 month old,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,48051,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41214344,,GSM8973624,,,val,sda-all,samples/GSE296613/GSM8973624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973625,brain,disease,hemorrhagic stroke,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Stereo-seq,Stereo-seq,False,,201398,Clearance of intracranial debris by ultrasound reduces inflammation and improves outcomes in hemorrhagic stroke models,GSE296613,GSE296613,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:1060199,luna,,ICH,age rule: age with unit,adult,3-4 month old,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,48679,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41214344,,GSM8973625,,,val,sda-all,samples/GSE296613/GSM8973625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8973626,brain,disease,cerebrovascular disorder,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Stereo-seq,Stereo-seq,False,,203603,Clearance of intracranial debris by ultrasound reduces inflammation and improves outcomes in hemorrhagic stroke models,GSE296613,GSE296613,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0011057,mondo_predicate (Luna: perturbation),,UCC,age rule: age with unit,adult,3-4 month old,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,46780,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41214344,,GSM8973626,,,val,sda-all,samples/GSE296613/GSM8973626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973627,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Stereo-seq,Stereo-seq,False,,198697,Clearance of intracranial debris by ultrasound reduces inflammation and improves outcomes in hemorrhagic stroke models,GSE296613,GSE296613,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,C57BL/6NCrl,age rule: age with unit,adult,3-4 month old,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,46247,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41214344,,GSM8973627,,,val,sda-all,samples/GSE296613/GSM8973627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973720,other,disease,breast cancer,,engineered tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,388785,Protocol for single-cell spatial transcriptomic profiling of cultured cells and engineered tissues without embedding or sectioning,GSE296623,GSE296623,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Engineered in vitro model,MONDO:0007254,mondo_predicate,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40938748,,GSM8973720,,,train,hesrt,samples/GSE296623/GSM8973720,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973744,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,9576,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,Non-Diabetic,Non-Diabetic,luna,not stated,,not stated,,GSE296626:HPAP012,HPAP012,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,9.81818166894559,platform_constant,9.81818166894559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973744,,,train,hesrt,samples/GSE296626/GSM8973744,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM8973745,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,7208,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,Non-Diabetic,Non-Diabetic,luna,not stated,,not stated,,GSE296626:HPAP034,HPAP034,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.167596790927616,platform_constant,6.167596790927616,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973745,,,train,hesrt,samples/GSE296626/GSM8973745,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973746,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,7898,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,Non-Diabetic,Non-Diabetic,luna,not stated,,not stated,,GSE296626:HPAP036,HPAP036,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.3043165150266445,platform_constant,6.3043165150266445,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973746,,,train,hesrt,samples/GSE296626/GSM8973746,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973747,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,5362,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,Non-Diabetic,Non-Diabetic,luna,not stated,,not stated,,GSE296626:HPAP095,HPAP095,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.304316515026605,platform_constant,6.304316515026605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973747,,,train,hesrt,samples/GSE296626/GSM8973747,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973748,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,8739,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,Non-Diabetic,Non-Diabetic,luna,not stated,,not stated,,GSE296626:HPAP110,HPAP110,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.73753098388378,platform_constant,8.73753098388378,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973748,,,train,hesrt,samples/GSE296626/GSM8973748,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973749,pancreas,disease,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,5721,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP019,HPAP019,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.260597527984167,platform_constant,5.260597527984167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973749,,,train,hesrt,samples/GSE296626/GSM8973749,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM8973750,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,9534,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,,luna,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP072,HPAP072,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.725492433703774,platform_constant,8.725492433703774,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973750,,,train,hesrt,samples/GSE296626/GSM8973750,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973751,pancreas,disease,autoimmune disorder of endocrine system,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,5207,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0000569,luna,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP114,HPAP114,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.4452475670636575,platform_constant,5.4452475670636575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973751,,,train,hesrt,samples/GSE296626/GSM8973751,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973752,pancreas,disease,autoimmune disorder of endocrine system;endocrine pancreas disorder,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,6641,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0000569;MONDO:0001933,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP043,HPAP043,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.680787064318546,platform_constant,8.680787064318546,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973752,,,train,hesrt,samples/GSE296626/GSM8973752,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973753,pancreas,disease,autoimmune disorder of endocrine system;endocrine pancreas disorder,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,11180,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0000569;MONDO:0001933,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP148,HPAP148,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,9.52206387738418,platform_constant,9.52206387738418,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973753,,,train,hesrt,samples/GSE296626/GSM8973753,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973754,pancreas,disease,autoimmune disorder of endocrine system;endocrine pancreas disorder,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3728,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0000569;MONDO:0001933,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP107,HPAP107,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.091948223299426,platform_constant,5.091948223299426,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973754,,,train,hesrt,samples/GSE296626/GSM8973754,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973755,pancreas,disease,autoimmune disorder of endocrine system;endocrine pancreas disorder,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,6421,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0000569;MONDO:0001933,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP016,HPAP016,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.909091401018233,platform_constant,6.909091401018233,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973755,,,train,hesrt,samples/GSE296626/GSM8973755,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973756,pancreas,disease,type 1 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1596,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP020,HPAP020,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.273395368896339,platform_constant,3.273395368896339,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973756,,,train,hesrt,samples/GSE296626/GSM8973756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973757,pancreas,disease,type 1 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4726,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP149,HPAP149,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.728237533790973,platform_constant,4.728237533790973,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973757,,,train,hesrt,samples/GSE296626/GSM8973757,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973758,pancreas,disease,type 1 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1296,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP032,HPAP032,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.079416232565573,platform_constant,3.079416232565573,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,40475580;41875135,,GSM8973758,,,train,hesrt,samples/GSE296626/GSM8973758,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973759,pancreas,disease,type 1 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4840,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP071,HPAP071,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.858533656904089,platform_constant,4.858533656904089,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973759,,,train,hesrt,samples/GSE296626/GSM8973759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973760,pancreas,disease,type 1 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4951,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP123,HPAP123,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.36320950623735,platform_constant,8.36320950623735,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973760,,,train,hesrt,samples/GSE296626/GSM8973760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973761,pancreas,disease,type 1 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,5310,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP102,HPAP102,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.810775962600513,platform_constant,5.810775962600513,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973761,,,train,hesrt,samples/GSE296626/GSM8973761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973762,pancreas,disease,type 1 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3440,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP087,HPAP087,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.728237533790974,platform_constant,4.728237533790974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973762,,,train,hesrt,samples/GSE296626/GSM8973762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973763,pancreas,disease,type 1 diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,10742,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP048,HPAP048,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,9.917850870028202,platform_constant,9.917850870028202,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973763,,,train,hesrt,samples/GSE296626/GSM8973763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973764,lymph node,normal,,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1405,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,,luna,Non-Diabetic,Non-Diabetic,luna,not stated,,not stated,,GSE296626:HPAP012,HPAP012,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.138488632903869,platform_constant,5.138488632903869,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973764,,,train,hesrt,samples/GSE296626/GSM8973764,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973765,lymph node,normal,,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,699,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,,luna,Non-Diabetic,Non-Diabetic,luna,not stated,,not stated,,GSE296626:HPAP034,HPAP034,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.863753053567416,platform_constant,2.863753053567416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973765,,,train,hesrt,samples/GSE296626/GSM8973765,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973766,lymph node,normal,,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2632,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,,luna,Non-Diabetic,Non-Diabetic,luna,not stated,,not stated,,GSE296626:HPAP036,HPAP036,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.321206058987416,platform_constant,6.321206058987416,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973766,,,train,hesrt,samples/GSE296626/GSM8973766,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973767,lymph node,normal,,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1532,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,,luna,Non-Diabetic,Non-Diabetic,luna,not stated,,not stated,,GSE296626:HPAP095,HPAP095,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.8708074975117897,platform_constant,2.8708074975117897,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973767,,,train,hesrt,samples/GSE296626/GSM8973767,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973768,lymph node,normal,,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1816,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,,luna,Non-Diabetic,Non-Diabetic,luna,not stated,,not stated,,GSE296626:HPAP110,HPAP110,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.2686401224552117,platform_constant,3.2686401224552117,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,40475580;41875135,,GSM8973768,,,train,hesrt,samples/GSE296626/GSM8973768,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973769,lymph node,disease,autoimmune disorder of endocrine system,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1637,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,MONDO:0000569,mondo_predicate,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP019,HPAP019,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.517508931631093,platform_constant,4.517508931631093,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973769,,,train,hesrt,samples/GSE296626/GSM8973769,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973770,lymph node,disease,autoimmune disorder of endocrine system,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1071,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,MONDO:0000569,mondo_predicate,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP072,HPAP072,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.256766849992147,platform_constant,3.256766849992147,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973770,,,train,hesrt,samples/GSE296626/GSM8973770,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973771,lymph node,normal,,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,883,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,,luna,Non-Diabetic Single Autoantibody Positive,Non-Diabetic Single Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP114,HPAP114,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.4495947264696727,platform_constant,2.4495947264696727,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973771,,,train,hesrt,samples/GSE296626/GSM8973771,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8973772,lymph node,disease,autoimmune disorder of endocrine system,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1977,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,MONDO:0000569,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP043,HPAP043,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.4268617602662115,platform_constant,5.4268617602662115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973772,,,train,hesrt,samples/GSE296626/GSM8973772,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973773,lymph node,disease,autoimmune disorder of endocrine system,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3648,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,MONDO:0000569,luna,Non-Diabetic Multiple Autoantibody Positive,Non-Diabetic Multiple Autoantibody Positive,luna,not stated,,not stated,,GSE296626:HPAP148,HPAP148,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.703517448715571,platform_constant,4.703517448715571,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973773,,,train,hesrt,samples/GSE296626/GSM8973773,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8973774,lymph node,disease,type 1 diabetes mellitus,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2364,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP020,HPAP020,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.256398687335534,platform_constant,3.256398687335534,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973774,,,train,hesrt,samples/GSE296626/GSM8973774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973775,lymph node,disease,type 1 diabetes mellitus,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2128,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP149,HPAP149,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.3765008467669135,platform_constant,3.3765008467669135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973775,,,train,hesrt,samples/GSE296626/GSM8973775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8973776,lymph node,disease,type 1 diabetes mellitus,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,600,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP032,HPAP032,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.249358479650756,platform_constant,2.249358479650756,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973776,,,train,hesrt,samples/GSE296626/GSM8973776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973777,lymph node,disease,type 1 diabetes mellitus,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2475,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP123,HPAP123,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.7762069381402656,platform_constant,3.7762069381402656,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973777,,,train,hesrt,samples/GSE296626/GSM8973777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973778,lymph node,disease,type 1 diabetes mellitus,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1528,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP102,HPAP102,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.2682632010574983,platform_constant,3.2682632010574983,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973778,,,train,hesrt,samples/GSE296626/GSM8973778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8973779,lymph node,disease,type 1 diabetes mellitus,pancreatic lymph node,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2442,Spatial transcriptomics from paired pancreas and associated draining lymph nodes reveals a lymphotoxin-beta signature in human type 1 diabetes,GSE296626,GSE296626,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002527,Pancreatic Lymph Node,MONDO:0005147,luna,type 1 diabetes,Type 1 Diabetes,luna,not stated,,not stated,,GSE296626:HPAP048,HPAP048,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.7773383217065177,platform_constant,3.7773383217065177,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40475580;41875135,,GSM8973779,,,train,hesrt,samples/GSE296626/GSM8973779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8974358,other,disease,melanoma,,cell culture,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3066,Polyamines regulate adaptive antitumor immunity by functional specialization of regulatory T cells [Visium],GSE296660,GSE296660,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,melanoma,MONDO:0005105,luna,,wild-type,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.6555754615051725,platform_constant,4.6555754615051725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40749666,,GSM8974358,,,train,hesrt,samples/GSE296660/GSM8974358,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 0.58, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM8974359,other,disease,melanoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2746,Polyamines regulate adaptive antitumor immunity by functional specialization of regulatory T cells [Visium],GSE296660,GSE296660,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,melanoma,MONDO:0005105,luna,,Foxp3-Cre x CK2b-fl/fl (KO),luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.706450678364957,platform_constant,4.706450678364957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40749666,,GSM8974359,,,train,hesrt,samples/GSE296660/GSM8974359,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 0.85, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM8976790,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4978,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br2720,Br2720,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.3781591269377005,platform_constant,4.3781591269377005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976790,,,train,hesrt,samples/GSE296789/GSM8976790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8976791,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4953,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br2720,Br2720,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,6.152707778717031,platform_constant,6.152707778717031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976791,,,train,hesrt,samples/GSE296789/GSM8976791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8976792,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br2720,Br2720,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.380685657714954,platform_constant,5.380685657714954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976792,,,train,hesrt,samples/GSE296789/GSM8976792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8976793,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4645,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br2743,Br2743,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.890432938325211,platform_constant,4.890432938325211,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976793,,,train,hesrt,samples/GSE296789/GSM8976793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8976794,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4582,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br3942,Br3942,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.908119682696048,platform_constant,4.908119682696048,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976794,,,train,hesrt,samples/GSE296789/GSM8976794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM8976795,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4471,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br6423,Br6423,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.890401070419096,platform_constant,4.890401070419096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976795,,,train,hesrt,samples/GSE296789/GSM8976795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8976796,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4701,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br6432,Br6432,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.378339395715237,platform_constant,4.378339395715237,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976796,,,train,hesrt,samples/GSE296789/GSM8976796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM8976797,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4687,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br6432,Br6432,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,6.152547409958804,platform_constant,6.152547409958804,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976797,,,train,hesrt,samples/GSE296789/GSM8976797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8976798,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4430,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br6432,Br6432,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.380685657714954,platform_constant,5.380685657714954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976798,,,train,hesrt,samples/GSE296789/GSM8976798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8976799,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4586,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br6471,Br6471,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.378339395715237,platform_constant,4.378339395715237,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976799,,,train,hesrt,samples/GSE296789/GSM8976799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8976800,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4502,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br6471,Br6471,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,6.152707778717031,platform_constant,6.152707778717031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976800,,,train,hesrt,samples/GSE296789/GSM8976800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.85, ""life_stage"": 0.99}",,
GSM8976801,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4576,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br6471,Br6471,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.380685657714954,platform_constant,5.380685657714954,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976801,,,train,hesrt,samples/GSE296789/GSM8976801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM8976802,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4974,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br6522,Br6522,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,6.152667685351862,platform_constant,6.152667685351862,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976802,,,train,hesrt,samples/GSE296789/GSM8976802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8976803,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4940,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br6522,Br6522,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.380650595137188,platform_constant,5.380650595137188,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976803,,,train,hesrt,samples/GSE296789/GSM8976803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM8976804,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3528,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br8325,Br8325,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.664590578628688,platform_constant,4.664590578628688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976804,,,train,hesrt,samples/GSE296789/GSM8976804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM8976805,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4151,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br8492,Br8492,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.8904329383252385,platform_constant,4.8904329383252385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976805,,,train,hesrt,samples/GSE296789/GSM8976805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM8976806,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3908,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,GSE296789:Br8667,Br8667,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.681491047670626,platform_constant,4.681491047670626,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42241279,,GSM8976806,,,train,hesrt,samples/GSE296789/GSM8976806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8976807,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: green (heuristic),4249,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.5139635676624215,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,42241279,,GSM8976807,,,train,sda-all,samples/GSE296789/GSM8976807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8976808,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: green (heuristic),4301,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.5115823170404585,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,42241279,,GSM8976808,,,train,sda-all,samples/GSE296789/GSM8976808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM8976809,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: green (heuristic),4313,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.511360375209732,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,42241279,,GSM8976809,,,train,sda-all,samples/GSE296789/GSM8976809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM8976810,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: green (heuristic),4486,Spatio-molecular gene expression reflects dorsal anterior cingulate cortex structure and function in the human brain [spatial transcriptomics],GSE296789,GSE296789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain (dACC),,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.515606348152102,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,42241279,,GSM8976810,,,train,sda-all,samples/GSE296789/GSM8976810,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM8977110,spinal cord,disease,demyelinating disease of central nervous system,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,793,CD38+CD93+ microglia and macrophages drive neuroinflammation through glycolysis-histone lactylation axis in multiple sclerosis model mice,GSE296797,GSE296797,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0020800,mondo_predicate,normal,Naive D0,age rule: age with unit,not stated,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.050894432955722,platform_constant,4.050894432955722,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM8977110,,,train,hesrt,samples/GSE296797/GSM8977110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9034878,spinal cord,disease,multiple sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,969,CD38+CD93+ microglia and macrophages drive neuroinflammation through glycolysis-histone lactylation axis in multiple sclerosis model mice,GSE296797,GSE296797,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0005301,luna,experimental autoimmune encephalomyelitis,EAE D13,age rule: age with unit,not stated,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.03808412436472,platform_constant,4.03808412436472,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9034878,,,train,hesrt,samples/GSE296797/GSM9034878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9034879,spinal cord,disease,multiple sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1196,CD38+CD93+ microglia and macrophages drive neuroinflammation through glycolysis-histone lactylation axis in multiple sclerosis model mice,GSE296797,GSE296797,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0005301,luna,experimental autoimmune encephalomyelitis,EAE D18,age rule: age with unit,not stated,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.058215887380552,platform_constant,4.058215887380552,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9034879,,,train,hesrt,samples/GSE296797/GSM9034879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9034880,spinal cord,disease,multiple sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1043,CD38+CD93+ microglia and macrophages drive neuroinflammation through glycolysis-histone lactylation axis in multiple sclerosis model mice,GSE296797,GSE296797,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0005301,luna,experimental autoimmune encephalomyelitis,EAE D25,age rule: age with unit,not stated,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.056058553898246,platform_constant,4.056058553898246,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9034880,,,train,hesrt,samples/GSE296797/GSM9034880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9034881,spinal cord,disease,multiple sclerosis,spinal cord,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,891,CD38+CD93+ microglia and macrophages drive neuroinflammation through glycolysis-histone lactylation axis in multiple sclerosis model mice,GSE296797,GSE296797,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,spinal cord,MONDO:0005301,luna,experimental autoimmune encephalomyelitis,EAE D35,age rule: age with unit,not stated,8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.050469565286298,platform_constant,4.050469565286298,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9034881,,,train,hesrt,samples/GSE296797/GSM9034881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8978581,other,normal,,prostatic urethra,primary tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,905209,A cellular anatomy of normal adult human female urethra [Xenium],GSE296852,GSE296852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001335,prostatic urethra,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8978581,,,train,sda-all,samples/GSE296852/GSM8978581,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.97}",organ,low_confidence_annotation
GSM8978582,prostate,normal,,prostatic urethra,primary tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,792876,A cellular anatomy of normal adult human female urethra [Xenium],GSE296852,GSE296852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001335,prostatic urethra,,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999891190807799,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8978582,,,train,sda-all,samples/GSE296852/GSM8978582,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8978583,other,normal,,female urethra,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,364870,A cellular anatomy of normal adult human female urethra [Xenium],GSE296852,GSE296852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001334,female urethra,,luna,,,luna,not stated,,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000092592592592,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8978583,,,train,sda-all,samples/GSE296852/GSM8978583,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8978584,other,normal,,female urethra,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,870474,A cellular anatomy of normal adult human female urethra [Xenium],GSE296852,GSE296852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001334,female urethra,,luna,,,luna,not stated,,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999945540887897,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM8978584,,,train,sda-all,samples/GSE296852/GSM8978584,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8979564,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S3000,False,,180902,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54752,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979564,,,test,sda-all,samples/GSE296896/GSM8979564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.36, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979565,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,juvenile,unknown,BMK S1000,BMKMANU S3000,False,,180167,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,juvenile,4 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54752,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979565,,,test,sda-all,samples/GSE296896/GSM8979565,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 0.30000000000000004, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979566,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,juvenile,unknown,BMK S1000,BMKMANU S3000,False,,147797,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,juvenile,4 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54752,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979566,,,test,sda-all,samples/GSE296896/GSM8979566,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979567,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S3000,False,,157637,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54838,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979567,,,test,sda-all,samples/GSE296896/GSM8979567,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979568,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S3000,False,,140083,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine (distal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54838,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979568,,,test,sda-all,samples/GSE296896/GSM8979568,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM8979569,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S3000,False,,152916,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54838,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979569,,,test,sda-all,samples/GSE296896/GSM8979569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.6000000000000001, ""life_stage"": 0.98}",,
GSM8979570,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S3000,False,,148063,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54838,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979570,,,test,sda-all,samples/GSE296896/GSM8979570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.41000000000000003, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979571,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S3000,False,,147205,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54838,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM8979571,,,test,sda-all,samples/GSE296896/GSM8979571,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.45, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9213570,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S3000,False,,64985,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Dox at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54752,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM9213570,,,test,sda-all,samples/GSE296896/GSM9213570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9463728,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S3000,False,,67970,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Dox at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54752,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM9463728,,,test,sda-all,samples/GSE296896/GSM9463728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9463729,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S3000,False,,72884,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Dox at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54752,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM9463729,,,test,sda-all,samples/GSE296896/GSM9463729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9463730,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S3000,False,,70155,High-resolution spatial transcriptomics of mouse intestine [Spatial-RNAseq],GSE296896,GSE296896,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Dox at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,BMKMANU S3000,,,cell,54752,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42373956,,GSM9463730,,,test,sda-all,samples/GSE296896/GSM9463730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8979572,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,180902,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,3866,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979572,,,train,sda-all,samples/GSE296897/GSM8979572,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.34, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979573,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,180902,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,8804,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979573,,,train,sda-all,samples/GSE296897/GSM8979573,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979574,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,180902,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,11995,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979574,,,train,sda-all,samples/GSE296897/GSM8979574,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979575,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,juvenile,unknown,BMK S1000,BMKMANU S1000/S3000,False,,180167,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,juvenile,4 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,4879,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979575,,,train,sda-all,samples/GSE296897/GSM8979575,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.2, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979576,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,juvenile,unknown,BMK S1000,BMKMANU S1000/S3000,False,,180167,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,juvenile,4 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,11950,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979576,,,train,sda-all,samples/GSE296897/GSM8979576,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979577,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,juvenile,unknown,BMK S1000,BMKMANU S1000/S3000,False,,180167,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,juvenile,4 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,14518,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979577,,,train,sda-all,samples/GSE296897/GSM8979577,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.27, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979578,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,juvenile,unknown,BMK S1000,BMKMANU S1000/S3000,False,,147797,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,juvenile,4 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,5938,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979578,,,train,sda-all,samples/GSE296897/GSM8979578,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.9500000000000001, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979579,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,juvenile,unknown,BMK S1000,BMKMANU S1000/S3000,False,,147797,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,juvenile,4 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,9075,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979579,,,train,sda-all,samples/GSE296897/GSM8979579,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979580,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,juvenile,unknown,BMK S1000,BMKMANU S1000/S3000,False,,147797,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,juvenile,4 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,2996,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979580,,,train,sda-all,samples/GSE296897/GSM8979580,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.23, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979581,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,157637,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,3277,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979581,,,train,sda-all,samples/GSE296897/GSM8979581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.28, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979582,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,157637,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,9521,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979582,,,train,sda-all,samples/GSE296897/GSM8979582,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.26, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979583,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,157637,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (proximal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,5623,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979583,,,train,sda-all,samples/GSE296897/GSM8979583,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.33, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM8979584,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,140083,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (distal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,2620,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979584,,,train,sda-all,samples/GSE296897/GSM8979584,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 0.91, ""disease_status"": 0.8300000000000001, ""uberon"": 0.5, ""life_stage"": 0.98}",organ;uberon,low_confidence_annotation
GSM8979585,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,140083,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (distal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,8075,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979585,,,train,sda-all,samples/GSE296897/GSM8979585,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979586,colon,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,140083,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (distal),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,6563,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979586,,,train,sda-all,samples/GSE296897/GSM8979586,sda-tissue-disease-2.3,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.5, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM8979587,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,152916,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,3185,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979587,,,train,sda-all,samples/GSE296897/GSM8979587,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM8979588,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,152916,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,9178,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979588,,,train,sda-all,samples/GSE296897/GSM8979588,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM8979589,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,152916,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,7075,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979589,,,train,sda-all,samples/GSE296897/GSM8979589,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.63, ""life_stage"": 0.99}",,
GSM8979590,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,148063,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,3199,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979590,,,train,sda-all,samples/GSE296897/GSM8979590,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM8979591,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,148063,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,8941,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979591,,,train,sda-all,samples/GSE296897/GSM8979591,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979592,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,148063,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,6734,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979592,,,train,sda-all,samples/GSE296897/GSM8979592,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.72, ""life_stage"": 0.97}",,
GSM8979593,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,147205,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,3499,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979593,,,train,sda-all,samples/GSE296897/GSM8979593,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.5, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM8979594,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,147205,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,9503,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979594,,,train,sda-all,samples/GSE296897/GSM8979594,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.6900000000000001, ""life_stage"": 0.99}",,
GSM8979595,small intestine,perturbation,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,147205,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000160,Intestine (middle),,luna,,Dox induction for 1 week,age rule: age with unit,adult,8 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,7204,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM8979595,,,train,sda-all,samples/GSE296897/GSM8979595,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM9206540,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,64985,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,2489,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9206540,,,train,sda-all,samples/GSE296897/GSM9206540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM9206541,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,64985,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,12458,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9206541,,,train,sda-all,samples/GSE296897/GSM9206541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM9206542,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,64985,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,13692,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9206542,,,train,sda-all,samples/GSE296897/GSM9206542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 0.76}",disease_status,low_confidence_annotation
GSM9463749,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,67970,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,1164,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463749,,,train,sda-all,samples/GSE296897/GSM9463749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM9463750,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,67970,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,6969,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463750,,,train,sda-all,samples/GSE296897/GSM9463750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM9463751,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,67970,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,5454,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463751,,,train,sda-all,samples/GSE296897/GSM9463751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.98, ""life_stage"": 0.52}",disease_status;life_stage,low_confidence_annotation
GSM9463752,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,72884,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,1479,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463752,,,train,sda-all,samples/GSE296897/GSM9463752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM9463753,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,72884,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,8003,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463753,,,train,sda-all,samples/GSE296897/GSM9463753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9463754,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,72884,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,6266,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463754,,,train,sda-all,samples/GSE296897/GSM9463754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9463755,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,70155,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,1398,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463755,,,train,sda-all,samples/GSE296897/GSM9463755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9463756,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,70155,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,7797,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463756,,,train,sda-all,samples/GSE296897/GSM9463756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM9463757,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,BMK S1000,BMKMANU S1000/S3000,False,,70155,High-resolution spatial transcriptomics of DARLIN mouse [CRISPR array amplicon],GSE296897,GSE296897,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,Dox induction for 12h at E10,age rule: age with unit,juvenile,7 weeks,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,cell,6285,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,42373956,,GSM9463757,,,train,sda-all,samples/GSE296897/GSM9463757,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.6900000000000001}",,
GSM8980980,placenta,normal,,placenta,primary tissue,Sus scrofa,pig,fetal,unknown,Visium,Visium,True,H&E,3740,Defining Cellular Diversity at the Swine Maternal-Fetal Interface Using Spatial Transcriptomics and Organoids [MFI017_Visium],GSE296975,GSE296975,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001987,swine placenta,,luna,,,luna,fetal,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22040,counts,pixel,4.300049862810358,platform_constant,4.300049862810358,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40875599,,GSM8980980,,,train,hesrt,samples/GSE296975/GSM8980980,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.93, ""life_stage"": 0.66}",,
GSM8980981,placenta,normal,,placenta,primary tissue,Sus scrofa,pig,fetal,unknown,Visium,Visium,True,H&E,3003,Defining Cellular Diversity at the Swine Maternal-Fetal Interface Using Spatial Transcriptomics and Organoids [MFI017_Visium],GSE296975,GSE296975,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001987,swine placenta,,luna,,,luna,fetal,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22040,counts,pixel,4.144414607920543,platform_constant,4.144414607920543,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40875599,,GSM8980981,,,train,hesrt,samples/GSE296975/GSM8980981,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.96, ""life_stage"": 0.74}",,
GSM8980982,placenta,normal,,placenta,primary tissue,Sus scrofa,pig,fetal,unknown,Visium,Visium,True,H&E,3234,Defining Cellular Diversity at the Swine Maternal-Fetal Interface Using Spatial Transcriptomics and Organoids [MFI017_Visium],GSE296975,GSE296975,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001987,swine placenta,,luna,,,luna,fetal,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22040,counts,pixel,4.30224987236243,platform_constant,4.30224987236243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40875599,,GSM8980982,,,train,hesrt,samples/GSE296975/GSM8980982,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.9500000000000001, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM8980983,placenta,normal,,placenta,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E,3679,Defining Cellular Diversity at the Swine Maternal-Fetal Interface Using Spatial Transcriptomics and Organoids [MFI017_Visium],GSE296975,GSE296975,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0001987,swine placenta,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,22040,counts,pixel,4.303899673298318,platform_constant,4.303899673298318,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40875599,,GSM8980983,,,train,hesrt,samples/GSE296975/GSM8980983,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.9400000000000001, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM8981121,other,normal,,female urethra,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,246172,Single cell map of the adult female mouse urethra reveals epithelial and stromal macrophages with distinct functional identities,GSE296982,GSE296982,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001334,urethra,,luna,,,luna,not stated,,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000027250926531,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40907791,,GSM8981121,,,train,sda-all,samples/GSE296982/GSM8981121,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9232561,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium HD,Visium HD,True,H&E,360769,Hereditary Chronic Pancreatitis Induced Plasticity Cooperates with Mutant Kras in Early Pancreatic Carcinogenesis,GSE297058,GSE297058,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,manual,,Cre,age rule: age with unit,juvenile,7.9 wk,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,VisiumHD,,,bin,19059,counts,um,1.0,verified,3.385477894863119,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41419303,,GSM9232561,,,train,sda-all,samples/GSE297058/GSM9232561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9232562,pancreas,disease,hereditary chronic pancreatitis,pancreas,primary tissue,Mus musculus,house mouse,adult,male,Visium HD,Visium HD,True,H&E,216977,Hereditary Chronic Pancreatitis Induced Plasticity Cooperates with Mutant Kras in Early Pancreatic Carcinogenesis,GSE297058,GSE297058,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0008185,luna,,Cpa1,age rule: age with unit,adult,8.6 wk,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,VisiumHD,,,bin,19059,counts,um,1.0,verified,2.699535643921179,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41419303,,GSM9232562,,,train,sda-all,samples/GSE297058/GSM9232562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM8983043,skin,not stated,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2581,Targeting circulating mechanoresponsive monocytes and macrophages to reduce fibrosis,GSE297064,GSE297064,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Human tissue section,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.8044403070123325,platform_constant,4.8044403070123325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41120571,,GSM8983043,,,train,hesrt,samples/GSE297064/GSM8983043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.46, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM8983044,skin,disease,,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,943,Targeting circulating mechanoresponsive monocytes and macrophages to reduce fibrosis,GSE297064,GSE297064,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Human tissue section,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.806488282377554,platform_constant,4.806488282377554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41120571,,GSM8983044,,,train,hesrt,samples/GSE297064/GSM8983044,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.72, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9577754,head and neck,normal,,olfactory segment of nasal mucosa,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERSCOPE,False,,109622,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,GSE297068,GSE297068,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uberon_chain,UBERON:0005386,whole olfactory mucosa,,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42054991,,GSM9577754,,,train,sda-all,samples/GSE297068/GSM9577754,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9577755,head and neck,normal,,olfactory segment of nasal mucosa,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERSCOPE,False,,109611,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,GSE297068,GSE297068,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uberon_chain,UBERON:0005386,whole olfactory mucosa,,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42054991,,GSM9577755,,,train,sda-all,samples/GSE297068/GSM9577755,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9577756,head and neck,normal,,olfactory segment of nasal mucosa,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERSCOPE,False,,96152,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,GSE297068,GSE297068,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uberon_chain,UBERON:0005386,whole olfactory mucosa,,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42054991,,GSM9577756,,,train,sda-all,samples/GSE297068/GSM9577756,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9577757,head and neck,normal,,olfactory segment of nasal mucosa,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERSCOPE,False,,112139,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,GSE297068,GSE297068,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uberon_chain,UBERON:0005386,whole olfactory mucosa,,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42054991,,GSM9577757,,,train,sda-all,samples/GSE297068/GSM9577757,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9579157,head and neck,normal,,olfactory segment of nasal mucosa,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,77023,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,GSE297068,GSE297068,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0005386,whole olfactory mucosa,,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,45100,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42054991,,GSM9579157,,,train,sda-all,samples/GSE297068/GSM9579157,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9579158,head and neck,normal,,olfactory segment of nasal mucosa,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,98274,A spatial code governs olfactory receptor choice and aligns sensory maps in the nose and brain,GSE297068,GSE297068,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0005386,whole olfactory mucosa,,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,39848,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42054991,,GSM9579158,,,train,sda-all,samples/GSE297068/GSM9579158,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM8983431,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4525,Inhibition of ACLY enhances tumor immunogenicity and resolves MASH-driven HCC,GSE297081,GSE297081,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027;MONDO:0007256,mondo_predicate (Luna: perturbation),hepatocellular carcinoma,EVT0185 treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.692055456682389,platform_constant,4.692055456682389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40739358,,GSM8983431,,,test,hesrt,samples/GSE297081/GSM8983431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8983432,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4992,Inhibition of ACLY enhances tumor immunogenicity and resolves MASH-driven HCC,GSE297081,GSE297081,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,hepatocellular carcinoma,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.4659910288777915,platform_constant,4.4659910288777915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40739358,,GSM8983432,,,test,hesrt,samples/GSE297081/GSM8983432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8983433,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4699,Inhibition of ACLY enhances tumor immunogenicity and resolves MASH-driven HCC,GSE297081,GSE297081,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,hepatocellular carcinoma,"wild type, non treatment",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.714599598587771,platform_constant,4.714599598587771,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40739358,,GSM8983433,,,test,hesrt,samples/GSE297081/GSM8983433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,normal_but_disease_text
GSM8983434,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4970,Inhibition of ACLY enhances tumor immunogenicity and resolves MASH-driven HCC,GSE297081,GSE297081,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,mondo_predicate (Luna: perturbation),hepatocellular carcinoma,"Acly knockout, non treatment",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.401377172552009,platform_constant,5.401377172552009,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40739358,,GSM8983434,,,test,hesrt,samples/GSE297081/GSM8983434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8984115,bone,disease,bone fracture,periosteum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,10146,Integrating spatial and single-cell transcriptomics to characterize mouse long bone fracture healing process,GSE297119,GSE297119,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002515,periosteum,MONDO:0005315,mondo_predicate (Luna: perturbation),,d0,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19059,counts,pixel,4.2150664964213185,platform_constant,4.2150664964213185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40483363,,GSM8984115,,,train,hesrt,samples/GSE297119/GSM8984115,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984116,bone,disease,bone fracture,periosteum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,6812,Integrating spatial and single-cell transcriptomics to characterize mouse long bone fracture healing process,GSE297119,GSE297119,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002515,periosteum,MONDO:0005315,mondo_predicate (Luna: perturbation),,d5,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,8.094048852977227,platform_constant,8.094048852977227,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40483363,,GSM8984116,,,train,hesrt,samples/GSE297119/GSM8984116,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984117,bone,disease,bone fracture,periosteum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,7260,Integrating spatial and single-cell transcriptomics to characterize mouse long bone fracture healing process,GSE297119,GSE297119,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002515,periosteum,MONDO:0005315,mondo_predicate (Luna: perturbation),,d15,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,9.068572631055238,platform_constant,9.068572631055238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40483363,,GSM8984117,,,train,hesrt,samples/GSE297119/GSM8984117,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984652,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: magenta (heuristic),3432,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,GSE297144,GSE297144,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic,MONDO:0009831,luna,,HFE WT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.152719153733554,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984652,,,train,sda-all,samples/GSE297144/GSM8984652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984653,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3629,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,GSE297144,GSE297144,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic,MONDO:0009831,luna,,HFE WT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.308880973491598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984653,,,train,sda-all,samples/GSE297144/GSM8984653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984654,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2043,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,GSE297144,GSE297144,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic,MONDO:0009831,mondo_predicate (Luna: perturbation),,HFE H63D,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.188760169496387,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984654,,,train,sda-all,samples/GSE297144/GSM8984654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984655,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: magenta (heuristic),2868,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,GSE297144,GSE297144,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic,MONDO:0009831,mondo_predicate (Luna: perturbation),,HFE H63D,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.186354631700367,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984655,,,train,sda-all,samples/GSE297144/GSM8984655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984656,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: magenta (heuristic),4570,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,GSE297144,GSE297144,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic,MONDO:0009831,luna,,HFE H63D,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,5.129799177869982,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984656,,,train,sda-all,samples/GSE297144/GSM8984656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984657,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3697,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,GSE297144,GSE297144,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic,MONDO:0009831,luna,,HFE WT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.156294407208097,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984657,,,train,sda-all,samples/GSE297144/GSM8984657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984658,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: magenta (heuristic),3659,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,GSE297144,GSE297144,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic,MONDO:0009831,mondo_predicate (Luna: perturbation),,HFE H63D,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.179522969708007,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984658,,,train,sda-all,samples/GSE297144/GSM8984658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8984659,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2713,The HFE H63D variant in pancreatic cancer promotes epithelial-to-mesenchymal transition at the expense of cell cycle,GSE297144,GSE297144,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic,MONDO:0009831,luna,,HFE WT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.539159235434246,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8984659,,,train,sda-all,samples/GSE297144/GSM8984659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8989875,skeletal muscle,disease,Duchenne muscular dystrophy,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1969,Spatial transcriptomics and scRNA-sequencing on gastrocnemius muscle form B6-mdx and D2-mdx mice,GSE297388,GSE297388,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001134,Skeletal Muscle,MONDO:0010679,luna,,C57BL/6J-mdx,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.137178963649799,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42067923,,GSM8989875,,,train,sda-all,samples/GSE297388/GSM8989875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8989876,skeletal muscle,disease,Duchenne muscular dystrophy,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),1455,Spatial transcriptomics and scRNA-sequencing on gastrocnemius muscle form B6-mdx and D2-mdx mice,GSE297388,GSE297388,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001134,Skeletal Muscle,MONDO:0010679,luna,,D2.B10-mdx,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,5.140356582873277,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42067923,,GSM8989876,,,train,sda-all,samples/GSE297388/GSM8989876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8989877,skeletal muscle,disease,Duchenne muscular dystrophy,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2511,Spatial transcriptomics and scRNA-sequencing on gastrocnemius muscle form B6-mdx and D2-mdx mice,GSE297388,GSE297388,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001134,Skeletal Muscle,MONDO:0010679,luna,,C57BL/6J-mdx,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.511266052437389,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42067923,,GSM8989877,,,train,sda-all,samples/GSE297388/GSM8989877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8989878,skeletal muscle,disease,Duchenne muscular dystrophy,skeletal muscle tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1574,Spatial transcriptomics and scRNA-sequencing on gastrocnemius muscle form B6-mdx and D2-mdx mice,GSE297388,GSE297388,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001134,Skeletal Muscle,MONDO:0010679,luna,,D2.B10-mdx,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.506525192801236,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42067923,,GSM8989878,,,train,sda-all,samples/GSE297388/GSM8989878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM8992213,bladder,not stated,,urinary bladder,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,528538,Human bladder cell spatial mapping,GSE297459,GSE297459,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder,,luna,,,age rule: age in years,adult,42 years,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000059999127285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8992213,,,val,sda-all,samples/GSE297459/GSM8992213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8995843,lung,disease,infectious disease,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3170,Spatial transcriptomics of Atg7 knockout mice reveals ATG7’s role in antimicrobial immunity against nontuberculous mycobacteria,GSE297621,GSE297621,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005550,luna,,"Atg7 WT (Atg7fl/fl LysM-Cre-/-), NTM infection",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.5659895938467185,platform_constant,4.5659895938467185,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40730835,,GSM8995843,,,train,hesrt,samples/GSE297621/GSM8995843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM8995844,lung,disease,infectious disease,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3801,Spatial transcriptomics of Atg7 knockout mice reveals ATG7’s role in antimicrobial immunity against nontuberculous mycobacteria,GSE297621,GSE297621,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005550,luna,,"Atg7 cKO (Atg7fl/fl LysM-Cre+/+), NTM infection",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.351522940037312,platform_constant,5.351522940037312,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40730835,,GSM8995844,,,train,hesrt,samples/GSE297621/GSM8995844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM8996339,brain,disease,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Other,Nova-ST,False,,57800,Nova-ST spatial transcriptomics of Lecanamab- and Lecanemab LALA-PG-treated xenotrasplanted human microglia [ST],GSE297667,GSE297667,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Brain,,luna,,Lecanemab,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,other,,,bin,51348,unknown,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,41286448,,GSM8996339,,,train,sda-all,samples/GSE297667/GSM8996339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.87, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8996340,brain,disease,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Other,Nova-ST,False,,57800,Nova-ST spatial transcriptomics of Lecanamab- and Lecanemab LALA-PG-treated xenotrasplanted human microglia [ST],GSE297667,GSE297667,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Brain,,luna,,Lecanemab,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,other,,,bin,52120,unknown,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,41286448,,GSM8996340,,,train,sda-all,samples/GSE297667/GSM8996340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8996341,brain,disease,,brain,xenograft,Homo sapiens,human,not stated,unknown,Other,Nova-ST,False,,57800,Nova-ST spatial transcriptomics of Lecanamab- and Lecanemab LALA-PG-treated xenotrasplanted human microglia [ST],GSE297667,GSE297667,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Brain,,luna,,Lecanemab LALA-PG,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,other,,,bin,51589,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41286448,,GSM8996341,,,train,sda-all,samples/GSE297667/GSM8996341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM8996342,brain,disease,,brain,xenograft,Homo sapiens,human,not stated,unknown,Other,Nova-ST,False,,57800,Nova-ST spatial transcriptomics of Lecanamab- and Lecanemab LALA-PG-treated xenotrasplanted human microglia [ST],GSE297667,GSE297667,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Brain,,luna,,Lecanemab LALA-PG,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,other,,,bin,52343,unknown,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,41286448,,GSM8996342,,,train,sda-all,samples/GSE297667/GSM8996342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.39, ""disease_status"": 0.71, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM8998316,heart,disease,myocarditis,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2503,IL-17A Neutralization Prevents Immune Checkpoint Inhibitor-Associated Myocarditis and Synergistically Enhances Immune Checkpoint Blockade Therapy,GSE297745,GSE297745,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0004496,luna,,anti-PD-1 + anti-CTLA-4,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.9747681605734515,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8998316,,,train,sda-all,samples/GSE297745/GSM8998316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8998317,heart,disease,myocarditis,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3052,IL-17A Neutralization Prevents Immune Checkpoint Inhibitor-Associated Myocarditis and Synergistically Enhances Immune Checkpoint Blockade Therapy,GSE297745,GSE297745,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0004496,luna,,anti-PD-1 + anti-CTLA-4,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.912943084682962,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8998317,,,train,sda-all,samples/GSE297745/GSM8998317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8998318,heart,disease,myocarditis,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2604,IL-17A Neutralization Prevents Immune Checkpoint Inhibitor-Associated Myocarditis and Synergistically Enhances Immune Checkpoint Blockade Therapy,GSE297745,GSE297745,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0004496,luna,,anti-PD-1 + anti-CTLA-4 + IL-17A neutralizing antbody,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.97278777450552,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8998318,,,train,sda-all,samples/GSE297745/GSM8998318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM8998319,heart,disease,myocarditis,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2585,IL-17A Neutralization Prevents Immune Checkpoint Inhibitor-Associated Myocarditis and Synergistically Enhances Immune Checkpoint Blockade Therapy,GSE297745,GSE297745,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0004496,mondo_predicate (Luna: perturbation),,anti-PD-1 + anti-CTLA-4 + IL-17A neutralizing antbody,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.908094803096151,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM8998319,,,train,sda-all,samples/GSE297745/GSM8998319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9002269,lung,normal,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,21245,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002269,,,train,sda-all,samples/GSE297945/GSM9002269,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.51}",disease_status;life_stage,low_confidence_annotation
GSM9002270,lung,normal,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,96397,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002270,,,train,sda-all,samples/GSE297945/GSM9002270,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9002271,lung,disease,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Xenium,Xenium,False,,118634,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002271,,,train,sda-all,samples/GSE297945/GSM9002271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9002272,lung,disease,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,19020,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002272,,,train,sda-all,samples/GSE297945/GSM9002272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM9002273,lung,normal,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,19655,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,0.5000171303275318,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002273,,,train,sda-all,samples/GSE297945/GSM9002273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9002274,lung,disease,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,13900,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,0.49994212962962964,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002274,,,train,sda-all,samples/GSE297945/GSM9002274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 0.6900000000000001}",,
GSM9002275,lung,disease,pulmonary hypoplasia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,45376,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0800133,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002275,,,train,sda-all,samples/GSE297945/GSM9002275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9002276,lung,disease,bronchopulmonary dysplasia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,15367,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0019091,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002276,,,train,sda-all,samples/GSE297945/GSM9002276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9002277,lung,disease,congenital heart disease,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,24418,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0005453,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,0.5000308641975308,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002277,,,train,sda-all,samples/GSE297945/GSM9002277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9002278,lung,disease,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,22157,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002278,,,train,sda-all,samples/GSE297945/GSM9002278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 0.89}",,
GSM9002279,lung,disease,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,41366,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002279,,,train,sda-all,samples/GSE297945/GSM9002279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9002280,lung,disease,perinatal asphyxia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,47236,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0006663,mondo_predicate,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002280,,,train,sda-all,samples/GSE297945/GSM9002280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9002281,lung,disease,bronchopulmonary dysplasia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,19686,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0019091,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002281,,,train,sda-all,samples/GSE297945/GSM9002281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM9002282,lung,disease,pulmonary hypoplasia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,49136,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0800133,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,0.5000017146776405,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002282,,,train,sda-all,samples/GSE297945/GSM9002282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.84}",,
GSM9002283,lung,disease,perinatal asphyxia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,11068,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0006663,mondo_predicate,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002283,,,train,sda-all,samples/GSE297945/GSM9002283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM9002284,lung,normal,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,41621,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002284,,,train,sda-all,samples/GSE297945/GSM9002284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9002285,lung,disease,bronchopulmonary dysplasia,lung,primary tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,7861,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0019091,luna,,,luna,adult,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,0.5000257484207635,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002285,,,train,sda-all,samples/GSE297945/GSM9002285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9002286,lung,normal,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,22856,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002286,,,train,sda-all,samples/GSE297945/GSM9002286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.44}",disease_status;life_stage,low_confidence_annotation
GSM9002287,lung,normal,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,49826,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002287,,,train,sda-all,samples/GSE297945/GSM9002287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9002288,lung,disease,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Xenium,Xenium,False,,122416,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,fetal,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002288,,,train,sda-all,samples/GSE297945/GSM9002288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.98, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM9002289,lung,disease,necrotizing enterocolitis,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,18124,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0005313,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002289,,,train,sda-all,samples/GSE297945/GSM9002289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9002290,lung,normal,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,33551,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,0.5000082665123584,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002290,,,train,sda-all,samples/GSE297945/GSM9002290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM9002291,lung,disease,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,20220,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002291,,,train,sda-all,samples/GSE297945/GSM9002291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM9002292,lung,disease,pulmonary hypoplasia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,44277,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0800133,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002292,,,train,sda-all,samples/GSE297945/GSM9002292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9002293,lung,disease,bronchopulmonary dysplasia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,17761,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0019091,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002293,,,train,sda-all,samples/GSE297945/GSM9002293,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.9500000000000001}",,
GSM9002294,lung,disease,congenital heart disease,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,14657,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0005453,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,0.4999917776681466,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002294,,,train,sda-all,samples/GSE297945/GSM9002294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9002295,lung,disease,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,31853,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002295,,,train,sda-all,samples/GSE297945/GSM9002295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 0.97, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9002296,lung,disease,meningitis,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,36362,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0021108,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002296,,,train,sda-all,samples/GSE297945/GSM9002296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9002297,lung,disease,perinatal asphyxia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,34131,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0006663,mondo_predicate,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002297,,,train,sda-all,samples/GSE297945/GSM9002297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9002298,lung,disease,bronchopulmonary dysplasia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,14938,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0019091,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002298,,,train,sda-all,samples/GSE297945/GSM9002298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9002299,lung,disease,pulmonary hypoplasia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,40064,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0800133,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,0.5000143867148964,VERIFIED,UNRESOLVED,VERIFIED,,,VERIFIED,PASS,,,40502191,,GSM9002299,,,train,sda-all,samples/GSE297945/GSM9002299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9002300,lung,disease,perinatal asphyxia,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,8432,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0006663,mondo_predicate,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002300,,,train,sda-all,samples/GSE297945/GSM9002300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9002301,lung,normal,,lung,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,False,,41113,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002301,,,train,sda-all,samples/GSE297945/GSM9002301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9002302,lung,disease,bronchopulmonary dysplasia,lung,primary tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,False,,5604,A spatial transcriptomic atlas of acute neonatal lung injury across development and disease severity,GSE297945,GSE297945,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0019091,luna,,,luna,adult,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,343,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40502191,,GSM9002302,,,train,sda-all,samples/GSE297945/GSM9002302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9002336,skin,normal,,skin of external ear,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2444,IL-33/IL1RL1 (ST2) signalling drives immune suppression in HPV-mediated epithelial hyperplasia,GSE297947,GSE297947,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001459,ear skin,,luna,,C57BL/6J,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,31053,counts,um,1.0,verified,4.168619593163731,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42679897,,GSM9002336,,,train,sda-all,samples/GSE297947/GSM9002336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.2, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9004713,plant,normal,,,primary tissue,Triticum aestivum,bread wheat,not stated,unknown,Stereo-seq,Stereo-seq,False,,151711,Spatial Transcriptomics of Developing Wheat Seed Reveals Concentric Gene Expression Zones and Subgenome Biased Expression of Key Genes,GSE298021,GSE298021,4565,Triticum aestivum,4565,,False,False,GEO organism field,Triticum aestivum,,luna,,seed,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,STOmics,,,bin,70766,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,40904198;42192524,,GSM9004713,,,train,sda-all,samples/GSE298021/GSM9004713,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.92}",,
GSM9004714,plant,normal,,,primary tissue,Triticum aestivum,bread wheat,not stated,unknown,Stereo-seq,Stereo-seq,False,,156493,Spatial Transcriptomics of Developing Wheat Seed Reveals Concentric Gene Expression Zones and Subgenome Biased Expression of Key Genes,GSE298021,GSE298021,4565,Triticum aestivum,4565,,False,False,GEO organism field,Triticum aestivum,,luna,,seed,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,STOmics,,,bin,63481,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,40904198;42192524,,GSM9004714,,,train,sda-all,samples/GSE298021/GSM9004714,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.84}",,
GSM9004715,plant,normal,,,primary tissue,Triticum aestivum,bread wheat,not stated,unknown,Stereo-seq,Stereo-seq,False,,136491,Spatial Transcriptomics of Developing Wheat Seed Reveals Concentric Gene Expression Zones and Subgenome Biased Expression of Key Genes,GSE298021,GSE298021,4565,Triticum aestivum,4565,,False,False,GEO organism field,Triticum aestivum,,luna,,seed,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,STOmics,,,bin,62432,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,40904198;42192524,,GSM9004715,,,train,sda-all,samples/GSE298021/GSM9004715,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.85}",,
GSM9008654,other,normal,,parathyroid gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1544,Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2,GSE298115,GSE298115,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001132,Parathyroid,,luna,,WT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41025096,,GSM9008654,,,test,sda-all,samples/GSE298115/GSM9008654,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9008655,other,normal,,parathyroid gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,737,Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2,GSE298115,GSE298115,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001132,Parathyroid,,luna,,WT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41025096,,GSM9008655,,,test,sda-all,samples/GSE298115/GSM9008655,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9008656,other,perturbation,,parathyroid gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1531,Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2,GSE298115,GSE298115,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001132,Parathyroid,,luna,,Gcm2 variant p.Y392S,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41025096,,GSM9008656,,,test,sda-all,samples/GSE298115/GSM9008656,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9008657,other,perturbation,,parathyroid gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1466,Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2,GSE298115,GSE298115,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001132,Parathyroid,,luna,,Gcm2 variant p.Y392S,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41025096,,GSM9008657,,,test,sda-all,samples/GSE298115/GSM9008657,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9011362,bone,disease,breast neoplasm;metastatic neoplasm,bone element,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3186,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Bone metastatic breast tumor,MONDO:0021100;MONDO:0024883,luna,metastatic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.685212622397548,platform_constant,4.685212622397548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011362,,,train,hesrt,samples/GSE298286/GSM9011362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011363,bone,disease,breast neoplasm;metastatic neoplasm,bone element,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1567,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Bone metastatic breast tumor,MONDO:0021100;MONDO:0024883,luna,metastatic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.308179487351373,platform_constant,7.308179487351373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011363,,,train,hesrt,samples/GSE298286/GSM9011363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011364,bone,disease,breast neoplasm;metastatic neoplasm,bone element,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1703,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Bone metastatic breast tumor,MONDO:0021100;MONDO:0024883,luna,metastatic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.390778009073881,platform_constant,4.390778009073881,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011364,,,train,hesrt,samples/GSE298286/GSM9011364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011365,bone,disease,breast neoplasm;metastatic neoplasm,bone tissue,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4027,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002481,Bone metastatic breast tumor,MONDO:0021100;MONDO:0024883,luna,metastatic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.338528946747309,platform_constant,6.338528946747309,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011365,,,train,hesrt,samples/GSE298286/GSM9011365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011366,bone,disease,breast neoplasm;metastatic neoplasm,bone tissue,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,483,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002481,Bone metastatic breast tumor,MONDO:0021100;MONDO:0024883,luna,metastatic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.6054826743426385,platform_constant,3.6054826743426385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011366,,,train,hesrt,samples/GSE298286/GSM9011366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011367,bone,disease,breast neoplasm;metastatic neoplasm,bone element,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4102,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Bone metastatic breast tumor,MONDO:0021100;MONDO:0024883,luna,metastatic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.85423643425462,platform_constant,4.85423643425462,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011367,,,train,hesrt,samples/GSE298286/GSM9011367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011368,bone,disease,breast neoplasm;metastatic neoplasm,bone element,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,816,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001474,Bone metastatic breast tumor,MONDO:0021100;MONDO:0024883,luna,metastatic breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.2174916738739565,platform_constant,3.2174916738739565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011368,,,train,hesrt,samples/GSE298286/GSM9011368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011369,breast,disease,breast neoplasm,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,978,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Primary breast tumor,MONDO:0021100,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.985869972222098,platform_constant,7.985869972222098,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011369,,,train,hesrt,samples/GSE298286/GSM9011369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011370,breast,disease,breast neoplasm,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1911,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Primary breast tumor,MONDO:0021100,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.5716189864938945,platform_constant,6.5716189864938945,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011370,,,train,hesrt,samples/GSE298286/GSM9011370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011371,breast,disease,breast neoplasm,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Primary breast tumor,MONDO:0021100,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.81124004738677,platform_constant,10.81124004738677,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011371,,,train,hesrt,samples/GSE298286/GSM9011371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011372,breast,disease,breast neoplasm,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Primary breast tumor,MONDO:0021100,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,10.733673573182411,platform_constant,10.733673573182411,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011372,,,train,hesrt,samples/GSE298286/GSM9011372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011373,breast,disease,breast neoplasm,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4651,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Primary breast tumor,MONDO:0021100,luna,breast cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.2911121974722732,platform_constant,3.2911121974722732,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,41734374,,GSM9011373,,,train,hesrt,samples/GSE298286/GSM9011373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011374,bone,disease,breast neoplasm;metastatic neoplasm,bone tissue,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1211,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002481,Bone metastatic breast tumor,MONDO:0021100;MONDO:0024883,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.961064969034329,platform_constant,6.961064969034329,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011374,,,train,hesrt,samples/GSE298286/GSM9011374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9011376,breast,disease,breast neoplasm,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4926,In silico reconstruction of primary and metastatic tumor architecture using GIS-augmented spatial transcriptomics,GSE298286,GSE298286,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Primary breast tumor,MONDO:0021100,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.254582672007621,platform_constant,6.254582672007621,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41734374,,GSM9011376,,,train,hesrt,samples/GSE298286/GSM9011376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011925,brain,perturbation,,barrel cortex,primary tissue,Mus musculus,house mouse,neonatal or infant,male,MERFISH/MERSCOPE,MERSCOPE,False,,210307,Microglia-astrocyte crosstalk regulates synapse remodeling via Wnt signaling,GSE298314,GSE298314,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0010415,Barrel cortex,,luna,,Whisker lesioning of right snout at P4,age rule: postnatal day,neonatal or infant,P5,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,180,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40934914,,GSM9011925,,,val,sda-all,samples/GSE298314/GSM9011925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011926,brain,perturbation,,barrel cortex,primary tissue,Mus musculus,house mouse,neonatal or infant,male,MERFISH/MERSCOPE,MERSCOPE,False,,211398,Microglia-astrocyte crosstalk regulates synapse remodeling via Wnt signaling,GSE298314,GSE298314,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0010415,Barrel cortex,,luna,,Whisker lesioning of right snout at P4,age rule: postnatal day,neonatal or infant,P5,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,180,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40934914,,GSM9011926,,,val,sda-all,samples/GSE298314/GSM9011926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011927,brain,perturbation,,barrel cortex,primary tissue,Mus musculus,house mouse,neonatal or infant,female,MERFISH/MERSCOPE,MERSCOPE,False,,202554,Microglia-astrocyte crosstalk regulates synapse remodeling via Wnt signaling,GSE298314,GSE298314,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0010415,Barrel cortex,,luna,,Whisker lesioning of right snout at P4,age rule: postnatal day,neonatal or infant,P5,extracted field,Female,,,,,release v3,imaging-based,MERSCOPE,,,cell,180,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40934914,,GSM9011927,,,val,sda-all,samples/GSE298314/GSM9011927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9011928,brain,perturbation,,barrel cortex,primary tissue,Mus musculus,house mouse,neonatal or infant,female,MERFISH/MERSCOPE,MERSCOPE,False,,239321,Microglia-astrocyte crosstalk regulates synapse remodeling via Wnt signaling,GSE298314,GSE298314,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0010415,Barrel cortex,,luna,,Whisker lesioning of right snout at P4,age rule: postnatal day,neonatal or infant,P5,extracted field,Female,,,,,release v3,imaging-based,MERSCOPE,,,cell,180,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40934914,,GSM9011928,,,val,sda-all,samples/GSE298314/GSM9011928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9016866,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,Visium,Visium,True,blue bright-field stain (heuristic),979,Molecular pathology of acute spinal cord injury in middle-aged mice,GSE298545,GSE298545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"10uM sagittal section from the midline of 8mm of spinal cord, centered on t16",MONDO:0043797,luna,,Bl/J6,luna,juvenile,Young,extracted field,Female,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.077179370339766,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40653490,,GSM9016866,,,test,sda-all,samples/GSE298545/GSM9016866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM9016867,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,juvenile,female,Visium,Visium,True,blue bright-field stain (heuristic),603,Molecular pathology of acute spinal cord injury in middle-aged mice,GSE298545,GSE298545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"10uM sagittal section from the midline of 8mm of spinal cord, centered on t17",MONDO:0043797,luna,,Bl/J6,luna,juvenile,Young,extracted field,Female,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.125137315673252,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40653490,,GSM9016867,,,test,sda-all,samples/GSE298545/GSM9016867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM9016868,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,aged,female,Visium,Visium,True,blue bright-field stain (heuristic),884,Molecular pathology of acute spinal cord injury in middle-aged mice,GSE298545,GSE298545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"10uM sagittal section from the midline of 8mm of spinal cord, centered on t18",MONDO:0043797,luna,,Bl/J6,luna,aged,Aged,extracted field,Female,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.159923309939592,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40653490,,GSM9016868,,,test,sda-all,samples/GSE298545/GSM9016868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9016869,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,aged,female,Visium,Visium,True,blue bright-field stain (heuristic),816,Molecular pathology of acute spinal cord injury in middle-aged mice,GSE298545,GSE298545,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"10uM sagittal section from the midline of 8mm of spinal cord, centered on t19",MONDO:0043797,luna,,Bl/J6,luna,aged,Aged,extracted field,Female,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.198485634943485,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,40653490,,GSM9016869,,,test,sda-all,samples/GSE298545/GSM9016869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9017964,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,108533,MERFISH analysis of Sst-Cre mediated Dnmt1 knockout at E16.5,GSE298591,GSE298591,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Mouse Brain,,luna,,Control,age rule: embryonic day,embryonic,E16.5,not stated,,,,,,release v3,imaging-based,Merscope,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40707493,,GSM9017964,,,train,sda-all,samples/GSE298591/GSM9017964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9017965,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,110004,MERFISH analysis of Sst-Cre mediated Dnmt1 knockout at E16.5,GSE298591,GSE298591,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Mouse Brain,,luna,,Knockout,age rule: embryonic day,embryonic,E16.5,not stated,,,,,,release v3,imaging-based,Merscope,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40707493,,GSM9017965,,,train,sda-all,samples/GSE298591/GSM9017965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM9019992,heart,normal,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Stereo-seq,Stereo-seq,False,,25458,A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice,GSE298650,GSE298650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,,luna,,,age rule: postnatal day,neonatal or infant,postnatal day 0,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,23615,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,40890142,,GSM9019992,,,train,sda-all,samples/GSE298650/GSM9019992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9019993,heart,normal,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Stereo-seq,Stereo-seq,False,,41005,A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice,GSE298650,GSE298650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,,luna,,,age rule: postnatal day,neonatal or infant,postnatal day 7,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,22771,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,40890142,,GSM9019993,,,train,sda-all,samples/GSE298650/GSM9019993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9019994,heart,normal,,heart,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Stereo-seq,Stereo-seq,False,,34930,A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice,GSE298650,GSE298650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,,luna,,,age rule: postnatal day,neonatal or infant,postnatal day 7,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,23543,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,40890142,,GSM9019994,,,train,sda-all,samples/GSE298650/GSM9019994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9019995,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Stereo-seq,Stereo-seq,False,,42034,A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice,GSE298650,GSE298650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,,luna,,,age rule: postnatal day,juvenile,postnatal day 56,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,25607,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,40890142,,GSM9019995,,,train,sda-all,samples/GSE298650/GSM9019995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9019996,heart,normal,,heart,primary tissue,Mus musculus,house mouse,adult,unknown,Stereo-seq,Stereo-seq,False,,42620,A dataset of spatially resolved transcriptomics of post-natal cardiac development in mice,GSE298650,GSE298650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,,luna,,,age rule: postnatal day,juvenile,postnatal day 56,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,21755,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,40890142,,GSM9019996,,,train,sda-all,samples/GSE298650/GSM9019996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9020679,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2447,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020679,,,train,sda-all,samples/GSE298680/GSM9020679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9020680,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2587,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020680,,,train,sda-all,samples/GSE298680/GSM9020680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020681,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2073,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020681,,,train,sda-all,samples/GSE298680/GSM9020681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020682,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2492,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020682,,,train,sda-all,samples/GSE298680/GSM9020682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020683,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2464,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020683,,,train,sda-all,samples/GSE298680/GSM9020683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9020684,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2451,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020684,,,train,sda-all,samples/GSE298680/GSM9020684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020685,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1823,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020685,,,train,sda-all,samples/GSE298680/GSM9020685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020686,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2114,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020686,,,train,sda-all,samples/GSE298680/GSM9020686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9020687,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2176,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020687,,,train,sda-all,samples/GSE298680/GSM9020687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9020688,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2097,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020688,,,train,sda-all,samples/GSE298680/GSM9020688,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020689,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2402,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020689,,,train,sda-all,samples/GSE298680/GSM9020689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9020690,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2536,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Control,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020690,,,train,sda-all,samples/GSE298680/GSM9020690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020691,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2305,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020691,,,train,sda-all,samples/GSE298680/GSM9020691,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020692,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1901,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020692,,,train,sda-all,samples/GSE298680/GSM9020692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020693,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1760,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020693,,,train,sda-all,samples/GSE298680/GSM9020693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020694,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1777,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020694,,,train,sda-all,samples/GSE298680/GSM9020694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020695,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2450,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020695,,,train,sda-all,samples/GSE298680/GSM9020695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020696,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2463,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020696,,,train,sda-all,samples/GSE298680/GSM9020696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020697,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2487,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020697,,,train,sda-all,samples/GSE298680/GSM9020697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020698,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,2496,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020698,,,train,sda-all,samples/GSE298680/GSM9020698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020699,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1765,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020699,,,train,sda-all,samples/GSE298680/GSM9020699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020700,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1839,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020700,,,train,sda-all,samples/GSE298680/GSM9020700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020701,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1908,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020701,,,train,sda-all,samples/GSE298680/GSM9020701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9020702,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1833,A molecular atlas of cellular vulnerability and resilience in the parkinsonian striatum.,GSE298680,GSE298680,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,mild 6OHA injeciton (0.6 ug),luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9020702,,,train,sda-all,samples/GSE298680/GSM9020702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9021012,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,2025,Spatially resolved single-cell analysis uncovers protein kinase Cδ-expressing microglia with anti-tumor activity in glioblastoma [Spatial Transcriptomics],GSE298689,GSE298689,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,glioblastoma,treated,age rule: age with unit,juvenile,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.0906251093015,platform_constant,4.0906251093015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41503214,,GSM9021012,,,train,hesrt,samples/GSE298689/GSM9021012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9022158,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,464,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,E13.5 transverse FFPE sections at level of umbilicus,,luna,,Hand1 wildtype,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,9.10975037348554,platform_constant,9.10975037348554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022158,,,train,hesrt,samples/GSE298742/GSM9022158,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022159,embryo (whole),normal,,umbilicus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,335,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0007118,E13.5 transverse FFPE sections at level of umbilicus,,luna,,Hand1 wildtype,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,9.10975037348554,platform_constant,9.10975037348554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022159,,,train,hesrt,samples/GSE298742/GSM9022159,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022160,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,330,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,E13.5 transverse FFPE sections at level of umbilicus,,luna,,Hand1 wildtype,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,8.574929257125442,platform_constant,8.574929257125442,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022160,,,train,hesrt,samples/GSE298742/GSM9022160,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.32, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022161,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,426,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,E13.5 transverse FFPE sections at level of umbilicus,,luna,,Hand1 wildtype,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,9.10975037348554,platform_constant,9.10975037348554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022161,,,train,hesrt,samples/GSE298742/GSM9022161,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022162,embryo (whole),normal,,umbilicus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,467,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0007118,E13.5 transverse FFPE sections at level of umbilicus,,luna,,Hand1 wildtype,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.980048127597761,platform_constant,6.980048127597761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022162,,,train,hesrt,samples/GSE298742/GSM9022162,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022163,embryo (whole),normal,,umbilicus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,575,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0007118,E13.5 transverse FFPE sections at level of umbilicus,,luna,,Hand1 wildtype,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.980048127597761,platform_constant,6.980048127597761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022163,,,train,hesrt,samples/GSE298742/GSM9022163,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022164,embryo (whole),normal,,umbilicus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,305,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0007118,E13.5 transverse FFPE sections at level of umbilicus,,luna,,Hand1 wildtype,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.896551724137931,platform_constant,6.896551724137931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022164,,,train,hesrt,samples/GSE298742/GSM9022164,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022165,embryo (whole),normal,,umbilicus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,464,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0007118,E13.5 transverse FFPE sections at level of umbilicus,,luna,,Hand1 wildtype,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,8.574929257125442,platform_constant,8.574929257125442,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022165,,,train,hesrt,samples/GSE298742/GSM9022165,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM9022166,embryo (whole),disease,omphalocele,umbilicus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,143,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0007118,E13.5 transverse FFPE sections at level of umbilicus,MONDO:0019015,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.896551724137931,platform_constant,6.896551724137931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022166,,,train,hesrt,samples/GSE298742/GSM9022166,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.49, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9022167,embryo (whole),disease,omphalocele,embryo,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,153,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,E13.5 transverse FFPE sections at level of umbilicus,MONDO:0019015,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.980048127597761,platform_constant,6.980048127597761,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022167,,,train,hesrt,samples/GSE298742/GSM9022167,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.45, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM9022168,embryo (whole),disease,omphalocele,embryo,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,532,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,E13.5 transverse FFPE sections at level of umbilicus,MONDO:0019015,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,9.10975037348554,platform_constant,9.10975037348554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022168,,,train,hesrt,samples/GSE298742/GSM9022168,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9022169,embryo (whole),disease,omphalocele,embryo,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,598,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,E13.5 transverse FFPE sections at level of umbilicus,MONDO:0019015,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,8.574929257125442,platform_constant,8.574929257125442,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022169,,,train,hesrt,samples/GSE298742/GSM9022169,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.17, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9022170,embryo (whole),disease,omphalocele,umbilicus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,125,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0007118,E13.5 transverse FFPE sections at level of umbilicus,MONDO:0019015,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.896551724137931,platform_constant,6.896551724137931,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022170,,,train,hesrt,samples/GSE298742/GSM9022170,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.32, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9022171,embryo (whole),disease,omphalocele,umbilicus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,257,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0007118,E13.5 transverse FFPE sections at level of umbilicus,MONDO:0019015,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,7.488636437889696,platform_constant,7.488636437889696,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022171,,,train,hesrt,samples/GSE298742/GSM9022171,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.43, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM9022172,embryo (whole),disease,omphalocele,umbilicus,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium,Visium,True,H&E,299,Hand1 gene replacement with Hand2 reveals overlap in function with unique occurrence of omphalocele and heart defects [Spatial Transcriptomics],GSE298742,GSE298742+GSE299579,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0007118,E13.5 transverse FFPE sections at level of umbilicus,MONDO:0019015,mondo_predicate (Luna: perturbation),,Hand1^Hand2/Hand2,age rule: embryonic day,embryonic,13.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,8.0,platform_constant,8.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9022172,,,train,hesrt,samples/GSE298742/GSM9022172,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.41000000000000003, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM9022964,skin,disease,melanocytic nevus;melanoma,mole,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2892,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,GSE298774,GSE298774,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:1000010,Skin,MONDO:0005073;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,5.117955386377146,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022964,,,test,sda-all,samples/GSE298774/GSM9022964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022965,skin,disease,melanocytic nevus;melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2260,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,GSE298774,GSE298774,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005073;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.803979092530061,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022965,,,test,sda-all,samples/GSE298774/GSM9022965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM9022967,skin,disease,melanocytic nevus;melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,14336,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,GSE298774,GSE298774,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005073;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,11.27054815479372,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022967,,,test,sda-all,samples/GSE298774/GSM9022967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9022968,skin,disease,melanocytic nevus;melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4151,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,GSE298774,GSE298774,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005073;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,8.906421050284752,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022968,,,test,sda-all,samples/GSE298774/GSM9022968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022969,skin,disease,melanocytic nevus;melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,14328,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,GSE298774,GSE298774,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005073;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,8.736095165919172,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022969,,,test,sda-all,samples/GSE298774/GSM9022969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9022970,skin,disease,melanocytic nevus;melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,6415,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,GSE298774,GSE298774,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005073;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,9.077969245029756,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022970,,,test,sda-all,samples/GSE298774/GSM9022970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9022971,skin,disease,melanocytic nevus;melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,14210,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,GSE298774,GSE298774,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005073;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,8.795054548746215,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022971,,,test,sda-all,samples/GSE298774/GSM9022971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022972,skin,disease,melanocytic nevus;melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,14145,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,GSE298774,GSE298774,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005073;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,8.588860692266174,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022972,,,test,sda-all,samples/GSE298774/GSM9022972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9022973,skin,disease,melanocytic nevus;melanoma,mole,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4991,Spatial gene expression and microenvironmental changes in the transition of nevus to melanoma,GSE298774,GSE298774,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:1000010,Skin,MONDO:0005073;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,7.012132840270801,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42258703,,GSM9022973,,,test,sda-all,samples/GSE298774/GSM9022973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9025382,lymph node,normal,,lymph node,primary tissue,Homo sapiens,human,not stated,female,Visium HD,Visium HD,True,H&E,31695,Breast Cancer Remodels Lymphatics in Sentinel Lymph Nodes,GSE298872,GSE298872,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,lymph node,,luna,,non-metastatic,luna,not stated,,extracted field,female,GSE298872:patient 3,patient 3,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249124,,GSM9025382,,,train,hesrt,samples/GSE298872/GSM9025382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9025383,lymph node,disease,breast cancer,lymph node,metastasis,Homo sapiens,human,not stated,female,Visium HD,Visium HD,True,H&E,526905,Breast Cancer Remodels Lymphatics in Sentinel Lymph Nodes,GSE298872,GSE298872,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,lymph node,MONDO:0007254,luna,,metastatic,luna,not stated,,extracted field,female,GSE298872:patient 3,patient 3,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249124,,GSM9025383,,,train,hesrt,samples/GSE298872/GSM9025383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9025384,lymph node,normal,,lymph node,primary tissue,Homo sapiens,human,not stated,female,Visium HD,Visium HD,True,H&E,20644,Breast Cancer Remodels Lymphatics in Sentinel Lymph Nodes,GSE298872,GSE298872,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,lymph node,,luna,,non-metastatic,luna,not stated,,extracted field,female,GSE298872:patient 5,patient 5,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249124,,GSM9025384,,,train,hesrt,samples/GSE298872/GSM9025384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9025385,lymph node,disease,breast cancer,lymph node,metastasis,Homo sapiens,human,not stated,female,Visium HD,Visium HD,True,H&E,586136,Breast Cancer Remodels Lymphatics in Sentinel Lymph Nodes,GSE298872,GSE298872,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,lymph node,MONDO:0007254,luna,,metastatic,luna,not stated,,extracted field,female,GSE298872:patient 5,patient 5,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249124,,GSM9025385,,,train,hesrt,samples/GSE298872/GSM9025385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9026037,oral cavity,normal,,major salivary gland,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1849,Salivary gland transcriptomic analysis in the IL-14α transgenic mouse model of Sjögren’s disease using Visium V1 3' spatial gene expression assay,GSE298921,GSE298921,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001829,Submandibular and sublingual gland,,luna,,C57BL6,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,56748,counts,pixel,4.091874966835359,platform_constant,4.091874966835359,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40697343,,GSM9026037,,,test,hesrt,samples/GSE298921/GSM9026037,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9026038,oral cavity,disease,,major salivary gland,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2182,Salivary gland transcriptomic analysis in the IL-14α transgenic mouse model of Sjögren’s disease using Visium V1 3' spatial gene expression assay,GSE298921,GSE298921,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001829,Submandibular and sublingual gland,,luna,,IL-14a transgenic,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,56748,counts,pixel,4.181875030987711,platform_constant,4.181875030987711,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40697343,,GSM9026038,,,test,hesrt,samples/GSE298921/GSM9026038,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9030938,bone,disease,osteosarcoma,bone tissue,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,3053,Immunosuppressive tumor microenvironment of osteosarcoma [Spatial transcriptomics],GSE299025,GSE299025,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002481,Osteosarcoma,MONDO:0009807,luna,osteosarcoma,,luna,not stated,,extracted field,male,GSE299025:PatientA,PatientA,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.075938295754663,platform_constant,4.075938295754663,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40647416,,GSM9030938,,,train,hesrt,samples/GSE299025/GSM9030938,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9030939,bone,disease,osteosarcoma,bone tissue,tumour tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,H&E,3020,Immunosuppressive tumor microenvironment of osteosarcoma [Spatial transcriptomics],GSE299025,GSE299025,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002481,Osteosarcoma,MONDO:0009807,luna,osteosarcoma,,luna,not stated,,extracted field,female,GSE299025:PatientB,PatientB,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.075938295754663,platform_constant,4.075938295754663,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40647416,,GSM9030939,,,train,hesrt,samples/GSE299025/GSM9030939,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9031082,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1115,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.312575267395785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031082,,,val,sda-all,samples/GSE299027/GSM9031082,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9031083,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2590,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.875264118428958,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031083,,,val,sda-all,samples/GSE299027/GSM9031083,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9031084,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7317,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,9.989101044231838,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031084,,,val,sda-all,samples/GSE299027/GSM9031084,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9031085,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3629,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.543405799278704,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031085,,,val,sda-all,samples/GSE299027/GSM9031085,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031086,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3237,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.359818469668191,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031086,,,val,sda-all,samples/GSE299027/GSM9031086,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9031087,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4906,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,9.04199040242302,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031087,,,val,sda-all,samples/GSE299027/GSM9031087,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9031088,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2028,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.9643758976813785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031088,,,val,sda-all,samples/GSE299027/GSM9031088,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9031089,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),6226,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.963449277911202,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031089,,,val,sda-all,samples/GSE299027/GSM9031089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9031090,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),823,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.6182607082662974,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031090,,,val,sda-all,samples/GSE299027/GSM9031090,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031091,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2022,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.533402568801713,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031091,,,val,sda-all,samples/GSE299027/GSM9031091,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031092,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),805,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,1.835548268003098,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,,,GSM9031092,,,val,sda-all,samples/GSE299027/GSM9031092,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031093,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2465,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.3763156154944465,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031093,,,val,sda-all,samples/GSE299027/GSM9031093,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9031094,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2268,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.34479370439839,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031094,,,val,sda-all,samples/GSE299027/GSM9031094,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9031095,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2471,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9031095,,,val,sda-all,samples/GSE299027/GSM9031095,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9031096,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1196,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.7933869625432814,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031096,,,val,sda-all,samples/GSE299027/GSM9031096,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9031097,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3377,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.4811306662618335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031097,,,val,sda-all,samples/GSE299027/GSM9031097,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9031098,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2345,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.490569091342601,VERIFIED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,,,GSM9031098,,,val,sda-all,samples/GSE299027/GSM9031098,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9031099,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1164,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.6800705627540857,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031099,,,val,sda-all,samples/GSE299027/GSM9031099,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031100,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2008,Molecular Characterization of Meningioma,GSE299027,GSE299027,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Fresh frozen human surgical samples,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.673935994052523,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9031100,,,val,sda-all,samples/GSE299027/GSM9031100,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9031941,skin,disease,palmoplantar pustulosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),100038,Immune Dynamics in Palmoplantar Pustulosis Unveiled by Single-Cell and High-Resolution Spatial Transcriptomics [Spatial Transcriptomics],GSE299051,GSE299051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0015597,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,0.9460136408936302,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41740929,,GSM9031941,,,val,sda-all,samples/GSE299051/GSM9031941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9031942,skin,disease,palmoplantar pustulosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),84472,Immune Dynamics in Palmoplantar Pustulosis Unveiled by Single-Cell and High-Resolution Spatial Transcriptomics [Spatial Transcriptomics],GSE299051,GSE299051,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0015597,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,0.9464476822397502,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41740929,,GSM9031942,,,val,sda-all,samples/GSE299051/GSM9031942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9032276,lung,disease,small cell lung carcinoma,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,154818,Actin Dysregulation Induces Neuroendocrine 1 Plasticity and 2 Immune Evasion: A Vulnerability of Small Cell Lung Cancer,GSE299069,GSE299069,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Small Cell Lung Cancer,MONDO:0008433,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999934284641382,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41353272,,GSM9032276,,,train,sda-all,samples/GSE299069/GSM9032276,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9032277,lung,disease,small cell lung carcinoma,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,342845,Actin Dysregulation Induces Neuroendocrine 1 Plasticity and 2 Immune Evasion: A Vulnerability of Small Cell Lung Cancer,GSE299069,GSE299069,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Small Cell Lung Cancer,MONDO:0008433,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500014079747691,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41353272,,GSM9032277,,,train,sda-all,samples/GSE299069/GSM9032277,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9034732,kidney,disease,tuberous sclerosis;kidney cancer;angiomyolipoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4938,Profiling the Microenvironment in Tuberous Sclerosis Complex-Associated Angiomyolipoma: Insights from Spatial Gene Expression Analysis,GSE299165,GSE299165,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Kidney Cancer,MONDO:0001734;MONDO:0002367;MONDO:0002603,luna,Kidney Cancer,Kidney Cancer,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,9.36395645015989,platform_constant,9.36395645015989,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41309810,,GSM9034732,,,train,hesrt,samples/GSE299165/GSM9034732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9034733,kidney,disease,angiomyolipoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Profiling the Microenvironment in Tuberous Sclerosis Complex-Associated Angiomyolipoma: Insights from Spatial Gene Expression Analysis,GSE299165,GSE299165,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Sporadic Angiomyolipoma,MONDO:0002603,luna,angiomyolipoma,Sporadic Angiomyolipoma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.343037215296924,platform_constant,7.343037215296924,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41309810,,GSM9034733,,,train,hesrt,samples/GSE299165/GSM9034733,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9034734,kidney,disease,tuberous sclerosis;angiomyolipoma,kidney,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3428,Profiling the Microenvironment in Tuberous Sclerosis Complex-Associated Angiomyolipoma: Insights from Spatial Gene Expression Analysis,GSE299165,GSE299165,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Angiomyolipoma associated with Tuberous Sclerosis Complex,MONDO:0001734;MONDO:0002603,luna,angiomyolipoma,Tuberous Sclerosis Complex-associated Angiomyolipoma,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.657821208364135,platform_constant,6.657821208364135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41309810,,GSM9034734,,,train,hesrt,samples/GSE299165/GSM9034734,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035023,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,51372,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,,luna,,Ctrl,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999815452755906,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035023,,,train,sda-all,samples/GSE299193/GSM9035023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9035024,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,84790,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,,luna,,Ctrl,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.500001379995584,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035024,,,train,sda-all,samples/GSE299193/GSM9035024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9035025,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,75265,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,,luna,,Ctrl,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000064770195346,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035025,,,train,sda-all,samples/GSE299193/GSM9035025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035026,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,98646,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,,luna,,Ctrl,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.499966958113054,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035026,,,train,sda-all,samples/GSE299193/GSM9035026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9035027,bone marrow,disease,monoclonal gammopathy of uncertain significance;immune system cancer;plasma cell neoplasm,bone marrow,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,162109,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0004225;MONDO:0000621;MONDO:0004959,luna,,MGUS,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999917159109737,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035027,,,train,sda-all,samples/GSE299193/GSM9035027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035028,bone marrow,disease,monoclonal gammopathy of uncertain significance;immune system cancer;plasma cell neoplasm,bone marrow,primary tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,172708,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0004225;MONDO:0000621;MONDO:0004959,luna,,MGUS,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49997938994229185,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035028,,,train,sda-all,samples/GSE299193/GSM9035028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035029,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,160479,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,MM,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.499991935483871,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035029,,,train,sda-all,samples/GSE299193/GSM9035029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9035030,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,150922,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,MM,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000017027652909,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035030,,,train,sda-all,samples/GSE299193/GSM9035030,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035031,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,124488,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,MM,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49998619852048143,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035031,,,train,sda-all,samples/GSE299193/GSM9035031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035032,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,68334,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,MM,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000029491565412,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035032,,,train,sda-all,samples/GSE299193/GSM9035032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035033,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,42857,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,MM,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000154830718414,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035033,,,train,sda-all,samples/GSE299193/GSM9035033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9035034,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,136914,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,MM,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49996930422919506,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035034,,,train,sda-all,samples/GSE299193/GSM9035034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035035,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,57291,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,MM,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000350140056022,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035035,,,train,sda-all,samples/GSE299193/GSM9035035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035036,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,99208,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,MM,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49999827196903374,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035036,,,train,sda-all,samples/GSE299193/GSM9035036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035037,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,69669,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,MM,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000056420672534,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035037,,,train,sda-all,samples/GSE299193/GSM9035037,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035038,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,31873,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,MM,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49998862320039705,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035038,,,train,sda-all,samples/GSE299193/GSM9035038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035039,bone marrow,disease,smoldering plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,65476,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0005235,luna,,SM,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999896983682216,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035039,,,train,sda-all,samples/GSE299193/GSM9035039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035040,bone marrow,disease,smoldering plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,89052,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0005235,luna,,SM,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49996325330720237,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035040,,,train,sda-all,samples/GSE299193/GSM9035040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035041,bone marrow,disease,smoldering plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,27271,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0005235,luna,,SM,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49998463114754094,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035041,,,train,sda-all,samples/GSE299193/GSM9035041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035042,bone marrow,disease,smoldering plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,102798,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0005235,luna,,SM,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000234741784038,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035042,,,train,sda-all,samples/GSE299193/GSM9035042,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9035043,bone marrow,disease,smoldering plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,29613,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0005235,luna,,SM,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49999522049451944,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035043,,,train,sda-all,samples/GSE299193/GSM9035043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9035044,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,54315,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human],GSE299193,GSE299193+GSE299207,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,bone marrow,MONDO:0009693,luna,,RM,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999917776681466,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035044,,,train,sda-all,samples/GSE299193/GSM9035044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9035090,bone marrow,normal,,bone marrow,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,246079,Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics,GSE299207,GSE299207,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002371,,,luna,,Ctrl,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999961200206932,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,40643106,,GSM9035090,,,train,sda-all,samples/GSE299207/GSM9035090,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM8983566,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,71399,Positionally distinct interferon-stimulated dermal immune-acting fibroblasts promote neutrophil recruitment in Sweet's syndrome.,GSE299256,GSE299256,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,Skin,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,cosmx,,,cell,1013,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,40516577,,GSM8983566,,,train,sda-all,samples/GSE299256/GSM8983566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.21, ""uberon"": 0.34, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9038185,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3783,Meningioma cell reprogramming and microenvironment interactions underlie brain invasion,GSE299374,GSE299374,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.42327799708551,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41476144,,GSM9038185,,,train,sda-all,samples/GSE299374/GSM9038185,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9038186,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2959,Meningioma cell reprogramming and microenvironment interactions underlie brain invasion,GSE299374,GSE299374,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.42252065045899,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41476144,,GSM9038186,,,train,sda-all,samples/GSE299374/GSM9038186,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9038419,brain,normal,,cortex,primary tissue,Monodelphis domestica,gray short-tailed opossum,adult,male,Stereo-seq,Stereo-seq,False,,80369,Comparative transcriptomics reveals differences in cortical cell type organization between metatherian and eutherian mammals [Stereo-seq],GSE299386,GSE299386,13616,Monodelphis domestica,13616,,False,False,GEO organism field,Monodelphis domestica,Monodelphis domestica,luna,UBERON:0001851,Cortex,,luna,,,luna,adult,6 months,extracted field,male,,,,,release v3,sequencing-based,Stereo-seq,,,cell,30613,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,42005962,,GSM9038419,,,train,sda-all,samples/GSE299386/GSM9038419,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9038420,brain,normal,,cortex,primary tissue,Mus musculus,house mouse,juvenile,male,Stereo-seq,Stereo-seq,False,,120239,Comparative transcriptomics reveals differences in cortical cell type organization between metatherian and eutherian mammals [Stereo-seq],GSE299386,GSE299386,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001851,Cortex,,luna,,,age rule: postnatal day,juvenile,P40,extracted field,male,,,,,release v3,sequencing-based,Stereo-seq,,,cell,61317,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,42005962,,GSM9038420,,,train,sda-all,samples/GSE299386/GSM9038420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9039187,brain,disease,glioma,brain,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,221794,Combined epigenetic therapy with FACT and BET inhibitors remodels chromatin and disrupts oncogenic transcription in Diffuse Midline Glioma [Xenium],GSE299434,GSE299434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,MONDO:0021042,luna,,"Vehicle (0.9% saline, 5% PEG400 and 5% TWEEN-80)",age rule: age range midpoint,juvenile,5-7 weeks,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000092524056254,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41533777,,GSM9039187,,,train,sda-all,samples/GSE299434/GSM9039187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9039188,brain,disease,glioma,brain,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,226967,Combined epigenetic therapy with FACT and BET inhibitors remodels chromatin and disrupts oncogenic transcription in Diffuse Midline Glioma [Xenium],GSE299434,GSE299434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,MONDO:0021042,luna,,CBL0137,age rule: age range midpoint,juvenile,5-7 weeks,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000065316786414,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41533777,,GSM9039188,,,train,sda-all,samples/GSE299434/GSM9039188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9039189,brain,disease,glioma,brain,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,210460,Combined epigenetic therapy with FACT and BET inhibitors remodels chromatin and disrupts oncogenic transcription in Diffuse Midline Glioma [Xenium],GSE299434,GSE299434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,MONDO:0021042,luna,,JQ1,age rule: age range midpoint,juvenile,5-7 weeks,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000021765627721,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41533777,,GSM9039189,,,train,sda-all,samples/GSE299434/GSM9039189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9039190,brain,disease,glioma,brain,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,129253,Combined epigenetic therapy with FACT and BET inhibitors remodels chromatin and disrupts oncogenic transcription in Diffuse Midline Glioma [Xenium],GSE299434,GSE299434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,,MONDO:0021042,luna,,CBL0137 + JQ1,age rule: age range midpoint,juvenile,5-7 weeks,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.500004018738805,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41533777,,GSM9039190,,,train,sda-all,samples/GSE299434/GSM9039190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9039782,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1268,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.168371971228302,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039782,,,train,sda-all,samples/GSE299494/GSM9039782,sda-tissue-disease-2.5,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9039783,unknown,disease,canine osteosarcoma;osteosarcoma,,metastasis,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1466,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.1687258862226,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039783,,,train,sda-all,samples/GSE299494/GSM9039783,sda-tissue-disease-2.5,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9039784,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,2345,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.169454683935197,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039784,,,train,sda-all,samples/GSE299494/GSM9039784,sda-tissue-disease-2.5,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9039785,unknown,disease,canine osteosarcoma;osteosarcoma,,metastasis,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1933,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.1688943381325005,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039785,,,train,sda-all,samples/GSE299494/GSM9039785,sda-tissue-disease-2.5,"{""organ"": 0.73, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9039786,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,998,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.169136781803582,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039786,,,train,sda-all,samples/GSE299494/GSM9039786,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM9039787,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1039,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.168803285108796,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039787,,,train,sda-all,samples/GSE299494/GSM9039787,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9039788,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1993,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.168080227043663,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039788,,,train,sda-all,samples/GSE299494/GSM9039788,sda-tissue-disease-2.5,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9039789,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1765,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.170675788309616,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039789,,,train,sda-all,samples/GSE299494/GSM9039789,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.99}",,
GSM9039790,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1071,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.169188425110498,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039790,,,train,sda-all,samples/GSE299494/GSM9039790,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9039791,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1232,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.169206854389578,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039791,,,train,sda-all,samples/GSE299494/GSM9039791,sda-tissue-disease-2.5,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9039792,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,982,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.171179582920709,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039792,,,train,sda-all,samples/GSE299494/GSM9039792,sda-tissue-disease-2.5,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM9039793,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1896,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.171362510802886,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039793,,,train,sda-all,samples/GSE299494/GSM9039793,sda-tissue-disease-2.5,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9039794,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1514,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.170419045834522,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039794,,,train,sda-all,samples/GSE299494/GSM9039794,sda-tissue-disease-2.5,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9039795,bone,disease,canine osteosarcoma;osteosarcoma,bone tissue,tumour tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,True,H&E,1185,Spatial transcriptomic mapping of canine osteosarcoma reveals immune microenvironment features linked to survival,GSE299494,GSE299494,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,,luna,UBERON:0002481,tumor,MONDO:0700140;MONDO:0009807,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,37952,counts,um,1.0,verified,4.170884539903666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42056464,,GSM9039795,,,train,sda-all,samples/GSE299494/GSM9039795,sda-tissue-disease-2.5,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9040999,bladder,disease,,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),695646,Spatial transcriptomics of bladder cancer with squamous differentiation,GSE299573,GSE299573,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder cancer,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.2314471035838173,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41917522,,GSM9040999,,,train,sda-all,samples/GSE299573/GSM9040999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9042005,brain,disease,infectious disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5990,Subclinical Neonatal HSV-1 Infection Triggers Immune Responses and Modulates Neurological Pathways Leading to Long-Term Sequelae [Visium],GSE299610,GSE299610,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole brain,MONDO:0005550,luna,,Infection with 100PFU HSV-1,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,19472,counts,um,1.0,verified,5.5317042160215495,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9042005,,,train,sda-all,samples/GSE299610/GSM9042005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 0.73}",disease_status,low_confidence_annotation
GSM9042006,brain,disease,infectious disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),6198,Subclinical Neonatal HSV-1 Infection Triggers Immune Responses and Modulates Neurological Pathways Leading to Long-Term Sequelae [Visium],GSE299610,GSE299610,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole brain,MONDO:0005550,luna,,Infection with mockulum,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32596,counts,um,1.0,verified,5.529716625986959,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9042006,,,train,sda-all,samples/GSE299610/GSM9042006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9042305,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2154,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.103527782749221,platform_constant,4.103527782749221,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042305,,,train,hesrt,samples/GSE299631/GSM9042305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9042306,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,925,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509443,platform_constant,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042306,,,train,hesrt,samples/GSE299631/GSM9042306,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9042307,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2147,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,TAC regimen,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.08831036850946,platform_constant,4.08831036850946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042307,,,train,hesrt,samples/GSE299631/GSM9042307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042308,breast,normal,,mammary gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1233,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,Mammary gland,,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509443,platform_constant,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042308,,,train,hesrt,samples/GSE299631/GSM9042308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9042309,breast,normal,,mammary gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1047,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,Mammary gland,,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.0883103685094655,platform_constant,4.0883103685094655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042309,,,train,hesrt,samples/GSE299631/GSM9042309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9042310,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2057,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509453,platform_constant,4.088310368509453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042310,,,train,hesrt,samples/GSE299631/GSM9042310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9042311,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,822,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509453,platform_constant,4.088310368509453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042311,,,train,hesrt,samples/GSE299631/GSM9042311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042312,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1057,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,TAC regimen,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509446,platform_constant,4.088310368509446,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042312,,,train,hesrt,samples/GSE299631/GSM9042312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9042313,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3448,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.10370368466251,platform_constant,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042313,,,train,hesrt,samples/GSE299631/GSM9042313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9042314,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2470,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.10370368466251,platform_constant,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042314,,,train,hesrt,samples/GSE299631/GSM9042314,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042315,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2130,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.10370368466251,platform_constant,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042315,,,train,hesrt,samples/GSE299631/GSM9042315,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042316,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2267,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.103527782749201,platform_constant,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042316,,,train,hesrt,samples/GSE299631/GSM9042316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042317,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3019,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509449,platform_constant,4.088310368509449,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042317,,,train,hesrt,samples/GSE299631/GSM9042317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042318,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3692,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,TAC regimen,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509449,platform_constant,4.088310368509449,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042318,,,train,hesrt,samples/GSE299631/GSM9042318,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9042319,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1325,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,TAC regimen,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.10370368466251,platform_constant,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042319,,,train,hesrt,samples/GSE299631/GSM9042319,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9042320,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3907,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,TAC regimen,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509443,platform_constant,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042320,,,train,hesrt,samples/GSE299631/GSM9042320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042321,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3561,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,TAC regimen,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.103527782749239,platform_constant,4.103527782749239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042321,,,train,hesrt,samples/GSE299631/GSM9042321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042322,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1833,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,TAC regimen,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.103527782749201,platform_constant,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042322,,,train,hesrt,samples/GSE299631/GSM9042322,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9042323,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4499,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,TAC regimen,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.103527782749239,platform_constant,4.103527782749239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042323,,,train,hesrt,samples/GSE299631/GSM9042323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042324,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2806,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509435,platform_constant,4.088310368509435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042324,,,train,hesrt,samples/GSE299631/GSM9042324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9042325,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2440,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509453,platform_constant,4.088310368509453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042325,,,train,hesrt,samples/GSE299631/GSM9042325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9042326,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2790,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509443,platform_constant,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042326,,,train,hesrt,samples/GSE299631/GSM9042326,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9042327,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2888,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509443,platform_constant,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042327,,,train,hesrt,samples/GSE299631/GSM9042327,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9042328,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4371,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509443,platform_constant,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042328,,,train,hesrt,samples/GSE299631/GSM9042328,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9042329,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2695,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.10370368466251,platform_constant,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042329,,,train,hesrt,samples/GSE299631/GSM9042329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042330,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2776,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.10370368466251,platform_constant,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042330,,,train,hesrt,samples/GSE299631/GSM9042330,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042331,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3461,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509479,platform_constant,4.088310368509479,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042331,,,train,hesrt,samples/GSE299631/GSM9042331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042332,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4382,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 12mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.088310368509463,platform_constant,4.088310368509463,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042332,,,train,hesrt,samples/GSE299631/GSM9042332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9042333,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2590,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.103527782749201,platform_constant,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042333,,,train,hesrt,samples/GSE299631/GSM9042333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9042334,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2771,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.103527782749201,platform_constant,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042334,,,train,hesrt,samples/GSE299631/GSM9042334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042335,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3605,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.08831036850946,platform_constant,4.08831036850946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042335,,,train,hesrt,samples/GSE299631/GSM9042335,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9042336,breast,disease,breast cancer,mammary gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3224,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,KB1P mammary tumor,MONDO:0007254,luna,,cisplatin 6mg/kg,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.10370368466251,platform_constant,4.10370368466251,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042336,,,train,hesrt,samples/GSE299631/GSM9042336,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042337,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4458,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Triple-negative breast cancer,MONDO:0005494,luna,,neoadjuvant chemotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.08831036850946,platform_constant,4.08831036850946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042337,,,train,hesrt,samples/GSE299631/GSM9042337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9042338,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4807,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Triple-negative breast cancer,MONDO:0005494,luna,,neoadjuvant chemotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.103527782749201,platform_constant,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042338,,,train,hesrt,samples/GSE299631/GSM9042338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9042339,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4243,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Triple-negative breast cancer,MONDO:0005494,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.103527782749201,platform_constant,4.103527782749201,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042339,,,train,hesrt,samples/GSE299631/GSM9042339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9042340,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1094,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Triple-negative breast cancer,MONDO:0005494,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.088310368509443,platform_constant,4.088310368509443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042340,,,train,hesrt,samples/GSE299631/GSM9042340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9042341,breast,disease,triple-negative breast carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4467,Spatiotemporal organisation of residual disease in mouse and human BRCA1-deficient mammary tumors and breast cancer,GSE299631,GSE299631,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,Triple-negative breast cancer,MONDO:0005494,luna,,neoadjuvant chemotherapy,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.702199993924956,platform_constant,3.702199993924956,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9042341,,,train,hesrt,samples/GSE299631/GSM9042341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9043133,skin,disease,keratosis,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4363,Spatial transcriptomic profiling of seborrhoeic keratoses,GSE299660,GSE299660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0006566,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,9.321511565839367,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42413572,,GSM9043133,,,train,sda-all,samples/GSE299660/GSM9043133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9043134,skin,disease,keratosis,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4546,Spatial transcriptomic profiling of seborrhoeic keratoses,GSE299660,GSE299660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0006566,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,10.11673721524642,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42413572,,GSM9043134,,,train,sda-all,samples/GSE299660/GSM9043134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9043135,skin,disease,keratosis,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4660,Spatial transcriptomic profiling of seborrhoeic keratoses,GSE299660,GSE299660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0006566,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,14.497126511060182,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42413572,,GSM9043135,,,train,sda-all,samples/GSE299660/GSM9043135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9043136,skin,disease,keratosis,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3808,Spatial transcriptomic profiling of seborrhoeic keratoses,GSE299660,GSE299660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0006566,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,8.045761447701388,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42413572,,GSM9043136,,,train,sda-all,samples/GSE299660/GSM9043136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.99, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9045881,heart,disease,acute disease,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3269,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0020683,mondo_predicate (Luna: perturbation),,intracoronary infusion of saline,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.781624464973892,platform_constant,4.781624464973892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045881,,,train,hesrt,samples/GSE299772/GSM9045881,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045882,heart,disease,acute disease,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3880,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0020683,mondo_predicate,,intracoronary infusion of saline,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.769565365247829,platform_constant,4.769565365247829,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045882,,,train,hesrt,samples/GSE299772/GSM9045882,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045883,heart,disease,acute myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,4465,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0004781,luna,,intracoronary infusion of iECM,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.6786233809077515,platform_constant,4.6786233809077515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045883,,,train,hesrt,samples/GSE299772/GSM9045883,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9045884,heart,disease,acute myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3553,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0004781,luna,,intracoronary infusion of iECM,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,5.114827085110209,platform_constant,5.114827085110209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045884,,,train,hesrt,samples/GSE299772/GSM9045884,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9045885,heart,disease,acute disease,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3787,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0020683,mondo_predicate,,intracoronary infusion of saline,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.515328489278397,platform_constant,4.515328489278397,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045885,,,train,hesrt,samples/GSE299772/GSM9045885,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045886,heart,normal,,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3685,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,,luna,,intracoronary infusion of saline,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,5.567004586422417,platform_constant,5.567004586422417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045886,,,train,hesrt,samples/GSE299772/GSM9045886,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045887,heart,disease,acute myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3709,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0004781,luna,,intracoronary infusion of iECM,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.345620488061208,platform_constant,4.345620488061208,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045887,,,train,hesrt,samples/GSE299772/GSM9045887,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045888,heart,disease,acute myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,4288,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0004781,luna,,intracoronary infusion of iECM,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.643672084569415,platform_constant,4.643672084569415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045888,,,train,hesrt,samples/GSE299772/GSM9045888,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9045889,heart,disease,acute disease,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3675,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0020683,mondo_predicate,,intracoronary infusion of saline,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.90064998699207,platform_constant,4.90064998699207,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045889,,,train,hesrt,samples/GSE299772/GSM9045889,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045890,heart,disease,acute disease,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3361,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0020683,mondo_predicate,,intracoronary infusion of saline,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.352241131362407,platform_constant,4.352241131362407,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045890,,,train,hesrt,samples/GSE299772/GSM9045890,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9045891,heart,disease,acute myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,4458,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0004781,luna,,intracoronary infusion of iECM,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.594929016580272,platform_constant,4.594929016580272,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045891,,,train,hesrt,samples/GSE299772/GSM9045891,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9045892,heart,disease,acute myocardial infarction,heart,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,4231,Infusible Extracellular Matrix Biomaterial Enhances and Expedites Cell-Specific Pro-Repair Following Acute Myocardial Infarction,GSE299772,GSE299772,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000948,cardiac,MONDO:0004781,luna,,intracoronary infusion of iECM,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25399,counts,pixel,4.892442211639357,platform_constant,4.892442211639357,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41292930;41414646,,GSM9045892,,,train,hesrt,samples/GSE299772/GSM9045892,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9045933,head and neck,disease,nasopharyngeal carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1570,Virus-Human Chromatin Interactions Reorganise 3D Genome and Hijack KDM5B for Promoting Metastasis in Nasopharyngeal Carcinoma [10X Visum Spatial Transcriptome],GSE299776,GSE299776,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,NPC biopsy,MONDO:0015459,luna,nasopharyngeal carcinoma,No treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.045093436322902,platform_constant,4.045093436322902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40759888,,GSM9045933,,,train,hesrt,samples/GSE299776/GSM9045933,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9046088,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,43565,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [CosMx],GSE299786,GSE299786,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41006245,,GSM9046088,,,train,sda-all,samples/GSE299786/GSM9046088,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046089,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,39123,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [CosMx],GSE299786,GSE299786,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9046089,,,train,sda-all,samples/GSE299786/GSM9046089,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9046090,lung,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,60395,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [CosMx],GSE299786,GSE299786,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,pleural mesothelioma,MONDO:0003308,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41006245,,GSM9046090,,,train,sda-all,samples/GSE299786/GSM9046090,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.30000000000000004, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9046091,lung,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,46955,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [CosMx],GSE299786,GSE299786,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,pleural mesothelioma,MONDO:0003308,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41006245,,GSM9046091,,,train,sda-all,samples/GSE299786/GSM9046091,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9046442,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,59825,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,GSE299810,GSE299810,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain hemisection,,luna,,WT mouse,luna,not stated,,not stated,,GSE299810:M_2,M_2,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.4999840153452686,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046442,,,train,sda-all,samples/GSE299810/GSM9046442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9046443,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,54056,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,GSE299810,GSE299810,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain hemisection,,luna,,WT mouse,luna,not stated,,not stated,,GSE299810:M_3,M_3,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000169287487773,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046443,,,train,sda-all,samples/GSE299810/GSM9046443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9046444,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,58693,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,GSE299810,GSE299810,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain hemisection,,luna,,WT mouse,luna,not stated,,not stated,,GSE299810:M_4,M_4,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000155048375092,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046444,,,train,sda-all,samples/GSE299810/GSM9046444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9046445,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55882,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,GSE299810,GSE299810,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain hemisection,,luna,,WT mouse,luna,not stated,,not stated,,GSE299810:M_5,M_5,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000009404860432,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046445,,,train,sda-all,samples/GSE299810/GSM9046445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9046446,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55651,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,GSE299810,GSE299810,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain hemisection,,luna,,WT mouse,luna,not stated,,not stated,,GSE299810:F_2,F_2,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000034441587069,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046446,,,train,sda-all,samples/GSE299810/GSM9046446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9046447,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,58778,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,GSE299810,GSE299810,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain hemisection,,luna,,WT mouse,luna,not stated,,not stated,,GSE299810:F_3,F_3,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000245249896736,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046447,,,train,sda-all,samples/GSE299810/GSM9046447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9046448,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,54624,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,GSE299810,GSE299810,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain hemisection,,luna,,WT mouse,luna,not stated,,not stated,,GSE299810:F_4,F_4,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.5000124120810923,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046448,,,train,sda-all,samples/GSE299810/GSM9046448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9046449,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,53017,Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle,GSE299810,GSE299810,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain hemisection,,luna,,WT mouse,luna,not stated,,not stated,,GSE299810:F_5,F_5,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,mBrain_50g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.4999780701754386,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41083138,,GSM9046449,,,train,sda-all,samples/GSE299810/GSM9046449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9046518,bone,normal,,tibia,primary tissue,Mus musculus,house mouse,embryonic,unknown,Visium HD,Visium HD,True,H&E,330212,Differential expression analysis in single cell and spatial RNASeq without model assumptions,GSE299816,GSE299816,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000979,tibia,,luna,,wild type,age rule: embryonic day,embryonic,18.5 embryonic days,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19070,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9046518,,,train,hesrt,samples/GSE299816/GSM9046518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9049384,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,165205,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [MERFISH],GSE299886,GSE299886,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,41006245,,GSM9049384,,,test,sda-all,samples/GSE299886/GSM9049384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9049385,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,205768,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [MERFISH],GSE299886,GSE299886,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,41006245,,GSM9049385,,,test,sda-all,samples/GSE299886/GSM9049385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9049386,other,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,153981,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [MERFISH],GSE299886,GSE299886,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,pleural mesothelioma,MONDO:0003308,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,41006245,,GSM9049386,,,test,sda-all,samples/GSE299886/GSM9049386,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9049686,brain,normal,,frontal cortex,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,False,,1922,Chronic periodontitis induces neurobehavioral deficits via microbiota–glia–endocrine interactions,GSE299911,GSE299911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001870,Frontal cortex,,luna,,Control,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,32589,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,,,GSM9049686,,,train,sda-all,samples/GSE299911/GSM9049686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9049687,brain,disease,chronic periodontitis,frontal cortex,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,False,,1936,Chronic periodontitis induces neurobehavioral deficits via microbiota–glia–endocrine interactions,GSE299911,GSE299911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001870,Frontal cortex,MONDO:0005593,mondo_predicate (Luna: perturbation),,Ligature-induced periodontitis,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,,,GSM9049687,,,train,sda-all,samples/GSE299911/GSM9049687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9051173,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4611,10X Visium Spatial transcriptomics of pancreatic caner patient tissue.,GSE299970,GSE299970,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic cancer tissue,MONDO:0009831,luna,pancreatic cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.494441424328192,platform_constant,5.494441424328192,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41722836,,GSM9051173,,,train,hesrt,samples/GSE299970/GSM9051173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9052317,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,136831,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],GSE300007,GSE300007,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052317,,,train,sda-all,samples/GSE300007/GSM9052317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9052318,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,117654,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],GSE300007,GSE300007,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052318,,,train,sda-all,samples/GSE300007/GSM9052318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9052319,other,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,145692,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],GSE300007,GSE300007,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052319,,,train,sda-all,samples/GSE300007/GSM9052319,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9052320,other,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,134530,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],GSE300007,GSE300007,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052320,,,train,sda-all,samples/GSE300007/GSM9052320,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9052321,lung,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,86150,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],GSE300007,GSE300007,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052321,,,train,sda-all,samples/GSE300007/GSM9052321,sda-tissue-disease-2.3,"{""organ"": 0.34, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.24, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9052322,other,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,72028,Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium],GSE300007,GSE300007,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,ABSENT,,,VERIFIED,,,,41006245,,GSM9052322,,,train,sda-all,samples/GSE300007/GSM9052322,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9052535,lung,disease,COVID-19,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E-like (heuristic),2196,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,GSE300023,GSE300023,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0100096,mondo_predicate,,Control,luna,not stated,,sample text,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,13.552991489582967,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052535,,,train,sda-all,samples/GSE300023/GSM9052535,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9052536,lung,disease,COVID-19,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E-like (heuristic),2334,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,GSE300023,GSE300023,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0100096,luna,,mAb pre-treatment,luna,not stated,,sample text,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,13.552515488600005,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052536,,,train,sda-all,samples/GSE300023/GSM9052536,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9052537,lung,disease,COVID-19,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E-like (heuristic),2445,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,GSE300023,GSE300023,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0100096,luna,,SARS-CoV-2 virus challenge,luna,not stated,,sample text,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,15.245612526168024,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052537,,,train,sda-all,samples/GSE300023/GSM9052537,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9052538,lung,disease,COVID-19,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E-like (heuristic),2225,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,GSE300023,GSE300023,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0100096,luna,,mAb pre-treatment & SARS-CoV-2 virus challenge,luna,not stated,,sample text,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,13.550725978414862,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052538,,,train,sda-all,samples/GSE300023/GSM9052538,sda-tissue-disease-2.4,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9052539,lung,disease,COVID-19,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E-like (heuristic),2237,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,GSE300023,GSE300023,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0100096,mondo_predicate,,Control,luna,not stated,,sample text,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,13.542627441460256,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052539,,,train,sda-all,samples/GSE300023/GSM9052539,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9052540,lung,disease,COVID-19,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E-like (heuristic),2245,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,GSE300023,GSE300023,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0100096,luna,,mAb pre-treatment,luna,not stated,,sample text,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,14.257446163582312,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052540,,,train,sda-all,samples/GSE300023/GSM9052540,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9052542,lung,disease,COVID-19,lung,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E-like (heuristic),2393,Multi-omics uncovers the immune landscape and molecular signatures associated with antibody-dependent cellular cytotoxicity in SARS-CoV-2 clearance,GSE300023,GSE300023,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0100096,luna,,mAb pre-treatment & SARS-CoV-2 virus challenge,luna,not stated,,sample text,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,14.272105748643595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9052542,,,train,sda-all,samples/GSE300023/GSM9052542,sda-tissue-disease-2.4,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9053839,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2966,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L1,age rule: bare number read as years,not stated,44,extracted field,female,GSE300112:P020,P020,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0537004333313345,platform_constant,4.0537004333313345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053839,,,train,hesrt,samples/GSE300112/GSM9053839,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9053840,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,697,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L1,age rule: bare number read as years,not stated,47,extracted field,female,GSE300112:P045,P045,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0537004333313345,platform_constant,4.0537004333313345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053840,,,train,hesrt,samples/GSE300112/GSM9053840,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9053841,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1692,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L1,age rule: bare number read as years,not stated,30,extracted field,female,GSE300112:P050,P050,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0537004333313345,platform_constant,4.0537004333313345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053841,,,train,hesrt,samples/GSE300112/GSM9053841,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9053842,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2387,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L1,age rule: bare number read as years,not stated,32,extracted field,female,GSE300112:P057,P057,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.0537004333313345,platform_constant,4.0537004333313345,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053842,,,train,hesrt,samples/GSE300112/GSM9053842,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9053843,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1379,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L3,age rule: bare number read as years,not stated,43,extracted field,female,GSE300112:P001,P001,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.185886509912579,platform_constant,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053843,,,train,hesrt,samples/GSE300112/GSM9053843,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9053844,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1988,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L3,age rule: bare number read as years,not stated,48,extracted field,female,GSE300112:P014,P014,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.185886509912564,platform_constant,4.185886509912564,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053844,,,train,hesrt,samples/GSE300112/GSM9053844,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9053845,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1808,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L3,age rule: bare number read as years,not stated,48,extracted field,female,GSE300112:P018,P018,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.185886509912559,platform_constant,4.185886509912559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053845,,,train,hesrt,samples/GSE300112/GSM9053845,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9053846,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1040,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L3,age rule: bare number read as years,not stated,32,extracted field,female,GSE300112:P087,P087,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.185886509912579,platform_constant,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053846,,,train,hesrt,samples/GSE300112/GSM9053846,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9053847,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1831,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L4,age rule: bare number read as years,not stated,43,extracted field,female,GSE300112:P021,P021,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.185886509912569,platform_constant,4.185886509912569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053847,,,train,hesrt,samples/GSE300112/GSM9053847,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9053848,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1167,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L4,age rule: bare number read as years,not stated,36,extracted field,female,GSE300112:P024,P024,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.185886509912579,platform_constant,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053848,,,train,hesrt,samples/GSE300112/GSM9053848,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9053849,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1005,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L4,age rule: bare number read as years,not stated,37,extracted field,female,GSE300112:P081,P081,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.185886509912579,platform_constant,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053849,,,train,hesrt,samples/GSE300112/GSM9053849,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9053850,uterus,normal,,ectocervix,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1283,The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa,GSE300112,GSE217237+GSE300112,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0012249,ectocervix,,luna,,L4,age rule: bare number read as years,not stated,25,extracted field,female,GSE300112:P117,P117,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.185886509912579,platform_constant,4.185886509912579,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41218071,,GSM9053850,,,train,hesrt,samples/GSE300112/GSM9053850,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9054471,head and neck,disease,head and neck squamous cell carcinoma,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,27775,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.4999914277876834,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054471,,,train,sda-all,samples/GSE300147/GSM9054471,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054472,head and neck,disease,head and neck squamous cell carcinoma,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,175174,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000092890760466,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054472,,,train,sda-all,samples/GSE300147/GSM9054472,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9054473,head and neck,disease,head and neck squamous cell carcinoma,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,268328,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000008611780916,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054473,,,train,sda-all,samples/GSE300147/GSM9054473,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054474,head and neck,disease,head and neck squamous cell carcinoma,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,63982,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.49998455942904196,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054474,,,train,sda-all,samples/GSE300147/GSM9054474,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054475,head and neck,disease,head and neck squamous cell carcinoma,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,43759,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.4999814936667215,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054475,,,train,sda-all,samples/GSE300147/GSM9054475,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054476,head and neck,disease,head and neck squamous cell carcinoma,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,34060,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000020549071181,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054476,,,train,sda-all,samples/GSE300147/GSM9054476,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054477,head and neck,disease,head and neck squamous cell carcinoma,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,29743,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999589827727645,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054477,,,train,sda-all,samples/GSE300147/GSM9054477,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054478,oral cavity,disease,head and neck squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,31707,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000147284081536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054478,,,train,sda-all,samples/GSE300147/GSM9054478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054479,oral cavity,disease,head and neck squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,62220,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998658022958126,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054479,,,train,sda-all,samples/GSE300147/GSM9054479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054480,oral cavity,disease,head and neck squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,86435,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998968753222645,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054480,,,train,sda-all,samples/GSE300147/GSM9054480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054481,airway,disease,head and neck squamous cell carcinoma,larynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,23496,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001737,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000164500740253,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054481,,,train,sda-all,samples/GSE300147/GSM9054481,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054482,airway,disease,head and neck squamous cell carcinoma,larynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,59995,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001737,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.49999613362202283,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054482,,,train,sda-all,samples/GSE300147/GSM9054482,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054483,head and neck,disease,head and neck squamous cell carcinoma,hypopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24109,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001051,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000041118421052,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054483,,,train,sda-all,samples/GSE300147/GSM9054483,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9054484,head and neck,disease,head and neck squamous cell carcinoma,hypopharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,37878,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001051,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000220874072329,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054484,,,train,sda-all,samples/GSE300147/GSM9054484,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054485,oral cavity,disease,head and neck squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,88466,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000176512120499,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054485,,,train,sda-all,samples/GSE300147/GSM9054485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054486,head and neck,disease,head and neck squamous cell carcinoma,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,39583,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.49999264532831256,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054486,,,train,sda-all,samples/GSE300147/GSM9054486,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054487,head and neck,disease,head and neck squamous cell carcinoma,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,51534,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000146370023419,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054487,,,train,sda-all,samples/GSE300147/GSM9054487,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9054488,oral cavity,disease,ameloblastoma;cancer,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38672,Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma,GSE300147,GSE300147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,,MONDO:0017795;MONDO:0004992,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.4999941141848146,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41961948,,GSM9054488,,,train,sda-all,samples/GSE300147/GSM9054488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9057740,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,822395,Early lineage divergence segregates sensory-related and motor-associative identities in the thalamus [Spatial Transcriptomics E17],GSE300289,GSE300289,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Thalamus,,luna,,ICR/CD-1,age rule: embryonic day,embryonic,Embryonic day 17.5,not stated,,,,,,release v3,sequencing-based,slide_seq,,,bead,32361,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9057740,,,train,sda-all,samples/GSE300289/GSM9057740,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9057760,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3277,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,NNK,age rule: age with unit,adult,11 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.324497375281349,platform_constant,4.324497375281349,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057760,,,train,hesrt,samples/GSE300293/GSM9057760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9057761,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2957,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,Saline,age rule: age with unit,adult,4 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.1972229795430795,platform_constant,4.1972229795430795,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057761,,,train,hesrt,samples/GSE300293/GSM9057761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9057762,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3262,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,Saline,age rule: age with unit,adult,4 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.21443390400474,platform_constant,4.21443390400474,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057762,,,train,hesrt,samples/GSE300293/GSM9057762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057763,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2477,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,Saline,age rule: age with unit,adult,4 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.369207408724802,platform_constant,4.369207408724802,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057763,,,train,hesrt,samples/GSE300293/GSM9057763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057764,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1772,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,Saline,age rule: age with unit,adult,4 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.1800119956465025,platform_constant,4.1800119956465025,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057764,,,train,hesrt,samples/GSE300293/GSM9057764,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057765,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2495,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,NNK,age rule: age with unit,adult,4 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.2488560101316395,platform_constant,4.2488560101316395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057765,,,train,hesrt,samples/GSE300293/GSM9057765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9057766,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1935,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,NNK,age rule: age with unit,adult,4 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.2488560101316395,platform_constant,4.2488560101316395,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057766,,,train,hesrt,samples/GSE300293/GSM9057766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9057767,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2908,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,NNK,age rule: age with unit,adult,4 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.094082424778427,platform_constant,4.094082424778427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057767,,,train,hesrt,samples/GSE300293/GSM9057767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9057768,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3195,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,NNK,age rule: age with unit,adult,4 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.042449544515902,platform_constant,4.042449544515902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057768,,,train,hesrt,samples/GSE300293/GSM9057768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057769,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3658,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,Saline,age rule: age with unit,adult,11 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.2198359418017795,platform_constant,4.2198359418017795,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057769,,,train,hesrt,samples/GSE300293/GSM9057769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057770,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1884,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,Saline,age rule: age with unit,adult,11 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.25463458565372,platform_constant,4.25463458565372,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057770,,,train,hesrt,samples/GSE300293/GSM9057770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9057771,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2705,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,Saline,age rule: age with unit,adult,11 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.115187963412145,platform_constant,4.115187963412145,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057771,,,train,hesrt,samples/GSE300293/GSM9057771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057772,lung,disease,lung adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3137,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,mondo_predicate (Luna: perturbation),,Saline,age rule: age with unit,adult,11 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,3.9932030148361006,platform_constant,3.9932030148361006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057772,,,train,hesrt,samples/GSE300293/GSM9057772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057773,lung,disease,carcinoma;glandular cell neoplasm,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,7687,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004993;MONDO:0024276,luna,,Control IgG,age rule: age with unit,adult,7 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.562644338997641,platform_constant,5.562644338997641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057773,,,train,hesrt,samples/GSE300293/GSM9057773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.47000000000000003, ""uberon"": 0.89, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057774,lung,disease,adenocarcinoma;non-small cell lung carcinoma,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,8667,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004970;MONDO:0005233,luna,,anti-IL-1β,age rule: age with unit,adult,7 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.597139866554024,platform_constant,5.597139866554024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057774,,,train,hesrt,samples/GSE300293/GSM9057774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.4, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057775,lung,disease,non-small cell lung carcinoma;glandular cell neoplasm,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,11169,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005233;MONDO:0024276,mondo_predicate (Luna: perturbation),,anti-IL-1β,age rule: age with unit,adult,11 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.267316685923242,platform_constant,6.267316685923242,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057775,,,train,hesrt,samples/GSE300293/GSM9057775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.4, ""uberon"": 0.81, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057776,lung,disease,lung adenocarcinoma,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,9131,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005061,luna,,Control IgG,age rule: age with unit,adult,11 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.018757890199108,platform_constant,6.018757890199108,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057776,,,train,hesrt,samples/GSE300293/GSM9057776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.55, ""uberon"": 0.75, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9057777,lung,disease,carcinoma;glandular cell neoplasm,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,7366,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0004993;MONDO:0024276,mondo_predicate (Luna: perturbation),,anti-IL-1β,age rule: age with unit,adult,7 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,6.500812572972461,platform_constant,6.500812572972461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057777,,,train,hesrt,samples/GSE300293/GSM9057777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.32, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9057778,lung,disease,non-small cell lung carcinoma;glandular cell neoplasm,lung,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,8218,"Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockade in precancerous phase [Spatial transcriptomics]",GSE300293,GSE300293,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005233;MONDO:0024276,luna,,anti-IL-1β,age rule: age with unit,adult,11 months,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,5.650546595929875,platform_constant,5.650546595929875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9057778,,,train,hesrt,samples/GSE300293/GSM9057778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.39, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9058063,other,normal,,tarsal region,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,64923,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],GSE300303,GSE300303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004454,ankle,,luna,,mock infected mice,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.500006899406651,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058063,,,train,sda-all,samples/GSE300303/GSM9058063,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9058064,other,disease,vector-borne disease,tarsal region,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,63172,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],GSE300303,GSE300303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004454,ankle,MONDO:0100120,mondo_predicate,,mock infected mice,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499988506803972,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058064,,,train,sda-all,samples/GSE300303/GSM9058064,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9058065,other,normal,,tarsal region,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,60934,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],GSE300303,GSE300303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004454,ankle,,luna,,mock infected mice,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000059910243562,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058065,,,train,sda-all,samples/GSE300303/GSM9058065,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9058066,other,disease,chikungunya,tarsal region,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,82029,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],GSE300303,GSE300303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004454,ankle,MONDO:0017941,luna,,CHIKV infected mice,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000054763179672,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058066,,,train,sda-all,samples/GSE300303/GSM9058066,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9058067,other,disease,chikungunya,tarsal region,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,79359,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],GSE300303,GSE300303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004454,ankle,MONDO:0017941,luna,,CHIKV infected mice,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.5000086210860268,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058067,,,train,sda-all,samples/GSE300303/GSM9058067,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9058068,other,disease,chikungunya,tarsal region,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,87457,Chikungunya virus persists in joint associated macrophages and promotes chronic disease [Xenium],GSE300303,GSE300303,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004454,ankle,MONDO:0017941,luna,,CHIKV infected mice,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000091276409308,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41922840,,GSM9058068,,,train,sda-all,samples/GSE300303/GSM9058068,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9059352,skin,disease,Kaposi's sarcoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2105,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,GSE300380,GSE300380,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous KS tumor,MONDO:0005055,luna,Kaposi sarcoma,cutaneous KS tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18066,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059352,,,val,hesrt,samples/GSE300380/GSM9059352,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9059353,skin,disease,Kaposi's sarcoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1926,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,GSE300380,GSE300380,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous KS tumor,MONDO:0005055,luna,Kaposi sarcoma,cutaneous KS tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18066,counts,pixel,4.856429311786321,platform_constant,4.856429311786321,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059353,,,val,hesrt,samples/GSE300380/GSM9059353,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9059354,skin,disease,Kaposi's sarcoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1332,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,GSE300380,GSE300380,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous KS tumor,MONDO:0005055,luna,Kaposi sarcoma,cutaneous KS tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18066,counts,pixel,4.740454631399772,platform_constant,4.740454631399772,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059354,,,val,hesrt,samples/GSE300380/GSM9059354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9059355,skin,disease,Kaposi's sarcoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1566,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,GSE300380,GSE300380,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous KS tumor,MONDO:0005055,luna,Kaposi sarcoma,cutaneous KS tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18066,counts,pixel,4.761904761904762,platform_constant,4.761904761904762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059355,,,val,hesrt,samples/GSE300380/GSM9059355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9059356,skin,disease,Kaposi's sarcoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1293,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,GSE300380,GSE300380,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous KS tumor,MONDO:0005055,luna,Kaposi sarcoma,cutaneous KS tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,0.3076908511710158,platform_constant,0.5000106371052493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059356,,,val,hesrt,samples/GSE300380/GSM9059356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9059357,skin,disease,Kaposi's sarcoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,989,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,GSE300380,GSE300380,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous KS tumor,MONDO:0005055,luna,Kaposi sarcoma,cutaneous KS tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,0.3086360952378595,platform_constant,0.49999706277565265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059357,,,val,hesrt,samples/GSE300380/GSM9059357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9059358,skin,disease,Kaposi's sarcoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1089,Spatial Transcriptomics of Patients with Kaposi Sarcoma Identifies Mechanisms of Immune Evasion,GSE300380,GSE300380,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,cutaneous KS tumor,MONDO:0005055,luna,Kaposi sarcoma,cutaneous KS tumor,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36945,counts,pixel,0.3076908511710158,platform_constant,0.5000106371052493,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41342328,,GSM9059358,,,val,hesrt,samples/GSE300380/GSM9059358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9060605,brain,disease,,somatosensory cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,"fluorescence: single channel, grayscale (heuristic)",234275,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,GSE300434,GSE300434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0008930,Somatosensory cortex,,luna,,AQP4-IgG injection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,19040,counts,um,1.0,verified,0.62351823392168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42493549,,GSM9060605,,,train,sda-all,samples/GSE300434/GSM9060605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9060606,brain,perturbation,,somatosensory cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,"fluorescence: single channel, grayscale (heuristic)",371062,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,GSE300434,GSE300434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0008930,Somatosensory cortex,,luna,,AQP4-IgG injection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,19040,counts,um,1.0,verified,0.6240029316095352,VERIFIED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42493549,,GSM9060606,,,train,sda-all,samples/GSE300434/GSM9060606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9060607,brain,disease,,somatosensory cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,"fluorescence: single channel, grayscale (heuristic)",427132,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,GSE300434,GSE300434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0008930,Somatosensory cortex,,luna,,AQP4-IgG injection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,19040,counts,um,1.0,verified,0.6239602028320056,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42493549,,GSM9060607,,,train,sda-all,samples/GSE300434/GSM9060607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9060608,brain,disease,,somatosensory cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,"fluorescence: single channel, grayscale (heuristic)",470110,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,GSE300434,GSE300434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0008930,Somatosensory cortex,,luna,,AQP4-IgG injection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,19040,counts,um,1.0,verified,0.6236431497900552,VERIFIED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42493549,,GSM9060608,,,train,sda-all,samples/GSE300434/GSM9060608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9060609,brain,disease,,somatosensory cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,False,,416799,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,GSE300434,GSE300434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0008930,Somatosensory cortex,,luna,,AQP4-IgG injection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,19040,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42493549,,GSM9060609,,,train,sda-all,samples/GSE300434/GSM9060609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9060610,brain,disease,,somatosensory cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,False,,293192,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,GSE300434,GSE300434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0008930,Somatosensory cortex,,luna,,AQP4-IgG injection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,19040,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42493549,,GSM9060610,,,train,sda-all,samples/GSE300434/GSM9060610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9060611,brain,disease,,somatosensory cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,"fluorescence: single channel, grayscale (heuristic)",320894,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,GSE300434,GSE300434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0008930,Somatosensory cortex,,luna,,AQP4-IgG injection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,19040,counts,um,1.0,verified,0.6238847734231852,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42493549,,GSM9060611,,,train,sda-all,samples/GSE300434/GSM9060611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9060612,brain,disease,,somatosensory cortex,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,"fluorescence: single channel, grayscale (heuristic)",341313,Migratory astrocyte subset drives CNS regeneration after astrocyte loss,GSE300434,GSE300434,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0008930,Somatosensory cortex,,luna,,AQP4-IgG injection,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,19040,counts,um,1.0,verified,0.6239801340600175,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42493549,,GSM9060612,,,train,sda-all,samples/GSE300434/GSM9060612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9060732,skin,disease,cutaneous melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2539,Spatial tumour-immune ecosystems shape the efficacy of anti-PD1 immunotherapy in primary cutaneous melanoma [Spatial Transcriptomics],GSE300445,GSE300445,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Cutaneous melanoma,MONDO:0005012,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.560673621784541,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42315253,,GSM9060732,,,train,sda-all,samples/GSE300445/GSM9060732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9060733,skin,disease,cutaneous melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2783,Spatial tumour-immune ecosystems shape the efficacy of anti-PD1 immunotherapy in primary cutaneous melanoma [Spatial Transcriptomics],GSE300445,GSE300445,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Cutaneous melanoma,MONDO:0005012,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.378393762196788,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42315253,,GSM9060733,,,train,sda-all,samples/GSE300445/GSM9060733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9060734,skin,disease,cutaneous melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2145,Spatial tumour-immune ecosystems shape the efficacy of anti-PD1 immunotherapy in primary cutaneous melanoma [Spatial Transcriptomics],GSE300445,GSE300445,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Cutaneous melanoma,MONDO:0005012,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.91195569305303,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42315253,,GSM9060734,,,train,sda-all,samples/GSE300445/GSM9060734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9060735,skin,disease,cutaneous melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4115,Spatial tumour-immune ecosystems shape the efficacy of anti-PD1 immunotherapy in primary cutaneous melanoma [Spatial Transcriptomics],GSE300445,GSE300445,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Cutaneous melanoma,MONDO:0005012,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.520831632739603,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42315253,,GSM9060735,,,train,sda-all,samples/GSE300445/GSM9060735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.45, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9064848,heart,disease,heart failure,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Thor: a platform for cell-level investigation of spatial transcriptomics and histology [Heart Failure],GSE300585,GSE300585,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0005252,luna,Congestive Heart Failure,Heart failure,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.3995974086160109,platform_constant,0.5000080419381966,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40764306,,GSM9064848,,,train,hesrt,samples/GSE300585/GSM9064848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9065344,other,disease,neoplasm,,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1415,Spatial transcriptomics dataset of primary tumours from MDA-MB-231 xenograft model,GSE300613,GSE300613,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Primary tumour,MONDO:0005070,luna,,xenograft,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,64591,counts,pixel,4.538274221323131,platform_constant,4.538274221323131,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40552975,10.1158/2159-8290.cd-24-0684,GSM9065344,,,test,hesrt,samples/GSE300613/GSM9065344,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.74, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9065345,other,disease,neoplasm,,xenograft,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1570,Spatial transcriptomics dataset of primary tumours from MDA-MB-231 xenograft model,GSE300613,GSE300613,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Primary tumour,MONDO:0005070,luna,,xenograft,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,64591,counts,pixel,4.538274221323131,platform_constant,4.538274221323131,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40552975,10.1158/2159-8290.cd-24-0684,GSM9065345,,,test,hesrt,samples/GSE300613/GSM9065345,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9065766,brain,disease,cerebral cortical dysplasia,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4409,Dysmorphic neurons express markers of inhibitory glycinergic signaling in focal cortical dysplasia,GSE300645,GSE300645,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0017094,luna,focal cortical dysplasia,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,13.97142812769599,platform_constant,13.97142812769599,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40957662,,GSM9065766,,,train,hesrt,samples/GSE300645/GSM9065766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9065767,brain,disease,cerebral cortical dysplasia,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4971,Dysmorphic neurons express markers of inhibitory glycinergic signaling in focal cortical dysplasia,GSE300645,GSE300645,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0017094,luna,focal cortical dysplasia,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,12.17678519768559,platform_constant,12.17678519768559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40957662,,GSM9065767,,,train,hesrt,samples/GSE300645/GSM9065767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9065768,brain,disease,cerebral cortical dysplasia,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4684,Dysmorphic neurons express markers of inhibitory glycinergic signaling in focal cortical dysplasia,GSE300645,GSE300645,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0017094,luna,focal cortical dysplasia,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,13.946643291943008,platform_constant,13.946643291943008,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40957662,,GSM9065768,,,train,hesrt,samples/GSE300645/GSM9065768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9065769,brain,disease,cerebral cortical dysplasia,brain,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4731,Dysmorphic neurons express markers of inhibitory glycinergic signaling in focal cortical dysplasia,GSE300645,GSE300645,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain,MONDO:0017094,luna,focal cortical dysplasia,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,13.062076056406552,platform_constant,13.062076056406552,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40957662,,GSM9065769,,,train,hesrt,samples/GSE300645/GSM9065769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9066288,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4639,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,GSE300676,GSE300676,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.710904832399855,platform_constant,4.710904832399855,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066288,,,train,hesrt,samples/GSE300676/GSM9066288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066289,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3981,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,GSE300676,GSE300676,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.795744544157061,platform_constant,4.795744544157061,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066289,,,train,hesrt,samples/GSE300676/GSM9066289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066290,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3878,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,GSE300676,GSE300676,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.761953291013262,platform_constant,4.761953291013262,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066290,,,train,hesrt,samples/GSE300676/GSM9066290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066291,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3508,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,GSE300676,GSE300676,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.7980916883874976,platform_constant,4.7980916883874976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066291,,,train,hesrt,samples/GSE300676/GSM9066291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066292,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4532,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,GSE300676,GSE300676,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.6766214002573125,platform_constant,4.6766214002573125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066292,,,train,hesrt,samples/GSE300676/GSM9066292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066293,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4463,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,GSE300676,GSE300676,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.724179663161129,platform_constant,4.724179663161129,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066293,,,train,hesrt,samples/GSE300676/GSM9066293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066294,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4729,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,GSE300676,GSE300676,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.7619845044983125,platform_constant,4.7619845044983125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41040912,,GSM9066294,,,train,hesrt,samples/GSE300676/GSM9066294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066295,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3897,Identification of key molecules promoting lepidic–filigree micropapillary–conventional/overt micropapillary progression in lung adenocarcinoma: A comprehensive gene expression analysis study using the spatial gene expression solution methodology,GSE300676,GSE300676,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,FAIL,,,41040912,,GSM9066295,,,train,sda-all,samples/GSE300676/GSM9066295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9066380,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),400147,Thor: a platform for cell-level investigation of spatial transcriptomics and histology [Bladder Cancer],GSE300692,GSE300692,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,5.5913544233599985,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40764306,,GSM9066380,,,train,sda-all,samples/GSE300692/GSM9066380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9293137,kidney,disease,chronic kidney disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,4264,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,GSE300851,GSE300851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Kidney,MONDO:0005300,luna,Chronic kidney disease,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17923,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9293137,,,train,sda-all,samples/GSE300851/GSM9293137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9293138,kidney,disease,chronic kidney disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,4505,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,GSE300851,GSE300851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Kidney,MONDO:0005300,luna,Chronic kidney disease,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17945,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9293138,,,train,sda-all,samples/GSE300851/GSM9293138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9293139,kidney,disease,chronic kidney disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,4928,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,GSE300851,GSE300851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Kidney,MONDO:0005300,luna,Chronic kidney disease,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17925,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9293139,,,train,sda-all,samples/GSE300851/GSM9293139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9293140,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3688,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,GSE300851,GSE300851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,Kidney,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17926,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9293140,,,train,sda-all,samples/GSE300851/GSM9293140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9293141,lung,disease,lung disorder,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,4042,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,GSE300851,GSE300851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0005275,luna,Chronic lung disease,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17933,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9293141,,,train,sda-all,samples/GSE300851/GSM9293141,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9293142,lung,disease,lung disorder,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,4505,DGAT: A Dual-Graph Attention Network for Inferring Spatial Protein Landscapes from Transcriptomics,GSE300851,GSE300851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0005275,luna,Chronic lung disease,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17962,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9293142,,,train,sda-all,samples/GSE300851/GSM9293142,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9071194,kidney,disease,idiopathic nephrotic syndrome,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,865888,High resolution spatial trancrioptomics combined with deep learning-based image segmentation enables single-cell spatial profiling of archival FFPE kidney tissue from patients with idiopathic nephrotic syndrome,GSE300895,GSE300895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney,MONDO:0018170,luna,idiopathic nephrotic syndrome,SSNS,luna,not stated,,not stated,,GSE300895:Patient1,Patient1,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,zero_count_observations,human_visual_review,,,,,,GSM9071194,,,train,hesrt,samples/GSE300895/GSM9071194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9071195,kidney,disease,idiopathic nephrotic syndrome,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,908128,High resolution spatial trancrioptomics combined with deep learning-based image segmentation enables single-cell spatial profiling of archival FFPE kidney tissue from patients with idiopathic nephrotic syndrome,GSE300895,GSE300895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney,MONDO:0018170,luna,idiopathic nephrotic syndrome,FSGS,luna,not stated,,not stated,,GSE300895:Patient2,Patient2,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,zero_count_observations,human_visual_review,,,,,,GSM9071195,,,train,hesrt,samples/GSE300895/GSM9071195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9071196,kidney,disease,idiopathic nephrotic syndrome,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,1936880,High resolution spatial trancrioptomics combined with deep learning-based image segmentation enables single-cell spatial profiling of archival FFPE kidney tissue from patients with idiopathic nephrotic syndrome,GSE300895,GSE300895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney,MONDO:0018170,luna,idiopathic nephrotic syndrome,FR/SDNS,luna,not stated,,not stated,,GSE300895:Patient3,Patient3,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,zero_count_observations,human_visual_review,,,,,,GSM9071196,,,train,hesrt,samples/GSE300895/GSM9071196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9073648,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3231,Spatial transcriptomic profiling uncovers the molecular effects of the neurotoxicant polychlorinated biphenyls (PCBs) in the brains of adult mice,GSE301012,GSE301012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,PCB,luna,not stated,adult,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.5459349747184589,platform_constant,0.5459349747184589,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41620578,,GSM9073648,,,train,hesrt,samples/GSE301012/GSM9073648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9073649,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2970,Spatial transcriptomic profiling uncovers the molecular effects of the neurotoxicant polychlorinated biphenyls (PCBs) in the brains of adult mice,GSE301012,GSE301012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,PCB,luna,adult,adult,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.5460486774274447,platform_constant,0.5460486774274447,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41620578,,GSM9073649,,,train,hesrt,samples/GSE301012/GSM9073649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9073650,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2708,Spatial transcriptomic profiling uncovers the molecular effects of the neurotoxicant polychlorinated biphenyls (PCBs) in the brains of adult mice,GSE301012,GSE301012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Vehicle,luna,not stated,adult,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.5464604950717884,platform_constant,0.5464604950717884,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41620578,,GSM9073650,,,train,hesrt,samples/GSE301012/GSM9073650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",disease_status,low_confidence_annotation
GSM9073651,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3330,Spatial transcriptomic profiling uncovers the molecular effects of the neurotoxicant polychlorinated biphenyls (PCBs) in the brains of adult mice,GSE301012,GSE301012,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Vehicle,luna,adult,adult,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.5464808872971496,platform_constant,0.5464808872971496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41620578,,GSM9073651,,,train,hesrt,samples/GSE301012/GSM9073651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.49}",disease_status;life_stage,low_confidence_annotation
GSM9078930,brain,disease,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3470,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,status epilepticus,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.95178852535466,platform_constant,3.95178852535466,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078930,,,train,hesrt,samples/GSE301260/GSM9078930,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9078931,brain,disease,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,2860,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,status epilepticus,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.942790878283373,platform_constant,3.942790878283373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078931,,,train,hesrt,samples/GSE301260/GSM9078931,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.8}",,
GSM9078932,brain,disease,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,2889,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,status epilepticus,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.9409912747590097,platform_constant,3.9409912747590097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078932,,,train,hesrt,samples/GSE301260/GSM9078932,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9078933,brain,disease,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3205,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,status epilepticus,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.95358805997216,platform_constant,3.95358805997216,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078933,,,train,hesrt,samples/GSE301260/GSM9078933,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9078934,brain,normal,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3405,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.946389871041147,platform_constant,3.946389871041147,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078934,,,train,hesrt,samples/GSE301260/GSM9078934,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM9078935,brain,normal,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3184,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.9517885253546563,platform_constant,3.9517885253546563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078935,,,train,hesrt,samples/GSE301260/GSM9078935,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM9078936,brain,normal,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,2658,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.9553875824027167,platform_constant,3.9553875824027167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078936,,,train,hesrt,samples/GSE301260/GSM9078936,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9078937,brain,normal,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3268,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.951788525354653,platform_constant,3.951788525354653,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078937,,,train,hesrt,samples/GSE301260/GSM9078937,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM9078938,brain,disease,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3480,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,status epilepticus,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.939191718031696,platform_constant,3.939191718031696,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078938,,,train,hesrt,samples/GSE301260/GSM9078938,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9078939,brain,disease,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,2907,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,status epilepticus,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.9553875824027167,platform_constant,3.9553875824027167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078939,,,train,hesrt,samples/GSE301260/GSM9078939,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM9078940,brain,disease,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3583,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,status epilepticus,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.942790878283373,platform_constant,3.942790878283373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078940,,,train,hesrt,samples/GSE301260/GSM9078940,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9078941,brain,disease,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,2901,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,status epilepticus,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.9445902670833277,platform_constant,3.9445902670833277,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078941,,,train,hesrt,samples/GSE301260/GSM9078941,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9078942,brain,normal,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3027,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.937392080997424,platform_constant,3.937392080997424,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078942,,,train,hesrt,samples/GSE301260/GSM9078942,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.28}",disease_status;life_stage,low_confidence_annotation
GSM9078943,brain,normal,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3484,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.9373920809974257,platform_constant,3.9373920809974257,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078943,,,train,hesrt,samples/GSE301260/GSM9078943,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.98, ""life_stage"": 0.38}",disease_status;life_stage,low_confidence_annotation
GSM9078944,brain,normal,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3162,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.942790878283373,platform_constant,3.942790878283373,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078944,,,train,hesrt,samples/GSE301260/GSM9078944,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM9078945,brain,normal,,brain,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,3098,Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte subtype shifts in epileptogenesis beyond the hippocampus,GSE301260,GSE301260,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,35236,counts,pixel,3.9463898710411485,platform_constant,3.9463898710411485,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41540500,,GSM9078945,,,train,hesrt,samples/GSE301260/GSM9078945,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.34}",disease_status;life_stage,low_confidence_annotation
GSM9078977,small intestine,disease,neuroendocrine neoplasm,small intestine,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,979,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,GSE301265,GSE301265,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small intestinal neuroendocrine tumor,MONDO:0019496,luna,Small intestinal neuroendocrine tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.17327567468889,platform_constant,4.17327567468889,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078977,,,train,hesrt,samples/GSE301265/GSM9078977,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9078978,small intestine,disease,neuroendocrine neoplasm,small intestine,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,972,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,GSE301265,GSE301265,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small intestinal neuroendocrine tumor,MONDO:0019496,luna,Small intestinal neuroendocrine tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.166379339259518,platform_constant,4.166379339259518,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078978,,,train,hesrt,samples/GSE301265/GSM9078978,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9078979,small intestine,disease,neuroendocrine neoplasm,small intestine,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1177,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,GSE301265,GSE301265,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small intestinal neuroendocrine tumor,MONDO:0019496,luna,Small intestinal neuroendocrine tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.225431196084384,platform_constant,4.225431196084384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078979,,,train,hesrt,samples/GSE301265/GSM9078979,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9078980,small intestine,disease,neuroendocrine neoplasm,small intestine,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1120,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,GSE301265,GSE301265,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small intestinal neuroendocrine tumor,MONDO:0019496,luna,Small intestinal neuroendocrine tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.231034301162641,platform_constant,4.231034301162641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078980,,,train,hesrt,samples/GSE301265/GSM9078980,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9078981,small intestine,disease,neuroendocrine neoplasm,small intestine,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1110,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,GSE301265,GSE301265,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small intestinal neuroendocrine tumor,MONDO:0019496,luna,Small intestinal neuroendocrine tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.23240916155043,platform_constant,4.23240916155043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078981,,,train,hesrt,samples/GSE301265/GSM9078981,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9078982,small intestine,disease,neuroendocrine neoplasm,small intestine,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1099,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,GSE301265,GSE301265,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small intestinal neuroendocrine tumor,MONDO:0019496,luna,Small intestinal neuroendocrine tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.167308539584607,platform_constant,4.167308539584607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078982,,,train,hesrt,samples/GSE301265/GSM9078982,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9078983,small intestine,disease,neuroendocrine neoplasm,small intestine,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1015,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,GSE301265,GSE301265,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small intestinal neuroendocrine tumor,MONDO:0019496,luna,Small intestinal neuroendocrine tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.234051662384297,platform_constant,4.234051662384297,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078983,,,train,hesrt,samples/GSE301265/GSM9078983,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9078984,small intestine,disease,neuroendocrine neoplasm,small intestine,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,823,Spatial Transcriptomics Reveals Local Subtype-Specific Identity and Signaling within Multifocal Small Intestinal Neuroendocrine Tumors,GSE301265,GSE301265,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,Small intestinal neuroendocrine tumor,MONDO:0019496,luna,Small intestinal neuroendocrine tumor,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.233702579004229,platform_constant,4.233702579004229,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41779010,10.1158/1078-0432.ccr-25-2854,GSM9078984,,,train,hesrt,samples/GSE301265/GSM9078984,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9079610,skin,normal,,skin of body,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,9960,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Skin,,luna,Healthy,,age rule: bare number read as years,adult,47,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49996721311475406,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079610,,,train,sda-all,samples/GSE301280/GSM9079610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079611,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,6800,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Non-lesional,,age rule: bare number read as years,adult,24,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000353107344632,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079611,,,train,sda-all,samples/GSE301280/GSM9079611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079612,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,5914,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Non-lesional,,age rule: bare number read as years,adult,32,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999388154674507,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079612,,,train,sda-all,samples/GSE301280/GSM9079612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079613,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,10079,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Healthy,,age rule: bare number read as years,adult,27,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997730482146463,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079613,,,train,sda-all,samples/GSE301280/GSM9079613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079614,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,10662,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Healthy,,age rule: bare number read as years,adult,27,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000309363398872,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079614,,,train,sda-all,samples/GSE301280/GSM9079614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079615,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,11535,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Healthy,,age rule: bare number read as years,adult,48,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999725010312113,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079615,,,train,sda-all,samples/GSE301280/GSM9079615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079616,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,11195,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Non-lesional,,age rule: bare number read as years,adult,21,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000389535837297,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9079616,,,train,sda-all,samples/GSE301280/GSM9079616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079617,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,22048,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,Comedo,,age rule: bare number read as years,adult,21,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997603068072866,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9079617,,,train,sda-all,samples/GSE301280/GSM9079617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9079618,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,19931,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,Comedo,,age rule: bare number read as years,adult,21,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000272851296044,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9079618,,,train,sda-all,samples/GSE301280/GSM9079618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079619,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,22670,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,Comedo,,age rule: bare number read as years,adult,21,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000061194516972,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9079619,,,train,sda-all,samples/GSE301280/GSM9079619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079620,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,42558,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,Pustule,,age rule: bare number read as years,adult,18,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000143466141991,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079620,,,train,sda-all,samples/GSE301280/GSM9079620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.45, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM9079621,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,19271,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Non-lesional,,age rule: bare number read as years,adult,18,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500001691017316,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079621,,,train,sda-all,samples/GSE301280/GSM9079621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.41000000000000003, ""life_stage"": 0.97}",disease_status;uberon,low_confidence_annotation
GSM9079622,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,17841,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Non-lesional,,age rule: bare number read as years,adult,18,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000353107344632,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079622,,,train,sda-all,samples/GSE301280/GSM9079622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079623,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,20595,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,Pustule,,age rule: bare number read as years,adult,19,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000102171882297,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079623,,,train,sda-all,samples/GSE301280/GSM9079623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 0.99}",,
GSM9079624,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,11718,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Non-lesional,,age rule: bare number read as years,adult,19,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000285527818567,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079624,,,train,sda-all,samples/GSE301280/GSM9079624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.42, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9079625,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,11937,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,Comedo,,age rule: bare number read as years,adult,21,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49996144480519483,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079625,,,train,sda-all,samples/GSE301280/GSM9079625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079626,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,10314,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,Comedo,,age rule: bare number read as years,adult,21,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999565972222222,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079626,,,train,sda-all,samples/GSE301280/GSM9079626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079627,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,11011,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,Comedo,,age rule: bare number read as years,adult,21,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000226523887973,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079627,,,train,sda-all,samples/GSE301280/GSM9079627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9079628,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,7106,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Non-lesional,,age rule: bare number read as years,adult,21,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000025370407957,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079628,,,train,sda-all,samples/GSE301280/GSM9079628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079629,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,False,,10450,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,Comedo,,age rule: bare number read as years,adult,33,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079629,,,train,sda-all,samples/GSE301280/GSM9079629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9079630,skin,disease,acne,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,32861,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0011438,luna,Pustule,,age rule: bare number read as years,adult,33,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000058788947678,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9079630,,,train,sda-all,samples/GSE301280/GSM9079630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9079631,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,6679,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Non-lesional,,age rule: bare number read as years,adult,33,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000114807633432,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079631,,,train,sda-all,samples/GSE301280/GSM9079631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM9079632,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,7378,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Non-lesional,,age rule: bare number read as years,adult,33,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000219891745602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079632,,,train,sda-all,samples/GSE301280/GSM9079632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9079633,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,5384,Spatial transcriptomics reveals dysfunctional lipid metabolism and abnormal pilosebaceous differentiation in acne vulgaris,GSE301280,GSE301280,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,Healthy,,age rule: bare number read as years,adult,49,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000226523887973,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9079633,,,train,sda-all,samples/GSE301280/GSM9079633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9080376,placenta,normal,,decidua basalis,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),871,Spatial transcriptomics of the human first trimester decidua,GSE301306,GSE301306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0000453,Decidua,,luna,,invaded,luna,not stated,,not stated,,GSE301306:Donor 1,Donor 1,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.679709024114317,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42248577,,GSM9080376,,,train,sda-all,samples/GSE301306/GSM9080376,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM9080377,placenta,normal,,decidua parietalis,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1482,Spatial transcriptomics of the human first trimester decidua,GSE301306,GSE301306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0006878,Decidua,,luna,,non-invaded,luna,not stated,,not stated,,GSE301306:Donor 1,Donor 1,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.673981267036336,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42248577,,GSM9080377,,,train,sda-all,samples/GSE301306/GSM9080377,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9080378,placenta,normal,,decidua basalis,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1800,Spatial transcriptomics of the human first trimester decidua,GSE301306,GSE301306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0000453,Decidua,,luna,,invaded,luna,not stated,,not stated,,GSE301306:Donor 2,Donor 2,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.679894868445689,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42248577,,GSM9080378,,,train,sda-all,samples/GSE301306/GSM9080378,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9080379,placenta,normal,,decidua parietalis,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1973,Spatial transcriptomics of the human first trimester decidua,GSE301306,GSE301306,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0006878,Decidua,,luna,,non-invaded,luna,not stated,,not stated,,GSE301306:Donor 2,Donor 2,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.673780457051397,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42248577,,GSM9080379,,,train,sda-all,samples/GSE301306/GSM9080379,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9083240,brain,perturbation,,parabrachial nucleus,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,207814,A parabrachial hub for the prioritization of survival behavior during pain,GSE301435,GSE301435,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0007634,Coronal Mouse Brain section ~-5.2mm from Bregma,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,CosMx,,,cell,1201,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41062698,,GSM9083240,,,train,sda-all,samples/GSE301435/GSM9083240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9083241,brain,perturbation,,parabrachial nucleus,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,186550,A parabrachial hub for the prioritization of survival behavior during pain,GSE301435,GSE301435,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0007634,Coronal Mouse Brain section ~-5.2mm from Bregma,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,CosMx,,,cell,1201,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41062698,,GSM9083241,,,train,sda-all,samples/GSE301435/GSM9083241,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9083960,skin,disease,erythrokeratoderma,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,80924,Spatial transcriptomics data of EMP2-progressive symmetric erythrokeratoderma,GSE301486,GSE301486,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0019270,luna,progressive symmetric erythrokeratoderma,PSEK1574 and healthy control on same Visium HD capture area,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40758889,,GSM9083960,,,val,hesrt,samples/GSE301486/GSM9083960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.45, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9087494,other,normal,,,cell culture,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,267200,Single-cell spatial transcriptomic profiling defines a pathogenic inflammatory niche in chronic active multiple sclerosis lesions - Microglia cell culture,GSE301696,GSE301696,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,,,luna,,control,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9087494,,,train,sda-all,samples/GSE301696/GSM9087494,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9087495,brain,perturbation,,brain,cell culture,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,147961,Single-cell spatial transcriptomic profiling defines a pathogenic inflammatory niche in chronic active multiple sclerosis lesions - Microglia cell culture,GSE301696,GSE301696,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,,luna,,IFNG,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9087495,,,train,sda-all,samples/GSE301696/GSM9087495,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9087496,other,normal,,,cell culture,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,44854,Single-cell spatial transcriptomic profiling defines a pathogenic inflammatory niche in chronic active multiple sclerosis lesions - Microglia cell culture,GSE301696,GSE301696,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,,,luna,,control,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9087496,,,train,sda-all,samples/GSE301696/GSM9087496,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9087497,brain,perturbation,,brain,cell culture,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,63065,Single-cell spatial transcriptomic profiling defines a pathogenic inflammatory niche in chronic active multiple sclerosis lesions - Microglia cell culture,GSE301696,GSE301696,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,,luna,,IFNG,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9087497,,,train,sda-all,samples/GSE301696/GSM9087497,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9087747,head and neck,disease,malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2261,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,GSE301720,GSE301720,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,Oropharynx,MONDO:0021310,luna,head and neck cancer,Responder,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.161563199403212,platform_constant,4.161563199403212,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087747,,,train,hesrt,samples/GSE301720/GSM9087747,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9087748,head and neck,disease,malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2948,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,GSE301720,GSE301720,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,Oropharynx,MONDO:0021310,luna,head and neck cancer,Non-Responder,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.137321055875736,platform_constant,4.137321055875736,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087748,,,train,hesrt,samples/GSE301720/GSM9087748,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9087749,head and neck,disease,malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2606,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,GSE301720,GSE301720,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,Oropharynx,MONDO:0021310,luna,head and neck cancer,Non-Responder,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.494987700961455,platform_constant,4.494987700961455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087749,,,train,hesrt,samples/GSE301720/GSM9087749,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9087750,head and neck,disease,malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2511,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,GSE301720,GSE301720,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,Oropharynx,MONDO:0021310,luna,head and neck cancer,Non-Responder,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.673302034596775,platform_constant,4.673302034596775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087750,,,train,hesrt,samples/GSE301720/GSM9087750,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9087751,airway,disease,malignant tumor of neck,nasal cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2945,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,GSE301720,GSE301720,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001707,Nasal Cavity,MONDO:0021310,luna,head and neck cancer,Responder,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.494987700961454,platform_constant,4.494987700961454,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087751,,,train,hesrt,samples/GSE301720/GSM9087751,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9087752,head and neck,disease,malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1642,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,GSE301720,GSE301720,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,Oropharynx,MONDO:0021310,luna,head and neck cancer,Responder,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.494987700961464,platform_constant,4.494987700961464,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087752,,,train,hesrt,samples/GSE301720/GSM9087752,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9087753,head and neck,disease,malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1526,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,GSE301720,GSE301720,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,Oropharynx,MONDO:0021310,luna,head and neck cancer,Responder,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.494987700961455,platform_constant,4.494987700961455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087753,,,train,hesrt,samples/GSE301720/GSM9087753,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9087754,oral cavity,disease,malignant tumor of neck,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2608,Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response,GSE301720,GSE301720,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Oral Cavity,MONDO:0021310,luna,head and neck cancer,Non-Responder,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.673302034596762,platform_constant,4.673302034596762,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41837744,,GSM9087754,,,train,hesrt,samples/GSE301720/GSM9087754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9093278,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,45661,The spatial transcriptomics of EGFR-mutant non-small cell lung cancer before osimertinib treatment,GSE301973,GSE301973,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005233,luna,EGFR-mutated NSCLC,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18111,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41152910,,GSM9093278,,,train,hesrt,samples/GSE301973/GSM9093278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9093279,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,165630,The spatial transcriptomics of EGFR-mutant non-small cell lung cancer before osimertinib treatment,GSE301973,GSE301973,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005233,luna,EGFR-mutated NSCLC,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18111,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41152910,,GSM9093279,,,train,hesrt,samples/GSE301973/GSM9093279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9096726,oral cavity,disease,neoplasm of neck,tongue,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,86655,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,GSE302128,GSE302128,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0001723,tongue,MONDO:0021351,luna,,Saline,luna,not stated,,extracted field,Female,GSE302128:731,731,,,release v3,imaging-based,Xenium,,,cell,9880,counts,um,1.0,verified,0.5000051482701812,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096726,,,test,sda-all,samples/GSE302128/GSM9096726,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,feature_species_differs
GSM9096727,oral cavity,disease,neoplasm of neck,tongue,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,42733,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,GSE302128,GSE302128,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0001723,tongue,MONDO:0021351,luna,,Saline,luna,not stated,,extracted field,Female,GSE302128:733,733,,,release v3,imaging-based,Xenium,,,cell,9880,counts,um,1.0,verified,0.5000034307671195,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096727,,,test,sda-all,samples/GSE302128/GSM9096727,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.74, ""disease_status"": 0.96, ""uberon"": 0.9, ""life_stage"": 1.0}",,feature_species_differs
GSM9096728,oral cavity,disease,neoplasm of neck,tongue,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,37590,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,GSE302128,GSE302128,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0001723,tongue,MONDO:0021351,luna,,Saline,luna,not stated,,extracted field,Female,GSE302128:736,736,,,release v3,imaging-based,Xenium,,,cell,9880,counts,um,1.0,verified,0.4999882214369847,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096728,,,test,sda-all,samples/GSE302128/GSM9096728,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.76, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,feature_species_differs
GSM9096729,oral cavity,disease,neoplasm of neck,tongue,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,142943,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,GSE302128,GSE302128,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0001723,tongue,MONDO:0021351,luna,,Saline,luna,not stated,,extracted field,Female,GSE302128:738,738,,,release v3,imaging-based,Xenium,,,cell,9880,counts,um,1.0,verified,0.5000060907274765,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096729,,,test,sda-all,samples/GSE302128/GSM9096729,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.67, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,feature_species_differs
GSM9096730,oral cavity,disease,neoplasm of neck,tongue,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,54469,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,GSE302128,GSE302128,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0001723,tongue,MONDO:0021351,luna,,Gedatolisib,luna,not stated,,extracted field,Female,GSE302128:732,732,,,release v3,imaging-based,Xenium,,,cell,9880,counts,um,1.0,verified,0.4999873806901616,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096730,,,test,sda-all,samples/GSE302128/GSM9096730,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.81, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,feature_species_differs
GSM9096731,oral cavity,disease,neoplasm of neck,tongue,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,52889,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,GSE302128,GSE302128,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0001723,tongue,MONDO:0021351,luna,,Gedatolisib,luna,not stated,,extracted field,Female,GSE302128:734,734,,,release v3,imaging-based,Xenium,,,cell,9880,counts,um,1.0,verified,0.4999873806901616,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096731,,,test,sda-all,samples/GSE302128/GSM9096731,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.63, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,feature_species_differs
GSM9096732,oral cavity,disease,neoplasm of neck,tongue,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,50212,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,GSE302128,GSE302128,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0001723,tongue,MONDO:0021351,luna,,Gedatolisib,luna,not stated,,extracted field,Female,GSE302128:735,735,,,release v3,imaging-based,Xenium,,,cell,9880,counts,um,1.0,verified,0.49998323878287776,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096732,,,test,sda-all,samples/GSE302128/GSM9096732,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.61, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,feature_species_differs
GSM9096733,oral cavity,disease,neoplasm of neck,tongue,tumour tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,75178,Xenium Spatial Transcriptomics of Cisplatin-Resistant Head and Neck Tumors in Humanized Mice Treated with PI3K Inhibitor Gedatolisib,GSE302128,GSE302128,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0001723,tongue,MONDO:0021351,luna,,Gedatolisib,luna,not stated,,extracted field,Female,GSE302128:737,737,,,release v3,imaging-based,Xenium,,,cell,9880,counts,um,1.0,verified,0.5000325922876355,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41053162,,GSM9096733,,,test,sda-all,samples/GSE302128/GSM9096733,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,feature_species_differs
GSM9097318,brain,disease,"supranuclear palsy, progressive, 1;palsy",primary motor cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,4763,4R-Tau Seeding Activity Reveals Molecular Subtypes in Progressive Supranuclear Palsy,GSE302160,GSE302160,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001384,brain:primary motor cortex,MONDO:0010997;MONDO:0006496,luna,PSP (low seeder),low seeder,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.037184984800885,platform_constant,,WITHHELD,,,image_review_fail,,human_visual_review,FAIL,图像与细胞/spot 错位,Image registration screen 2026-11-11: the spot grid is shifted and extends onto bare glass. The image was removed on 2026-11-11. Expression values and coordinates equal the GEO deposit.,41476155,,GSM9097318,,,val,hesrt,samples/GSE302160/GSM9097318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9097319,brain,disease,"supranuclear palsy, progressive, 1;palsy",primary motor cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: blue (heuristic),3837,4R-Tau Seeding Activity Reveals Molecular Subtypes in Progressive Supranuclear Palsy,GSE302160,GSE302160,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001384,brain:primary motor cortex,MONDO:0010997;MONDO:0006496,luna,PSP (low seeder),,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.545880211325501,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41476155,,GSM9097319,,,val,sda-all,samples/GSE302160/GSM9097319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9097320,brain,disease,"supranuclear palsy, progressive, 1;palsy",primary motor cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,4690,4R-Tau Seeding Activity Reveals Molecular Subtypes in Progressive Supranuclear Palsy,GSE302160,GSE302160,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001384,brain:primary motor cortex,MONDO:0010997;MONDO:0006496,luna,PSP (high seeder),high seeder,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.03578646514248,platform_constant,,WITHHELD,,,image_review_fail,,human_visual_review,FAIL,图像与细胞/spot 错位,Image registration screen 2026-11-11: the spot grid is shifted and extends onto bare glass. The image was removed on 2026-11-11. Expression values and coordinates equal the GEO deposit.,41476155,,GSM9097320,,,val,hesrt,samples/GSE302160/GSM9097320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9097321,brain,disease,"supranuclear palsy, progressive, 1;palsy",primary motor cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: blue (heuristic),3508,4R-Tau Seeding Activity Reveals Molecular Subtypes in Progressive Supranuclear Palsy,GSE302160,GSE302160,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001384,brain:primary motor cortex,MONDO:0010997;MONDO:0006496,luna,PSP (high seeder),,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.450765988787993,VERIFIED,ABSENT,ABSENT,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,41476155,,GSM9097321,,,val,sda-all,samples/GSE302160/GSM9097321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9098123,kidney,disease,pyelonephritis,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,5223,Murine model of MRSA-induced kidney injury (spatial transcriptomics),GSE302187,GSE302187,10090,Mus musculus,10090,Staphylococcus aureus,False,False,GEO organism field,"Staphylococcus aureus
Mus musculus",,luna,UBERON:0002113,kidney,MONDO:0006939,luna,,MRSA_day2_and_day4,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19812,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,,,GSM9098123,,,train,sda-all,samples/GSE302187/GSM9098123,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM9098124,kidney,disease,pyelonephritis,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,5338,Murine model of MRSA-induced kidney injury (spatial transcriptomics),GSE302187,GSE302187,10090,Mus musculus,10090,Staphylococcus aureus,False,False,GEO organism field,"Staphylococcus aureus
Mus musculus",,luna,UBERON:0002113,kidney,MONDO:0006939,luna,,MRSA_day2_and_day4,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19812,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,,,GSM9098124,,,train,sda-all,samples/GSE302187/GSM9098124,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM9100631,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,166847,PHLOWER - Single cell trajectory analysis using Decomposition of the Hodge Laplacian [Xenium],GSE302264,GSE302264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,scrambled,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000055202870549,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9100631,,,train,sda-all,samples/GSE302264/GSM9100631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9100632,kidney,perturbation,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,90617,PHLOWER - Single cell trajectory analysis using Decomposition of the Hodge Laplacian [Xenium],GSE302264,GSE302264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,siRNA,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49995886804870016,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9100632,,,train,sda-all,samples/GSE302264/GSM9100632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9100633,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,11229,PHLOWER - Single cell trajectory analysis using Decomposition of the Hodge Laplacian [Xenium],GSE302264,GSE302264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,day 19,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000287923659098,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9100633,,,train,sda-all,samples/GSE302264/GSM9100633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9100634,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,106751,PHLOWER - Single cell trajectory analysis using Decomposition of the Hodge Laplacian [Xenium],GSE302264,GSE302264,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,day 25,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000143266475644,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9100634,,,train,sda-all,samples/GSE302264/GSM9100634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9226654,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,268206,Decoding Lymphangioleiomyomatosis (LAM) Niche Environment via Integrative Analysis of Single Cell Multiomics and Spatial Transcriptomics,GSE302356,GSE302356,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0011705,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.5183210102795384,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9226654,,,test,sda-all,samples/GSE302356/GSM9226654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226655,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,173579,Decoding Lymphangioleiomyomatosis (LAM) Niche Environment via Integrative Analysis of Single Cell Multiomics and Spatial Transcriptomics,GSE302356,GSE302356,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0011705,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999808605114077,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9226655,,,test,sda-all,samples/GSE302356/GSM9226655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226656,lung,disease,lymphangioleiomyomatosis,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2311,Decoding Lymphangioleiomyomatosis (LAM) Niche Environment via Integrative Analysis of Single Cell Multiomics and Spatial Transcriptomics,GSE302356,GSE302356,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0011705,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,9.636023739276627,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9226656,,,test,sda-all,samples/GSE302356/GSM9226656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9104197,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,fluorescence: multichannel (heuristic),3962,Rod-shaped microglia interact with neuronal dendrites to regulate cortical excitability in TDP-43 related neurodegeneration,GSE302449,GSE302449,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,adult,11 weeks old,extracted field,Female,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.243176547838095,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40975067,,GSM9104197,,,test,sda-all,samples/GSE302449/GSM9104197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9104198,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: multichannel (heuristic),3343,Rod-shaped microglia interact with neuronal dendrites to regulate cortical excitability in TDP-43 related neurodegeneration,GSE302449,GSE302449,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Control,age rule: age with unit,adult,11 weeks old,extracted field,Male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.240801371385965,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40975067,,GSM9104198,,,test,sda-all,samples/GSE302449/GSM9104198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9104199,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,fluorescence: multichannel (heuristic),3033,Rod-shaped microglia interact with neuronal dendrites to regulate cortical excitability in TDP-43 related neurodegeneration,GSE302449,GSE302449,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,rNLS8,age rule: age with unit,adult,11 weeks old,extracted field,Female,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.245788498644368,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40975067,,GSM9104199,,,test,sda-all,samples/GSE302449/GSM9104199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9104200,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,fluorescence: multichannel (heuristic),2656,Rod-shaped microglia interact with neuronal dendrites to regulate cortical excitability in TDP-43 related neurodegeneration,GSE302449,GSE302449,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,rNLS8,age rule: age with unit,adult,11 weeks old,extracted field,Male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.242327988565199,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,40975067,,GSM9104200,,,test,sda-all,samples/GSE302449/GSM9104200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9104597,skin,normal,,skin of body,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,286053,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium embryo],GSE302470,GSE302470,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0002097,,,luna,,Krt14Cre -; Lsd1 fl/fl,luna,embryonic,embryo,not stated,,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.49999673216853296,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104597,,,train,sda-all,samples/GSE302470/GSM9104597,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 0.96, ""disease_status"": 0.44, ""uberon"": 0.31, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9104598,skin,perturbation,,skin of body,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,386062,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium embryo],GSE302470,GSE302470,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,,,luna,,Krt14Cre +; Lsd1 fl/fl,luna,embryonic,embryo,not stated,,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.4999961880282304,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104598,,,train,sda-all,samples/GSE302470/GSM9104598,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 0.93, ""disease_status"": 0.92, ""uberon"": 0.37, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9104735,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,277947,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium tumor],GSE302473,GSE302473,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0002529,luna,Squamous cell carcinoma,DMSO,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49999448397595014,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104735,,,train,sda-all,samples/GSE302473/GSM9104735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9104736,skin,disease,skin squamous cell carcinoma,zone of skin,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,149237,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium tumor],GSE302473,GSE302473,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0002529,luna,Squamous cell carcinoma,LSD1i,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.4999972427484283,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104736,,,train,sda-all,samples/GSE302473/GSM9104736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9104737,skin,perturbation,,skin of body,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,37990,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium CreERT],GSE302474,GSE302474,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,Whole dorsal skin,,luna,,Corn Oil,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.500001379995584,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104737,,,train,sda-all,samples/GSE302474/GSM9104737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9104738,skin,disease,skin disorder,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,95388,Inhibiting LSD1 unlocks retinoid AP-1 programming to activate epithelial immunity and skin tumor suppression [Xenium CreERT],GSE302474,GSE302474,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Whole dorsal skin,MONDO:0005093,mondo_predicate (Luna: perturbation),,Tamoxifen,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,mMulti_480g,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,0.49999862220997515,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41817619,,GSM9104738,,,train,sda-all,samples/GSE302474/GSM9104738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9105216,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,12085,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:377,377,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,534,counts,um,1.0,verified,0.5000117861983617,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105216,,,train,sda-all,samples/GSE302502/GSM9105216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105217,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,15316,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:210,210,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,508,counts,um,1.0,verified,0.5000034522439586,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105217,,,train,sda-all,samples/GSE302502/GSM9105217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105218,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,17561,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:569,569,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,535,counts,um,1.0,verified,0.5000038076588338,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105218,,,train,sda-all,samples/GSE302502/GSM9105218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105219,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1757,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:351,351,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,472,counts,um,1.0,verified,0.5000103092783506,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105219,,,train,sda-all,samples/GSE302502/GSM9105219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105220,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,4394,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:496,496,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,499,counts,um,1.0,verified,0.4999845450049456,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105220,,,train,sda-all,samples/GSE302502/GSM9105220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105221,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10532,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:567,567,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,503,counts,um,1.0,verified,0.4999911686782455,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105221,,,train,sda-all,samples/GSE302502/GSM9105221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105222,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,3532,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:157,157,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,489,counts,um,1.0,verified,0.49999088212410037,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105222,,,train,sda-all,samples/GSE302502/GSM9105222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105223,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1196,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:548,548,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,474,counts,um,1.0,verified,0.49999939190503984,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105223,,,train,sda-all,samples/GSE302502/GSM9105223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105224,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1291,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:484,484,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,480,counts,um,1.0,verified,0.5000032331488283,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105224,,,train,sda-all,samples/GSE302502/GSM9105224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105225,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,419,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:565,565,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,471,counts,um,1.0,verified,0.4999974193548387,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105225,,,train,sda-all,samples/GSE302502/GSM9105225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105226,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,4736,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:511,511,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,504,counts,um,1.0,verified,0.5000054996425233,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105226,,,train,sda-all,samples/GSE302502/GSM9105226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9105227,brain,disease,glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,2011,Spatial immune profiling defines a subset of human gliomas with functional tertiary lymphoid structures [Xenium],GSE302502,GSE302502,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,,MONDO:0021042,luna,Glioma,,luna,not stated,,not stated,,GSE302502:80,80,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,482,counts,um,1.0,verified,0.5000090020576132,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41125076,,GSM9105227,,,train,sda-all,samples/GSE302502/GSM9105227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9106293,small intestine,disease,Crohn disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,520101,Elucidating the fibrotic niche and cellular dynamics in crohn’s disease-associated fibrostenosis,GSE302569,GSE302569,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,ileum,MONDO:0005011,luna,Crohn's disease,strictured fibrotic ileum,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,17.479390571293557,platform_constant,17.479390571293557,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41344440,,GSM9106293,,,train,hesrt,samples/GSE302569/GSM9106293,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9106294,small intestine,disease,Crohn disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,468841,Elucidating the fibrotic niche and cellular dynamics in crohn’s disease-associated fibrostenosis,GSE302569,GSE302569,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,ileum,MONDO:0005011,luna,Crohn's disease,non-strictured non-fibrotic ileum,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,16.66961830152686,platform_constant,16.66961830152686,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41344440,,GSM9106294,,,train,hesrt,samples/GSE302569/GSM9106294,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9107838,brain,disease,oligodendroglioma,brain,tumour tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,False,,29655,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,GSE302642,GSE302642,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH-mutant glioma,MONDO:0016695,luna,"Oligodendroglioma, IDH-mutant, 1p/19q-codel",,age rule: age in years,adult,48 years,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41505555,,GSM9107838,,,train,sda-all,samples/GSE302642/GSM9107838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9107839,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,False,,45749,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,GSE302642,GSE302642,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH-mutant glioma,MONDO:0019781,luna,"Astrocytoma, IDH-mutant, 1p/19q-non-codel",,age rule: age in years,adult,61 years,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41505555,,GSM9107839,,,train,sda-all,samples/GSE302642/GSM9107839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9107840,brain,disease,astrocytoma (excluding glioblastoma),brain,primary tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,False,,21799,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,GSE302642,GSE302642,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Patient-derived peritumoral tissue,MONDO:0019781,mondo_predicate,"Astrocytoma, IDH-mutant, 1p/19q-non-codel",,age rule: age in years,adult,29 years,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41505555,,GSM9107840,,,train,sda-all,samples/GSE302642/GSM9107840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9107841,brain,normal,,brain,primary tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,False,,23123,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,GSE302642,GSE302642,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Patient-derived peritumoral tissue,,luna,"Astrocytoma, IDH-mutant, 1p/19q-non-codel",,age rule: age in years,adult,42 years,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41505555,,GSM9107841,,,train,sda-all,samples/GSE302642/GSM9107841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,normal_but_disease_text;low_confidence_annotation
GSM9107842,brain,disease,,brain,primary tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,False,,4411,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,GSE302642,GSE302642,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Patient-derived peritumoral tissue,,luna,"Oligodendroglioma, IDH-mutant, 1p/19q-codel",,age rule: age in years,adult,48 years,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41505555,,GSM9107842,,,train,sda-all,samples/GSE302642/GSM9107842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9107843,brain,disease,astrocytic tumor,brain,primary tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,False,,9615,IDH-mutant gliomas arise from glial progenitor cells harboring the initial driver mutation (Related accession no. GSE275791) - Spatial transcriptomics dataset,GSE302642,GSE302642,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Patient-derived peritumoral tissue,MONDO:0021636,mondo_predicate,"Astrocytoma, IDH-mutant, 1p/19q-non-codel",,age rule: age in years,adult,61 years,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41505555,,GSM9107843,,,train,sda-all,samples/GSE302642/GSM9107843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9108683,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1413,Spatial transcriptomics reveals injury-responsive compartments and coordinated immune–fibrotic signaling  in ANCA-associated renal vasculitis,GSE302677,GSE302677,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,kidney cortex_control,,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.4180614253049875,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42602048,,GSM9108683,,,train,sda-all,samples/GSE302677/GSM9108683,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9108684,kidney,disease,anti-neutrophil cytoplasmic antibody-associated vasculitis,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),892,Spatial transcriptomics reveals injury-responsive compartments and coordinated immune–fibrotic signaling  in ANCA-associated renal vasculitis,GSE302677,GSE302677,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,kidney cortex_mild AAV,MONDO:0015492,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.041496270119149,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42602048,,GSM9108684,,,train,sda-all,samples/GSE302677/GSM9108684,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9108685,kidney,disease,anti-neutrophil cytoplasmic antibody-associated vasculitis,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1277,Spatial transcriptomics reveals injury-responsive compartments and coordinated immune–fibrotic signaling  in ANCA-associated renal vasculitis,GSE302677,GSE302677,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001225,kidney cortex_severe AAV,MONDO:0015492,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.93296089418714,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42602048,,GSM9108685,,,train,sda-all,samples/GSE302677/GSM9108685,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9111711,liver,disease,,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2082,Spatial transcriptional features of MYCN niche in liver tumorigenesis.,GSE302815,GSE302815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.300638244931022,platform_constant,4.300638244931022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41706888,,GSM9111711,,,train,hesrt,samples/GSE302815/GSM9111711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9111712,liver,disease,,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2895,Spatial transcriptional features of MYCN niche in liver tumorigenesis.,GSE302815,GSE302815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.299874657332631,platform_constant,4.299874657332631,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41706888,,GSM9111712,,,train,hesrt,samples/GSE302815/GSM9111712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9111713,liver,disease,,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2804,Spatial transcriptional features of MYCN niche in liver tumorigenesis.,GSE302815,GSE302815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.2991115829653195,platform_constant,4.2991115829653195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41706888,,GSM9111713,,,train,hesrt,samples/GSE302815/GSM9111713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9111714,liver,disease,,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3073,Spatial transcriptional features of MYCN niche in liver tumorigenesis.,GSE302815,GSE302815,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.298729784212042,platform_constant,4.298729784212042,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41706888,,GSM9111714,,,train,hesrt,samples/GSE302815/GSM9111714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9116169,eye,disease,keratoconus,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,950,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,MONDO:0015486,luna,Keratoconus,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.524229088305471,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116169,,,train,sda-all,samples/GSE303036/GSM9116169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116170,eye,disease,keratoconus,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1036,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,MONDO:0015486,luna,Keratoconus,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.50663821541671,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116170,,,train,sda-all,samples/GSE303036/GSM9116170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116171,eye,disease,keratoconus,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1575,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,MONDO:0015486,luna,Keratoconus,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.569285892976008,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116171,,,train,sda-all,samples/GSE303036/GSM9116171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116172,eye,disease,keratoconus,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1065,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,MONDO:0015486,luna,Keratoconus,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.570839681022168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116172,,,train,sda-all,samples/GSE303036/GSM9116172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116173,eye,disease,keratoconus,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1226,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,MONDO:0015486,luna,Keratoconus,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.5645024192018155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116173,,,train,sda-all,samples/GSE303036/GSM9116173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116174,eye,disease,keratoconus,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1291,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,MONDO:0015486,luna,Keratoconus,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.571432165775176,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116174,,,train,sda-all,samples/GSE303036/GSM9116174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116175,eye,disease,keratoconus,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1646,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,MONDO:0015486,luna,Keratoconus,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.56942597974196,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116175,,,train,sda-all,samples/GSE303036/GSM9116175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116176,eye,normal,,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1505,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,,luna,non-affected,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.5710234903688285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116176,,,train,sda-all,samples/GSE303036/GSM9116176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116177,eye,normal,,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,2357,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,,luna,non-affected,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.573307138726922,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116177,,,train,sda-all,samples/GSE303036/GSM9116177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116178,eye,normal,,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1727,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,,luna,non-affected,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.573982390167501,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116178,,,train,sda-all,samples/GSE303036/GSM9116178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116179,eye,normal,,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1886,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,,luna,non-affected,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.568480816856961,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116179,,,train,sda-all,samples/GSE303036/GSM9116179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116180,eye,normal,,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1556,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,,luna,non-affected,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.571516938708509,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116180,,,train,sda-all,samples/GSE303036/GSM9116180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116181,eye,disease,keratoconus,cornea,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E,1368,Eye-conic' spatial transcriptomics of keratoconus corneas,GSE303036,GSE303036,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000964,Cornea,MONDO:0015486,luna,Keratoconus,,luna,not stated,,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.572047323306235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41931003,,GSM9116181,,,train,sda-all,samples/GSE303036/GSM9116181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116888,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1534,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116888,,,val,sda-all,samples/GSE303070/GSM9116888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9116889,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2357,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116889,,,val,sda-all,samples/GSE303070/GSM9116889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9116890,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2191,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116890,,,val,sda-all,samples/GSE303070/GSM9116890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116891,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1864,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116891,,,val,sda-all,samples/GSE303070/GSM9116891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9116892,colon,disease,colorectal cancer;colonic disorder,colon,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3204,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005575;MONDO:0003409,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116892,,,val,sda-all,samples/GSE303070/GSM9116892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.44, ""uberon"": 0.61, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9116893,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2409,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116893,,,val,sda-all,samples/GSE303070/GSM9116893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9116894,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1958,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116894,,,val,sda-all,samples/GSE303070/GSM9116894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9116895,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2431,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116895,,,val,sda-all,samples/GSE303070/GSM9116895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116896,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,3823,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116896,,,val,sda-all,samples/GSE303070/GSM9116896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 0.88}",,
GSM9116897,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1656,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116897,,,val,sda-all,samples/GSE303070/GSM9116897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM9116898,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1660,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116898,,,val,sda-all,samples/GSE303070/GSM9116898,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116899,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2197,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116899,,,val,sda-all,samples/GSE303070/GSM9116899,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9116900,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2299,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116900,,,val,sda-all,samples/GSE303070/GSM9116900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116901,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3371,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116901,,,val,sda-all,samples/GSE303070/GSM9116901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.52, ""uberon"": 0.67, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9116902,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2010,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116902,,,val,sda-all,samples/GSE303070/GSM9116902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116903,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1018,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116903,,,val,sda-all,samples/GSE303070/GSM9116903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9116904,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2929,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116904,,,val,sda-all,samples/GSE303070/GSM9116904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116905,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3458,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116905,,,val,sda-all,samples/GSE303070/GSM9116905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116906,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1759,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116906,,,val,sda-all,samples/GSE303070/GSM9116906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM9116907,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1796,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116907,,,val,sda-all,samples/GSE303070/GSM9116907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116908,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2613,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116908,,,val,sda-all,samples/GSE303070/GSM9116908,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9116909,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2103,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116909,,,val,sda-all,samples/GSE303070/GSM9116909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9116910,colon,disease,colorectal cancer;colonic disorder,colon,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3643,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005575;MONDO:0003409,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116910,,,val,sda-all,samples/GSE303070/GSM9116910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.43, ""disease_status"": 0.37, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9116911,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1914,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116911,,,val,sda-all,samples/GSE303070/GSM9116911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9116912,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1645,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116912,,,val,sda-all,samples/GSE303070/GSM9116912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9116913,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2964,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116913,,,val,sda-all,samples/GSE303070/GSM9116913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116914,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3787,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116914,,,val,sda-all,samples/GSE303070/GSM9116914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116915,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1838,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116915,,,val,sda-all,samples/GSE303070/GSM9116915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9116916,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1997,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116916,,,val,sda-all,samples/GSE303070/GSM9116916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116917,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2057,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116917,,,val,sda-all,samples/GSE303070/GSM9116917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9116918,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2367,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116918,,,val,sda-all,samples/GSE303070/GSM9116918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116919,colon,disease,colonic neoplasm;colorectal cancer,colon,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3026,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,mondo_predicate,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116919,,,val,sda-all,samples/GSE303070/GSM9116919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.29, ""uberon"": 0.76, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9116920,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2193,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116920,,,val,sda-all,samples/GSE303070/GSM9116920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116921,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1517,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116921,,,val,sda-all,samples/GSE303070/GSM9116921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM9116922,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2336,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116922,,,val,sda-all,samples/GSE303070/GSM9116922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116923,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3609,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116923,,,val,sda-all,samples/GSE303070/GSM9116923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116924,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2388,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116924,,,val,sda-all,samples/GSE303070/GSM9116924,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9116925,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1730,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116925,,,val,sda-all,samples/GSE303070/GSM9116925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116926,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2482,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116926,,,val,sda-all,samples/GSE303070/GSM9116926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116927,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1913,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116927,,,val,sda-all,samples/GSE303070/GSM9116927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9116928,colon,disease,colorectal cancer;colonic disorder,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,4580,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005575;MONDO:0003409,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116928,,,val,sda-all,samples/GSE303070/GSM9116928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.39, ""uberon"": 0.64, ""life_stage"": 0.77}",sample_kind;disease_status,low_confidence_annotation
GSM9116929,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1940,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116929,,,val,sda-all,samples/GSE303070/GSM9116929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9116930,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1472,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116930,,,val,sda-all,samples/GSE303070/GSM9116930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM9116931,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3108,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116931,,,val,sda-all,samples/GSE303070/GSM9116931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116932,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2424,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116932,,,val,sda-all,samples/GSE303070/GSM9116932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9116933,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2201,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116933,,,val,sda-all,samples/GSE303070/GSM9116933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116934,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1362,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116934,,,val,sda-all,samples/GSE303070/GSM9116934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116935,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2102,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116935,,,val,sda-all,samples/GSE303070/GSM9116935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116936,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2071,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116936,,,val,sda-all,samples/GSE303070/GSM9116936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9116937,colon,disease,colonic neoplasm;colorectal cancer,colon,primary tissue,Homo sapiens,human,juvenile,male,CosMx,CosMx,False,,4556,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,juvenile,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116937,,,val,sda-all,samples/GSE303070/GSM9116937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.58, ""disease_status"": 0.75, ""uberon"": 0.6900000000000001, ""life_stage"": 0.6000000000000001}",sample_kind,low_confidence_annotation
GSM9116938,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1383,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116938,,,val,sda-all,samples/GSE303070/GSM9116938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9116939,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1676,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116939,,,val,sda-all,samples/GSE303070/GSM9116939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116940,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2282,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116940,,,val,sda-all,samples/GSE303070/GSM9116940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9116941,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3370,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116941,,,val,sda-all,samples/GSE303070/GSM9116941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116942,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2516,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116942,,,val,sda-all,samples/GSE303070/GSM9116942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116943,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2253,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116943,,,val,sda-all,samples/GSE303070/GSM9116943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116944,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2575,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116944,,,val,sda-all,samples/GSE303070/GSM9116944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116945,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2143,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116945,,,val,sda-all,samples/GSE303070/GSM9116945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9116946,colon,disease,colonic neoplasm;colorectal cancer,colon,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,4752,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116946,,,val,sda-all,samples/GSE303070/GSM9116946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 0.31, ""uberon"": 0.6900000000000001, ""life_stage"": 0.5}",sample_kind;disease_status;life_stage,low_confidence_annotation
GSM9116947,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1466,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116947,,,val,sda-all,samples/GSE303070/GSM9116947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9116948,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1761,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116948,,,val,sda-all,samples/GSE303070/GSM9116948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9116949,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2053,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116949,,,val,sda-all,samples/GSE303070/GSM9116949,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9116950,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2957,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116950,,,val,sda-all,samples/GSE303070/GSM9116950,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9116951,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2161,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116951,,,val,sda-all,samples/GSE303070/GSM9116951,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9116952,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1951,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116952,,,val,sda-all,samples/GSE303070/GSM9116952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116953,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2307,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116953,,,val,sda-all,samples/GSE303070/GSM9116953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116954,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,4947,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116954,,,val,sda-all,samples/GSE303070/GSM9116954,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116955,colon,disease,colonic neoplasm;colorectal cancer,colon,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,4310,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116955,,,val,sda-all,samples/GSE303070/GSM9116955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.77, ""uberon"": 0.6900000000000001, ""life_stage"": 0.98}",sample_kind,low_confidence_annotation
GSM9116956,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1374,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116956,,,val,sda-all,samples/GSE303070/GSM9116956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9116957,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,2136,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116957,,,val,sda-all,samples/GSE303070/GSM9116957,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 0.99}",,
GSM9116958,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1915,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116958,,,val,sda-all,samples/GSE303070/GSM9116958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116959,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3160,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116959,,,val,sda-all,samples/GSE303070/GSM9116959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116960,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2431,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116960,,,val,sda-all,samples/GSE303070/GSM9116960,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9116961,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1800,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116961,,,val,sda-all,samples/GSE303070/GSM9116961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116962,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2731,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116962,,,val,sda-all,samples/GSE303070/GSM9116962,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9116963,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,6102,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116963,,,val,sda-all,samples/GSE303070/GSM9116963,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116964,colon,disease,colorectal cancer;colonic disorder,colon,primary tissue,Homo sapiens,human,juvenile,male,CosMx,CosMx,False,,4364,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005575;MONDO:0003409,luna,,,luna,juvenile,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116964,,,val,sda-all,samples/GSE303070/GSM9116964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.5700000000000001, ""uberon"": 0.64, ""life_stage"": 0.5}",disease_status;life_stage,low_confidence_annotation
GSM9116965,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1328,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116965,,,val,sda-all,samples/GSE303070/GSM9116965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 0.99}",,
GSM9116966,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1722,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116966,,,val,sda-all,samples/GSE303070/GSM9116966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116967,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1616,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116967,,,val,sda-all,samples/GSE303070/GSM9116967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9116968,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2797,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116968,,,val,sda-all,samples/GSE303070/GSM9116968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116969,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2614,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116969,,,val,sda-all,samples/GSE303070/GSM9116969,sda-tissue-disease-2.3,"{""organ"": 0.53, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9116970,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1816,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116970,,,val,sda-all,samples/GSE303070/GSM9116970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116971,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2246,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116971,,,val,sda-all,samples/GSE303070/GSM9116971,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116972,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,4843,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116972,,,val,sda-all,samples/GSE303070/GSM9116972,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9116973,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,5285,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116973,,,val,sda-all,samples/GSE303070/GSM9116973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.79, ""uberon"": 0.72, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM9116974,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1502,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116974,,,val,sda-all,samples/GSE303070/GSM9116974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 0.98}",,
GSM9116975,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1644,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116975,,,val,sda-all,samples/GSE303070/GSM9116975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9116976,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1636,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116976,,,val,sda-all,samples/GSE303070/GSM9116976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9116977,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2440,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116977,,,val,sda-all,samples/GSE303070/GSM9116977,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9116978,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2102,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116978,,,val,sda-all,samples/GSE303070/GSM9116978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116979,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2622,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116979,,,val,sda-all,samples/GSE303070/GSM9116979,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116980,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2873,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116980,,,val,sda-all,samples/GSE303070/GSM9116980,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9116981,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3833,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116981,,,val,sda-all,samples/GSE303070/GSM9116981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9116982,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1404,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116982,,,val,sda-all,samples/GSE303070/GSM9116982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9116983,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1894,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116983,,,val,sda-all,samples/GSE303070/GSM9116983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9116984,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1338,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116984,,,val,sda-all,samples/GSE303070/GSM9116984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9116985,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2590,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116985,,,val,sda-all,samples/GSE303070/GSM9116985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116986,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1466,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116986,,,val,sda-all,samples/GSE303070/GSM9116986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM9116987,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2689,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116987,,,val,sda-all,samples/GSE303070/GSM9116987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9116988,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2672,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116988,,,val,sda-all,samples/GSE303070/GSM9116988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9116989,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2270,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116989,,,val,sda-all,samples/GSE303070/GSM9116989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9116990,colon,disease,colonic neoplasm;colorectal cancer,colon,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3266,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,mondo_predicate,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116990,,,val,sda-all,samples/GSE303070/GSM9116990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.28, ""uberon"": 0.61, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9116991,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2214,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116991,,,val,sda-all,samples/GSE303070/GSM9116991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9116992,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2442,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116992,,,val,sda-all,samples/GSE303070/GSM9116992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9116993,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2735,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116993,,,val,sda-all,samples/GSE303070/GSM9116993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116994,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,2982,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116994,,,val,sda-all,samples/GSE303070/GSM9116994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 0.98}",,
GSM9116995,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2038,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116995,,,val,sda-all,samples/GSE303070/GSM9116995,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9116996,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1900,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116996,,,val,sda-all,samples/GSE303070/GSM9116996,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9116997,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2379,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116997,,,val,sda-all,samples/GSE303070/GSM9116997,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9116998,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,4707,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116998,,,val,sda-all,samples/GSE303070/GSM9116998,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9116999,colon,disease,colonic neoplasm;colorectal cancer,caecum,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,4157,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9116999,,,val,sda-all,samples/GSE303070/GSM9116999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 0.48, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117000,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1854,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117000,,,val,sda-all,samples/GSE303070/GSM9117000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM9117001,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1873,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117001,,,val,sda-all,samples/GSE303070/GSM9117001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117002,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1872,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117002,,,val,sda-all,samples/GSE303070/GSM9117002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM9117003,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2190,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117003,,,val,sda-all,samples/GSE303070/GSM9117003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9117004,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2395,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117004,,,val,sda-all,samples/GSE303070/GSM9117004,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117005,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1790,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117005,,,val,sda-all,samples/GSE303070/GSM9117005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117006,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2477,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117006,,,val,sda-all,samples/GSE303070/GSM9117006,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117007,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3459,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117007,,,val,sda-all,samples/GSE303070/GSM9117007,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117008,colon,disease,colonic neoplasm;colorectal cancer,caecum,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,4166,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117008,,,val,sda-all,samples/GSE303070/GSM9117008,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.49, ""disease_status"": 0.59, ""uberon"": 0.92, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117009,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1718,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117009,,,val,sda-all,samples/GSE303070/GSM9117009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117010,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1563,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117010,,,val,sda-all,samples/GSE303070/GSM9117010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117011,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1636,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117011,,,val,sda-all,samples/GSE303070/GSM9117011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117012,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2583,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117012,,,val,sda-all,samples/GSE303070/GSM9117012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117013,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1857,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117013,,,val,sda-all,samples/GSE303070/GSM9117013,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9117014,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2171,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117014,,,val,sda-all,samples/GSE303070/GSM9117014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117015,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2162,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117015,,,val,sda-all,samples/GSE303070/GSM9117015,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117016,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3003,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117016,,,val,sda-all,samples/GSE303070/GSM9117016,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117017,colon,disease,colonic disorder;intestinal cancer,caecum,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,4539,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0003409;MONDO:0005814,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117017,,,val,sda-all,samples/GSE303070/GSM9117017,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.43, ""disease_status"": 0.36, ""uberon"": 0.8, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117018,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1442,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117018,,,val,sda-all,samples/GSE303070/GSM9117018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117019,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1920,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117019,,,val,sda-all,samples/GSE303070/GSM9117019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 0.6000000000000001}",,
GSM9117020,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2218,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117020,,,val,sda-all,samples/GSE303070/GSM9117020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9117021,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3140,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117021,,,val,sda-all,samples/GSE303070/GSM9117021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117022,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1998,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117022,,,val,sda-all,samples/GSE303070/GSM9117022,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117023,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2033,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117023,,,val,sda-all,samples/GSE303070/GSM9117023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117024,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2233,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117024,,,val,sda-all,samples/GSE303070/GSM9117024,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117025,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3156,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117025,,,val,sda-all,samples/GSE303070/GSM9117025,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117026,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,4448,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117026,,,val,sda-all,samples/GSE303070/GSM9117026,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.72, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117027,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1415,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117027,,,val,sda-all,samples/GSE303070/GSM9117027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117028,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1696,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117028,,,val,sda-all,samples/GSE303070/GSM9117028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9117029,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2426,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117029,,,val,sda-all,samples/GSE303070/GSM9117029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117030,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2256,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117030,,,val,sda-all,samples/GSE303070/GSM9117030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117031,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1628,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117031,,,val,sda-all,samples/GSE303070/GSM9117031,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117032,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2428,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117032,,,val,sda-all,samples/GSE303070/GSM9117032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117033,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2176,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117033,,,val,sda-all,samples/GSE303070/GSM9117033,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117034,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2771,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117034,,,val,sda-all,samples/GSE303070/GSM9117034,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117035,colon,disease,colonic neoplasm;colorectal cancer,caecum,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,5038,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117035,,,val,sda-all,samples/GSE303070/GSM9117035,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.54, ""disease_status"": 0.76, ""uberon"": 0.76, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117036,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1689,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117036,,,val,sda-all,samples/GSE303070/GSM9117036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117037,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1684,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117037,,,val,sda-all,samples/GSE303070/GSM9117037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.89}",,
GSM9117038,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2441,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117038,,,val,sda-all,samples/GSE303070/GSM9117038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9117039,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2254,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117039,,,val,sda-all,samples/GSE303070/GSM9117039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117040,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1650,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117040,,,val,sda-all,samples/GSE303070/GSM9117040,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117041,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1349,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117041,,,val,sda-all,samples/GSE303070/GSM9117041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117042,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2151,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117042,,,val,sda-all,samples/GSE303070/GSM9117042,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117043,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2088,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117043,,,val,sda-all,samples/GSE303070/GSM9117043,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9117044,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,4226,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117044,,,val,sda-all,samples/GSE303070/GSM9117044,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.65, ""disease_status"": 0.68, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117045,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1601,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117045,,,val,sda-all,samples/GSE303070/GSM9117045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117046,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,juvenile,male,CosMx,CosMx,False,,1753,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,juvenile,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117046,,,val,sda-all,samples/GSE303070/GSM9117046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 0.63}",,
GSM9117047,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2089,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117047,,,val,sda-all,samples/GSE303070/GSM9117047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117048,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2501,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117048,,,val,sda-all,samples/GSE303070/GSM9117048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117049,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2482,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117049,,,val,sda-all,samples/GSE303070/GSM9117049,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9117050,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,548,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117050,,,val,sda-all,samples/GSE303070/GSM9117050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117051,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1925,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117051,,,val,sda-all,samples/GSE303070/GSM9117051,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9117052,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1659,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117052,,,val,sda-all,samples/GSE303070/GSM9117052,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.97}",,
GSM9117053,colon,disease,colorectal cancer;colonic disorder,caecum,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,5496,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005575;MONDO:0003409,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117053,,,val,sda-all,samples/GSE303070/GSM9117053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.52, ""uberon"": 0.93, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117054,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1792,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117054,,,val,sda-all,samples/GSE303070/GSM9117054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9117055,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1694,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117055,,,val,sda-all,samples/GSE303070/GSM9117055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.72, ""life_stage"": 0.91}",,
GSM9117056,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2220,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117056,,,val,sda-all,samples/GSE303070/GSM9117056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117057,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2620,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117057,,,val,sda-all,samples/GSE303070/GSM9117057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117058,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2468,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117058,,,val,sda-all,samples/GSE303070/GSM9117058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117059,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,617,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117059,,,val,sda-all,samples/GSE303070/GSM9117059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117060,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2479,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117060,,,val,sda-all,samples/GSE303070/GSM9117060,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117061,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2772,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117061,,,val,sda-all,samples/GSE303070/GSM9117061,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117062,colon,disease,colorectal cancer;colonic disorder,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3798,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005575;MONDO:0003409,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117062,,,val,sda-all,samples/GSE303070/GSM9117062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.59, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9117063,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1646,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117063,,,val,sda-all,samples/GSE303070/GSM9117063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117064,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,juvenile,male,CosMx,CosMx,False,,1546,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,juvenile,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117064,,,val,sda-all,samples/GSE303070/GSM9117064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 0.78}",,
GSM9117065,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2494,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor150,Donor150,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117065,,,val,sda-all,samples/GSE303070/GSM9117065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117066,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2652,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117066,,,val,sda-all,samples/GSE303070/GSM9117066,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117067,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2412,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117067,,,val,sda-all,samples/GSE303070/GSM9117067,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117068,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,514,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117068,,,val,sda-all,samples/GSE303070/GSM9117068,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117069,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2487,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117069,,,val,sda-all,samples/GSE303070/GSM9117069,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117070,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1293,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117070,,,val,sda-all,samples/GSE303070/GSM9117070,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117071,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3681,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117071,,,val,sda-all,samples/GSE303070/GSM9117071,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 0.5700000000000001, ""uberon"": 0.68, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117072,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1515,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117072,,,val,sda-all,samples/GSE303070/GSM9117072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9117073,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,juvenile,male,CosMx,CosMx,False,,1757,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,juvenile,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117073,,,val,sda-all,samples/GSE303070/GSM9117073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9117074,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2879,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117074,,,val,sda-all,samples/GSE303070/GSM9117074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117075,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2007,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117075,,,val,sda-all,samples/GSE303070/GSM9117075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117076,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,646,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117076,,,val,sda-all,samples/GSE303070/GSM9117076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117077,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2397,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117077,,,val,sda-all,samples/GSE303070/GSM9117077,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117078,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2217,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117078,,,val,sda-all,samples/GSE303070/GSM9117078,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117079,colon,disease,colonic neoplasm;colorectal cancer,colon,primary tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,3421,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117079,,,val,sda-all,samples/GSE303070/GSM9117079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.41000000000000003, ""uberon"": 0.6900000000000001, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9117080,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1620,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117080,,,val,sda-all,samples/GSE303070/GSM9117080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 0.79}",,
GSM9117081,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1549,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117081,,,val,sda-all,samples/GSE303070/GSM9117081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9117082,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1427,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117082,,,val,sda-all,samples/GSE303070/GSM9117082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.93}",,
GSM9117083,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1485,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117083,,,val,sda-all,samples/GSE303070/GSM9117083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117084,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2784,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117084,,,val,sda-all,samples/GSE303070/GSM9117084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117085,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2029,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117085,,,val,sda-all,samples/GSE303070/GSM9117085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117086,colon,disease,colorectal cancer;colonic disorder,colon,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3275,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005575;MONDO:0003409,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117086,,,val,sda-all,samples/GSE303070/GSM9117086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.6900000000000001, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9117087,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2157,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117087,,,val,sda-all,samples/GSE303070/GSM9117087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9117088,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1212,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117088,,,val,sda-all,samples/GSE303070/GSM9117088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117089,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2150,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117089,,,val,sda-all,samples/GSE303070/GSM9117089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9117090,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,4696,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117090,,,val,sda-all,samples/GSE303070/GSM9117090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 0.9500000000000001}",,
GSM9117091,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2549,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117091,,,val,sda-all,samples/GSE303070/GSM9117091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117092,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2177,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117092,,,val,sda-all,samples/GSE303070/GSM9117092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117093,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2203,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117093,,,val,sda-all,samples/GSE303070/GSM9117093,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117094,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2085,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117094,,,val,sda-all,samples/GSE303070/GSM9117094,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117095,colon,disease,colonic neoplasm;intestinal cancer,caecum,primary tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,4049,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005814,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117095,,,val,sda-all,samples/GSE303070/GSM9117095,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.42, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117096,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1528,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117096,,,val,sda-all,samples/GSE303070/GSM9117096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 0.71}",,
GSM9117097,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1636,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117097,,,val,sda-all,samples/GSE303070/GSM9117097,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.92}",,
GSM9117098,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2392,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117098,,,val,sda-all,samples/GSE303070/GSM9117098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117099,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2050,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117099,,,val,sda-all,samples/GSE303070/GSM9117099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117100,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1889,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117100,,,val,sda-all,samples/GSE303070/GSM9117100,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117101,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2714,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117101,,,val,sda-all,samples/GSE303070/GSM9117101,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9117102,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1550,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117102,,,val,sda-all,samples/GSE303070/GSM9117102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 0.66}",,
GSM9117103,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1786,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117103,,,val,sda-all,samples/GSE303070/GSM9117103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 0.91}",,
GSM9117104,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2429,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117104,,,val,sda-all,samples/GSE303070/GSM9117104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117105,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2653,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117105,,,val,sda-all,samples/GSE303070/GSM9117105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117106,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1793,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117106,,,val,sda-all,samples/GSE303070/GSM9117106,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117107,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2105,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117107,,,val,sda-all,samples/GSE303070/GSM9117107,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117108,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1640,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117108,,,val,sda-all,samples/GSE303070/GSM9117108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 0.98}",,
GSM9117109,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,2243,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117109,,,val,sda-all,samples/GSE303070/GSM9117109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 0.98}",,
GSM9117110,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2442,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117110,,,val,sda-all,samples/GSE303070/GSM9117110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117111,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2215,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117111,,,val,sda-all,samples/GSE303070/GSM9117111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9117112,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1798,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117112,,,val,sda-all,samples/GSE303070/GSM9117112,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117113,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3962,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117113,,,val,sda-all,samples/GSE303070/GSM9117113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117114,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1868,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117114,,,val,sda-all,samples/GSE303070/GSM9117114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 0.9500000000000001}",,
GSM9117115,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,2350,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117115,,,val,sda-all,samples/GSE303070/GSM9117115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 0.6000000000000001}",,
GSM9117116,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2488,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117116,,,val,sda-all,samples/GSE303070/GSM9117116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117117,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2261,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117117,,,val,sda-all,samples/GSE303070/GSM9117117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117118,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1831,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117118,,,val,sda-all,samples/GSE303070/GSM9117118,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117119,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3814,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117119,,,val,sda-all,samples/GSE303070/GSM9117119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117120,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1688,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117120,,,val,sda-all,samples/GSE303070/GSM9117120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.73, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM9117121,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,2103,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117121,,,val,sda-all,samples/GSE303070/GSM9117121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.81, ""life_stage"": 0.62}",,
GSM9117122,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2752,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117122,,,val,sda-all,samples/GSE303070/GSM9117122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117123,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2276,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117123,,,val,sda-all,samples/GSE303070/GSM9117123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117124,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1952,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117124,,,val,sda-all,samples/GSE303070/GSM9117124,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117125,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2225,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor137,Donor137,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117125,,,val,sda-all,samples/GSE303070/GSM9117125,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117126,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1887,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117126,,,val,sda-all,samples/GSE303070/GSM9117126,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 0.88}",,
GSM9117127,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,juvenile,male,CosMx,CosMx,False,,2082,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,juvenile,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117127,,,val,sda-all,samples/GSE303070/GSM9117127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9117128,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2912,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117128,,,val,sda-all,samples/GSE303070/GSM9117128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117129,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2288,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117129,,,val,sda-all,samples/GSE303070/GSM9117129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117130,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1687,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117130,,,val,sda-all,samples/GSE303070/GSM9117130,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117131,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2085,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117131,,,val,sda-all,samples/GSE303070/GSM9117131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117132,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1969,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117132,,,val,sda-all,samples/GSE303070/GSM9117132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 0.92}",,
GSM9117133,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,2178,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117133,,,val,sda-all,samples/GSE303070/GSM9117133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 0.98}",,
GSM9117134,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2730,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117134,,,val,sda-all,samples/GSE303070/GSM9117134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117135,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2290,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117135,,,val,sda-all,samples/GSE303070/GSM9117135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117136,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2240,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117136,,,val,sda-all,samples/GSE303070/GSM9117136,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9117137,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,4920,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117137,,,val,sda-all,samples/GSE303070/GSM9117137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117138,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1809,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117138,,,val,sda-all,samples/GSE303070/GSM9117138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 0.98}",,
GSM9117139,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,3791,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117139,,,val,sda-all,samples/GSE303070/GSM9117139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 0.91}",,
GSM9117140,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,2144,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117140,,,val,sda-all,samples/GSE303070/GSM9117140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM9117141,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2976,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117141,,,val,sda-all,samples/GSE303070/GSM9117141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117142,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1661,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117142,,,val,sda-all,samples/GSE303070/GSM9117142,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9117143,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3793,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117143,,,val,sda-all,samples/GSE303070/GSM9117143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117144,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,juvenile,male,CosMx,CosMx,False,,1458,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,juvenile,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117144,,,val,sda-all,samples/GSE303070/GSM9117144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9117145,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1880,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117145,,,val,sda-all,samples/GSE303070/GSM9117145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 0.93}",,
GSM9117146,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2750,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117146,,,val,sda-all,samples/GSE303070/GSM9117146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9117147,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2415,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117147,,,val,sda-all,samples/GSE303070/GSM9117147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117148,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1847,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117148,,,val,sda-all,samples/GSE303070/GSM9117148,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9117149,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,4015,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117149,,,val,sda-all,samples/GSE303070/GSM9117149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117150,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1778,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117150,,,val,sda-all,samples/GSE303070/GSM9117150,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.9500000000000001}",,
GSM9117151,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,2493,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117151,,,val,sda-all,samples/GSE303070/GSM9117151,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 0.98}",,
GSM9117152,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1931,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117152,,,val,sda-all,samples/GSE303070/GSM9117152,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM9117153,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1514,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117153,,,val,sda-all,samples/GSE303070/GSM9117153,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117154,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2603,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117154,,,val,sda-all,samples/GSE303070/GSM9117154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117155,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2174,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117155,,,val,sda-all,samples/GSE303070/GSM9117155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117156,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2677,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117156,,,val,sda-all,samples/GSE303070/GSM9117156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.8, ""uberon"": 0.65, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117157,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2110,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117157,,,val,sda-all,samples/GSE303070/GSM9117157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117158,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2240,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117158,,,val,sda-all,samples/GSE303070/GSM9117158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9117159,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2174,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117159,,,val,sda-all,samples/GSE303070/GSM9117159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117160,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2584,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117160,,,val,sda-all,samples/GSE303070/GSM9117160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.67}",,
GSM9117161,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2143,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117161,,,val,sda-all,samples/GSE303070/GSM9117161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117162,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3604,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117162,,,val,sda-all,samples/GSE303070/GSM9117162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117163,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,4914,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117163,,,val,sda-all,samples/GSE303070/GSM9117163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117164,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1419,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117164,,,val,sda-all,samples/GSE303070/GSM9117164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 0.99}",,
GSM9117165,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1377,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117165,,,val,sda-all,samples/GSE303070/GSM9117165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9117166,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2238,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117166,,,val,sda-all,samples/GSE303070/GSM9117166,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9117167,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1642,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117167,,,val,sda-all,samples/GSE303070/GSM9117167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117168,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2017,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117168,,,val,sda-all,samples/GSE303070/GSM9117168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117169,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,5175,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117169,,,val,sda-all,samples/GSE303070/GSM9117169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117170,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2256,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117170,,,val,sda-all,samples/GSE303070/GSM9117170,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9117171,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2188,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117171,,,val,sda-all,samples/GSE303070/GSM9117171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117172,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2130,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117172,,,val,sda-all,samples/GSE303070/GSM9117172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117173,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3063,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117173,,,val,sda-all,samples/GSE303070/GSM9117173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117174,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2227,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor130,Donor130,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117174,,,val,sda-all,samples/GSE303070/GSM9117174,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9117175,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2325,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117175,,,val,sda-all,samples/GSE303070/GSM9117175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117176,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2569,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117176,,,val,sda-all,samples/GSE303070/GSM9117176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117177,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1922,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117177,,,val,sda-all,samples/GSE303070/GSM9117177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117178,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2337,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117178,,,val,sda-all,samples/GSE303070/GSM9117178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117179,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2142,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117179,,,val,sda-all,samples/GSE303070/GSM9117179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9117180,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2421,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117180,,,val,sda-all,samples/GSE303070/GSM9117180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117181,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3518,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117181,,,val,sda-all,samples/GSE303070/GSM9117181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117182,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2394,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117182,,,val,sda-all,samples/GSE303070/GSM9117182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117183,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1830,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117183,,,val,sda-all,samples/GSE303070/GSM9117183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117184,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2272,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117184,,,val,sda-all,samples/GSE303070/GSM9117184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9117185,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3249,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117185,,,val,sda-all,samples/GSE303070/GSM9117185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117186,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2115,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor92,Donor92,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117186,,,val,sda-all,samples/GSE303070/GSM9117186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117187,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2059,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117187,,,val,sda-all,samples/GSE303070/GSM9117187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117188,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2108,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117188,,,val,sda-all,samples/GSE303070/GSM9117188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117189,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2008,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117189,,,val,sda-all,samples/GSE303070/GSM9117189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117190,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2162,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117190,,,val,sda-all,samples/GSE303070/GSM9117190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9117191,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2119,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117191,,,val,sda-all,samples/GSE303070/GSM9117191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117192,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2392,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117192,,,val,sda-all,samples/GSE303070/GSM9117192,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117193,colon,disease,colonic neoplasm;colorectal cancer,ascending colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2153,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001156,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117193,,,val,sda-all,samples/GSE303070/GSM9117193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117194,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2241,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117194,,,val,sda-all,samples/GSE303070/GSM9117194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117195,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1909,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117195,,,val,sda-all,samples/GSE303070/GSM9117195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9117196,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2053,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117196,,,val,sda-all,samples/GSE303070/GSM9117196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117197,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2760,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117197,,,val,sda-all,samples/GSE303070/GSM9117197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117198,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1623,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117198,,,val,sda-all,samples/GSE303070/GSM9117198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117199,colon,disease,colonic neoplasm;colorectal cancer,colon,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3433,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117199,,,val,sda-all,samples/GSE303070/GSM9117199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.4, ""uberon"": 0.61, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9117200,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2422,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117200,,,val,sda-all,samples/GSE303070/GSM9117200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9117201,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2006,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117201,,,val,sda-all,samples/GSE303070/GSM9117201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9117202,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2928,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117202,,,val,sda-all,samples/GSE303070/GSM9117202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117203,colon,disease,colonic neoplasm;colorectal cancer,hepatic flexure of colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2405,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0022277,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor46,Donor46,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117203,,,val,sda-all,samples/GSE303070/GSM9117203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9117204,rectum,disease,colonic neoplasm;colorectal cancer,rectum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2392,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor278,Donor278,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117204,,,val,sda-all,samples/GSE303070/GSM9117204,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9117205,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1267,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117205,,,val,sda-all,samples/GSE303070/GSM9117205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM9117206,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1706,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117206,,,val,sda-all,samples/GSE303070/GSM9117206,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117207,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2209,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117207,,,val,sda-all,samples/GSE303070/GSM9117207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117208,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2223,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117208,,,val,sda-all,samples/GSE303070/GSM9117208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9117209,colon,disease,colonic neoplasm;colorectal cancer,colon,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3049,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117209,,,val,sda-all,samples/GSE303070/GSM9117209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.41000000000000003, ""uberon"": 0.64, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9117210,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2262,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117210,,,val,sda-all,samples/GSE303070/GSM9117210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117211,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2272,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117211,,,val,sda-all,samples/GSE303070/GSM9117211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117212,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2734,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117212,,,val,sda-all,samples/GSE303070/GSM9117212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117213,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,2110,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor73,Donor73,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117213,,,val,sda-all,samples/GSE303070/GSM9117213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 0.9500000000000001}",,
GSM9117214,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1609,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117214,,,val,sda-all,samples/GSE303070/GSM9117214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM9117215,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1836,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117215,,,val,sda-all,samples/GSE303070/GSM9117215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9117216,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3266,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117216,,,val,sda-all,samples/GSE303070/GSM9117216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117217,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2531,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117217,,,val,sda-all,samples/GSE303070/GSM9117217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117218,colon,disease,colonic neoplasm;colorectal cancer,colon,primary tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,3107,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor170,Donor170,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117218,,,val,sda-all,samples/GSE303070/GSM9117218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.64, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117219,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2513,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117219,,,val,sda-all,samples/GSE303070/GSM9117219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9117220,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1514,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117220,,,val,sda-all,samples/GSE303070/GSM9117220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9117221,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,4280,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117221,,,val,sda-all,samples/GSE303070/GSM9117221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117222,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1867,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117222,,,val,sda-all,samples/GSE303070/GSM9117222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9117223,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,2188,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117223,,,val,sda-all,samples/GSE303070/GSM9117223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9117224,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3191,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117224,,,val,sda-all,samples/GSE303070/GSM9117224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117225,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2551,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117225,,,val,sda-all,samples/GSE303070/GSM9117225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9117226,colon,disease,colorectal cancer;colonic disorder,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3093,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005575;MONDO:0003409,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117226,,,val,sda-all,samples/GSE303070/GSM9117226,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 0.61, ""uberon"": 0.75, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9117227,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,1887,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117227,,,val,sda-all,samples/GSE303070/GSM9117227,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117228,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2370,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117228,,,val,sda-all,samples/GSE303070/GSM9117228,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9117229,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,4226,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117229,,,val,sda-all,samples/GSE303070/GSM9117229,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117230,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,3366,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117230,,,val,sda-all,samples/GSE303070/GSM9117230,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117231,colon,disease,colonic neoplasm;colorectal cancer,descending colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,1704,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001158,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor74,Donor74,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117231,,,val,sda-all,samples/GSE303070/GSM9117231,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.77}",,
GSM9117232,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,1990,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor280,Donor280,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117232,,,val,sda-all,samples/GSE303070/GSM9117232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117233,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2112,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,not stated,,not stated,,,,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117233,,,val,sda-all,samples/GSE303070/GSM9117233,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9117234,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,2323,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,1207,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117234,,,val,sda-all,samples/GSE303070/GSM9117234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9117235,colon,disease,colonic neoplasm;colorectal cancer,colon,primary tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3207,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor7,Donor7,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117235,,,val,sda-all,samples/GSE303070/GSM9117235,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.71, ""disease_status"": 0.53, ""uberon"": 0.64, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9117236,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,aged,female,CosMx,CosMx,False,,2009,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,F,GSE303070:Donor142,Donor142,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117236,,,val,sda-all,samples/GSE303070/GSM9117236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9117237,colon,disease,colonic neoplasm;colorectal cancer,colon,tumour tissue,Homo sapiens,human,adult,male,CosMx,CosMx,False,,1553,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,M,GSE303070:Donor67,Donor67,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117237,,,val,sda-all,samples/GSE303070/GSM9117237,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 0.99}",,
GSM9117238,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,aged,male,CosMx,CosMx,False,,3153,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,aged,,extracted field,M,GSE303070:Donor118,Donor118,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117238,,,val,sda-all,samples/GSE303070/GSM9117238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9117239,colon,disease,colonic neoplasm;colorectal cancer,caecum,tumour tissue,Homo sapiens,human,adult,female,CosMx,CosMx,False,,4426,A spatial atlas of colorectal cancer reveals the influence of stromal niches on tumour differentiation,GSE303070,GSE303070,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001153,"Colon tumour,FFPE",MONDO:0005401;MONDO:0005575,luna,,,luna,adult,,extracted field,F,GSE303070:Donor64,Donor64,FFPE,formalin fixed paraffin embedded,release v3,imaging-based,CosMx,,,cell,979,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9117239,,,val,sda-all,samples/GSE303070/GSM9117239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9119669,lung,disease,lung cancer,lobe of lung,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1858,A novel CAF population coordinates hyper-suppressive regulatory T cell recruitment and localization in lung cancer [Spatial Transcriptomics],GSE303162,GSE303162+GSE303166,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000101,Lung,MONDO:0008903,luna,,C57B6J,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.375420575746022,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42581185,,GSM9119669,,,train,sda-all,samples/GSE303162/GSM9119669,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.74, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9119670,lung,disease,lung cancer,lung,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2697,A novel CAF population coordinates hyper-suppressive regulatory T cell recruitment and localization in lung cancer [Spatial Transcriptomics],GSE303162,GSE303162+GSE303166,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0008903,luna,,C57B6J,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.381088199956986,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42581185,,GSM9119670,,,train,sda-all,samples/GSE303162/GSM9119670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 1.0, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9128541,prostate,disease,prostate cancer,prostate gland,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2936,Inhibition of HIF1 signaling as a therapeutic option for metastatic castration-resistant prostate cancer.,GSE303530,GSE303530,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002367,prostate,MONDO:0008315,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.827803279007619,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41896221,,GSM9128541,,,train,sda-all,samples/GSE303530/GSM9128541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9130427,lymph node,disease,lymph node disorder;follicular lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,582846,Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma [VisiumHD],GSE303546,GSE303546,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Lymph Node,MONDO:0004928;MONDO:0018906,luna,admixed FL and tFL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,3.8599806360949565,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9130427,,,test,sda-all,samples/GSE303546/GSM9130427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9130428,lymph node,disease,lymph node disorder;follicular lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,701837,Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma [VisiumHD],GSE303546,GSE303546,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Lymph Node,MONDO:0004928;MONDO:0018906,luna,admixed FL and tFL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,3.808561369496922,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9130428,,,test,sda-all,samples/GSE303546/GSM9130428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9130429,lymph node,disease,lymph node disorder;follicular lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,625873,Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma [VisiumHD],GSE303546,GSE303546,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Lymph Node,MONDO:0004928;MONDO:0018906,luna,admixed FL and tFL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,4.110354230625786,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9130429,,,test,sda-all,samples/GSE303546/GSM9130429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9130430,lymph node,disease,lymph node disorder;follicular lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,631346,Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma [VisiumHD],GSE303546,GSE303546,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Lymph Node,MONDO:0004928;MONDO:0018906,luna,admixed FL and tFL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.5879650587565313,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9130430,,,test,sda-all,samples/GSE303546/GSM9130430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9130431,lymph node,disease,lymph node disorder;follicular lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,681787,Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma [VisiumHD],GSE303546,GSE303546,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Lymph Node,MONDO:0004928;MONDO:0018906,luna,admixed FL and tFL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,4.520696008095351,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9130431,,,test,sda-all,samples/GSE303546/GSM9130431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9134407,small intestine,perturbation,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,415262,A Spatial and Temporal Transcriptomic Atlas of Mouse Intestinal Regeneration in the Jejunum,GSE303705,GSE303705,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum of small intestine,,luna,,"Day 0, Day 0, Day 1, Day 3, Day 5 post-IR",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19059,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9134407,,,val,hesrt,samples/GSE303705/GSM9134407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9134408,small intestine,perturbation,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,397346,A Spatial and Temporal Transcriptomic Atlas of Mouse Intestinal Regeneration in the Jejunum,GSE303705,GSE303705,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum of small intestine,,luna,,"Day 0, Day 1, Day 2, Day 3, Day 4, Day 5 post-IR",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19059,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9134408,,,val,hesrt,samples/GSE303705/GSM9134408,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9134409,small intestine,perturbation,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,398382,A Spatial and Temporal Transcriptomic Atlas of Mouse Intestinal Regeneration in the Jejunum,GSE303705,GSE303705,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum of small intestine,,luna,,"Day 0, Day 1, Day 2, Day 3, Day 4, Day 5 post-IR (rep3)",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19059,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9134409,,,val,hesrt,samples/GSE303705/GSM9134409,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9134410,small intestine,perturbation,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,433274,A Spatial and Temporal Transcriptomic Atlas of Mouse Intestinal Regeneration in the Jejunum,GSE303705,GSE303705,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum of small intestine,,luna,,"Day 0, Day 1, Day 2, Day 3, Day 4, Day 5 post-IR (rep4)",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19059,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9134410,,,val,hesrt,samples/GSE303705/GSM9134410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9135513,placenta,disease,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),3201,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,GPCMV-infected,luna,fetal,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,4.913027310586708,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135513,,,test,sda-all,samples/GSE303764/GSM9135513,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM9135514,placenta,disease,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1942,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,GPCMV-infected,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,4.3180755533777395,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135514,,,test,sda-all,samples/GSE303764/GSM9135514,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9135515,placenta,normal,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1967,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,Mock-infected,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,4.2057383226824125,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135515,,,test,sda-all,samples/GSE303764/GSM9135515,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",disease_status,low_confidence_annotation
GSM9135516,placenta,normal,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2583,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,Mock-infected,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,4.332160721111343,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135516,,,test,sda-all,samples/GSE303764/GSM9135516,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9135517,placenta,disease,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3317,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,GPCMV-infected,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,4.668131156785954,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135517,,,test,sda-all,samples/GSE303764/GSM9135517,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM9135518,placenta,disease,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),3244,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,GPCMV-infected,luna,fetal,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,4.711429607729054,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135518,,,test,sda-all,samples/GSE303764/GSM9135518,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9135519,placenta,normal,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),3886,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,Mock-infected,luna,fetal,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,5.054009710139136,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),stain intensity varies,,,GSM9135519,,,test,sda-all,samples/GSE303764/GSM9135519,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9135520,placenta,normal,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2027,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,Mock-infected,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,5.080804218115566,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135520,,,test,sda-all,samples/GSE303764/GSM9135520,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9135521,placenta,disease,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,fetal,unknown,Visium,Visium,True,H&E-like (heuristic),2742,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,GPCMV-infected,luna,fetal,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,4.90439536006248,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135521,,,test,sda-all,samples/GSE303764/GSM9135521,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9135522,placenta,disease,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2877,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,GPCMV-infected,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,4.697426552629266,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135522,,,test,sda-all,samples/GSE303764/GSM9135522,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9135523,placenta,normal,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3147,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,Mock-infected,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,4.495443547522186,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),stain intensity varies,,,GSM9135523,,,test,sda-all,samples/GSE303764/GSM9135523,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM9135524,placenta,normal,,placenta,primary tissue,Cavia porcellus,domestic guinea pig,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3681,Spatial transcriptomics of the normal and cytomegalovirus-infected guinea pig placenta,GSE303764,GSE303764,10141,Cavia porcellus,10141,,False,False,GEO organism field,Cavia porcellus,,luna,UBERON:0001987,Maternal-fetal interface,,luna,,Mock-infected,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,31681,counts,um,1.0,verified,4.524137325622574,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9135524,,,test,sda-all,samples/GSE303764/GSM9135524,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.42}",disease_status;life_stage,low_confidence_annotation
GSM9136265,other,normal,,,primary tissue,Homo sapiens,human,fetal,unknown,MERFISH/MERSCOPE,MERFISH,False,,65924,A Single-Cell and Spatial Atlas of Early Human Olfactory Development,GSE303809,GSE303809,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,,luna,,,age rule: post-conception / gestational weeks,fetal,PGW9,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,Merfish,,,cell,315,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41997969,,GSM9136265,,,train,sda-all,samples/GSE303809/GSM9136265,sda-tissue-disease-2.3,"{""organ"": 0.36, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM9136266,head and neck,normal,,head,primary tissue,Homo sapiens,human,fetal,unknown,MERFISH/MERSCOPE,MERFISH,False,,80178,A Single-Cell and Spatial Atlas of Early Human Olfactory Development,GSE303809,GSE303809,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000033,,,luna,,,age rule: post-conception / gestational weeks,fetal,PGW9,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,Merfish,,,cell,315,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41997969,,GSM9136266,,,train,sda-all,samples/GSE303809/GSM9136266,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.74, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM9136267,embryo (whole),normal,,embryo,primary tissue,Homo sapiens,human,fetal,unknown,MERFISH/MERSCOPE,MERFISH,False,,58313,A Single-Cell and Spatial Atlas of Early Human Olfactory Development,GSE303809,GSE303809,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000922,,,luna,,,age rule: post-conception / gestational weeks,fetal,PGW9,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,Merfish,,,cell,315,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41997969,,GSM9136267,,,train,sda-all,samples/GSE303809/GSM9136267,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9136268,other,normal,,,primary tissue,Homo sapiens,human,fetal,unknown,MERFISH/MERSCOPE,MERFISH,False,,317814,A Single-Cell and Spatial Atlas of Early Human Olfactory Development,GSE303809,GSE303809,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,,luna,,,age rule: post-conception / gestational weeks,fetal,PGW9,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,Merfish,,,cell,315,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41997969,,GSM9136268,,,train,sda-all,samples/GSE303809/GSM9136268,sda-tissue-disease-2.3,"{""organ"": 0.24, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 0.87}",organ,low_confidence_annotation
GSM9136269,unknown,normal,,,primary tissue,Homo sapiens,human,fetal,unknown,MERFISH/MERSCOPE,MERFISH,False,,146212,A Single-Cell and Spatial Atlas of Early Human Olfactory Development,GSE303809,GSE303809,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,,,luna,,,age rule: post-conception / gestational weeks,fetal,PGW11,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,Merfish,,,cell,315,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,41997969,,GSM9136269,,,train,sda-all,samples/GSE303809/GSM9136269,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 0.93}",organ,low_confidence_annotation
GSM9138356,placenta,normal,,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4335,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,GSE303933,GSE303933,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,placenta,,luna,,Well-grown (non FGR),luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.969545442557118,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138356,,,train,sda-all,samples/GSE303933/GSM9138356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9138357,placenta,disease,,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4791,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,GSE303933,GSE303933,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,placenta,,luna,,Growth restricted (FGR),luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.930560781298076,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138357,,,train,sda-all,samples/GSE303933/GSM9138357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9138358,placenta,normal,,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4961,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,GSE303933,GSE303933,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,placenta,,luna,,Well-grown (non FGR),luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.977224193538518,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138358,,,train,sda-all,samples/GSE303933/GSM9138358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM9138359,placenta,disease,,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4982,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,GSE303933,GSE303933,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,placenta,,luna,,Growth restricted (FGR),luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.031750386098033,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138359,,,train,sda-all,samples/GSE303933/GSM9138359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 0.67}",,
GSM9138360,placenta,normal,,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4992,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,GSE303933,GSE303933,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,placenta,,luna,,Well-grown (non FGR),luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.0372860674013555,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138360,,,train,sda-all,samples/GSE303933/GSM9138360,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.71}",,
GSM9138361,placenta,disease,,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4053,Obstetric complications in pregnant people with Fontan Circulation: identifying candidate pathologic pathways in the placenta,GSE303933,GSE303933,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,placenta,,luna,,Growth restricted (FGR),luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.9527286327423505,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42597080,,GSM9138361,,,train,sda-all,samples/GSE303933/GSM9138361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9143736,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,False,,44347,Spatial transcriptomics analysis of mouse liver tissue during Alcohol-associated liver disease development and resolution,GSE304111,GSE304111,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,MONDO:0005154,luna,,,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9143736,,,train,sda-all,samples/GSE304111/GSM9143736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9144067,oral cavity,disease,Keratocystic odontogenic tumor,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),724,Mapping Cellular Senescence in Human Dental Follicle and Odontogenic Keratocyst,GSE304124,GSE304124,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Fresh frozen odontogenic keratocyst tissue,MONDO:0018648,luna,,no treatment,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.103808316358437,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42123694,,GSM9144067,,,train,sda-all,samples/GSE304124/GSM9144067,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9144566,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,unknown,CosMx,CosMx,False,,73622,Targeting CyclinD1-CDK6 to Mitigate Senescence-Driven Inflammation and Age Associated Functional Decline,GSE304160,GSE304160,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,,luna,aged,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1194,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40766702;41509421,,GSM9144566,,,train,sda-all,samples/GSE304160/GSM9144566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 0.52}",disease_status;life_stage,low_confidence_annotation
GSM9144567,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,85783,Targeting CyclinD1-CDK6 to Mitigate Senescence-Driven Inflammation and Age Associated Functional Decline,GSE304160,GSE304160,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1194,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40766702;41509421,,GSM9144567,,,train,sda-all,samples/GSE304160/GSM9144567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM9144568,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,86926,Targeting CyclinD1-CDK6 to Mitigate Senescence-Driven Inflammation and Age Associated Functional Decline,GSE304160,GSE304160,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1194,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40766702;41509421,,GSM9144568,,,train,sda-all,samples/GSE304160/GSM9144568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM9144569,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,74685,Targeting CyclinD1-CDK6 to Mitigate Senescence-Driven Inflammation and Age Associated Functional Decline,GSE304160,GSE304160,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1194,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40766702;41509421,,GSM9144569,,,train,sda-all,samples/GSE304160/GSM9144569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 0.44}",disease_status;life_stage,low_confidence_annotation
GSM9151611,eye,perturbation,,right eye,primary tissue,Macaca mulatta,Rhesus monkey,adult,male,Visium,Visium,True,H&E,295,Single-cell and spatial transcriptomic analyses of gene therapy-associated retinal inflammation in non-human primates,GSE304504,GSE304504,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0004549,Posterior eyecup,,luna,,AAV2-CAG-hRPE65,luna,adult,5 years,extracted field,male,GSE304504:NHP1,NHP1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26533,counts,pixel,1.730062378523607,platform_constant,1.730062378523607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42137601,,GSM9151611,,,test,hesrt,samples/GSE304504/GSM9151611,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.47000000000000003, ""life_stage"": 0.87}",uberon,low_confidence_annotation
GSM9151612,eye,normal,,right eye,primary tissue,Macaca mulatta,Rhesus monkey,adult,male,Visium,Visium,True,H&E,534,Single-cell and spatial transcriptomic analyses of gene therapy-associated retinal inflammation in non-human primates,GSE304504,GSE304504,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0004549,Posterior eyecup,,luna,,Uninjected,luna,adult,5 years,extracted field,male,GSE304504:NHP1,NHP1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26533,counts,pixel,1.730062378523607,platform_constant,1.730062378523607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42137601,,GSM9151612,,,test,hesrt,samples/GSE304504/GSM9151612,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.26, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM9151613,eye,perturbation,,right eye,primary tissue,Macaca mulatta,Rhesus monkey,adult,male,Visium,Visium,True,H&E,514,Single-cell and spatial transcriptomic analyses of gene therapy-associated retinal inflammation in non-human primates,GSE304504,GSE304504,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0004549,Posterior eyecup,,luna,,AAV8-GRK1-hRPGR,luna,adult,6 years,extracted field,male,GSE304504:NHP2,NHP2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26533,counts,pixel,1.730062378523607,platform_constant,1.730062378523607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42137601,,GSM9151613,,,test,hesrt,samples/GSE304504/GSM9151613,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.64, ""life_stage"": 0.97}",,
GSM9151614,eye,normal,,right eye,primary tissue,Macaca mulatta,Rhesus monkey,adult,male,Visium,Visium,True,H&E,470,Single-cell and spatial transcriptomic analyses of gene therapy-associated retinal inflammation in non-human primates,GSE304504,GSE304504,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0004549,Posterior eyecup,,luna,,Uninjected,luna,adult,6 years,extracted field,male,GSE304504:NHP2,NHP2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,26533,counts,pixel,1.730062378523607,platform_constant,1.730062378523607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42137601,,GSM9151614,,,test,hesrt,samples/GSE304504/GSM9151614,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.28, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9152863,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2480,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],GSE304561,GSE304561,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,58,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.90267315280452,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152863,,,train,sda-all,samples/GSE304561/GSM9152863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9152864,lung,normal,,lung,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2433,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],GSE304561,GSE304561,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,aged,73,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9215470177186464,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152864,,,train,sda-all,samples/GSE304561/GSM9152864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9152865,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1234,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],GSE304561,GSE304561,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,45,extracted field,female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.114786091105509,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152865,,,train,sda-all,samples/GSE304561/GSM9152865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9152866,lung,normal,,lung,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3465,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],GSE304561,GSE304561,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,aged,72,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.063583455861538,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152866,,,train,sda-all,samples/GSE304561/GSM9152866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9152867,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,1871,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],GSE304561,GSE304561,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,57,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.94900436372168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152867,,,train,sda-all,samples/GSE304561/GSM9152867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9152868,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3485,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],GSE304561,GSE304561,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,57,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.055388210329012,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152868,,,train,sda-all,samples/GSE304561/GSM9152868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9152869,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2591,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [scRNA-seq],GSE304561,GSE304561,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,62,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9738563116891426,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9152869,,,train,sda-all,samples/GSE304561/GSM9152869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9155022,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1052,Spatial transcriptomics reveals distinct role of monocytes/macrophages with high FCGR3A expression in kidney transplant rejections,GSE304669,GSE304669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney allograft biopsy tissue,,luna,,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18061,counts,pixel,6.497887774507204,platform_constant,6.497887774507204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41030449,,GSM9155022,,,val,hesrt,samples/GSE304669/GSM9155022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9155023,kidney,disease,transplant rejection,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1348,Spatial transcriptomics reveals distinct role of monocytes/macrophages with high FCGR3A expression in kidney transplant rejections,GSE304669,GSE304669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney allograft biopsy tissue,MONDO:1010185,luna,,active AMR,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18061,counts,pixel,5.198064834750562,platform_constant,5.198064834750562,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41030449,,GSM9155023,,,val,hesrt,samples/GSE304669/GSM9155023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9155024,kidney,disease,transplant rejection,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,992,Spatial transcriptomics reveals distinct role of monocytes/macrophages with high FCGR3A expression in kidney transplant rejections,GSE304669,GSE304669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney allograft biopsy tissue,MONDO:1010185,luna,,acute TCMR,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18061,counts,pixel,5.177104462707727,platform_constant,5.177104462707727,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41030449,,GSM9155024,,,val,hesrt,samples/GSE304669/GSM9155024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9155025,kidney,disease,transplant rejection,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1129,Spatial transcriptomics reveals distinct role of monocytes/macrophages with high FCGR3A expression in kidney transplant rejections,GSE304669,GSE304669,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney allograft biopsy tissue,MONDO:1010185,luna,,chronic active AMR,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18061,counts,pixel,5.991509661738318,platform_constant,5.991509661738318,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41030449,,GSM9155025,,,val,hesrt,samples/GSE304669/GSM9155025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9156518,esophagus,normal,,esophagus,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,4270,Deciphering Precursor Cell Dynamics in Esophageal Preneoplasia via Genetic Barcoding and Single-Cell Transcriptomics,GSE304762,GSE304762,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001043,Normal esophagus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.4999876094498596,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41337486;42239047,,GSM9156518,,,train,sda-all,samples/GSE304762/GSM9156518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9156519,other,disease,esophageal squamous cell carcinoma,,xenograft,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,172251,Deciphering Precursor Cell Dynamics in Esophageal Preneoplasia via Genetic Barcoding and Single-Cell Transcriptomics,GSE304762,GSE304762,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,ESCC,MONDO:0005580,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000084472142964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41337486;42239047,,GSM9156519,,,train,sda-all,samples/GSE304762/GSM9156519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.87, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9157703,other,disease,diffuse gastric cancer,,xenograft,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,261111,RHOAY42C-driven cell lineage plasticity and immune remodeling of diffuse gastric cancer,GSE304811,GSE304811,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Diffuse gastric cancer,MONDO:0957519,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999920523906405,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9157703,,,train,sda-all,samples/GSE304811/GSM9157703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.96, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM9157704,other,disease,diffuse gastric cancer,,xenograft,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,255744,RHOAY42C-driven cell lineage plasticity and immune remodeling of diffuse gastric cancer,GSE304811,GSE304811,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,Diffuse gastric cancer,MONDO:0957519,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999984107812599,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9157704,,,train,sda-all,samples/GSE304811/GSM9157704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.96, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9160367,other,perturbation,,blastema,primary tissue,Dugesia japonica,,not stated,unknown,Visium,Visium,True,H&E,180,Multi-omics analyses reveal DjTcf4 critical for proper timing of differentiation in planarian regeneration,GSE304962,GSE304962,6161,Dugesia japonica,6161,,False,False,GEO organism field,Dugesia japonica,,luna,UBERON:0005306,Head blastema,,luna,,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,38792,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9160367,,,train,hesrt,samples/GSE304962/GSM9160367,sda-tissue-disease-2.4,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.9, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9160368,other,perturbation,,blastema,primary tissue,Dugesia japonica,,not stated,unknown,Visium,Visium,True,H&E,201,Multi-omics analyses reveal DjTcf4 critical for proper timing of differentiation in planarian regeneration,GSE304962,GSE304962,6161,Dugesia japonica,6161,,False,False,GEO organism field,Dugesia japonica,,luna,UBERON:0005306,Head blastema,,luna,,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,38792,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9160368,,,train,hesrt,samples/GSE304962/GSM9160368,sda-tissue-disease-2.4,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.9400000000000001, ""life_stage"": 0.48}",organ;life_stage,low_confidence_annotation
GSM9160369,other,perturbation,,blastema,primary tissue,Dugesia japonica,,adult,unknown,Visium,Visium,True,H&E,402,Multi-omics analyses reveal DjTcf4 critical for proper timing of differentiation in planarian regeneration,GSE304962,GSE304962,6161,Dugesia japonica,6161,,False,False,GEO organism field,Dugesia japonica,,luna,UBERON:0005306,Head blastema,,luna,,WT,luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,38792,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9160369,,,train,hesrt,samples/GSE304962/GSM9160369,sda-tissue-disease-2.4,"{""organ"": 0.55, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.96, ""life_stage"": 0.37}",organ;life_stage,low_confidence_annotation
GSM9160370,other,perturbation,,blastema,primary tissue,Dugesia japonica,,not stated,unknown,Visium,Visium,True,H&E,433,Multi-omics analyses reveal DjTcf4 critical for proper timing of differentiation in planarian regeneration,GSE304962,GSE304962,6161,Dugesia japonica,6161,,False,False,GEO organism field,Dugesia japonica,,luna,UBERON:0005306,Head blastema,,luna,,WT,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,38792,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9160370,,,train,hesrt,samples/GSE304962/GSM9160370,sda-tissue-disease-2.4,"{""organ"": 0.5, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.9500000000000001, ""life_stage"": 0.51}",organ;life_stage,low_confidence_annotation
GSM9162384,skin,normal,,zone of skin,primary tissue,Sus scrofa,pig,neonatal or infant,unknown,Stereo-seq,Stereo-seq,False,,6054,Rete ridges form via evolutionarily distinct mechanisms in mammalian skin,GSE305111,GSE305111,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0000014,Dorsal skin,,luna,,WT,luna,neonatal or infant,,not stated,,,,fixed frozen,Fixed-frozen,release v3,sequencing-based,Stereo-seq,,,bin,25897,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41639458,,GSM9162384,,,train,sda-all,samples/GSE305111/GSM9162384,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 0.72}",uberon,low_confidence_annotation
GSM9162385,skin,normal,,zone of skin,primary tissue,Sus scrofa,pig,neonatal or infant,unknown,Stereo-seq,Stereo-seq,False,,13609,Rete ridges form via evolutionarily distinct mechanisms in mammalian skin,GSE305111,GSE305111,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0000014,Dorsal skin,,luna,,WT,luna,neonatal or infant,,not stated,,,,fixed frozen,Fixed-frozen,release v3,sequencing-based,Stereo-seq,,,bin,29824,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41639458,,GSM9162385,,,train,sda-all,samples/GSE305111/GSM9162385,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.78, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9162386,skin,normal,,zone of skin,primary tissue,Sus scrofa,pig,adult,unknown,Stereo-seq,Stereo-seq,False,,13986,Rete ridges form via evolutionarily distinct mechanisms in mammalian skin,GSE305111,GSE305111,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,Sus scrofa,luna,UBERON:0000014,Dorsal skin,,luna,,WT,luna,adult,,not stated,,,,fixed frozen,Fixed-frozen,release v3,sequencing-based,Stereo-seq,,,bin,30495,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41639458,,GSM9162386,,,train,sda-all,samples/GSE305111/GSM9162386,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 0.71}",uberon,low_confidence_annotation
GSM9162435,stomach,disease,gastric cancer,mucosa of stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2501,Spatial transcriptomics reveals distinct immune microenvironment characteristics between intestinal-type gastric cancer and paired normal gastric mucosa.,GSE305116,GSE305116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001199,Gastric cancer and matched normal gastric mucosa tissues,MONDO:0001056,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,37487,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41734377,,GSM9162435,,,val,sda-all,samples/GSE305116/GSM9162435,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.49, ""disease_status"": 0.97, ""uberon"": 0.89, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9162436,stomach,disease,gastric cancer,mucosa of stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3274,Spatial transcriptomics reveals distinct immune microenvironment characteristics between intestinal-type gastric cancer and paired normal gastric mucosa.,GSE305116,GSE305116,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001199,Gastric cancer and matched normal gastric mucosa tissues,MONDO:0001056,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,37487,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41734377,,GSM9162436,,,val,sda-all,samples/GSE305116/GSM9162436,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.52, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9168623,brain,disease,Alzheimer disease,brain,primary tissue,Rattus norvegicus,Norway rat,adult,female,Visium,Visium,True,H&E,7451,Intercellular signaling and synaptic deconstruction uncovered by single-cell and spatial transcriptomics in an AD tauopathy model,GSE305314,GSE305314,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,Tau transgenic,age rule: age with unit,adult,10 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.784812320210513,platform_constant,4.784812320210513,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249845,,GSM9168623,,,train,hesrt,samples/GSE305314/GSM9168623,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9168624,brain,normal,,brain,primary tissue,Rattus norvegicus,Norway rat,adult,female,Visium,Visium,True,H&E,7036,Intercellular signaling and synaptic deconstruction uncovered by single-cell and spatial transcriptomics in an AD tauopathy model,GSE305314,GSE305314,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Mus musculus,luna,UBERON:0000955,brain,,luna,,wild type,age rule: age with unit,adult,10 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.871362724293727,platform_constant,4.871362724293727,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249845,,GSM9168624,,,train,hesrt,samples/GSE305314/GSM9168624,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,feature_species_differs
GSM9168625,brain,disease,Alzheimer disease,brain,primary tissue,Rattus norvegicus,Norway rat,aged,female,Visium,Visium,True,H&E,5576,Intercellular signaling and synaptic deconstruction uncovered by single-cell and spatial transcriptomics in an AD tauopathy model,GSE305314,GSE305314,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0004975,luna,,Tau transgenic,age rule: age with unit,adult,20 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.668959632635702,platform_constant,4.668959632635702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249845,,GSM9168625,,,train,hesrt,samples/GSE305314/GSM9168625,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,feature_species_differs
GSM9168626,brain,normal,,brain,primary tissue,Rattus norvegicus,Norway rat,aged,female,Visium,Visium,True,H&E,6080,Intercellular signaling and synaptic deconstruction uncovered by single-cell and spatial transcriptomics in an AD tauopathy model,GSE305314,GSE305314,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Mus musculus,luna,UBERON:0000955,brain,,luna,,wild type,age rule: age with unit,adult,20 months,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.753040553104631,platform_constant,4.753040553104631,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41249845,,GSM9168626,,,train,hesrt,samples/GSE305314/GSM9168626,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.91}",,feature_species_differs
GSM9170946,brain,disease,brain neoplasm;glioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,32953,Microbial signals in primary and metastatic brain tumors [CosMx],GSE305393,GSE305393,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Glioma tissue,MONDO:0021211;MONDO:0021042,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,6524,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41238915,,GSM9170946,,,val,sda-all,samples/GSE305393/GSM9170946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9170947,brain,disease,brain neoplasm,brain,metastasis,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,66971,Microbial signals in primary and metastatic brain tumors [CosMx],GSE305393,GSE305393,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Brain metastasis tissue,MONDO:0021211,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,6524,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41238915,,GSM9170947,,,val,sda-all,samples/GSE305393/GSM9170947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9181142,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,641682,Neutrophils and CD8+ T cells in Muscle-invasive Bladder Cancer (MIBC),GSE305629,GSE305629,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Biopsies in FFPE blocks from MIBC patient,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999994558119286,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42009646,,GSM9181142,,,train,sda-all,samples/GSE305629/GSM9181142,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9181143,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,155081,Neutrophils and CD8+ T cells in Muscle-invasive Bladder Cancer (MIBC),GSE305629,GSE305629,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Biopsies in FFPE blocks from MIBC patient,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999934646218195,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42009646,,GSM9181143,,,train,sda-all,samples/GSE305629/GSM9181143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9187667,spinal cord,disease,spinal cord injury,spinal cord,engineered tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3138,Engineered thoracic spinal cord organoids for transplantation after spinal cord injury,GSE305911,GSE305911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,Spinal cord,MONDO:0043797,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.035941294921823,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41136603,,GSM9187667,,,train,sda-all,samples/GSE305911/GSM9187667,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.34, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 0.74}",sample_kind;disease_status,low_confidence_annotation
GSM9187668,spinal cord,disease,spinal cord injury,spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2630,Engineered thoracic spinal cord organoids for transplantation after spinal cord injury,GSE305911,GSE305911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002240,Spinal cord,MONDO:0043797,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,68886,counts,um,1.0,verified,4.053224442338716,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41136603,,GSM9187668,,,train,sda-all,samples/GSE305911/GSM9187668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.36, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 0.88}",sample_kind;disease_status,low_confidence_annotation
GSM9190966,brain,perturbation,,brain,organoid,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,62476,Thyroid Hormone Promotes Fetal Neurogenesis [CosMx],GSE305978,GSE305978,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,brain organoid,,luna,,WT and MCT8 deficient,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,40906530,,GSM9190966,,,train,sda-all,samples/GSE305978/GSM9190966,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9191675,lung,disease,lung cancer,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3405,Genetic deletion of Usp22 in KRASG12D-p53-null driven mouse lung cancer [Visium],GSE306019,GSE306019,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0008903,luna,,KP,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,8.223726475175026,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42707650,,GSM9191675,,,train,sda-all,samples/GSE306019/GSM9191675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9191676,lung,disease,lung cancer,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3511,Genetic deletion of Usp22 in KRASG12D-p53-null driven mouse lung cancer [Visium],GSE306019,GSE306019,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0008903,luna,,KPU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.603060548429689,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42707650,,GSM9191676,,,train,sda-all,samples/GSE306019/GSM9191676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9193450,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,289129,Spatial transcriptomics of human FALD and normal livers,GSE306111,GSE306111,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,liver,,luna,normal,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1167,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41758081,,GSM9193450,,,test,sda-all,samples/GSE306111/GSM9193450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193451,liver,disease,liver disorder,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,241700,Spatial transcriptomics of human FALD and normal livers,GSE306111,GSE306111,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,liver,MONDO:0005154,luna,FALD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1167,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41758081,,GSM9193451,,,test,sda-all,samples/GSE306111/GSM9193451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193452,liver,disease,liver disorder,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,215573,Spatial transcriptomics of human FALD and normal livers,GSE306111,GSE306111,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,liver,MONDO:0005154,luna,FALD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1167,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41758081,,GSM9193452,,,test,sda-all,samples/GSE306111/GSM9193452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9309755,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,332223,Spatial transcriptomics of human FALD and normal livers,GSE306111,GSE306111,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1167,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41758081,,GSM9309755,,,test,sda-all,samples/GSE306111/GSM9309755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9309756,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,46979,Spatial transcriptomics of human FALD and normal livers,GSE306111,GSE306111,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1167,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41758081,,GSM9309756,,,test,sda-all,samples/GSE306111/GSM9309756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9193794,skin,disease,skin carcinoma;squamous cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,36561,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0005096,luna,,IC,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.5000171703296703,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193794,,,train,sda-all,samples/GSE306130/GSM9193794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9193795,skin,disease,skin carcinoma;basal cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,99222,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0020804,luna,,IC,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.5000167491238919,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193795,,,train,sda-all,samples/GSE306130/GSM9193795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193796,skin,disease,skin carcinoma;squamous cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,143576,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0005096,luna,,IC,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.5000117370892019,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193796,,,train,sda-all,samples/GSE306130/GSM9193796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9193797,skin,disease,skin carcinoma;squamous cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,87249,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0005096,luna,,IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.5000028227324049,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193797,,,train,sda-all,samples/GSE306130/GSM9193797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9193798,skin,disease,skin carcinoma;basal cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,190755,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0020804,luna,,IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.5000051741470048,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193798,,,train,sda-all,samples/GSE306130/GSM9193798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9193799,skin,disease,skin carcinoma;squamous cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,64284,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0005096,luna,,IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.5000077407369181,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193799,,,train,sda-all,samples/GSE306130/GSM9193799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9193800,skin,disease,skin carcinoma;squamous cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,73107,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0005096,luna,,IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.49999226086059223,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193800,,,train,sda-all,samples/GSE306130/GSM9193800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9193801,skin,disease,skin carcinoma;basal cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,116786,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0020804,luna,,IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.5000123946455131,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193801,,,train,sda-all,samples/GSE306130/GSM9193801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193802,skin,disease,skin carcinoma;basal cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,150455,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0020804,luna,,IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.4999917159109737,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193802,,,train,sda-all,samples/GSE306130/GSM9193802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9193803,skin,disease,skin carcinoma;squamous cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,92520,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0005096,luna,,IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.49999770347234984,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193803,,,train,sda-all,samples/GSE306130/GSM9193803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193804,skin,disease,skin carcinoma;squamous cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,248639,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0005096,luna,,IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.5000079557026477,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193804,,,train,sda-all,samples/GSE306130/GSM9193804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9193805,skin,disease,skin carcinoma;squamous cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,187335,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0005096,luna,,IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.49999906113865106,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193805,,,train,sda-all,samples/GSE306130/GSM9193805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9193806,skin,disease,skin carcinoma;squamous cell carcinoma;basal cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,125749,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0005096;MONDO:0020804,luna,,IC/IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.4999989085352543,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193806,,,train,sda-all,samples/GSE306130/GSM9193806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9193807,skin,disease,skin carcinoma;squamous cell carcinoma;basal cell carcinoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,247159,Spatial biology reveals macrophage dysfunction in immunosuppressed non-melanoma skin cancer [Xenium Spatial Transcriptomics],GSE306130,GSE306130,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Tumor,MONDO:0002656;MONDO:0005096;MONDO:0020804,luna,,IS,luna,not stated,,not stated,,,,,,release v3,imaging-based,XENIUM,,,cell,541,counts,um,1.0,verified,0.5000054537521815,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42556334,,GSM9193807,,,train,sda-all,samples/GSE306130/GSM9193807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9194119,blood vessel,disease,aortitis,ascending aorta,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,55867,Spatial gene expression profiling of aortitis samples.,GSE306150,GSE306150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001496,ascending aorta,MONDO:0006656,luna,Giant Cell Aortitis,,luna,not stated,,extracted field,Female,GSE306150:GCA1,GCA1,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500010294844342,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194119,,,train,sda-all,samples/GSE306150/GSM9194119,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9194120,blood vessel,disease,aortitis,ascending aorta,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,58078,Spatial gene expression profiling of aortitis samples.,GSE306150,GSE306150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001496,ascending aorta,MONDO:0006656,luna,Giant Cell Aortitis,,luna,not stated,,extracted field,Female,GSE306150:GCA1,GCA1,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998764415156505,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194120,,,train,sda-all,samples/GSE306150/GSM9194120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9194121,blood vessel,disease,aortitis,ascending aorta,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,45520,Spatial gene expression profiling of aortitis samples.,GSE306150,GSE306150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001496,ascending aorta,MONDO:0006656,luna,Giant Cell Aortitis,,luna,not stated,,extracted field,Female,GSE306150:GCA2,GCA2,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499991258359194,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194121,,,train,sda-all,samples/GSE306150/GSM9194121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9194122,blood vessel,disease,aortitis,ascending aorta,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,49028,Spatial gene expression profiling of aortitis samples.,GSE306150,GSE306150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001496,ascending aorta,MONDO:0006656,luna,Giant Cell Aortitis,,luna,not stated,,extracted field,Female,GSE306150:GCA2,GCA2,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998846695479043,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194122,,,train,sda-all,samples/GSE306150/GSM9194122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9194123,blood vessel,disease,aortitis,ascending aorta,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,38722,Spatial gene expression profiling of aortitis samples.,GSE306150,GSE306150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001496,ascending aorta,MONDO:0006656,luna,Giant Cell Aortitis,,luna,not stated,,extracted field,Female,GSE306150:GCA3,GCA3,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999016301292853,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194123,,,train,sda-all,samples/GSE306150/GSM9194123,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9194124,blood vessel,disease,aortitis,ascending aorta,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,45053,Spatial gene expression profiling of aortitis samples.,GSE306150,GSE306150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001496,ascending aorta,MONDO:0006656,luna,Giant Cell Aortitis,,luna,not stated,,extracted field,Female,GSE306150:GCA3,GCA3,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000274122807018,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194124,,,train,sda-all,samples/GSE306150/GSM9194124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9194125,blood vessel,disease,IgG4-related aortitis;aortitis,ascending aorta,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,59298,Spatial gene expression profiling of aortitis samples.,GSE306150,GSE306150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001496,ascending aorta,MONDO:0018672;MONDO:0006656,luna,IgG4-related Aortitis,,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999908670238675,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9194125,,,train,sda-all,samples/GSE306150/GSM9194125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9485373,blood vessel,disease,aortic valve stenosis,aorta,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,35491,Spatial gene expression profiling of aortitis samples.,GSE306150,GSE306150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000947,Aorta,MONDO:0042981,luna,Aortic Stenosis,,luna,not stated,,extracted field,Female,GSE306150:AS1,AS1,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9485373,,,train,sda-all,samples/GSE306150/GSM9485373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9485374,blood vessel,disease,aortic valve stenosis,aorta,primary tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,28664,Spatial gene expression profiling of aortitis samples.,GSE306150,GSE306150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000947,Aorta,MONDO:0042981,luna,Aortic Stenosis,,luna,not stated,,extracted field,Male,GSE306150:AS2,AS2,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000051402723202,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9485374,,,train,sda-all,samples/GSE306150/GSM9485374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9485375,blood vessel,disease,aortic valve stenosis,aorta,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,25952,Spatial gene expression profiling of aortitis samples.,GSE306150,GSE306150,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000947,Aorta,MONDO:0042981,luna,Aortic Stenosis,,luna,not stated,,extracted field,Female,GSE306150:AS3,AS3,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500003144654088,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41948935,,GSM9485375,,,train,sda-all,samples/GSE306150/GSM9485375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9196846,blood vessel,disease,calcinosis,aortic valve leaflet,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1573,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,GSE306288,GSE306288,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0011742,aortic valve leaflet,MONDO:0002123,luna,diseased,,age rule: bare number read as years,aged,85,extracted field,male,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.250773636138519,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9196846,,,train,sda-all,samples/GSE306288/GSM9196846,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9196847,blood vessel,disease,calcinosis,aortic valve leaflet,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1264,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,GSE306288,GSE306288,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0011742,aortic valve leaflet,MONDO:0002123,luna,diseased,,age rule: bare number read as years,aged,85,extracted field,male,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.248252316180852,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9196847,,,train,sda-all,samples/GSE306288/GSM9196847,sda-tissue-disease-2.3,"{""organ"": 0.55, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9196848,heart,disease,calcinosis,aortic valve leaflet,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1658,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,GSE306288,GSE306288,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0011742,aortic valve leaflet,MONDO:0002123,luna,diseased,,age rule: bare number read as years,aged,76,extracted field,female,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.252674145216183,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9196848,,,train,sda-all,samples/GSE306288/GSM9196848,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9196849,blood vessel,disease,calcinosis,aortic valve leaflet,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1693,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,GSE306288,GSE306288,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0011742,aortic valve leaflet,MONDO:0002123,luna,diseased,,age rule: bare number read as years,aged,76,extracted field,female,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.252107322743187,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9196849,,,train,sda-all,samples/GSE306288/GSM9196849,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759909,blood vessel,disease,calcinosis,aortic valve leaflet,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1801,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,GSE306288,GSE306288,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0011742,aortic valve leaflet,MONDO:0002123,luna,diseased,,age rule: bare number read as years,aged,75,extracted field,female,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9299475520782594,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9759909,,,train,sda-all,samples/GSE306288/GSM9759909,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759910,blood vessel,disease,calcinosis,aortic valve leaflet,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1713,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,GSE306288,GSE306288,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0011742,aortic valve leaflet,MONDO:0002123,luna,diseased,,age rule: bare number read as years,aged,80,extracted field,male,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.115703000462613,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9759910,,,train,sda-all,samples/GSE306288/GSM9759910,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759911,blood vessel,disease,calcinosis,aortic valve leaflet,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,1512,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,GSE306288,GSE306288,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0011742,aortic valve leaflet,MONDO:0002123,luna,diseased,,age rule: bare number read as years,adult,63,extracted field,female,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.986973137459267,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9759911,,,train,sda-all,samples/GSE306288/GSM9759911,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759912,heart,disease,calcinosis,aortic valve leaflet,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,1244,Spatial transcriptomic profiling of the human aortic valve reveals cellular sex differences near sites of calcification,GSE306288,GSE306288,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0011742,aortic valve leaflet,MONDO:0002123,luna,diseased,,age rule: bare number read as years,aged,82,extracted field,male,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.043655528245771,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42206364,,GSM9759912,,,train,sda-all,samples/GSE306288/GSM9759912,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9197415,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2141,Scar-associated endothelial-stellate cellular crosstalk drives fibrosis resolution in MASH [Spatial Transcriptomics],GSE306327,GSE306327,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.934974302979163,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9197415,,,test,sda-all,samples/GSE306327/GSM9197415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9197416,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),1726,Scar-associated endothelial-stellate cellular crosstalk drives fibrosis resolution in MASH [Spatial Transcriptomics],GSE306327,GSE306327,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,,,luna,juvenile,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.93490261074502,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9197416,,,test,sda-all,samples/GSE306327/GSM9197416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM9198042,small intestine,disease,ulcerative colitis,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,39445,Genetic profiles of small intestinal and colonic metaplastic Paneth cells by spatial transcriptomics,GSE306374,GSE306374,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,"terminal ileum, colon",MONDO:0005101,luna,ulcerative colitis,ulcerative colitis,luna,not stated,,not stated,,GSE306374:patient 1,patient 1,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904124,,GSM9198042,,,test,hesrt,samples/GSE306374/GSM9198042,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9198043,small intestine,disease,ulcerative colitis,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,65250,Genetic profiles of small intestinal and colonic metaplastic Paneth cells by spatial transcriptomics,GSE306374,GSE306374,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,"terminal ileum, colon",MONDO:0005101,luna,ulcerative colitis,ulcerative colitis,luna,not stated,,not stated,,GSE306374:patient 2,patient 2,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41904124,,GSM9198043,,,test,hesrt,samples/GSE306374/GSM9198043,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9202342,brain,disease,childhood medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3361,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,GSE306506,GSE306506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,"pediatric medulloblastoma, Group 3",MONDO:0002797,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.231476136709108,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202342,,,train,sda-all,samples/GSE306506/GSM9202342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.67}",,
GSM9202343,brain,disease,childhood medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3457,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,GSE306506,GSE306506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,"pediatric medulloblastoma, SHH",MONDO:0002797,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.133236405774021,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202343,,,train,sda-all,samples/GSE306506/GSM9202343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9202344,brain,disease,childhood medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2714,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,GSE306506,GSE306506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,"pediatric medulloblastoma, SHH",MONDO:0002797,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.230161778382331,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202344,,,train,sda-all,samples/GSE306506/GSM9202344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.97}",,
GSM9202345,brain,disease,childhood medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3817,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,GSE306506,GSE306506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,"pediatric medulloblastoma, SHH",MONDO:0002797,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.953643722375171,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202345,,,train,sda-all,samples/GSE306506/GSM9202345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.49, ""life_stage"": 0.7000000000000001}",uberon,low_confidence_annotation
GSM9202346,brain,disease,childhood medulloblastoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),3613,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,GSE306506,GSE306506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,"pediatric medulloblastoma, SHH",MONDO:0002797,luna,,,luna,juvenile,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.93711650704432,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202346,,,train,sda-all,samples/GSE306506/GSM9202346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.62}",,
GSM9202347,brain,disease,childhood medulloblastoma,brain,tumour tissue,Homo sapiens,human,juvenile,unknown,Visium,Visium,True,H&E-like (heuristic),3984,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,GSE306506,GSE306506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,"pediatric medulloblastoma, Group 4",MONDO:0002797,luna,,,luna,juvenile,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.9508176930587173,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202347,,,train,sda-all,samples/GSE306506/GSM9202347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9202348,brain,disease,childhood medulloblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2385,Unveiling Transcriptional Heterogeneity and Discovering Footprints in Pediatric Medulloblastoma via Spatial RNA-Seq and Machine Learning,GSE306506,GSE306506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,"pediatric medulloblastoma, Group 4",MONDO:0002797,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.2310882110207455,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42449993,,GSM9202348,,,train,sda-all,samples/GSE306506/GSM9202348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9204000,liver,disease,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,5484,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,GSE306575,GSE306575,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18095,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204000,,,train,sda-all,samples/GSE306575/GSM9204000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9204001,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,5289,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,GSE306575,GSE306575,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204001,,,train,sda-all,samples/GSE306575/GSM9204001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9204002,liver,disease,hepatocellular carcinoma,liver,cell culture,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1575,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,GSE306575,GSE306575,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,MONDO:0007256,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18095,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204002,,,train,sda-all,samples/GSE306575/GSM9204002,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9204003,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,7788,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,GSE306575,GSE306575,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37120,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204003,,,train,sda-all,samples/GSE306575/GSM9204003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9204004,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,4313,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,GSE306575,GSE306575,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37120,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204004,,,train,sda-all,samples/GSE306575/GSM9204004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9204005,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,11788,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,GSE306575,GSE306575,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37120,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204005,,,train,sda-all,samples/GSE306575/GSM9204005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9204006,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,8640,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,GSE306575,GSE306575,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37120,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204006,,,train,sda-all,samples/GSE306575/GSM9204006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9204007,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,13348,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,GSE306575,GSE306575,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37120,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204007,,,train,sda-all,samples/GSE306575/GSM9204007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9204008,liver,disease,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,10732,Spatial and single-nucleus transcriptomic profiling of CHB liver biopsies,GSE306575,GSE306575,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37120,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41810427,,GSM9204008,,,train,sda-all,samples/GSE306575/GSM9204008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9204716,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4242,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,14.670394019471681,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204716,,,val,sda-all,samples/GSE306617/GSM9204716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204717,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4537,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,14.780835720822205,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204717,,,val,sda-all,samples/GSE306617/GSM9204717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204718,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3565,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,17.120759614244278,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204718,,,val,sda-all,samples/GSE306617/GSM9204718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204719,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3844,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,15.880780262708463,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204719,,,val,sda-all,samples/GSE306617/GSM9204719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204720,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4126,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,16.56777555422276,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204720,,,val,sda-all,samples/GSE306617/GSM9204720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204721,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3884,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,18.843301761700374,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204721,,,val,sda-all,samples/GSE306617/GSM9204721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204722,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4715,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,16.28339388545875,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204722,,,val,sda-all,samples/GSE306617/GSM9204722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9204723,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4992,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,15.531534060944814,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204723,,,val,sda-all,samples/GSE306617/GSM9204723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204724,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4710,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,13.84612528585095,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204724,,,val,sda-all,samples/GSE306617/GSM9204724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204725,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4925,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,16.655429638240157,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204725,,,val,sda-all,samples/GSE306617/GSM9204725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9204726,pancreas,disease,pancreatic adenosquamous carcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4750,"Clinical, genomic, and spatial transcriptomic features of pancreatic adenosquamous carcinoma",GSE306617,GSE306617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreas,MONDO:0005614,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,19.352046305293083,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9204726,,,val,sda-all,samples/GSE306617/GSM9204726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9194282,skin,disease,hypersensitivity reaction disease,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,249140,SPP1+ Macrophages Contribute to Hair Growth in Contact Hypersensitivity,GSE306678,GSE306678,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0000605,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,32285,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9194282,,,train,hesrt,samples/GSE306678/GSM9194282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.5, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9206470,lung,normal,,lung,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E,3871,Spatial transcriptomics and N-glycoproteomics reveal breed-dependent immune and structural responses in Mycoplasma hyopneumoniae-infected pig lungs,GSE306706,GSE306706,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,,luna,UBERON:0002048,Lung,,luna,,PBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,20648,counts,um,1.0,verified,4.092103638631796,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9206470,,,train,sda-all,samples/GSE306706/GSM9206470,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9206471,lung,disease,infectious disease,lung,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E,4030,Spatial transcriptomics and N-glycoproteomics reveal breed-dependent immune and structural responses in Mycoplasma hyopneumoniae-infected pig lungs,GSE306706,GSE306706,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,,luna,UBERON:0002048,Lung,MONDO:0005550,luna,,M. hyopneumoniae JS strain,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,20648,counts,um,1.0,verified,4.121958167702157,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9206471,,,train,sda-all,samples/GSE306706/GSM9206471,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9206472,lung,normal,,lung,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E,3959,Spatial transcriptomics and N-glycoproteomics reveal breed-dependent immune and structural responses in Mycoplasma hyopneumoniae-infected pig lungs,GSE306706,GSE306706,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,,luna,UBERON:0002048,Lung,,luna,,PBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,20648,counts,um,1.0,verified,4.092537768571874,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9206472,,,train,sda-all,samples/GSE306706/GSM9206472,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9206473,lung,disease,infectious disease,lung,primary tissue,Sus scrofa,pig,not stated,unknown,Visium,Visium,True,H&E,4686,Spatial transcriptomics and N-glycoproteomics reveal breed-dependent immune and structural responses in Mycoplasma hyopneumoniae-infected pig lungs,GSE306706,GSE306706,9823,Sus scrofa,9823,,False,False,GEO organism field,Sus scrofa,,luna,UBERON:0002048,Lung,MONDO:0005550,luna,,M. hyopneumoniae JS strain,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,20648,counts,um,1.0,verified,4.057772611676443,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9206473,,,train,sda-all,samples/GSE306706/GSM9206473,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210422,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,500025,10X VisiumHD Spatial transcriptomics of small intestine from mice fed stearic acid-rich high fat diet (HFD).,GSE306833,GSE306833,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,control dieet,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19059,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,41616823,,GSM9210422,,,train,hesrt,samples/GSE306833/GSM9210422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210423,small intestine,perturbation,,small intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,570718,10X VisiumHD Spatial transcriptomics of small intestine from mice fed stearic acid-rich high fat diet (HFD).,GSE306833,GSE306833,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,small intestine,,luna,,stearic acid-rich HFD,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19059,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41616823,,GSM9210423,,,train,hesrt,samples/GSE306833/GSM9210423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210725,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,43526,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500020640686922,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210725,,,train,sda-all,samples/GSE306852/GSM9210725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210726,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,32584,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999898593834505,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210726,,,train,sda-all,samples/GSE306852/GSM9210726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210727,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,89371,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500008607629803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210727,,,train,sda-all,samples/GSE306852/GSM9210727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210728,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,41251,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000164500740253,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210728,,,train,sda-all,samples/GSE306852/GSM9210728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210729,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,26648,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998323878287776,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210729,,,train,sda-all,samples/GSE306852/GSM9210729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9210730,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,50960,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999742692466035,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210730,,,train,sda-all,samples/GSE306852/GSM9210730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210731,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,54143,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000072314049586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210731,,,train,sda-all,samples/GSE306852/GSM9210731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210732,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,44621,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000090178295372,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210732,,,train,sda-all,samples/GSE306852/GSM9210732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9210733,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,50676,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999917430435141,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210733,,,train,sda-all,samples/GSE306852/GSM9210733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9210734,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,41112,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000058788947678,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210734,,,train,sda-all,samples/GSE306852/GSM9210734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210735,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,15441,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499985632183908,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210735,,,train,sda-all,samples/GSE306852/GSM9210735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9210736,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,34980,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499967461296068,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210736,,,train,sda-all,samples/GSE306852/GSM9210736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9210737,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,44598,Spatial Analysis of T Cell Clonality in Autoimmune Kidney Disease Using TRV Probes,GSE306852,GSE306852,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997500000000006,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42228574,,GSM9210737,,,train,sda-all,samples/GSE306852/GSM9210737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9211260,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,477376,Peptidoglycan from Bifidobacterium adolescentis enhances IL-10 production in regulatory B cells to alleviate gut inflammation,GSE306881,GSE306881,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,small intestine,MONDO:0005011,luna,Crohn's disease,,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998968467685895,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,CG-17739d1ad2a9,cross_gse_redeposit,GSM8803514,val,sda-all,samples/GSE306881/GSM9211260,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9211261,small intestine,disease,Crohn disease,small intestine,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,381551,Peptidoglycan from Bifidobacterium adolescentis enhances IL-10 production in regulatory B cells to alleviate gut inflammation,GSE306881,GSE306881,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002108,small intestine,MONDO:0005011,luna,Crohn's disease,,luna,not stated,,not stated,,,,fresh frozen,OCT embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999338624338624,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9211261,,,val,sda-all,samples/GSE306881/GSM9211261,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9214538,eye,normal,,retina,primary tissue,Mus musculus,house mouse,juvenile,unknown,Xenium,Xenium,True,fluorescence: DAPI,95887,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],GSE307031,GSE307031,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000966,Retina,,luna,,,luna,juvenile,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,13780,counts,um,1.0,verified,0.5000103476821192,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214538,,,train,sda-all,samples/GSE307031/GSM9214538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9214539,eye,normal,,retina,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,70558,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],GSE307031,GSE307031,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000966,Retina,,luna,,,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,13780,counts,um,1.0,verified,0.4999890452310239,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214539,,,train,sda-all,samples/GSE307031/GSM9214539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM9214540,eye,normal,,retina,primary tissue,Mus musculus,house mouse,aged,unknown,Xenium,Xenium,True,fluorescence: DAPI,54628,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],GSE307031,GSE307031,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000966,Retina,,luna,,,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,13780,counts,um,1.0,verified,0.5000103455410718,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214540,,,train,sda-all,samples/GSE307031/GSM9214540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9214541,eye,normal,,retina,primary tissue,Mus musculus,house mouse,aged,unknown,Xenium,Xenium,True,fluorescence: DAPI,64265,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],GSE307031,GSE307031,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000966,Retina,,luna,,,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,13780,counts,um,1.0,verified,0.500008173852391,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214541,,,train,sda-all,samples/GSE307031/GSM9214541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9214542,eye,normal,,retina,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,65560,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],GSE307031,GSE307031,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000966,Retina,,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,13780,counts,um,1.0,verified,0.49999885499679403,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214542,,,train,sda-all,samples/GSE307031/GSM9214542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9214543,eye,perturbation,,retina,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,92464,Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging [Mouse_Xenium],GSE307031,GSE307031,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000966,Retina,,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,Xenium Mouse 5K Pan Tissue & Pathways Panel,xenium-3.1.0.4,cell,13780,counts,um,1.0,verified,0.5000043145105619,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9214543,,,train,sda-all,samples/GSE307031/GSM9214543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9216987,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,192895,Mapping the Dialogue: Decoding Alveolar Stem-Niche Interactions [II],GSE307128,GSE307128+GSE307351,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Bleomycin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,4.691560238912609,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42418498,,GSM9216987,,,train,sda-all,samples/GSE307128/GSM9216987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9216988,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,178431,Mapping the Dialogue: Decoding Alveolar Stem-Niche Interactions [II],GSE307128,GSE307128+GSE307351,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Bleomycin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,4.69163305777653,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42418498,,GSM9216988,,,train,sda-all,samples/GSE307128/GSM9216988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9216989,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,199155,Mapping the Dialogue: Decoding Alveolar Stem-Niche Interactions [II],GSE307128,GSE307128+GSE307351,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Bleomycin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,4.696546255151453,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42418498,,GSM9216989,,,train,sda-all,samples/GSE307128/GSM9216989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9216990,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,260851,Mapping the Dialogue: Decoding Alveolar Stem-Niche Interactions [II],GSE307128,GSE307128+GSE307351,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,Bleomycin,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,4.696222104980737,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42418498,,GSM9216990,,,train,sda-all,samples/GSE307128/GSM9216990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9219222,small intestine,disease,graft versus host disease,digestive system,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,592669,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,GSE307215,GSE307215,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001007,gut,MONDO:0013730,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,um,1.0,verified,,UNRESOLVED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,FAIL,,,42754741,,GSM9219222,,,val,sda-all,samples/GSE307215/GSM9219222,sda-tissue-disease-2.3,"{""organ"": 0.47000000000000003, ""sample_kind"": 0.97, ""disease_status"": 0.24, ""uberon"": 0.34, ""life_stage"": 1.0}",organ;disease_status;uberon,low_confidence_annotation
GSM9219223,other,disease,graft versus host disease,digestive system,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,145780,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,GSE307215,GSE307215,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001007,gut,MONDO:0013730,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,um,1.0,verified,,UNRESOLVED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,FAIL,,,42754741,,GSM9219223,,,val,sda-all,samples/GSE307215/GSM9219223,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 0.97, ""disease_status"": 0.45, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9219224,other,disease,graft versus host disease,digestive system,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),550017,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,GSE307215,GSE307215,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001007,gut,MONDO:0013730,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,um,1.0,verified,1.2641570919027365,FAILED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,42754741,,GSM9219224,,,val,sda-all,samples/GSE307215/GSM9219224,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.98, ""disease_status"": 0.2, ""uberon"": 0.98, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9219225,other,disease,graft versus host disease,digestive system,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),258967,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,GSE307215,GSE307215,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001007,gut,MONDO:0013730,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,um,1.0,verified,1.088512056420174,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,42754741,,GSM9219225,,,val,sda-all,samples/GSE307215/GSM9219225,sda-tissue-disease-2.3,"{""organ"": 0.31, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9219226,small intestine,disease,graft versus host disease,digestive system,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),222220,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,GSE307215,GSE307215,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001007,gut,MONDO:0013730,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,um,1.0,verified,2.7625894693846567,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,42754741,,GSM9219226,,,val,sda-all,samples/GSE307215/GSM9219226,sda-tissue-disease-2.3,"{""organ"": 0.33, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 0.67, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9219227,other,disease,graft versus host disease,digestive system,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,221682,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,GSE307215,GSE307215,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001007,gut,MONDO:0013730,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,um,1.0,verified,,UNRESOLVED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,FAIL,,,42754741,,GSM9219227,,,val,sda-all,samples/GSE307215/GSM9219227,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.96, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9219228,other,disease,graft versus host disease,digestive system,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),168857,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,GSE307215,GSE307215,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001007,gut,MONDO:0013730,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,um,1.0,verified,1.041369508157627,VERIFIED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,42754741,,GSM9219228,,,val,sda-all,samples/GSE307215/GSM9219228,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.98, ""disease_status"": 0.6900000000000001, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9219229,small intestine,disease,graft versus host disease,digestive system,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),272298,Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease,GSE307215,GSE307215,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001007,gut,MONDO:0013730,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,um,1.0,verified,1.59109527903929,VERIFIED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,PASS,,,42754741,,GSM9219229,,,val,sda-all,samples/GSE307215/GSM9219229,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 0.98, ""disease_status"": 0.53, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9223468,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,45898,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999187063970674,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223468,,,train,sda-all,samples/GSE307404/GSM9223468,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223469,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,61222,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999976980801989,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223469,,,train,sda-all,samples/GSE307404/GSM9223469,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223470,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,41266,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999868440835964,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223470,,,train,sda-all,samples/GSE307404/GSM9223470,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223471,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,57508,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000132908027645,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223471,,,train,sda-all,samples/GSE307404/GSM9223471,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223472,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,66560,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000020683949256,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223472,,,train,sda-all,samples/GSE307404/GSM9223472,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223473,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,56715,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000013787018143,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223473,,,train,sda-all,samples/GSE307404/GSM9223473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223474,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,46917,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000048294513743,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223474,,,train,sda-all,samples/GSE307404/GSM9223474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223475,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,71389,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999727443199155,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223475,,,train,sda-all,samples/GSE307404/GSM9223475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223476,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,59787,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999654807382515,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223476,,,train,sda-all,samples/GSE307404/GSM9223476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223477,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,48542,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000013787018143,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223477,,,train,sda-all,samples/GSE307404/GSM9223477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.12, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223478,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,62396,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000089610676078,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223478,,,train,sda-all,samples/GSE307404/GSM9223478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223479,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,45675,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999870720860482,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223479,,,train,sda-all,samples/GSE307404/GSM9223479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223480,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,63221,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000067007797271,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223480,,,train,sda-all,samples/GSE307404/GSM9223480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223481,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,61932,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223481,,,train,sda-all,samples/GSE307404/GSM9223481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223482,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,56956,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000097456388266,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223482,,,train,sda-all,samples/GSE307404/GSM9223482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223483,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,59962,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999934646218195,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223483,,,train,sda-all,samples/GSE307404/GSM9223483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223484,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,44655,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000047697786822,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223484,,,train,sda-all,samples/GSE307404/GSM9223484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223485,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,68976,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999945244816509,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223485,,,train,sda-all,samples/GSE307404/GSM9223485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223486,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,46286,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999756465832157,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223486,,,train,sda-all,samples/GSE307404/GSM9223486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223487,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,45793,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000116423470972,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223487,,,train,sda-all,samples/GSE307404/GSM9223487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223488,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,59438,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500013109958048,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223488,,,train,sda-all,samples/GSE307404/GSM9223488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223489,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,67472,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999756667315554,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223489,,,train,sda-all,samples/GSE307404/GSM9223489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9223490,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,47384,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000055151114052,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223490,,,train,sda-all,samples/GSE307404/GSM9223490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9223491,brain,disease,schizophrenia,dorsolateral prefrontal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,53201,Schizophrenia-linked gene expression changes across cortical layers and cellular microenvironments in human prefrontal cortex [Xenium],GSE307404,GSE307404,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0009834,dorsolateral prefrontal cortex,MONDO:0005090,mondo_predicate,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000064656287176,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9223491,,,train,sda-all,samples/GSE307404/GSM9223491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9225625,testis,normal,,testis,primary tissue,Bos taurus,domestic cattle,not stated,unknown,Stereo-seq,Stereo-seq,False,,538856,Dissecting the development of bovine testicular tissue using spatial transcriptomics,GSE307496,GSE307496,9913,Bos taurus,9913,,False,False,GEO organism field,Bos taurus,,luna,UBERON:0000473,testis,,luna,,calves,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,cell,20845,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41639718,,GSM9225625,,,train,sda-all,samples/GSE307496/GSM9225625,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9225626,testis,normal,,testis,primary tissue,Bos taurus,domestic cattle,not stated,unknown,Stereo-seq,Stereo-seq,False,,394125,Dissecting the development of bovine testicular tissue using spatial transcriptomics,GSE307496,GSE307496,9913,Bos taurus,9913,,False,False,GEO organism field,Bos taurus,,luna,UBERON:0000473,testis,,luna,,adult bovine,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,cell,20491,counts,um,1.0,verified,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41639718,,GSM9225626,,,train,sda-all,samples/GSE307496/GSM9225626,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM9225693,skin,disease,,skin of body,primary tissue,Homo sapiens,human,juvenile,female,Visium,Visium,True,H&E-like (heuristic),1981,Single-cell and spatial transcriptomic atlas of pathological scars uncovers neuro-fibroblast crosstalk mechanisms across scar types,GSE307504,GSE307504,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,hypertrophic scar tissue,,luna,,,luna,juvenile,,sample text,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.370789328404686,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9225693,,,train,sda-all,samples/GSE307504/GSM9225693,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9225694,skin,disease,keloid,skin of body,primary tissue,Homo sapiens,human,juvenile,male,Visium,Visium,True,H&E-like (heuristic),4062,Single-cell and spatial transcriptomic atlas of pathological scars uncovers neuro-fibroblast crosstalk mechanisms across scar types,GSE307504,GSE307504,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,keloid tissue,MONDO:0005348,luna,,,luna,juvenile,,sample text,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.2666617692136475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9225694,,,train,sda-all,samples/GSE307504/GSM9225694,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226168,lung,disease,glandular cell neoplasm,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,10108,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0024276,luna,atypical adenomatous hyperplasia,AAH,age rule: bare number read as years,aged,65,extracted field,female,GSE307534:P1,P1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.701564845196209,platform_constant,5.701564845196209,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226168,,,train,hesrt,samples/GSE307534/GSM9226168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.52, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9226169,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,6603,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,65,extracted field,female,GSE307534:P1,P1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.217514893973237,platform_constant,5.217514893973237,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,41202811,,GSM9226169,,,train,hesrt,samples/GSE307534/GSM9226169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226170,lung,disease,glandular cell neoplasm,lung,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,11782,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0024276,luna,atypical adenomatous hyperplasia,AAH,age rule: bare number read as years,aged,73,extracted field,male,GSE307534:P2,P2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.429312925613559,platform_constant,6.429312925613559,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226170,,,train,hesrt,samples/GSE307534/GSM9226170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9226171,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,10995,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,73,extracted field,male,GSE307534:P2,P2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.166760402593427,platform_constant,6.166760402593427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226171,,,train,hesrt,samples/GSE307534/GSM9226171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226172,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,9954,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,adenocarcinoma in situ,AIS,age rule: bare number read as years,aged,74,extracted field,male,GSE307534:P3,P3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.768583445809624,platform_constant,5.768583445809624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226172,,,train,hesrt,samples/GSE307534/GSM9226172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226173,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,14336,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,74,extracted field,male,GSE307534:P3,P3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.665375453911785,platform_constant,6.665375453911785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226173,,,train,hesrt,samples/GSE307534/GSM9226173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226174,lung,normal,,lung,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,12453,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,Normal,age rule: bare number read as years,aged,74,extracted field,female,GSE307534:P4,P4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.047162453144086,platform_constant,6.047162453144086,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226174,,,train,hesrt,samples/GSE307534/GSM9226174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226175,lung,disease,glandular cell neoplasm,lung,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,12441,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0024276,luna,atypical adenomatous hyperplasia,AAH,age rule: bare number read as years,aged,74,extracted field,female,GSE307534:P4,P4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.739254126338237,platform_constant,6.739254126338237,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226175,,,train,hesrt,samples/GSE307534/GSM9226175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226176,lung,disease,glandular cell neoplasm,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,12295,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0024276,luna,,,age rule: bare number read as years,aged,74,extracted field,Female,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,6.173587455641155,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41202811,,GSM9226176,,,train,sda-all,samples/GSE307534/GSM9226176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9226177,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,12978,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,74,extracted field,female,GSE307534:P4,P4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.973259535740269,platform_constant,6.973259535740269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226177,,,train,hesrt,samples/GSE307534/GSM9226177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226178,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,10499,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,adenocarcinoma in situ,AIS,age rule: bare number read as years,aged,81,extracted field,male,GSE307534:P5,P5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.1960425716388805,platform_constant,6.1960425716388805,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226178,,,train,hesrt,samples/GSE307534/GSM9226178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226179,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,12084,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,81,extracted field,male,GSE307534:P5,P5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.46479488853165,platform_constant,6.46479488853165,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226179,,,train,hesrt,samples/GSE307534/GSM9226179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226180,lung,disease,glandular cell neoplasm,lung,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,11229,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0024276,luna,atypical adenomatous hyperplasia,AAH,age rule: bare number read as years,aged,66,extracted field,male,GSE307534:P6,P6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.195102535604207,platform_constant,6.195102535604207,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226180,,,train,hesrt,samples/GSE307534/GSM9226180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9226181,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,11724,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,66,extracted field,male,GSE307534:P6,P6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.493411096255623,platform_constant,7.493411096255623,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226181,,,train,hesrt,samples/GSE307534/GSM9226181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9226182,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,13616,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,adult,46,extracted field,female,GSE307534:P7,P7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.375278173988304,platform_constant,6.375278173988304,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226182,,,train,hesrt,samples/GSE307534/GSM9226182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226183,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,13074,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,adult,46,extracted field,female,GSE307534:P7,P7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.224090504310239,platform_constant,6.224090504310239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226183,,,train,hesrt,samples/GSE307534/GSM9226183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226184,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,5108,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,adenocarcinoma in situ,AIS,age rule: bare number read as years,adult,63,extracted field,female,GSE307534:P8,P8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.295169536999984,platform_constant,6.295169536999984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226184,,,train,hesrt,samples/GSE307534/GSM9226184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226185,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,12642,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,adult,63,extracted field,female,GSE307534:P8,P8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,7.354007608519195,platform_constant,7.354007608519195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226185,,,train,hesrt,samples/GSE307534/GSM9226185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226186,lung,disease,glandular cell neoplasm,lung,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,10979,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0024276,luna,atypical adenomatous hyperplasia,AAH,age rule: bare number read as years,adult,63,extracted field,female,GSE307534:P9,P9,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.0063620427778135,platform_constant,6.0063620427778135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226186,,,train,hesrt,samples/GSE307534/GSM9226186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9226187,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,11029,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,adenocarcinoma in situ,AIS,age rule: bare number read as years,adult,63,extracted field,female,GSE307534:P9,P9,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.34203534995169,platform_constant,6.34203534995169,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226187,,,train,hesrt,samples/GSE307534/GSM9226187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226188,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,12127,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,adult,63,extracted field,female,GSE307534:P9,P9,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.665546262216075,platform_constant,6.665546262216075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226188,,,train,hesrt,samples/GSE307534/GSM9226188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226189,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,12180,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,minimally invasive adenocarcinoma,MIA,age rule: bare number read as years,adult,58,extracted field,female,GSE307534:P10,P10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.027185086382337,platform_constant,6.027185086382337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226189,,,train,hesrt,samples/GSE307534/GSM9226189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226190,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,13441,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,adult,58,extracted field,female,GSE307534:P10,P10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.250064752544415,platform_constant,6.250064752544415,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226190,,,train,hesrt,samples/GSE307534/GSM9226190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226191,lung,disease,glandular cell neoplasm,lung,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,10928,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0024276,luna,atypical adenomatous hyperplasia,AAH,age rule: bare number read as years,aged,70,extracted field,female,GSE307534:P11,P11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.331667289007507,platform_constant,6.331667289007507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226191,,,train,hesrt,samples/GSE307534/GSM9226191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226192,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,11794,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,70,extracted field,female,GSE307534:P11,P11,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.065134057157621,platform_constant,6.065134057157621,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226192,,,train,hesrt,samples/GSE307534/GSM9226192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226193,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,12427,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005061,luna,,,age rule: bare number read as years,aged,74,extracted field,Female,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,6.073792595659726,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41202811,,GSM9226193,,,train,sda-all,samples/GSE307534/GSM9226193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226194,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,14177,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,74,extracted field,female,GSE307534:P12,P12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.164123857920178,platform_constant,6.164123857920178,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226194,,,train,hesrt,samples/GSE307534/GSM9226194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226195,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,13713,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,minimally invasive adenocarcinoma,MIA,age rule: bare number read as years,aged,77,extracted field,male,GSE307534:P13,P13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,5.908915252999291,platform_constant,5.908915252999291,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226195,,,train,hesrt,samples/GSE307534/GSM9226195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226196,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4880,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,77,extracted field,male,GSE307534:P13,P13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,4.437298150666556,platform_constant,4.437298150666556,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226196,,,train,hesrt,samples/GSE307534/GSM9226196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226197,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,12335,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005061,luna,,,age rule: bare number read as years,adult,53,extracted field,Male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,7.080463841856423,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41202811,,GSM9226197,,,train,sda-all,samples/GSE307534/GSM9226197,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226198,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,11488,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,adult,53,extracted field,male,GSE307534:P14,P14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.277023753145384,platform_constant,6.277023753145384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226198,,,train,hesrt,samples/GSE307534/GSM9226198,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226199,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,13250,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,minimally invasive adenocarcinoma,MIA,age rule: bare number read as years,adult,63,extracted field,male,GSE307534:P15,P15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.3371658444195,platform_constant,6.3371658444195,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226199,,,train,hesrt,samples/GSE307534/GSM9226199,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226200,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,14231,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,adult,63,extracted field,male,GSE307534:P15,P15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,7.475420476987616,platform_constant,7.475420476987616,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226200,,,train,hesrt,samples/GSE307534/GSM9226200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226201,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,13454,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005061,luna,,,age rule: bare number read as years,aged,68,extracted field,Female,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,6.486557174094152,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41202811,,GSM9226201,,,train,sda-all,samples/GSE307534/GSM9226201,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226202,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,7736,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,68,extracted field,female,GSE307534:P16,P16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.601779429085135,platform_constant,6.601779429085135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226202,,,train,hesrt,samples/GSE307534/GSM9226202,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9226203,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,14336,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005061,luna,,,age rule: bare number read as years,aged,72,extracted field,Male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,6.527022078176779,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41202811,,GSM9226203,,,train,sda-all,samples/GSE307534/GSM9226203,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226204,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,13515,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,72,extracted field,male,GSE307534:P17,P17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,7.4994061857396845,platform_constant,7.4994061857396845,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226204,,,train,hesrt,samples/GSE307534/GSM9226204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226205,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,13006,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,minimally invasive adenocarcinoma,MIA,age rule: bare number read as years,aged,77,extracted field,female,GSE307534:P18,P18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.564095601730838,platform_constant,6.564095601730838,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226205,,,train,hesrt,samples/GSE307534/GSM9226205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226206,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,11971,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,77,extracted field,female,GSE307534:P18,P18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.389858722339835,platform_constant,6.389858722339835,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226206,,,train,hesrt,samples/GSE307534/GSM9226206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226207,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,13899,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,adenocarcinoma in situ,AIS,age rule: bare number read as years,aged,76,extracted field,male,GSE307534:P19,P19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.568188705411009,platform_constant,6.568188705411009,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226207,,,train,hesrt,samples/GSE307534/GSM9226207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226208,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,12572,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,76,extracted field,male,GSE307534:P19,P19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.308217611125222,platform_constant,6.308217611125222,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226208,,,train,hesrt,samples/GSE307534/GSM9226208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226209,lung,disease,glandular cell neoplasm,lung,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,12304,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0024276,luna,atypical adenomatous hyperplasia,AAH,age rule: bare number read as years,aged,74,extracted field,male,GSE307534:P20,P20,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.509076102423803,platform_constant,6.509076102423803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226209,,,train,hesrt,samples/GSE307534/GSM9226209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226210,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,13604,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,74,extracted field,male,GSE307534:P20,P20,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.620290706786491,platform_constant,6.620290706786491,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226210,,,train,hesrt,samples/GSE307534/GSM9226210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226211,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,13372,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,adenocarcinoma in situ,AIS,age rule: bare number read as years,aged,72,extracted field,female,GSE307534:P21,P21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.523257904939718,platform_constant,6.523257904939718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226211,,,train,hesrt,samples/GSE307534/GSM9226211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226212,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,12926,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,adenocarcinoma in situ,AIS,age rule: bare number read as years,aged,72,extracted field,female,GSE307534:P21,P21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.181133783059006,platform_constant,6.181133783059006,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226212,,,train,hesrt,samples/GSE307534/GSM9226212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226213,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,13348,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,72,extracted field,female,GSE307534:P21,P21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,7.015892128199318,platform_constant,7.015892128199318,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226213,,,train,hesrt,samples/GSE307534/GSM9226213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226214,lung,disease,glandular cell neoplasm,lung,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,7943,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0024276,luna,atypical adenomatous hyperplasia,AAH,age rule: bare number read as years,aged,68,extracted field,female,GSE307534:P22,P22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,5.8955538816704856,platform_constant,5.8955538816704856,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226214,,,train,hesrt,samples/GSE307534/GSM9226214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.64, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9226215,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,12886,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,adenocarcinoma in situ,AIS,age rule: bare number read as years,aged,68,extracted field,female,GSE307534:P22,P22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.444209182175353,platform_constant,6.444209182175353,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226215,,,train,hesrt,samples/GSE307534/GSM9226215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9226216,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,12229,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,68,extracted field,female,GSE307534:P22,P22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.410607268086167,platform_constant,6.410607268086167,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226216,,,train,hesrt,samples/GSE307534/GSM9226216,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9226217,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,9996,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,adenocarcinoma in situ,AIS,age rule: bare number read as years,aged,74,extracted field,male,GSE307534:P23,P23,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.318702684861457,platform_constant,6.318702684861457,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226217,,,train,hesrt,samples/GSE307534/GSM9226217,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226218,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,10826,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,adenocarcinoma in situ,AIS,age rule: bare number read as years,aged,74,extracted field,male,GSE307534:P23,P23,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,5.883695529773573,platform_constant,5.883695529773573,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226218,,,train,hesrt,samples/GSE307534/GSM9226218,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226219,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,10894,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,74,extracted field,male,GSE307534:P23,P23,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,5.984603806076194,platform_constant,5.984603806076194,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226219,,,train,hesrt,samples/GSE307534/GSM9226219,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9226220,lung,disease,glandular cell neoplasm,lung,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,6738,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0024276,luna,atypical adenomatous hyperplasia,AAH,age rule: bare number read as years,adult,61,extracted field,male,GSE307534:P24,P24,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.002294770267733,platform_constant,6.002294770267733,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226220,,,train,hesrt,samples/GSE307534/GSM9226220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226221,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,6276,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,adult,61,extracted field,male,GSE307534:P24,P24,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,5.894616971712669,platform_constant,5.894616971712669,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226221,,,train,hesrt,samples/GSE307534/GSM9226221,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9226222,lung,disease,glandular cell neoplasm,lung,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,9294,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0024276,luna,atypical adenomatous hyperplasia,AAH,age rule: bare number read as years,aged,70,extracted field,male,GSE307534:P25,P25,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,6.279320941461553,platform_constant,6.279320941461553,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226222,,,train,hesrt,samples/GSE307534/GSM9226222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9226223,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3791,"Spatial transcriptomics analysis of normal lung tissues, precursor lung lesions and invasive lung adenocarcinomas",GSE307534,GSE307534,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,LUAD,age rule: bare number read as years,aged,70,extracted field,male,GSE307534:P25,P25,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18120,counts,pixel,5.002418152138142,platform_constant,5.002418152138142,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41202811,,GSM9226223,,,train,hesrt,samples/GSE307534/GSM9226223,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227428,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4937,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br2720,Hs_Br2720,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.7786496904921245,platform_constant,7.7786496904921245,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227428,,,train,hesrt,samples/GSE307586/GSM9227428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227429,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4861,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br2720,Hs_Br2720,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.778700379438586,platform_constant,7.778700379438586,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227429,,,train,hesrt,samples/GSE307586/GSM9227429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227430,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4989,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br2720,Hs_Br2720,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.7786496904921245,platform_constant,7.7786496904921245,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227430,,,train,hesrt,samples/GSE307586/GSM9227430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227431,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br2720,Hs_Br2720,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,7.750719442821885,platform_constant,7.750719442821885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227431,,,train,hesrt,samples/GSE307586/GSM9227431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227432,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4221,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8492,Hs_Br8492,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.014981708714281,platform_constant,5.014981708714281,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227432,,,train,hesrt,samples/GSE307586/GSM9227432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227433,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4265,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8492,Hs_Br8492,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.014981708714309,platform_constant,5.014981708714309,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227433,,,train,hesrt,samples/GSE307586/GSM9227433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9227434,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4188,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8492,Hs_Br8492,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.014981708714252,platform_constant,5.014981708714252,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227434,,,train,hesrt,samples/GSE307586/GSM9227434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227435,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4504,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8492,Hs_Br8492,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.0149490292013885,platform_constant,5.0149490292013885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227435,,,train,hesrt,samples/GSE307586/GSM9227435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227436,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6522,Hs_Br6522,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.9895310109386335,platform_constant,4.9895310109386335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227436,,,train,hesrt,samples/GSE307586/GSM9227436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227437,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4569,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6522,Hs_Br6522,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.9895310109386335,platform_constant,4.9895310109386335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227437,,,train,hesrt,samples/GSE307586/GSM9227437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227438,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4980,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6522,Hs_Br6522,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.9895310109386335,platform_constant,4.9895310109386335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227438,,,train,hesrt,samples/GSE307586/GSM9227438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227439,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4820,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6522,Hs_Br6522,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.992296997930818,platform_constant,4.992296997930818,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227439,,,train,hesrt,samples/GSE307586/GSM9227439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227440,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4972,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6423,Hs_Br6423,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.437476715100347,platform_constant,4.437476715100347,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227440,,,train,hesrt,samples/GSE307586/GSM9227440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227441,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4959,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6423,Hs_Br6423,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.435198694809446,platform_constant,4.435198694809446,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227441,,,train,hesrt,samples/GSE307586/GSM9227441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227442,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4640,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8325,Hs_Br8325,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.4351697933814265,platform_constant,4.4351697933814265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227442,,,train,hesrt,samples/GSE307586/GSM9227442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227443,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6423,Hs_Br6423,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.451268255297877,platform_constant,4.451268255297877,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227443,,,train,hesrt,samples/GSE307586/GSM9227443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227444,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4393,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8325,Hs_Br8325,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.562318950075365,platform_constant,4.562318950075365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227444,,,train,hesrt,samples/GSE307586/GSM9227444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227445,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4407,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8325,Hs_Br8325,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.545848484551607,platform_constant,4.545848484551607,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227445,,,train,hesrt,samples/GSE307586/GSM9227445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227446,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4400,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8325,Hs_Br8325,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.545848484551631,platform_constant,4.545848484551631,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227446,,,train,hesrt,samples/GSE307586/GSM9227446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227447,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4784,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8325,Hs_Br8325,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.545848484551654,platform_constant,4.545848484551654,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227447,,,train,hesrt,samples/GSE307586/GSM9227447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227448,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4991,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6432,Hs_Br6432,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.705776014582898,platform_constant,4.705776014582898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227448,,,train,hesrt,samples/GSE307586/GSM9227448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9227449,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4764,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6432,Hs_Br6432,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.70577601458291,platform_constant,4.70577601458291,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227449,,,train,hesrt,samples/GSE307586/GSM9227449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227450,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4988,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6432,Hs_Br6432,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.705776014582898,platform_constant,4.705776014582898,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227450,,,train,hesrt,samples/GSE307586/GSM9227450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227451,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4739,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6432,Hs_Br6432,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.70577601458291,platform_constant,4.70577601458291,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227451,,,train,hesrt,samples/GSE307586/GSM9227451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227452,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4733,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6471-Left,Hs_Br6471-Left,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.441661197379996,platform_constant,5.441661197379996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227452,,,train,hesrt,samples/GSE307586/GSM9227452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227453,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4991,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6471-Left,Hs_Br6471-Left,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.461377102785318,platform_constant,5.461377102785318,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227453,,,train,hesrt,samples/GSE307586/GSM9227453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227454,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4452,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6471-Left,Hs_Br6471-Left,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.441661197379996,platform_constant,5.441661197379996,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227454,,,train,hesrt,samples/GSE307586/GSM9227454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227455,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4992,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br6471-Left,Hs_Br6471-Left,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.4416611973799975,platform_constant,5.4416611973799975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227455,,,train,hesrt,samples/GSE307586/GSM9227455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227456,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4402,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br2743-Left,Hs_Br2743-Left,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.952707593163473,platform_constant,4.952707593163473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227456,,,train,hesrt,samples/GSE307586/GSM9227456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227457,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4226,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br2743-Left,Hs_Br2743-Left,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.952707593163473,platform_constant,4.952707593163473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227457,,,train,hesrt,samples/GSE307586/GSM9227457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227458,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4188,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br2743-Left,Hs_Br2743-Left,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.9706521858923125,platform_constant,4.9706521858923125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227458,,,train,hesrt,samples/GSE307586/GSM9227458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9227459,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4988,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br2743-Left,Hs_Br2743-Left,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.952707593163473,platform_constant,4.952707593163473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227459,,,train,hesrt,samples/GSE307586/GSM9227459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227460,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4903,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br3942,Hs_Br3942,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.405054462523279,platform_constant,5.405054462523279,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227460,,,train,hesrt,samples/GSE307586/GSM9227460,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227461,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4510,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br3942,Hs_Br3942,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.405054462523295,platform_constant,5.405054462523295,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227461,,,train,hesrt,samples/GSE307586/GSM9227461,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227462,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4464,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br3942,Hs_Br3942,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.424602387583212,platform_constant,5.424602387583212,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227462,,,train,hesrt,samples/GSE307586/GSM9227462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227463,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4484,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br3942,Hs_Br3942,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.405054462523279,platform_constant,5.405054462523279,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227463,,,train,hesrt,samples/GSE307586/GSM9227463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9227464,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4322,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8667,Hs_Br8667,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.66639555470385,platform_constant,4.66639555470385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227464,,,train,hesrt,samples/GSE307586/GSM9227464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9227465,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4844,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens [Spatial Transcriptomics],GSE307586,GSE307586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,neurotypical control,luna,not stated,,not stated,,GSE307586:Hs_Br8667,Hs_Br8667,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.666395554703838,platform_constant,4.666395554703838,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,40964296;42385698,,GSM9227465,,,train,hesrt,samples/GSE307586/GSM9227465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9227486,kidney,perturbation,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,50133,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227486,,,train,sda-all,samples/GSE307588/GSM9227486,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227487,kidney,perturbation,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,27703,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227487,,,train,sda-all,samples/GSE307588/GSM9227487,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227488,kidney,perturbation,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,47045,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227488,,,train,sda-all,samples/GSE307588/GSM9227488,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227489,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,25481,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227489,,,train,sda-all,samples/GSE307588/GSM9227489,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9227490,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,50978,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227490,,,train,sda-all,samples/GSE307588/GSM9227490,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.81, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227491,kidney,disease,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,6904,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227491,,,train,sda-all,samples/GSE307588/GSM9227491,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227492,kidney,disease,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,11571,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227492,,,train,sda-all,samples/GSE307588/GSM9227492,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.5, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9227493,kidney,perturbation,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,15368,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227493,,,train,sda-all,samples/GSE307588/GSM9227493,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227494,kidney,perturbation,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,59682,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227494,,,train,sda-all,samples/GSE307588/GSM9227494,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.52, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9227495,kidney,perturbation,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,70475,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227495,,,train,sda-all,samples/GSE307588/GSM9227495,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.74, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227496,kidney,perturbation,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,22681,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227496,,,train,sda-all,samples/GSE307588/GSM9227496,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9227497,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,61128,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227497,,,train,sda-all,samples/GSE307588/GSM9227497,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9227498,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,51365,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227498,,,train,sda-all,samples/GSE307588/GSM9227498,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9227499,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,9489,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227499,,,train,sda-all,samples/GSE307588/GSM9227499,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.68, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227500,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,29010,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227500,,,train,sda-all,samples/GSE307588/GSM9227500,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9227501,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,22955,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227501,,,train,sda-all,samples/GSE307588/GSM9227501,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9227502,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,52145,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227502,,,train,sda-all,samples/GSE307588/GSM9227502,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM9227503,kidney,disease,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,38106,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227503,,,train,sda-all,samples/GSE307588/GSM9227503,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.68, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227504,kidney,disease,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,4093,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227504,,,train,sda-all,samples/GSE307588/GSM9227504,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.81, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227505,kidney,perturbation,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,23034,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227505,,,train,sda-all,samples/GSE307588/GSM9227505,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227506,kidney,perturbation,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,11994,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Hypoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227506,,,train,sda-all,samples/GSE307588/GSM9227506,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.72, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227507,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,27758,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227507,,,train,sda-all,samples/GSE307588/GSM9227507,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227508,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,51637,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227508,,,train,sda-all,samples/GSE307588/GSM9227508,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.8, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227509,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,52196,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227509,,,train,sda-all,samples/GSE307588/GSM9227509,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9227510,kidney,normal,,kidney,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,12626,Spatial profiling of hypoxic injury in human kidney organoids,GSE307588,GSE307588,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002113,kidney organoid,,luna,,Normoxia,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,380,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42613631,,GSM9227510,,,train,sda-all,samples/GSE307588/GSM9227510,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9228905,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,185674,Belantamab Mafodotin Triggers Immune Invigoration in Multiple Myeloma Via Inflammatory and Immunogenic Cell Death [Xenium],GSE307661,GSE307661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow trephine,MONDO:0009693,luna,,,luna,not stated,,not stated,,GSE307661:MM00075,MM00075,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998580864898334,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9228905,,,test,sda-all,samples/GSE307661/GSM9228905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9228906,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,35664,Belantamab Mafodotin Triggers Immune Invigoration in Multiple Myeloma Via Inflammatory and Immunogenic Cell Death [Xenium],GSE307661,GSE307661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow trephine,MONDO:0009693,luna,,,luna,not stated,,not stated,,GSE307661:MM00075,MM00075,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000020664572656,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9228906,,,test,sda-all,samples/GSE307661/GSM9228906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9228907,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,73464,Belantamab Mafodotin Triggers Immune Invigoration in Multiple Myeloma Via Inflammatory and Immunogenic Cell Death [Xenium],GSE307661,GSE307661,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow trephine,MONDO:0009693,luna,,,luna,not stated,,not stated,,GSE307661:MM00263,MM00263,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000089779005524,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9228907,,,test,sda-all,samples/GSE307661/GSM9228907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9229872,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,150779,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],GSE307719,GSE307719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,control (non-tumour bearing),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229872,,,train,sda-all,samples/GSE307719/GSM9229872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9229873,brain,disease,neoplasm,brain,metastasis,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,161235,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],GSE307719,GSE307719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005070,luna,,day 17 post-tumour inoculation (4T1Br4) mouse sample,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229873,,,train,sda-all,samples/GSE307719/GSM9229873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9229874,brain,disease,neoplasm,brain,metastasis,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,140703,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],GSE307719,GSE307719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,MONDO:0005070,luna,,day 23 post-tumour inoculation (4T1Br4) mouse sample,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229874,,,train,sda-all,samples/GSE307719/GSM9229874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.5700000000000001, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM9229875,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,108757,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],GSE307719,GSE307719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,day 23 TBCP-1 bearing mouse,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229875,,,train,sda-all,samples/GSE307719/GSM9229875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM9229876,meninges,normal,,dura mater,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,620550,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],GSE307719,GSE307719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002363,Brain,,luna,,control (non-tumour bearing) mouse,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229876,,,train,sda-all,samples/GSE307719/GSM9229876,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.81, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9229877,meninges,disease,,dura mater,metastasis,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,702001,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],GSE307719,GSE307719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uberon_chain,UBERON:0002363,Brain,,luna,,day17 4T1Br4 bearing mice,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229877,,,train,sda-all,samples/GSE307719/GSM9229877,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.49, ""life_stage"": 0.92}",uberon,low_confidence_annotation
GSM9229878,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,658179,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],GSE307719,GSE307719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,control (non-tumour bearing) mouse,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229878,,,train,sda-all,samples/GSE307719/GSM9229878,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9229879,meninges,disease,,dura mater,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,570198,Cellular and molecular signatures of the vascular microenvironment define the pre-metastatic brain and meninges [MERFISH],GSE307719,GSE307719,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uberon_chain,UBERON:0002363,Brain,,luna,,day 23 4T1Br4 bearing mice,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations;near_duplicate_observations,VERIFIED,,,,,,GSM9229879,,,train,sda-all,samples/GSE307719/GSM9229879,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.44, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",sample_kind;uberon,low_confidence_annotation
GSM9230200,bladder,not stated,,urinary bladder,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2813,Human bladder Visium spatial gene expression,GSE307744,GSE307744,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder dome,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,38606,counts,um,1.0,verified,3.9671993070303446,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9230200,,,train,sda-all,samples/GSE307744/GSM9230200,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.35000000000000003, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231917,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1865,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016;MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.161228656569482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231917,,,train,sda-all,samples/GSE307817/GSM9231917,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231918,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1373,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016;MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.164228098503857,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231918,,,train,sda-all,samples/GSE307817/GSM9231918,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231919,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,437,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016;MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.709905157284522,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231919,,,train,sda-all,samples/GSE307817/GSM9231919,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231920,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,977,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016;MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.681758251060366,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231920,,,train,sda-all,samples/GSE307817/GSM9231920,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231921,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,531,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016;MONDO:0005015,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,2.6416093722687055,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231921,,,train,sda-all,samples/GSE307817/GSM9231921,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231922,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1203,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016;MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.4090359724508272,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231922,,,train,sda-all,samples/GSE307817/GSM9231922,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231923,kidney,disease,chronic kidney disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1682,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005300,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,2.653114304899212,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231923,,,train,sda-all,samples/GSE307817/GSM9231923,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.24, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231924,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1394,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016;MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.176040421818985,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231924,,,train,sda-all,samples/GSE307817/GSM9231924,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231925,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1479,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016;MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.167202113000326,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231925,,,train,sda-all,samples/GSE307817/GSM9231925,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231926,kidney,disease,diabetic kidney disease;diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4608,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005016;MONDO:0005015,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.9883713253136746,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231926,,,train,sda-all,samples/GSE307817/GSM9231926,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231927,kidney,disease,kidney disorder,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1929,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005240,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.434761458276194,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231927,,,train,sda-all,samples/GSE307817/GSM9231927,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9231928,kidney,disease,kidney disorder;glucose metabolism disease,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4574,A MEF2C transcription factor network regulates proliferation of glomerular endothelial cells in diabetic kidney disease,GSE307817,GSE307817,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Kidney,MONDO:0005240;MONDO:0002908,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.192194202717311,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42055320,,GSM9231928,,,train,sda-all,samples/GSE307817/GSM9231928,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.21, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232991,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4288,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.808962765507367,platform_constant,4.808962765507367,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232991,,,train,hesrt,samples/GSE307866/GSM9232991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232992,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3486,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.806868380376575,platform_constant,4.806868380376575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232992,,,train,hesrt,samples/GSE307866/GSM9232992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232993,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3322,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.808840538894965,platform_constant,4.808840538894965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232993,,,train,hesrt,samples/GSE307866/GSM9232993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232994,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4254,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.810907190436752,platform_constant,4.810907190436752,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232994,,,train,hesrt,samples/GSE307866/GSM9232994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232995,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3425,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.8385201120401335,platform_constant,4.8385201120401335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232995,,,train,hesrt,samples/GSE307866/GSM9232995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9232996,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4271,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.832198251899152,platform_constant,4.832198251899152,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232996,,,train,hesrt,samples/GSE307866/GSM9232996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232997,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4539,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.160874690690052,platform_constant,5.160874690690052,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232997,,,train,hesrt,samples/GSE307866/GSM9232997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9232998,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3967,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.094139830580792,platform_constant,5.094139830580792,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232998,,,train,hesrt,samples/GSE307866/GSM9232998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9232999,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3099,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.0940641381036045,platform_constant,5.0940641381036045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9232999,,,train,hesrt,samples/GSE307866/GSM9232999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233000,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3482,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.094651772788411,platform_constant,5.094651772788411,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233000,,,train,hesrt,samples/GSE307866/GSM9233000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233001,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3185,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.09450101423569,platform_constant,5.09450101423569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233001,,,train,hesrt,samples/GSE307866/GSM9233001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233002,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4474,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.272949467625199,platform_constant,5.272949467625199,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233002,,,train,hesrt,samples/GSE307866/GSM9233002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233003,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3298,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.275654117539013,platform_constant,5.275654117539013,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233003,,,train,hesrt,samples/GSE307866/GSM9233003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233004,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2880,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.2782188612315615,platform_constant,5.2782188612315615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233004,,,train,hesrt,samples/GSE307866/GSM9233004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233005,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3043,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.283137075548274,platform_constant,5.283137075548274,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233005,,,train,hesrt,samples/GSE307866/GSM9233005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233006,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3796,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.934155788780548,platform_constant,4.934155788780548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233006,,,train,hesrt,samples/GSE307866/GSM9233006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233007,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3527,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.937846889128565,platform_constant,4.937846889128565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233007,,,train,hesrt,samples/GSE307866/GSM9233007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9233008,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3027,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.9327783346117995,platform_constant,4.9327783346117995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233008,,,train,hesrt,samples/GSE307866/GSM9233008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233009,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3755,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.934639360363995,platform_constant,4.934639360363995,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233009,,,train,hesrt,samples/GSE307866/GSM9233009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233010,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4056,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.812995669656054,platform_constant,4.812995669656054,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233010,,,train,hesrt,samples/GSE307866/GSM9233010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233011,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3640,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.814508403322837,platform_constant,4.814508403322837,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233011,,,train,hesrt,samples/GSE307866/GSM9233011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233012,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3790,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.804903468637043,platform_constant,4.804903468637043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233012,,,train,hesrt,samples/GSE307866/GSM9233012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233013,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2456,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.810791131450389,platform_constant,4.810791131450389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233013,,,train,hesrt,samples/GSE307866/GSM9233013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233014,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3128,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.875094504257718,platform_constant,4.875094504257718,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233014,,,train,hesrt,samples/GSE307866/GSM9233014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233015,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3040,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.880555452588563,platform_constant,4.880555452588563,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233015,,,train,hesrt,samples/GSE307866/GSM9233015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233016,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3555,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.876486490507056,platform_constant,4.876486490507056,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233016,,,train,hesrt,samples/GSE307866/GSM9233016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233017,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3026,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.876377526120111,platform_constant,4.876377526120111,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233017,,,train,hesrt,samples/GSE307866/GSM9233017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233018,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3681,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.833579786880013,platform_constant,4.833579786880013,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233018,,,train,hesrt,samples/GSE307866/GSM9233018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233019,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3596,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.829251537760302,platform_constant,4.829251537760302,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233019,,,train,hesrt,samples/GSE307866/GSM9233019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233020,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2771,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.827465310855587,platform_constant,4.827465310855587,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233020,,,train,hesrt,samples/GSE307866/GSM9233020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233021,brain,not stated,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3452,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.8290942041459735,platform_constant,4.8290942041459735,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233021,,,train,hesrt,samples/GSE307866/GSM9233021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233022,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3868,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.782340455651674,platform_constant,4.782340455651674,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233022,,,train,hesrt,samples/GSE307866/GSM9233022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233023,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3106,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.779491488247325,platform_constant,4.779491488247325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233023,,,train,hesrt,samples/GSE307866/GSM9233023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233024,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2450,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.786067044148819,platform_constant,4.786067044148819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233024,,,train,hesrt,samples/GSE307866/GSM9233024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233025,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3165,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.7894422863530615,platform_constant,4.7894422863530615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233025,,,train,hesrt,samples/GSE307866/GSM9233025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233026,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3035,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.89383072645857,platform_constant,4.89383072645857,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233026,,,train,hesrt,samples/GSE307866/GSM9233026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233027,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3060,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.89322930322115,platform_constant,4.89322930322115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233027,,,train,hesrt,samples/GSE307866/GSM9233027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233028,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3448,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.888201640643063,platform_constant,4.888201640643063,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233028,,,train,hesrt,samples/GSE307866/GSM9233028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233029,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3584,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.893608747811377,platform_constant,4.893608747811377,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233029,,,train,hesrt,samples/GSE307866/GSM9233029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9233030,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3477,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.703964825997944,platform_constant,4.703964825997944,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233030,,,train,hesrt,samples/GSE307866/GSM9233030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233031,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3670,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.709098678295646,platform_constant,4.709098678295646,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233031,,,train,hesrt,samples/GSE307866/GSM9233031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233032,brain,not stated,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3642,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.701176595399419,platform_constant,4.701176595399419,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233032,,,train,hesrt,samples/GSE307866/GSM9233032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233033,brain,normal,,pons,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3880,Impact of Alzheimer’s disease risk factors and local neuromelanin content on the transcriptomic landscape of the human locus coeruleus,GSE307866,GSE307866,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000988,pons,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.709005541093422,platform_constant,4.709005541093422,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41278831,,GSM9233033,,,train,hesrt,samples/GSE307866/GSM9233033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233658,other,normal,,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,16149,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,,luna,,,luna,not stated,,extracted field,Female,GSE307895:531429760,531429760,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233658,,,train,sda-all,samples/GSE307895/GSM9233658,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9233659,other,normal,,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,23709,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,,luna,,,luna,not stated,,extracted field,Female,GSE307895:531421966,531421966,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233659,,,train,sda-all,samples/GSE307895/GSM9233659,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9233660,other,normal,,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,8910,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,,luna,,,luna,not stated,,extracted field,Female,GSE307895:531420669,531420669,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233660,,,train,sda-all,samples/GSE307895/GSM9233660,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.81, ""life_stage"": 0.99}",,
GSM9233661,other,disease,bacterial vaginosis,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,22798,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,MONDO:0005316,luna,,,luna,not stated,,extracted field,Female,GSE307895:531416663,531416663,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233661,,,train,sda-all,samples/GSE307895/GSM9233661,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9233662,other,disease,bacterial vaginosis,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,14449,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,MONDO:0005316,luna,,,luna,not stated,,extracted field,Female,GSE307895:531414167,531414167,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233662,,,train,sda-all,samples/GSE307895/GSM9233662,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233663,other,disease,bacterial vaginosis,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,12665,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,MONDO:0005316,luna,,,luna,not stated,,extracted field,Female,GSE307895:531412668,531412668,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233663,,,train,sda-all,samples/GSE307895/GSM9233663,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233664,other,disease,bacterial vaginosis,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,10752,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,MONDO:0005316,mondo_predicate,,,luna,not stated,,extracted field,Female,GSE307895:531412668,531412668,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233664,,,train,sda-all,samples/GSE307895/GSM9233664,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9233666,other,disease,genital herpes,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,10947,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,MONDO:0005770,luna,,,luna,not stated,,extracted field,Female,GSE307895:531419765,531419765,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233666,,,train,sda-all,samples/GSE307895/GSM9233666,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233667,other,disease,genital herpes,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,3260,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,MONDO:0005770,luna,,,luna,not stated,,extracted field,Female,GSE307895:531438865,531438865,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233667,,,train,sda-all,samples/GSE307895/GSM9233667,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9233668,other,disease,bacterial vaginosis;genital herpes,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,1709,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,MONDO:0005316;MONDO:0005770,luna,,,luna,not stated,,extracted field,Female,GSE307895:531425664,531425664,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233668,,,train,sda-all,samples/GSE307895/GSM9233668,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9233669,other,disease,bacterial vaginosis;genital herpes,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,2669,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,MONDO:0005316;MONDO:0005770,luna,,,luna,not stated,,extracted field,Female,GSE307895:531425664,531425664,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233669,,,train,sda-all,samples/GSE307895/GSM9233669,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9233670,other,disease,genital herpes,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,20117,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,MONDO:0005770,luna,,,luna,not stated,,extracted field,Female,GSE307895:531415064,531415064,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233670,,,train,sda-all,samples/GSE307895/GSM9233670,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9233671,other,disease,genital herpes,,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,36234,Genital herpes shedding episodes associate with alterations in the spatial organization and activation of mucosal immune cells,GSE307895,GSE307895,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Vaginal tract biopsy,MONDO:0005770,luna,,,luna,not stated,,extracted field,Female,GSE307895:531412364,531412364,fresh frozen,fresh-frozen,release v3,imaging-based,Xenium,Xenium Human Multi-Tissue and Cancer Gene Expression,xenium-1.7.1.0,cell,541,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41252205,,GSM9233671,,,train,sda-all,samples/GSE307895/GSM9233671,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9234585,plant,normal,,,primary tissue,Ceratopteris richardii,,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,18863,Ribosomal heterogeneity revealed by a spatial transcriptomics in the water fern Ceratopteris richardii,GSE307951,GSE307951,49495,Ceratopteris richardii,49495,,False,False,GEO organism field,Ceratopteris richardii,,luna,,shoot tips,,luna,,,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,36813,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41635689,,GSM9234585,,,train,sda-all,samples/GSE307951/GSM9234585,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9235031,brain,normal,,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4872,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.869675086746545,platform_constant,4.869675086746545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235031,,,train,hesrt,samples/GSE307990/GSM9235031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235032,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4820,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.869675086746545,platform_constant,4.869675086746545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235032,,,train,hesrt,samples/GSE307990/GSM9235032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235033,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3560,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.869675086746545,platform_constant,4.869675086746545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235033,,,train,hesrt,samples/GSE307990/GSM9235033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235034,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4843,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.869675086746545,platform_constant,4.869675086746545,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235034,,,train,hesrt,samples/GSE307990/GSM9235034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235035,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4031,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.053609776508507,platform_constant,5.053609776508507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235035,,,train,hesrt,samples/GSE307990/GSM9235035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235036,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4880,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.053609776508507,platform_constant,5.053609776508507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235036,,,train,hesrt,samples/GSE307990/GSM9235036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235037,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3580,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.053609776508507,platform_constant,5.053609776508507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235037,,,train,hesrt,samples/GSE307990/GSM9235037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235038,brain,normal,,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3663,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.053609776508479,platform_constant,5.053609776508479,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235038,,,train,hesrt,samples/GSE307990/GSM9235038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235039,brain,normal,,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4335,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.257581435453031,platform_constant,5.257581435453031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235039,,,train,hesrt,samples/GSE307990/GSM9235039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235040,brain,normal,,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4601,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.257581435453031,platform_constant,5.257581435453031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235040,,,train,hesrt,samples/GSE307990/GSM9235040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235041,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4700,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.257581435453031,platform_constant,5.257581435453031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235041,,,train,hesrt,samples/GSE307990/GSM9235041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235042,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4583,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.257581435453031,platform_constant,5.257581435453031,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235042,,,train,hesrt,samples/GSE307990/GSM9235042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235043,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3647,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.156498318830742,platform_constant,5.156498318830742,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235043,,,train,hesrt,samples/GSE307990/GSM9235043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235044,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4214,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.156498318830742,platform_constant,5.156498318830742,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235044,,,train,hesrt,samples/GSE307990/GSM9235044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235045,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3231,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,5.156498318830742,platform_constant,5.156498318830742,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235045,,,train,hesrt,samples/GSE307990/GSM9235045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235046,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3851,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.992237791612399,platform_constant,4.992237791612399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235046,,,train,hesrt,samples/GSE307990/GSM9235046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235047,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3082,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.992237791612399,platform_constant,4.992237791612399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235047,,,train,hesrt,samples/GSE307990/GSM9235047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235048,brain,normal,,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3406,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.992237791612399,platform_constant,4.992237791612399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235048,,,train,hesrt,samples/GSE307990/GSM9235048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235049,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2843,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.992237791612399,platform_constant,4.992237791612399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235049,,,train,hesrt,samples/GSE307990/GSM9235049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235050,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3989,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.952887996883904,platform_constant,4.952887996883904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235050,,,train,hesrt,samples/GSE307990/GSM9235050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9235051,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4840,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.9528879968838755,platform_constant,4.9528879968838755,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235051,,,train,hesrt,samples/GSE307990/GSM9235051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235052,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3754,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.952887996883904,platform_constant,4.952887996883904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235052,,,train,hesrt,samples/GSE307990/GSM9235052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235053,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4059,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.95288799688389,platform_constant,4.95288799688389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235053,,,train,hesrt,samples/GSE307990/GSM9235053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235054,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4677,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.864621121051455,platform_constant,4.864621121051455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235054,,,train,hesrt,samples/GSE307990/GSM9235054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235055,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3919,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.4604696291893,platform_constant,4.4604696291893,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235055,,,train,hesrt,samples/GSE307990/GSM9235055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235056,brain,normal,,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3534,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.662635269839129,platform_constant,4.662635269839129,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235056,,,train,hesrt,samples/GSE307990/GSM9235056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235057,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4057,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.662635269839129,platform_constant,4.662635269839129,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235057,,,train,hesrt,samples/GSE307990/GSM9235057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235058,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2396,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.829241670274997,platform_constant,4.829241670274997,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235058,,,train,hesrt,samples/GSE307990/GSM9235058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9235059,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3865,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.829241670275024,platform_constant,4.829241670275024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235059,,,train,hesrt,samples/GSE307990/GSM9235059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235060,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2728,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.831918799570896,platform_constant,4.831918799570896,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235060,,,train,hesrt,samples/GSE307990/GSM9235060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9235061,brain,disease,Alzheimer disease,entorhinal cortex,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4186,Spatial and single cell transcriptomics in the human Entorhinal Cortex across diverse risk of Alzheimer’s disease [Visium],GSE307990,GSE307990,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002728,entorhinal cortex (ERC),MONDO:0004975,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,4.82924167027501,platform_constant,4.82924167027501,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41332786,,GSM9235061,,,train,hesrt,samples/GSE307990/GSM9235061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9238726,unknown,disease,cancer,,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,265308,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - CosMx Data,GSE308146,GSE308146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,mixed,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41266321,,GSM9238726,,,train,sda-all,samples/GSE308146/GSM9238726,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9238727,other,disease,cancer,,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,254503,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - CosMx Data,GSE308146,GSE308146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,mixed,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41266321,,GSM9238727,,,train,sda-all,samples/GSE308146/GSM9238727,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9238728,unknown,disease,cancer,,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,248044,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - CosMx Data,GSE308146,GSE308146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,mixed,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41266321,,GSM9238728,,,train,sda-all,samples/GSE308146/GSM9238728,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9238729,other,normal,,,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,178453,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - CosMx Data,GSE308146,GSE308146,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,mixed,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41266321,,GSM9238729,,,train,sda-all,samples/GSE308146/GSM9238729,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9238731,breast,disease,cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,179248,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - MERSCOPE Data,GSE308147,GSE308147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,285,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,41266321,,GSM9238731,,,train,sda-all,samples/GSE308147/GSM9238731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9238735,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,340026,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - MERSCOPE Data,GSE308147,GSE308147,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,285,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,41266321,,GSM9238735,,,train,sda-all,samples/GSE308147/GSM9238735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9238736,breast,disease,cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,375845,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,GSE308148,GSE308148,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,tumor,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41266321,,GSM9238736,,,train,sda-all,samples/GSE308148/GSM9238736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9238737,breast,disease,cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,346630,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,GSE308148,GSE308148,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,tumor,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,539,counts,um,1.0,verified,0.5000006892368769,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238737,,,train,sda-all,samples/GSE308148/GSM9238737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9238738,breast,disease,cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,410622,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,GSE308148,GSE308148,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,tumor,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999956375692536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238738,,,train,sda-all,samples/GSE308148/GSM9238738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9238739,lung,disease,cancer,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,395955,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,GSE308148,GSE308148,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,tumor,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999956375692536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238739,,,train,sda-all,samples/GSE308148/GSM9238739,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9238740,unknown,disease,cancer,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,395341,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,GSE308148,GSE308148,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,tumor,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999956375692536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238740,,,train,sda-all,samples/GSE308148/GSM9238740,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9238741,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,301975,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,GSE308148,GSE308148,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,normal tissue,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,538,counts,um,1.0,verified,0.5000055537924467,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238741,,,train,sda-all,samples/GSE308148/GSM9238741,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 0.97}",,
GSM9238742,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,251298,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,GSE308148,GSE308148,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,normal tissue,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,520,counts,um,1.0,verified,0.49999363665287944,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238742,,,train,sda-all,samples/GSE308148/GSM9238742,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9238743,unknown,normal,,,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,291023,Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - Xenium Data,GSE308148,GSE308148,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,normal tissue,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,534,counts,um,1.0,verified,0.4999922472606988,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,41266321,,GSM9238743,,,train,sda-all,samples/GSE308148/GSM9238743,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9239732,lymph node,not stated,,lymph node,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,10255,Integration of Imaging-based and Sequencing-based Spatial Omics Mapping on the Same Tissue Section via DBiTplus,GSE308167,GSE308167,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,Lymph node,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,other,9742,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,41540123,,GSM9239732,,,train,sda-all,samples/GSE308167/GSM9239732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9239733,lymph node,disease,,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,5972,Integration of Imaging-based and Sequencing-based Spatial Omics Mapping on the Same Tissue Section via DBiTplus,GSE308167,GSE308167,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,Lymph node (lymphoma),,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,other,9699,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,41540123,,GSM9239733,,,train,sda-all,samples/GSE308167/GSM9239733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9239734,lymph node,disease,B-cell chronic lymphocytic leukemia;diffuse large B-cell lymphoma,lymph node,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,4547,Integration of Imaging-based and Sequencing-based Spatial Omics Mapping on the Same Tissue Section via DBiTplus,GSE308167,GSE308167,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000029,Lymph node (lymphoma),MONDO:0004948;MONDO:0018905,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,other,9329,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,41540123,,GSM9239734,,,train,sda-all,samples/GSE308167/GSM9239734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9241214,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2042,Spatial transcriptomics for intrathoracic adhesion in mice,GSE308260,GSE308260,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,Saline-based talc solution was administered into the left thoracic cavity.,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.94384056711138,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42230567,,GSM9241214,,,train,sda-all,samples/GSE308260/GSM9241214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9241521,ovary,normal,,ovary,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1785,Integrated single-cell and spatial transcriptomics of ovarian immune landscape reveal role of distinct macrophages in classic galactosemia associated with premature ovarian insufficiency,GSE308275,GSE308275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.6644411731959305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42226209,,GSM9241521,,,train,sda-all,samples/GSE308275/GSM9241521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9241523,ovary,normal,,ovary,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1660,Integrated single-cell and spatial transcriptomics of ovarian immune landscape reveal role of distinct macrophages in classic galactosemia associated with premature ovarian insufficiency,GSE308275,GSE308275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.0154489088096,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42226209,,GSM9241523,,,train,sda-all,samples/GSE308275/GSM9241523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9246570,prostate,disease,adenocarcinoma,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1621,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,GSE308486,GSE308486,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostatic ductal adenocarcinoma (PDA),MONDO:0004970,luna,,PDA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.364271848160558,platform_constant,4.364271848160558,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246570,,,train,hesrt,samples/GSE308486/GSM9246570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9246575,prostate,disease,adenocarcinoma,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2119,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,GSE308486,GSE308486,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostatic ductal adenocarcinoma (PDA),MONDO:0004970,luna,,PDA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,12.375133858520606,platform_constant,12.375133858520606,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246575,,,train,hesrt,samples/GSE308486/GSM9246575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9246578,prostate,disease,adenocarcinoma,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3259,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,GSE308486,GSE308486,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Prostatic ductal adenocarcinoma (PDA),MONDO:0004970,luna,,PDA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.838148931901622,platform_constant,6.838148931901622,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246578,,,train,hesrt,samples/GSE308486/GSM9246578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9246579,prostate,disease,adenocarcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2671,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,GSE308486,GSE308486,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Non-Prostatic ductal adenocarcinoma (PDA),MONDO:0004970,luna,,non-PDA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.851260953060688,platform_constant,6.851260953060688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246579,,,train,hesrt,samples/GSE308486/GSM9246579,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.85, ""uberon"": 0.24, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9246580,prostate,disease,adenocarcinoma,prostate gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2620,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,GSE308486,GSE308486,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002367,Non-Prostatic ductal adenocarcinoma (PDA),MONDO:0004970,luna,,non-PDA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.866900411186507,platform_constant,7.866900411186507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246580,,,train,hesrt,samples/GSE308486/GSM9246580,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.16, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9246581,prostate,disease,adenocarcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4536,Novel biomarker for prostatic ductal adenocarcinoma identified using spatial transcriptomic analysis,GSE308486,GSE308486,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Non-Prostatic ductal adenocarcinoma (PDA),MONDO:0004970,luna,,non-PDA,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.844879429189247,platform_constant,6.844879429189247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9246581,,,train,hesrt,samples/GSE308486/GSM9246581,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.8300000000000001, ""uberon"": 0.27, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9247060,colon,normal,,caecum,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,1410192,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing (Stereoseq),GSE308507,GSE308507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001153,Cecum,,luna,,C57BL/6,age rule: age with unit,adult,13 weeks,extracted field,M,,,,,release v3,sequencing-based,Stereoseq,,,spot,56973,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM9247060,,,train,sda-all,samples/GSE308507/GSM9247060,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9247061,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,924006,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing (Stereoseq),GSE308507,GSE308507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Distal Colon,,luna,,C57BL/6,age rule: age with unit,adult,13 weeks,extracted field,M,,,,,release v3,sequencing-based,Stereoseq,,,spot,56973,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM9247061,,,train,sda-all,samples/GSE308507/GSM9247061,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9247062,colon,normal,,colon,primary tissue,Mus musculus,house mouse,adult,female,Stereo-seq,Stereo-seq,False,,820236,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing (Stereoseq),GSE308507,GSE308507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Proximal Colon,,luna,,C57BL/6,age rule: age with unit,adult,13 weeks,extracted field,F,,,,,release v3,sequencing-based,Stereoseq,,,spot,56973,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM9247062,,,train,sda-all,samples/GSE308507/GSM9247062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9247063,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,1400722,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing (Stereoseq),GSE308507,GSE308507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,Ileum,,luna,,C57BL/6,age rule: age with unit,adult,13 weeks,extracted field,M,,,,,release v3,sequencing-based,Stereoseq,,,spot,56973,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM9247063,,,train,sda-all,samples/GSE308507/GSM9247063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9247064,small intestine,normal,,small intestine,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,1627312,High Resolution Spatial Mapping of Microbiome-Host Interactions via in situ Polyadenylation and Spatial RNA Sequencing (Stereoseq),GSE308507,GSE308507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002108,Proximal Small Intestine,,luna,,C57BL/6,age rule: age with unit,adult,13 weeks,extracted field,M,,,,,release v3,sequencing-based,Stereoseq,,,spot,56973,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41792309,,GSM9247064,,,train,sda-all,samples/GSE308507/GSM9247064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9247574,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,6496,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247574,,,train,sda-all,samples/GSE308623/GSM9247574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9247575,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,25634,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247575,,,train,sda-all,samples/GSE308623/GSM9247575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247576,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,6875,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247576,,,train,sda-all,samples/GSE308623/GSM9247576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247577,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,6331,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247577,,,train,sda-all,samples/GSE308623/GSM9247577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247578,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,7131,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247578,,,train,sda-all,samples/GSE308623/GSM9247578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247579,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,28466,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247579,,,train,sda-all,samples/GSE308623/GSM9247579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247580,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,7122,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247580,,,train,sda-all,samples/GSE308623/GSM9247580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247581,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,7794,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247581,,,train,sda-all,samples/GSE308623/GSM9247581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9247582,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,28545,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247582,,,train,sda-all,samples/GSE308623/GSM9247582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9247583,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,9426,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247583,,,train,sda-all,samples/GSE308623/GSM9247583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247584,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,29432,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247584,,,train,sda-all,samples/GSE308623/GSM9247584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247585,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,7447,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247585,,,train,sda-all,samples/GSE308623/GSM9247585,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247586,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,41289,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247586,,,train,sda-all,samples/GSE308623/GSM9247586,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247587,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,5845,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247587,,,train,sda-all,samples/GSE308623/GSM9247587,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9247588,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,8988,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247588,,,train,sda-all,samples/GSE308623/GSM9247588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9247589,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,34448,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247589,,,train,sda-all,samples/GSE308623/GSM9247589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9247590,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,ST (legacy),ST (legacy),False,,9611,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247590,,,train,sda-all,samples/GSE308623/GSM9247590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9247591,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,8736,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247591,,,train,sda-all,samples/GSE308623/GSM9247591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9247592,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,8169,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247592,,,train,sda-all,samples/GSE308623/GSM9247592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9247593,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,8180,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247593,,,train,sda-all,samples/GSE308623/GSM9247593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9247594,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,8928,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247594,,,train,sda-all,samples/GSE308623/GSM9247594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9247595,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,8485,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247595,,,train,sda-all,samples/GSE308623/GSM9247595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 0.97}",,
GSM9247596,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,8258,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247596,,,train,sda-all,samples/GSE308623/GSM9247596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9247597,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,8220,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247597,,,train,sda-all,samples/GSE308623/GSM9247597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9247598,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,8653,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247598,,,train,sda-all,samples/GSE308623/GSM9247598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9247599,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,6299,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247599,,,train,sda-all,samples/GSE308623/GSM9247599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9247600,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,9405,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247600,,,train,sda-all,samples/GSE308623/GSM9247600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9247601,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,ST (legacy),ST (legacy),False,,9403,Spatial dynamics of brain development and neuroinflammation,GSE308623,GSE308623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Spatial Transcriptomics,,,spot,32285,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41193846,,GSM9247601,,,train,sda-all,samples/GSE308623/GSM9247601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9249289,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,7083,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,58,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249289,,,train,sda-all,samples/GSE308624/GSM9249289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249290,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,6677,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,48,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249290,,,train,sda-all,samples/GSE308624/GSM9249290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249291,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,6309,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,78,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249291,,,train,sda-all,samples/GSE308624/GSM9249291,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249292,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,6174,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,75,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249292,,,train,sda-all,samples/GSE308624/GSM9249292,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249293,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,6058,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,78,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249293,,,train,sda-all,samples/GSE308624/GSM9249293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249294,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,5808,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,58,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249294,,,train,sda-all,samples/GSE308624/GSM9249294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.64, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249295,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,5664,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,69,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249295,,,train,sda-all,samples/GSE308624/GSM9249295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249296,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,5436,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,43,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249296,,,train,sda-all,samples/GSE308624/GSM9249296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9249297,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,5408,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,68,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249297,,,train,sda-all,samples/GSE308624/GSM9249297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249298,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,5328,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,79,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249298,,,train,sda-all,samples/GSE308624/GSM9249298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249299,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,5127,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,55,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249299,,,train,sda-all,samples/GSE308624/GSM9249299,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249300,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,4435,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,75,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249300,,,train,sda-all,samples/GSE308624/GSM9249300,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249301,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,4375,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,42,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249301,,,train,sda-all,samples/GSE308624/GSM9249301,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249302,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,4219,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,77,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249302,,,train,sda-all,samples/GSE308624/GSM9249302,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249303,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,3931,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,58,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249303,,,train,sda-all,samples/GSE308624/GSM9249303,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9249304,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,3889,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,50,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249304,,,train,sda-all,samples/GSE308624/GSM9249304,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249305,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3783,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,72,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249305,,,train,sda-all,samples/GSE308624/GSM9249305,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249306,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3754,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,65,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249306,,,train,sda-all,samples/GSE308624/GSM9249306,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249307,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,3730,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,59,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249307,,,train,sda-all,samples/GSE308624/GSM9249307,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9249308,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3552,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,67,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249308,,,train,sda-all,samples/GSE308624/GSM9249308,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249309,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3533,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,67,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249309,,,train,sda-all,samples/GSE308624/GSM9249309,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9249310,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3512,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,69,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249310,,,train,sda-all,samples/GSE308624/GSM9249310,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9249311,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3456,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,71,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249311,,,train,sda-all,samples/GSE308624/GSM9249311,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249312,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3241,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,77,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249312,,,train,sda-all,samples/GSE308624/GSM9249312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249313,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,3200,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,52,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249313,,,train,sda-all,samples/GSE308624/GSM9249313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.46, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249314,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,3192,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,54,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249314,,,train,sda-all,samples/GSE308624/GSM9249314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249315,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3176,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,72,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249315,,,train,sda-all,samples/GSE308624/GSM9249315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249316,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,3141,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,64,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249316,,,train,sda-all,samples/GSE308624/GSM9249316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249317,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3122,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,80,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249317,,,train,sda-all,samples/GSE308624/GSM9249317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249318,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,3116,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,57,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249318,,,train,sda-all,samples/GSE308624/GSM9249318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249319,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3031,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,88,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249319,,,train,sda-all,samples/GSE308624/GSM9249319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249320,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3026,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,86,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249320,,,train,sda-all,samples/GSE308624/GSM9249320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249321,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,3021,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,78,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249321,,,train,sda-all,samples/GSE308624/GSM9249321,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249322,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,2950,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,65,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249322,,,train,sda-all,samples/GSE308624/GSM9249322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249323,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,2810,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,79,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249323,,,train,sda-all,samples/GSE308624/GSM9249323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249324,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,2762,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,75,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249324,,,train,sda-all,samples/GSE308624/GSM9249324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249325,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,2488,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,84,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249325,,,train,sda-all,samples/GSE308624/GSM9249325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249326,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,2441,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,74,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249326,,,train,sda-all,samples/GSE308624/GSM9249326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249327,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,2390,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,54,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249327,,,train,sda-all,samples/GSE308624/GSM9249327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249328,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,2384,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,62,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249328,,,train,sda-all,samples/GSE308624/GSM9249328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9249329,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,2312,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,54,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249329,,,train,sda-all,samples/GSE308624/GSM9249329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249330,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,2304,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,84,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249330,,,train,sda-all,samples/GSE308624/GSM9249330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249331,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,2157,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,73,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249331,,,train,sda-all,samples/GSE308624/GSM9249331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9249332,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,2014,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,72,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249332,,,train,sda-all,samples/GSE308624/GSM9249332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249333,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,1993,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,53,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249333,,,train,sda-all,samples/GSE308624/GSM9249333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249334,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,1982,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,74,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249334,,,train,sda-all,samples/GSE308624/GSM9249334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9249335,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,1924,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,80,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249335,,,train,sda-all,samples/GSE308624/GSM9249335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249336,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,1846,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,56,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249336,,,train,sda-all,samples/GSE308624/GSM9249336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249337,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,1737,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,56,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249337,,,train,sda-all,samples/GSE308624/GSM9249337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249338,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,1694,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,58,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249338,,,train,sda-all,samples/GSE308624/GSM9249338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249339,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,1483,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,73,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249339,,,train,sda-all,samples/GSE308624/GSM9249339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249340,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,1447,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,82,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249340,,,train,sda-all,samples/GSE308624/GSM9249340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249341,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,1366,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,77,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249341,,,train,sda-all,samples/GSE308624/GSM9249341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249342,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,1339,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,46,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249342,,,train,sda-all,samples/GSE308624/GSM9249342,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.51, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249343,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,1329,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,64,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249343,,,train,sda-all,samples/GSE308624/GSM9249343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9249344,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,1312,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,83,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249344,,,train,sda-all,samples/GSE308624/GSM9249344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249345,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,1267,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,35,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249345,,,train,sda-all,samples/GSE308624/GSM9249345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9249346,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,1126,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,83,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249346,,,train,sda-all,samples/GSE308624/GSM9249346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249347,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,1107,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,63,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249347,,,train,sda-all,samples/GSE308624/GSM9249347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.99, ""uberon"": 0.77, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249348,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,1070,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,68,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249348,,,train,sda-all,samples/GSE308624/GSM9249348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.91}",,
GSM9249349,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,1045,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,63,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249349,,,train,sda-all,samples/GSE308624/GSM9249349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9249350,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,1029,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,61,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249350,,,train,sda-all,samples/GSE308624/GSM9249350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249351,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,1007,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,75,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249351,,,train,sda-all,samples/GSE308624/GSM9249351,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249352,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,797,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,82,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249352,,,train,sda-all,samples/GSE308624/GSM9249352,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249353,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,699,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,87,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249353,,,train,sda-all,samples/GSE308624/GSM9249353,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249354,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,580,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,73,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249354,,,train,sda-all,samples/GSE308624/GSM9249354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249355,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,547,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,62,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249355,,,train,sda-all,samples/GSE308624/GSM9249355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9249356,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,406,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,71,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249356,,,train,sda-all,samples/GSE308624/GSM9249356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9249357,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,228,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,77,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249357,,,train,sda-all,samples/GSE308624/GSM9249357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9249358,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,aged,unknown,CosMx,CosMx,False,,202,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,aged,82,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249358,,,train,sda-all,samples/GSE308624/GSM9249358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9249359,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,101,Spatial and functional dissection of cancer-associated fibroblasts-mediated immune modulation in H. pylori-associated gastric cancer,GSE308624,GSE308624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000945,gastric cancer,MONDO:0001056,luna,,,age rule: bare number read as years,adult,42,not stated,2,,,,,release v3,imaging-based,CosMx,,,cell,1000,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,41194113,,GSM9249359,,,train,sda-all,samples/GSE308624/GSM9249359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 0.99}",sample_kind,low_confidence_annotation
GSM9251639,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,20879,Divergent cytotoxic and immunomodulatory immune programs distinguish morbilliform drug eruption from SDRIFE,GSE308697,GSE308697,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9392,counts,um,1.0,verified,0.49998709477596526,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251639,,,train,sda-all,samples/GSE308697/GSM9251639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9251640,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,13841,Divergent cytotoxic and immunomodulatory immune programs distinguish morbilliform drug eruption from SDRIFE,GSE308697,GSE308697,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9392,counts,um,1.0,verified,0.4999837892006602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251640,,,train,sda-all,samples/GSE308697/GSM9251640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9251641,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,8629,Divergent cytotoxic and immunomodulatory immune programs distinguish morbilliform drug eruption from SDRIFE,GSE308697,GSE308697,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9392,counts,um,1.0,verified,0.49999655615759026,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251641,,,train,sda-all,samples/GSE308697/GSM9251641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9251642,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,8409,Divergent cytotoxic and immunomodulatory immune programs distinguish morbilliform drug eruption from SDRIFE,GSE308697,GSE308697,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9392,counts,um,1.0,verified,0.5000171703296703,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251642,,,train,sda-all,samples/GSE308697/GSM9251642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9251661,lung,disease,cancer,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,21943,YAP-driven stemness and TEAD-induced neuroendocrine cells drive resistance to KRASG12C therapies in metastatic colorectal cancer [Xenium Spatial Transcriptomics],GSE308699,GSE308699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0004992,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,494,counts,um,1.0,verified,0.5000140457744396,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251661,,,train,sda-all,samples/GSE308699/GSM9251661,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.42, ""disease_status"": 0.31, ""uberon"": 0.97, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9251662,other,disease,colorectal cancer,,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,25228,YAP-driven stemness and TEAD-induced neuroendocrine cells drive resistance to KRASG12C therapies in metastatic colorectal cancer [Xenium Spatial Transcriptomics],GSE308699,GSE308699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Retroperitoneal,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,499,counts,um,1.0,verified,0.4999931072511718,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251662,,,train,sda-all,samples/GSE308699/GSM9251662,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.87, ""disease_status"": 0.59, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9251663,bone,disease,colorectal cancer,bone element,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,5300,YAP-driven stemness and TEAD-induced neuroendocrine cells drive resistance to KRASG12C therapies in metastatic colorectal cancer [Xenium Spatial Transcriptomics],GSE308699,GSE308699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001474,Bone,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,422,counts,um,1.0,verified,0.499997941370224,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251663,,,train,sda-all,samples/GSE308699/GSM9251663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.31, ""uberon"": 0.53, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9251664,colon,disease,colorectal cancer,colon,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,56993,YAP-driven stemness and TEAD-induced neuroendocrine cells drive resistance to KRASG12C therapies in metastatic colorectal cancer [Xenium Spatial Transcriptomics],GSE308699,GSE308699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,Colon,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,499,counts,um,1.0,verified,0.4999821200030114,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251664,,,train,sda-all,samples/GSE308699/GSM9251664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.64, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9251665,liver,disease,colorectal cancer,liver,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7414,YAP-driven stemness and TEAD-induced neuroendocrine cells drive resistance to KRASG12C therapies in metastatic colorectal cancer [Xenium Spatial Transcriptomics],GSE308699,GSE308699,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,MONDO:0005575,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,422,counts,um,1.0,verified,0.49998504784689,VERIFIED,FAILED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9251665,,,train,sda-all,samples/GSE308699/GSM9251665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9256395,skin,normal,,pilosebaceous unit,primary tissue,Homo sapiens,human,not stated,female,Visium HD,Visium HD,True,H&E,284341,An Integrated Transcriptomics Atlas of Healthy Human Skin Focusing on the Pilosebaceous Unit,GSE308929,GSE308929,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0011932,Skin,,luna,Healthy,,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.2772974850995897,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9256395,,,train,sda-all,samples/GSE308929/GSM9256395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9256396,skin,normal,,pilosebaceous unit,primary tissue,Homo sapiens,human,not stated,female,Visium HD,Visium HD,True,H&E,269006,An Integrated Transcriptomics Atlas of Healthy Human Skin Focusing on the Pilosebaceous Unit,GSE308929,GSE308929,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0011932,Skin,,luna,Healthy,,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.0742431304774083,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9256396,,,train,sda-all,samples/GSE308929/GSM9256396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9256713,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,adult,female,Stereo-seq,Stereo-seq,False,,68159,Peripheral glia constitute a pro-reparative niche triggering skin wound healing [Spatial Transcriptomics],GSE308952,GSE308952,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Regenerating skin wound,,luna,,Tmx intraperitoneal,luna,adult,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,46499,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41512873,,GSM9256713,,,train,sda-all,samples/GSE308952/GSM9256713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9256795,liver,disease,hepatocellular carcinoma,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,Xenium,Xenium,True,fluorescence: DAPI,162483,The origin of hepatocellular carcinoma is regulated by metabolic zonation [Xenium],GSE308959,GSE308959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0007256,mondo_predicate (Luna: perturbation),,Gls2-CreERT2; Ctnnb1(ex3)fl/+; Arid2fl/+; Rosa26LSL-tdTomato/+,luna,juvenile,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999974125439868,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41196951,,GSM9256795,,,train,sda-all,samples/GSE308959/GSM9256795,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.81, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.24}",disease_status;life_stage,low_confidence_annotation
GSM9256796,liver,disease,hepatocellular carcinoma,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,121919,The origin of hepatocellular carcinoma is regulated by metabolic zonation [Xenium],GSE308959,GSE308959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0007256,mondo_predicate (Luna: perturbation),,Cyp1a2-CreERT2; Ctnnb1(ex3)fl/+; Arid2fl/+; Rosa26LSL-tdTomato/+,luna,adult,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000090575021996,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41196951,,GSM9256796,,,train,sda-all,samples/GSE308959/GSM9256796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM9256797,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,156456,The origin of hepatocellular carcinoma is regulated by metabolic zonation [Xenium],GSE308959,GSE308959,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,WT,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999930964653903,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41196951,,GSM9256797,,,train,sda-all,samples/GSE308959/GSM9256797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM9264148,adrenal gland,disease,neuroblastoma,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,7064,Transcriptional programs dictating tumor cell fate decisions in neuroblastoma lymph node metastasis [spatial transcriptomics],GSE309269,GSE309269,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,neuroblastoma (primary),MONDO:0005072,luna,neuroblastoma,primary,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.827746402951347,platform_constant,4.827746402951347,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,41279557;42467756,,GSM9264148,,,test,hesrt,samples/GSE309269/GSM9264148,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9264149,lymph node,disease,neuroblastoma,cervical lymph node,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4705,Transcriptional programs dictating tumor cell fate decisions in neuroblastoma lymph node metastasis [spatial transcriptomics],GSE309269,GSE309269,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002429,neuroblastoma (lymph node metastasis),MONDO:0005072,luna,neuroblastoma,lymph node metastasis,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.012619659462263,platform_constant,4.012619659462263,HESRT_HUMAN_REVIEW,,,image_partial_coverage,zero_count_observations,human_visual_review,,,,41279557;42467756,,GSM9264149,,,test,hesrt,samples/GSE309269/GSM9264149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9266971,eye,normal,,eye,primary tissue,Anolis carolinensis,green anole,not stated,unknown,Visium,Visium,True,H&E,636,Comparative Eye Transcriptome Atlas,GSE309408,GSE309408,28377,Anolis carolinensis,28377,,False,False,GEO organism field,Anolis carolinensis,Anolis carolinensis,luna,UBERON:0000970,Eye,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21554,counts,pixel,0.34364058265981656,platform_constant,0.5000138771828966,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266971,,,train,hesrt,samples/GSE309408/GSM9266971,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9266972,eye,normal,,eye,primary tissue,Anolis carolinensis,green anole,not stated,unknown,Visium,Visium,True,H&E,505,Comparative Eye Transcriptome Atlas,GSE309408,GSE309408,28377,Anolis carolinensis,28377,,False,False,GEO organism field,Anolis carolinensis,Anolis carolinensis,luna,UBERON:0000970,Eye,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,21554,counts,pixel,0.3436426116838488,platform_constant,0.5000008426743788,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266972,,,train,hesrt,samples/GSE309408/GSM9266972,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9266973,eye,normal,,eye,primary tissue,Taeniopygia guttata,zebra finch,not stated,unknown,Visium,Visium,True,H&E,1025,Comparative Eye Transcriptome Atlas,GSE309408,GSE309408,59729,Taeniopygia guttata,59729,,False,False,GEO organism field,Taeniopygia guttata,Taeniopygia guttata,luna,UBERON:0000970,Eye,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,16619,counts,pixel,0.3436344958033582,platform_constant,0.5000013281685175,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266973,,,train,hesrt,samples/GSE309408/GSM9266973,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.48, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM9266974,eye,normal,,retina,primary tissue,Taeniopygia guttata,zebra finch,not stated,unknown,Visium,Visium,True,H&E,777,Comparative Eye Transcriptome Atlas,GSE309408,GSE309408,59729,Taeniopygia guttata,59729,,False,False,GEO organism field,Taeniopygia guttata,Taeniopygia guttata,luna,UBERON:0000966,Eye,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,16619,counts,pixel,0.3436344958033582,platform_constant,0.49999331791264384,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266974,,,train,hesrt,samples/GSE309408/GSM9266974,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.71, ""life_stage"": 0.99}",,
GSM9266975,eye,normal,,eye,primary tissue,Taeniopygia guttata,zebra finch,not stated,unknown,Visium,Visium,True,H&E,1109,Comparative Eye Transcriptome Atlas,GSE309408,GSE309408,59729,Taeniopygia guttata,59729,,False,False,GEO organism field,Taeniopygia guttata,Taeniopygia guttata,luna,UBERON:0000970,Eye,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,16619,counts,pixel,0.3436344958033582,platform_constant,0.5000022912852732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266975,,,train,hesrt,samples/GSE309408/GSM9266975,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9266976,eye,normal,,retina,primary tissue,Taeniopygia guttata,zebra finch,not stated,unknown,Visium,Visium,True,H&E,479,Comparative Eye Transcriptome Atlas,GSE309408,GSE309408,59729,Taeniopygia guttata,59729,,False,False,GEO organism field,Taeniopygia guttata,Taeniopygia guttata,luna,UBERON:0000966,Eye,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,16619,counts,pixel,0.3436344958033582,platform_constant,0.49999603693032,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266976,,,train,hesrt,samples/GSE309408/GSM9266976,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.51, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9266977,eye,normal,,retina,primary tissue,Columba livia,rock pigeon,not stated,unknown,Visium,Visium,True,H&E,1563,Comparative Eye Transcriptome Atlas,GSE309408,GSE309408,8932,Columba livia,8932,,False,False,GEO organism field,Columba livia,,luna,UBERON:0000966,Eye,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,15392,counts,pixel,0.3424657534246575,platform_constant,0.4999871395674658,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266977,,,train,hesrt,samples/GSE309408/GSM9266977,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9266978,eye,normal,,retina,primary tissue,Gallus gallus,chicken,not stated,unknown,Visium,Visium,True,H&E,1522,Comparative Eye Transcriptome Atlas,GSE309408,GSE309408,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,luna,UBERON:0000966,Eye,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17007,counts,pixel,0.34364058265981656,platform_constant,0.49999460250972005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41565811,,GSM9266978,,,train,hesrt,samples/GSE309408/GSM9266978,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9268669,lymph node,normal,,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,19329,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268669,,,train,sda-all,samples/GSE309522/GSM9268669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9268670,lymph node,normal,,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,32791,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,,luna,,No treatment,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268670,,,train,sda-all,samples/GSE309522/GSM9268670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9268671,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,105002,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268671,,,train,sda-all,samples/GSE309522/GSM9268671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268672,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,98814,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268672,,,train,sda-all,samples/GSE309522/GSM9268672,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268673,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,96874,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268673,,,train,sda-all,samples/GSE309522/GSM9268673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9268674,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,95630,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268674,,,train,sda-all,samples/GSE309522/GSM9268674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268675,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,111719,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268675,,,train,sda-all,samples/GSE309522/GSM9268675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268676,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,132481,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268676,,,train,sda-all,samples/GSE309522/GSM9268676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268677,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,90338,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268677,,,train,sda-all,samples/GSE309522/GSM9268677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9268678,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,206667,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268678,,,train,sda-all,samples/GSE309522/GSM9268678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9268679,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,216320,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268679,,,train,sda-all,samples/GSE309522/GSM9268679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9268680,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,238897,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268680,,,train,sda-all,samples/GSE309522/GSM9268680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9268681,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,129407,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268681,,,train,sda-all,samples/GSE309522/GSM9268681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268682,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,292138,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268682,,,train,sda-all,samples/GSE309522/GSM9268682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9268683,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,203316,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268683,,,train,sda-all,samples/GSE309522/GSM9268683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9268684,lymph node,disease,salmonellosis,mesenteric lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,151422,Eosinophils enhance granuloma-mediated control of persistent Salmonella infection,GSE309522,GSE309522,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002509,MLN,MONDO:0000827,luna,,STm SL1344 1e8 CFU oral,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41272146,,GSM9268684,,,train,sda-all,samples/GSE309522/GSM9268684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM9269270,head and neck,normal,,vestibular ganglion,primary tissue,Mus musculus,house mouse,not stated,male,Visium HD,Visium HD,True,H&E,73354,Morphological and Functional Diversity of Spatially Resolved Vestibular Ganglion Neuron Cell Types,GSE309565,GSE309565,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0002824,vestibular ganglion,,luna,,Wildtype,luna,not stated,,sample text,,,,,,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,0.9172001277733453,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9269270,,,test,sda-all,samples/GSE309565/GSM9269270,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9269271,head and neck,perturbation,,vestibular ganglion,primary tissue,Mus musculus,house mouse,not stated,female,Visium HD,Visium HD,True,H&E,33534,Morphological and Functional Diversity of Spatially Resolved Vestibular Ganglion Neuron Cell Types,GSE309565,GSE309565,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0002824,vestibular ganglion,,luna,,Tmie ko,luna,not stated,,sample text,,,,,,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,1.0378371158232178,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9269271,,,test,sda-all,samples/GSE309565/GSM9269271,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9283597,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,2381,Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice [Spatial Transcriptomics],GSE309857,GSE309857,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,TDP-43 KO,luna,neonatal or infant,Post natal day 15,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42420559,,GSM9283597,,,train,sda-all,samples/GSE309857/GSM9283597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9283598,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,2324,Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice [Spatial Transcriptomics],GSE309857,GSE309857,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,TDP-43 WT,luna,neonatal or infant,Post natal day 15,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42420559,,GSM9283598,,,train,sda-all,samples/GSE309857/GSM9283598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9283599,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,2530,Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice [Spatial Transcriptomics],GSE309857,GSE309857,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,TDP-43 KO,luna,neonatal or infant,Post natal day 15,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42420559,,GSM9283599,,,train,sda-all,samples/GSE309857/GSM9283599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9283600,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,False,,2499,Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice [Spatial Transcriptomics],GSE309857,GSE309857,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,TDP-43 WT,luna,neonatal or infant,Post natal day 15,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42420559,,GSM9283600,,,train,sda-all,samples/GSE309857/GSM9283600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9287769,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Rattus norvegicus,Norway rat,adult,unknown,Visium,Visium,True,H&E,2789,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,GSE310073,GSE310073,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001134,muscle,,luna,,"Oligomer-treated volumetric muscle loss, 8 weeks",luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25627,counts,pixel,5.041293105627904,platform_constant,5.041293105627904,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287769,,,train,hesrt,samples/GSE310073/GSM9287769,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 0.91, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9287770,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Rattus norvegicus,Norway rat,adult,unknown,Visium,Visium,True,H&E,1877,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,GSE310073,GSE310073,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001134,muscle,,luna,,"Oligomer-treated volumetric muscle loss, 8 weeks",luna,adult,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25627,counts,pixel,5.044573995940105,platform_constant,5.044573995940105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287770,,,train,hesrt,samples/GSE310073/GSM9287770,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.61, ""uberon"": 0.91, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9287771,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,2159,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,GSE310073,GSE310073,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001134,muscle,,luna,,"Oligomer-treated volumetric muscle loss, 2 weeks",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25627,counts,pixel,5.00897396334364,platform_constant,5.00897396334364,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287771,,,train,hesrt,samples/GSE310073/GSM9287771,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.48, ""uberon"": 0.96, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9287772,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1941,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,GSE310073,GSE310073,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001134,muscle,,luna,,"Oligomer-treated volumetric muscle loss, 2 weeks",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25627,counts,pixel,5.039860635012982,platform_constant,5.039860635012982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287772,,,train,hesrt,samples/GSE310073/GSM9287772,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.53, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9287773,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,2538,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,GSE310073,GSE310073,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001134,muscle,,luna,,"Oligomer-treated volumetric muscle loss, 2 weeks",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25627,counts,pixel,4.4688911311082675,platform_constant,4.4688911311082675,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287773,,,train,hesrt,samples/GSE310073/GSM9287773,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.44, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9287774,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,True,H&E,1865,Immunotolerant Oligomer Scaffolds Promote Regenerative Remodeling and Improved Muscle Structure and Function After Volumetric Muscle Loss,GSE310073,GSE310073,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0001134,muscle,,luna,,"Oligomer-treated volumetric muscle loss, 2 weeks",luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25627,counts,pixel,4.468891131108228,platform_constant,4.468891131108228,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41796221,,GSM9287774,,,train,hesrt,samples/GSE310073/GSM9287774,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.68, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9288671,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Curio Trekker,False,,18948,Mucosal vaccination transcends pathogen boundaries to protect from diverse respiratory threats,GSE310116,GSE310116,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,GLA-3M-052-LS+OVA,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,30881,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41712698,,GSM9288671,,,train,sda-all,samples/GSE310116/GSM9288671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9288673,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Curio Trekker,False,,19873,Mucosal vaccination transcends pathogen boundaries to protect from diverse respiratory threats,GSE310116,GSE310116,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,anti-cd4cd8 treatment,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,31188,counts,unstated,,unresolved,,,,,units_unstated,near_duplicate_observations,VERIFIED,,,,41712698,,GSM9288673,,,train,sda-all,samples/GSE310116/GSM9288673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9288675,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Curio Trekker,False,,14317,Mucosal vaccination transcends pathogen boundaries to protect from diverse respiratory threats,GSE310116,GSE310116,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,NAÏVE,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,31617,counts,unstated,,unresolved,,,,,units_unstated,near_duplicate_observations,VERIFIED,,,,41712698,,GSM9288675,,,train,sda-all,samples/GSE310116/GSM9288675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9288677,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Curio Trekker,False,,13617,Mucosal vaccination transcends pathogen boundaries to protect from diverse respiratory threats,GSE310116,GSE310116,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,"GLA-3M-052-LS+OVA, and anti-cd4cd8 treatment",luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,30694,counts,unstated,,unresolved,,,,,units_unstated,near_duplicate_observations,VERIFIED,,,,41712698,,GSM9288677,,,train,sda-all,samples/GSE310116/GSM9288677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9289223,head and neck,normal,,beak,primary tissue,Anas platyrhynchos,mallard,embryonic,unknown,Stereo-seq,Stereo-seq,False,,22674,Spatial transcriptome sequencing of chicken and duck beaks,GSE310129,GSE310129,8839,Anas platyrhynchos,8839,,False,False,GEO organism field,Anas platyrhynchos,,uberon_chain,UBERON:0005094,Embryo beak,,luna,,,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,20858,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9289223,,,train,sda-all,samples/GSE310129/GSM9289223,sda-tissue-disease-2.4,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9289224,head and neck,normal,,beak,primary tissue,Gallus gallus,chicken,embryonic,unknown,Stereo-seq,Stereo-seq,False,,43687,Spatial transcriptome sequencing of chicken and duck beaks,GSE310129,GSE310129,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,Gallus gallus,uberon_chain,UBERON:0005094,Embryo beak,,luna,,,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,20150,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9289224,,,train,sda-all,samples/GSE310129/GSM9289224,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9289225,head and neck,normal,,beak,primary tissue,Anas platyrhynchos,mallard,embryonic,unknown,Stereo-seq,Stereo-seq,False,,46306,Spatial transcriptome sequencing of chicken and duck beaks,GSE310129,GSE310129,8839,Anas platyrhynchos,8839,,False,False,GEO organism field,Anas platyrhynchos,,uberon_chain,UBERON:0005094,Embryo beak,,luna,,,luna,embryonic,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,21658,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9289225,,,train,sda-all,samples/GSE310129/GSM9289225,sda-tissue-disease-2.4,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9290277,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,60275,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,61,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000051036031438,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9290277,,,train,sda-all,samples/GSE310162/GSM9290277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9290278,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,46291,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,61,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999886208466077,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9290278,,,train,sda-all,samples/GSE310162/GSM9290278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9290279,lung,normal,,lung,primary tissue,Homo sapiens,human,aged,female,Xenium,Xenium,True,fluorescence: DAPI,86009,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,aged,72,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000203832042397,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9290279,,,train,sda-all,samples/GSE310162/GSM9290279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9290280,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,55869,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,60,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998465787051244,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9290280,,,train,sda-all,samples/GSE310162/GSM9290280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714910,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,184435,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,57,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999927181638122,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714910,,,train,sda-all,samples/GSE310162/GSM9714910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9714911,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,142916,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,57,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999492351428176,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714911,,,train,sda-all,samples/GSE310162/GSM9714911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714912,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,279263,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,47,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714912,,,train,sda-all,samples/GSE310162/GSM9714912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714913,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,315205,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,47,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000102634918265,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714913,,,train,sda-all,samples/GSE310162/GSM9714913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714914,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,168520,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,51,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999652359321406,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714914,,,train,sda-all,samples/GSE310162/GSM9714914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714915,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,117403,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,51,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000025725457913,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714915,,,train,sda-all,samples/GSE310162/GSM9714915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714916,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,32382,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,58,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997833622183707,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714916,,,train,sda-all,samples/GSE310162/GSM9714916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9714917,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,97685,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,58,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998781478472787,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714917,,,train,sda-all,samples/GSE310162/GSM9714917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9714918,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,70695,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,50,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500028801843318,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714918,,,train,sda-all,samples/GSE310162/GSM9714918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714919,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,133729,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,50,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999965668772315,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714919,,,train,sda-all,samples/GSE310162/GSM9714919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714920,lung,normal,,lung,primary tissue,Homo sapiens,human,aged,female,Xenium,Xenium,True,fluorescence: DAPI,143969,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,aged,72,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999959638359703,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714920,,,train,sda-all,samples/GSE310162/GSM9714920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714921,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,31334,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,60,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499988174077578,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714921,,,train,sda-all,samples/GSE310162/GSM9714921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714922,lung,normal,,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,89890,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,aged,72,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999857515062693,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714922,,,train,sda-all,samples/GSE310162/GSM9714922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714923,lung,normal,,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,109659,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,aged,72,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500023854961832,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714923,,,train,sda-all,samples/GSE310162/GSM9714923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9714924,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,67502,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,57,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999961268332989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714924,,,train,sda-all,samples/GSE310162/GSM9714924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714925,lung,disease,pulmonary emphysema,lung,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,67326,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0004849,luna,COPD,,age rule: bare number read as years,adult,57,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000117980179329,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714925,,,train,sda-all,samples/GSE310162/GSM9714925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714926,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,106542,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,56,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000085875240451,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714926,,,train,sda-all,samples/GSE310162/GSM9714926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9714927,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,71688,Heterogeneity in B- and epithelial-cell senescence in the pathogenesis of COPD/emphysema [Xenium],GSE310162,GSE310162,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,Normal,,age rule: bare number read as years,adult,56,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998452331820054,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9714927,,,train,sda-all,samples/GSE310162/GSM9714927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9294393,blood vessel,disease,,saphenous vein,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1101,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,GSE310351,GSE310351,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007318,Human saphenous vein,,luna,,Day 0,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.062508830758159,platform_constant,4.062508830758159,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294393,,,train,hesrt,samples/GSE310351/GSM9294393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9294394,blood vessel,disease,,saphenous vein,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1009,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,GSE310351,GSE310351,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007318,Human saphenous vein,,luna,,Day 7,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.980981506829042,platform_constant,4.980981506829042,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294394,,,train,hesrt,samples/GSE310351/GSM9294394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9294395,blood vessel,disease,,saphenous vein,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,897,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,GSE310351,GSE310351,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007318,Human saphenous vein,,luna,,Day 0,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.067206418711963,platform_constant,4.067206418711963,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294395,,,train,hesrt,samples/GSE310351/GSM9294395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9294396,blood vessel,disease,,saphenous vein,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1055,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,GSE310351,GSE310351,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007318,Human saphenous vein,,luna,,Day 7,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.875617193654191,platform_constant,4.875617193654191,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294396,,,train,hesrt,samples/GSE310351/GSM9294396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9294397,blood vessel,disease,,saphenous vein,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,776,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,GSE310351,GSE310351,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007318,Human saphenous vein,,luna,,Day 0,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.880800875419342,platform_constant,4.880800875419342,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294397,,,train,hesrt,samples/GSE310351/GSM9294397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9294398,blood vessel,disease,,saphenous vein,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,837,Spatial transcriptomic profiling of human saphenous vein grafts reveals molecular remodeling and smooth muscle cell phenotypic transition during early neointima proliferation,GSE310351,GSE310351,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007318,Human saphenous vein,,luna,,Day 7,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.981450256560158,platform_constant,4.981450256560158,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41569144,,GSM9294398,,,train,hesrt,samples/GSE310351/GSM9294398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9294399,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,124165,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],GSE310352,GSE310352+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,PDAC tumor resection,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,989,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294399,,,train,sda-all,samples/GSE310352/GSM9294399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294400,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,118096,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],GSE310352,GSE310352+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,PDAC tumor resection,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,989,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294400,,,train,sda-all,samples/GSE310352/GSM9294400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294401,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,67100,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],GSE310352,GSE310352+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,PDAC tumor resection,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,989,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294401,,,train,sda-all,samples/GSE310352/GSM9294401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294402,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,88103,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],GSE310352,GSE310352+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,PDAC tumor resection,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,989,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294402,,,train,sda-all,samples/GSE310352/GSM9294402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294403,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,89004,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],GSE310352,GSE310352+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,PDAC tumor resection,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,989,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294403,,,train,sda-all,samples/GSE310352/GSM9294403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294404,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,57464,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],GSE310352,GSE310352+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,PDAC tumor resection,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,989,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294404,,,train,sda-all,samples/GSE310352/GSM9294404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294405,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,73401,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],GSE310352,GSE310352+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,PDAC tumor resection,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,989,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294405,,,train,sda-all,samples/GSE310352/GSM9294405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9294406,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,42857,In situ multi-modal characterization of pancreatic cancer reveals tumor cell identity as a defining factor of the surrounding microenvironment [Nanostring CosMx],GSE310352,GSE310352+GSE310353,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,PDAC tumor resection,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,989,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,41533516,,GSM9294406,,,train,sda-all,samples/GSE310352/GSM9294406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9295072,heart,disease,heart disorder,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,20647,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,GSE310386,GSE310386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0005267,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295072,,,train,sda-all,samples/GSE310386/GSM9295072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295073,heart,disease,heart disorder,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,17540,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,GSE310386,GSE310386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0005267,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295073,,,train,sda-all,samples/GSE310386/GSM9295073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295074,heart,disease,heart disorder,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,22076,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,GSE310386,GSE310386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0005267,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,zero_count_observations,VERIFIED,PASS,,,,,GSM9295074,,,train,sda-all,samples/GSE310386/GSM9295074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295075,heart,not stated,,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,4941,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,GSE310386,GSE310386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999828508711758,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9295075,,,train,sda-all,samples/GSE310386/GSM9295075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9295076,heart,disease,,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,25198,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,GSE310386,GSE310386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295076,,,train,sda-all,samples/GSE310386/GSM9295076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295077,heart,disease,cardiovascular disorder,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,17824,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,GSE310386,GSE310386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0004995,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295077,,,train,sda-all,samples/GSE310386/GSM9295077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295078,heart,disease,heart disorder,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,8945,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,GSE310386,GSE310386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0005267,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295078,,,train,sda-all,samples/GSE310386/GSM9295078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9295079,heart,disease,heart disorder,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,26990,Oral bacterial dysbiosis drives autoimmune heart disease via molecular mimicry,GSE310386,GSE310386,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0005267,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,WITHHELD,VERIFIED,VERIFIED,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9295079,,,train,sda-all,samples/GSE310386/GSM9295079,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9295276,liver,normal,,liver,primary tissue,Mus musculus,house mouse,neonatal or infant,male,Xenium,Xenium,True,fluorescence: DAPI,194740,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sbr,luna,neonatal or infant,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.499984952223309,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295276,,,train,sda-all,samples/GSE310392/GSM9295276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9295277,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,139935,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sham,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.49999896608767574,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295277,,,train,sda-all,samples/GSE310392/GSM9295277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM9295278,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,188213,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sbr,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.4999896562100354,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295278,,,train,sda-all,samples/GSE310392/GSM9295278,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9295279,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,93791,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sbr,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.49997807017543855,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295279,,,train,sda-all,samples/GSE310392/GSM9295279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9295280,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,173043,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sham,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.4999821428571428,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295280,,,train,sda-all,samples/GSE310392/GSM9295280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9295281,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,128030,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sbr,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.5000077634393761,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295281,,,train,sda-all,samples/GSE310392/GSM9295281,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM9295282,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,203086,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sbr,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.49998885279317146,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295282,,,train,sda-all,samples/GSE310392/GSM9295282,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9295283,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,225989,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sham,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.5000063690210814,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295283,,,train,sda-all,samples/GSE310392/GSM9295283,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9295284,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,237982,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sham,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.49999223816751764,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295284,,,train,sda-all,samples/GSE310392/GSM9295284,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9295285,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,83621,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sbr,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.49998798076923084,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295285,,,train,sda-all,samples/GSE310392/GSM9295285,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9295286,liver,disease,cancer,liver,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,85999,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0004992,luna,,sbr,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.499979353773098,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295286,,,train,sda-all,samples/GSE310392/GSM9295286,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9295287,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,166376,Cellular senescence in human liver under normal aging and cancer [Xenium],GSE310392,GSE310392,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,sham,luna,adult,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13590,counts,um,1.0,verified,0.5000137892995036,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41576948,,GSM9295287,,,train,sda-all,samples/GSE310392/GSM9295287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9301207,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,63442,Single-cell Spatial Transcriptomics Reveals Hepatocyte Metabolic Reprogramming in Fontan Associated Liver Disease,GSE310443,GSE310443,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,6175,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41734025,,GSM9301207,,,train,sda-all,samples/GSE310443/GSM9301207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9301208,liver,disease,Fontan-associated liver disease,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,291840,Single-cell Spatial Transcriptomics Reveals Hepatocyte Metabolic Reprogramming in Fontan Associated Liver Disease,GSE310443,GSE310443,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,MONDO:0979326,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,6175,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41734025,,GSM9301208,,,train,sda-all,samples/GSE310443/GSM9301208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9304326,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,male,Xenium,Xenium,True,fluorescence: DAPI,87360,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,whole embryo section,,luna,,WT mouse,age rule: embryonic day,embryonic,E12.5,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998709477596526,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304326,,,val,sda-all,samples/GSE310599/GSM9304326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9304327,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,male,Xenium,Xenium,True,fluorescence: DAPI,83239,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,whole embryo section,,luna,,WT mouse,age rule: embryonic day,embryonic,E12.5,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000025815778604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304327,,,val,sda-all,samples/GSE310599/GSM9304327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304328,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,female,Xenium,Xenium,True,fluorescence: DAPI,77076,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,whole embryo section,,luna,,WT mouse,age rule: embryonic day,embryonic,E12.5,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000088422541853,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304328,,,val,sda-all,samples/GSE310599/GSM9304328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304329,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,female,Xenium,Xenium,True,fluorescence: DAPI,85639,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,whole embryo section,,luna,,WT mouse,age rule: embryonic day,embryonic,E12.5,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999837892006602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304329,,,val,sda-all,samples/GSE310599/GSM9304329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304330,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,Xenium,Xenium,True,fluorescence: DAPI,111702,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: embryonic day,embryonic,E15.5,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499993830207305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304330,,,val,sda-all,samples/GSE310599/GSM9304330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9304331,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,Xenium,Xenium,True,fluorescence: DAPI,104906,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: embryonic day,embryonic,E15.5,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999712028961659,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304331,,,val,sda-all,samples/GSE310599/GSM9304331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",,
GSM9304332,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,Xenium,Xenium,True,fluorescence: DAPI,124103,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: embryonic day,embryonic,E15.5,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000309363398872,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304332,,,val,sda-all,samples/GSE310599/GSM9304332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9304333,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,Xenium,Xenium,True,fluorescence: DAPI,123862,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: embryonic day,embryonic,E15.5,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896935550365,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304333,,,val,sda-all,samples/GSE310599/GSM9304333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM9304334,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,Xenium,Xenium,True,fluorescence: DAPI,83051,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: embryonic day,embryonic,E18.5,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000124120810923,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304334,,,val,sda-all,samples/GSE310599/GSM9304334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.86}",,
GSM9304335,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,male,Xenium,Xenium,True,fluorescence: DAPI,123258,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: embryonic day,embryonic,E18.5,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500017686593562,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304335,,,val,sda-all,samples/GSE310599/GSM9304335,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.89}",,
GSM9304336,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,Xenium,Xenium,True,fluorescence: DAPI,115479,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: embryonic day,embryonic,E18.5,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499984952223309,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304336,,,val,sda-all,samples/GSE310599/GSM9304336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9304337,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,female,Xenium,Xenium,True,fluorescence: DAPI,111474,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: embryonic day,embryonic,E18.5,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998392725936813,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304337,,,val,sda-all,samples/GSE310599/GSM9304337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.77}",,
GSM9304338,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,male,Xenium,Xenium,True,fluorescence: DAPI,123209,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: postnatal day,neonatal or infant,P1,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000091827364554,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304338,,,val,sda-all,samples/GSE310599/GSM9304338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9304339,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,male,Xenium,Xenium,True,fluorescence: DAPI,118278,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: postnatal day,neonatal or infant,P1,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000154830718414,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304339,,,val,sda-all,samples/GSE310599/GSM9304339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9304340,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,female,Xenium,Xenium,True,fluorescence: DAPI,115109,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: postnatal day,neonatal or infant,P1,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000235682300259,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304340,,,val,sda-all,samples/GSE310599/GSM9304340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9304341,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,female,Xenium,Xenium,True,fluorescence: DAPI,107596,Spatiotemporal development of deep excitatory neuronal types within the mouse neocortex,GSE310599,GSE310599,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,whole-brain section,,luna,,WT mouse,age rule: postnatal day,neonatal or infant,P1,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9304341,,,val,sda-all,samples/GSE310599/GSM9304341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304473,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,838,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,No Lung Disease,luna,fetal,13 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9904344223381107,platform_constant,3.9904344223381107,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304473,,,train,hesrt,samples/GSE310610/GSM9304473,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304474,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,3792,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,No Lung Disease,luna,fetal,13 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304474,,,train,hesrt,samples/GSE310610/GSM9304474,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9304475,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,3271,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,No Lung Disease,luna,fetal,15 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304475,,,train,hesrt,samples/GSE310610/GSM9304475,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304476,lung,disease,trisomy 21,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,4411,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0700126,luna,Trisomy 21,Trisomy 21,luna,fetal,16 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304476,,,train,hesrt,samples/GSE310610/GSM9304476,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304477,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,3190,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,No Lung Disease,luna,fetal,16 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304477,,,train,hesrt,samples/GSE310610/GSM9304477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304478,lung,disease,trisomy 21,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,4198,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0700126,luna,Trisomy 21,Trisomy 21,luna,fetal,16 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304478,,,train,hesrt,samples/GSE310610/GSM9304478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304479,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,4251,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,No Lung Disease,luna,fetal,17 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.134491152973616,platform_constant,4.134491152973616,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304479,,,train,hesrt,samples/GSE310610/GSM9304479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9304480,lung,disease,trisomy 21,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,4146,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0700126,luna,Trisomy 21,Trisomy 21,luna,fetal,17 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304480,,,train,hesrt,samples/GSE310610/GSM9304480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304481,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,3130,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,No Lung Disease,luna,fetal,18 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304481,,,train,hesrt,samples/GSE310610/GSM9304481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304482,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,3251,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,No Lung Disease,luna,fetal,18 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304482,,,train,hesrt,samples/GSE310610/GSM9304482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304483,lung,disease,trisomy 21,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,4558,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0700126,luna,Trisomy 21,Trisomy 21,luna,fetal,19 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9133024009741617,platform_constant,3.9133024009741617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304483,,,train,hesrt,samples/GSE310610/GSM9304483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9304484,lung,normal,,lung,primary tissue,Homo sapiens,human,fetal,unknown,Visium,Visium,True,H&E,4399,Spatial Transcriptomics of Human Fetal Lungs,GSE310610,GSE310610,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,No Lung Disease,luna,fetal,20 weeks,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.0,platform_constant,4.0,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41484334,,GSM9304484,,,train,hesrt,samples/GSE310610/GSM9304484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9305563,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,15908,Xenium In Situ analysis of mouse skin mock-treated or treated with SspA and HDM,GSE310658,GSE310658,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000014,Whole dorsal skin,,luna,,Mock (epicutaneous PBS),luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,501,counts,um,1.0,verified,0.5000120230843219,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9305563,,,train,sda-all,samples/GSE310658/GSM9305563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9305564,skin,perturbation,,skin of body,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,46097,Xenium In Situ analysis of mouse skin mock-treated or treated with SspA and HDM,GSE310658,GSE310658,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002097,Whole dorsal skin,,luna,,Epicutaneous SspA+HDM,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,539,counts,um,1.0,verified,0.49998883263847527,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9305564,,,train,sda-all,samples/GSE310658/GSM9305564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9309230,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1171,Single cell and Spatial RNA-seq in Oral Squamous Cell Carcinoma with Different Stage,GSE310797,GSE310797,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000167,OSCC tumor,MONDO:0004958,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41851114,,GSM9309230,,,train,sda-all,samples/GSE310797/GSM9309230,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9309231,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2338,Single cell and Spatial RNA-seq in Oral Squamous Cell Carcinoma with Different Stage,GSE310797,GSE310797,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000167,OSCC tumor,MONDO:0004958,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41851114,,GSM9309231,,,train,sda-all,samples/GSE310797/GSM9309231,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9309232,oral cavity,disease,oral cavity squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1990,Single cell and Spatial RNA-seq in Oral Squamous Cell Carcinoma with Different Stage,GSE310797,GSE310797,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000167,OSCC tumor,MONDO:0004958,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,18085,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41851114,,GSM9309232,,,train,sda-all,samples/GSE310797/GSM9309232,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9312233,skeletal muscle,normal,,quadriceps femoris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2448,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,GSE310921,GSE310921,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001377,Quadriceps Muscle,,luna,,Immediate Freeze (CTR),luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.929347132038517,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312233,,,train,sda-all,samples/GSE310921/GSM9312233,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9312234,skeletal muscle,normal,,quadriceps femoris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2818,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,GSE310921,GSE310921,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001377,Quadriceps Muscle,,luna,,Immediate Freeze (CTR),luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.00696585313117,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312234,,,train,sda-all,samples/GSE310921/GSM9312234,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9312235,skeletal muscle,perturbation,,quadriceps femoris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2718,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,GSE310921,GSE310921,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001377,Quadriceps Muscle,,luna,,Transplant Solution 24hr,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9799359186422136,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312235,,,train,sda-all,samples/GSE310921/GSM9312235,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.92, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9312236,skeletal muscle,perturbation,,quadriceps femoris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2736,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,GSE310921,GSE310921,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001377,Quadriceps Muscle,,luna,,Transplant Solution 24hr,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9836025352406006,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312236,,,train,sda-all,samples/GSE310921/GSM9312236,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.49, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9312237,skeletal muscle,perturbation,,quadriceps femoris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2745,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,GSE310921,GSE310921,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001377,Quadriceps Muscle,,luna,,Postmortem 48hr,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9298291455372714,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312237,,,train,sda-all,samples/GSE310921/GSM9312237,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.61, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9312238,skeletal muscle,perturbation,,quadriceps femoris,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2684,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,GSE310921,GSE310921,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001377,Quadriceps Muscle,,luna,,Postmortem 48hr,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.971653797229367,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312238,,,train,sda-all,samples/GSE310921/GSM9312238,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.8300000000000001, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9312239,skeletal muscle,perturbation,,pectoralis major,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2168,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,GSE310921,GSE310921,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002381,Pectoralis Major,,luna,,Transplant Solution 24hr,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.179825593540337,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312239,,,train,sda-all,samples/GSE310921/GSM9312239,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9312240,skeletal muscle,perturbation,,pectoralis major,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1939,Use of Organ Transplant Solution to Preserve Skeletal Muscle for Cellular and Spatial Transcriptomic Analyses,GSE310921,GSE310921,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002381,Pectoralis Major,,luna,,Transplant Solution 24hr,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.218754565904826,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9312240,,,train,sda-all,samples/GSE310921/GSM9312240,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9317397,bone,disease,bone giant cell tumor;giant cell tumor,femur,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,False,,4992,Spatial analysis revealed localization of osteblastogenesis-inhibitory factors in Giant Cell Tumor of Bone,GSE311123,GSE311123,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000981,Distal femur,MONDO:0005674;MONDO:0002171,luna,Giant Cell Tumor of Bone,surgical curettage,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,8.883456876836373,platform_constant,,WITHHELD,,,image_review_fail,,human_visual_review,FAIL,图像与细胞/spot 错位,Image registration screen 2026-11-11: the author judged on the review page that the spots do not match the tissue. The image was removed on 2026-11-11. Expression values and coordinates equal the GEO deposit.,41872383,,GSM9317397,,,val,hesrt,samples/GSE311123/GSM9317397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9320917,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,6275,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,GSE311199,GSE311199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,48440,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42641604,,GSM9320917,,,train,sda-all,samples/GSE311199/GSM9320917,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9320919,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,6199,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,GSE311199,GSE311199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Mouse brain,,luna,,,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,48440,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42641604,,GSM9320919,,,train,sda-all,samples/GSE311199/GSM9320919,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9320921,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,32799,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,GSE311199,GSE311199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Mouse embryo,,luna,,,luna,embryonic,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,48440,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42641604,,GSM9320921,,,train,sda-all,samples/GSE311199/GSM9320921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9320923,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,6268,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,GSE311199,GSE311199,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Human melanoma,MONDO:0005105,luna,,,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,62700,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42641604,,GSM9320923,,,train,sda-all,samples/GSE311199/GSM9320923,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9738330,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,6381,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,GSE311199,GSE311199,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Human melanoma,MONDO:0005105,luna,,tissue,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,62700,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42641604,,GSM9738330,,,train,sda-all,samples/GSE311199/GSM9738330,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9738332,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,17278,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,GSE311199,GSE311199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Mouse embryo,,luna,,tissue,luna,embryonic,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,48440,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42641604,,GSM9738332,,,train,sda-all,samples/GSE311199/GSM9738332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9738334,embryo (whole),normal,,embryo,primary tissue,Mus musculus,house mouse,embryonic,unknown,DBiT-seq,DBiT-seq,False,,14784,Integrative spatial profiling of 3D genome organization and gene expression in complex tissue,GSE311199,GSE311199,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Mouse embryo,,luna,,tissue,luna,embryonic,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,48440,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42641604,,GSM9738334,,,train,sda-all,samples/GSE311199/GSM9738334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9322957,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3742,Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer,GSE311294,GSE311294,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,primary colorectal cancer,MONDO:0005575,luna,colorectal cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.0061248594673,platform_constant,7.0061248594673,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9322957,,,train,hesrt,samples/GSE311294/GSM9322957,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9322958,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4732,Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer,GSE311294,GSE311294,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,primary colorectal cancer,MONDO:0005575,luna,colorectal cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,6.953015733910887,platform_constant,6.953015733910887,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9322958,,,train,hesrt,samples/GSE311294/GSM9322958,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9322959,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3673,Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer,GSE311294,GSE311294,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,primary colorectal cancer,MONDO:0005575,luna,colorectal cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,12.641669245169885,platform_constant,12.641669245169885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9322959,,,train,hesrt,samples/GSE311294/GSM9322959,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9322960,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4362,Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer,GSE311294,GSE311294,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,primary colorectal cancer,MONDO:0005575,luna,colorectal cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,12.792072743730861,platform_constant,12.792072743730861,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,,,GSM9322960,,,train,hesrt,samples/GSE311294/GSM9322960,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9322961,colon,disease,colorectal cancer,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4564,Collagen Alignment and Spatial Transcriptomics Analysis (CASTA) reveals gene programs associated with collagen alignmet in colorectal cancer,GSE311294,GSE311294,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,primary colorectal cancer,MONDO:0005575,luna,colorectal cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,12.698463345892323,platform_constant,12.698463345892323,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9322961,,,train,hesrt,samples/GSE311294/GSM9322961,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9324190,eye,normal,,retina,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,14886,A Complete Spatial Map of Mouse Retinal Ganglion Cells Reveals Density and Gene Expression Specializations [RGC_CrossSection],GSE311369,GSE311369,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000966,retina,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5027,unknown,um,1.0,verified,0.5000103576854025,VERIFIED,FAILED,FAILED,,,VERIFIED,PASS,,,41452983,,GSM9324190,,,train,sda-all,samples/GSE311369/GSM9324190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9324328,liver,normal,,liver,primary tissue,Homo sapiens,human,adult,male,Visium HD,Visium HD,True,H&E-like (heuristic),640313,High-resolution spatial transcriptomics of human liver with VisiumHD,GSE311383,GSE311383,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver Caudate,,luna,,,age rule: bare number read as years,adult,51,extracted field,Male,,,FFPE,Formalin-fixed paraffin-embedded,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.4739122790263584,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42342734,,GSM9324328,,,train,sda-all,samples/GSE311383/GSM9324328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.73, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9324329,liver,normal,,liver,primary tissue,Homo sapiens,human,adult,female,Visium HD,Visium HD,True,H&E-like (heuristic),466284,High-resolution spatial transcriptomics of human liver with VisiumHD,GSE311383,GSE311383,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver Caudate,,luna,,,age rule: bare number read as years,adult,47,extracted field,Female,,,FFPE,Formalin-fixed paraffin-embedded,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.7851266739931295,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42342734,,GSM9324329,,,train,sda-all,samples/GSE311383/GSM9324329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.77, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9324330,liver,normal,,right lobe of liver,primary tissue,Homo sapiens,human,juvenile,male,Visium HD,Visium HD,True,H&E-like (heuristic),452402,High-resolution spatial transcriptomics of human liver with VisiumHD,GSE311383,GSE311383,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001114,Liver Right Lobe,,luna,,,luna,juvenile,15-19,extracted field,Male,,,FFPE,Formalin-fixed paraffin-embedded,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,4.622251882262378,VERIFIED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,PASS,,,42342734,,GSM9324330,,,train,sda-all,samples/GSE311383/GSM9324330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9509134,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,67705,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,Adenocarcinoma with mixed subtypes,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,6684,counts,um,1.0,verified,0.5000265330188679,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509134,,,val,sda-all,samples/GSE311609/GSM9509134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509135,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,219228,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,"Adenocarcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,6446,counts,um,1.0,verified,0.49999417249417244,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509135,,,val,sda-all,samples/GSE311609/GSM9509135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509136,lung,disease,acinar cell carcinoma;non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,64883,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0004965;MONDO:0005233,luna,Acinar cell carcinoma,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,5606,counts,um,1.0,verified,0.500017686593562,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509136,,,val,sda-all,samples/GSE311609/GSM9509136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509137,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,64819,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233,luna,"Sq. cell carcinoma, keratinizing, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,6210,counts,um,1.0,verified,0.5000045934772622,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509137,,,val,sda-all,samples/GSE311609/GSM9509137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509138,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,36829,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,"Adenocarcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,5335,counts,um,1.0,verified,0.4999862372694742,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509138,,,val,sda-all,samples/GSE311609/GSM9509138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509139,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,78736,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233,luna,"Sq. cell carcinoma, keratinizing, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,5584,counts,um,1.0,verified,0.5000022954733266,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509139,,,val,sda-all,samples/GSE311609/GSM9509139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509140,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,71776,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,Adenocarcinoma with mixed subtypes,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,538,counts,um,1.0,verified,0.5000180747779385,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509140,,,val,sda-all,samples/GSE311609/GSM9509140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509141,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55176,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,Adenocarcinoma with mixed subtypes,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,535,counts,um,1.0,verified,0.4999883816998864,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509141,,,val,sda-all,samples/GSE311609/GSM9509141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509142,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,37298,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,Adenocarcinoma with mixed subtypes,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,526,counts,um,1.0,verified,0.5000012903891814,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509142,,,val,sda-all,samples/GSE311609/GSM9509142,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509143,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,247597,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,"Adenocarcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000011510128913,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509143,,,val,sda-all,samples/GSE311609/GSM9509143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509144,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,841970,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233,luna,"Sq. cell carcinoma, keratinizing, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896330085009,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509144,,,val,sda-all,samples/GSE311609/GSM9509144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509145,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,73037,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,Adenocarcinoma with mixed subtypes,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,529,counts,um,1.0,verified,0.499979353773098,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509145,,,val,sda-all,samples/GSE311609/GSM9509145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9509146,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,81488,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233,luna,"Sq. cell carcinoma, keratinizing, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,516,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509146,,,val,sda-all,samples/GSE311609/GSM9509146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509147,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,49489,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,Adenocarcinoma with mixed subtypes,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,470,counts,um,1.0,verified,0.4999767465894998,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509147,,,val,sda-all,samples/GSE311609/GSM9509147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509148,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,52832,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,Adenocarcinoma with mixed subtypes,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,487,counts,um,1.0,verified,0.4999819233550252,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509148,,,val,sda-all,samples/GSE311609/GSM9509148,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509149,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,189865,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,"Adenocarcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,528,counts,um,1.0,verified,0.5000063334868724,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509149,,,val,sda-all,samples/GSE311609/GSM9509149,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509150,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,677474,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233,luna,"Sq. cell carcinoma, keratinizing, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999875862068965,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509150,,,val,sda-all,samples/GSE311609/GSM9509150,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509151,lung,disease,acinar cell carcinoma;non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,50050,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0004965;MONDO:0005233,luna,Acinar cell carcinoma,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,520,counts,um,1.0,verified,0.4999985269856233,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509151,,,val,sda-all,samples/GSE311609/GSM9509151,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509152,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,57588,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233,luna,"Sq. cell carcinoma, keratinizing, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,535,counts,um,1.0,verified,0.4999985269856233,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509152,,,val,sda-all,samples/GSE311609/GSM9509152,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9509153,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,43887,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,"Adenocarcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,511,counts,um,1.0,verified,0.49999354872006607,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509153,,,val,sda-all,samples/GSE311609/GSM9509153,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509154,lung,disease,non-small cell lung carcinoma;adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16837,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233;MONDO:0004970,luna,"Adenocarcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,442,counts,um,1.0,verified,0.5000112849834486,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509154,,,val,sda-all,samples/GSE311609/GSM9509154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509155,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,63674,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,primary NSCLC,MONDO:0005233,luna,"Sq. cell carcinoma, keratinizing, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,528,counts,um,1.0,verified,0.5000172239573765,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509155,,,val,sda-all,samples/GSE311609/GSM9509155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509156,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,69009,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Infiltrating duct carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,498,counts,um,1.0,verified,0.5000112849834486,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509156,,,val,sda-all,samples/GSE311609/GSM9509156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509157,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16589,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Infiltrating duct carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,446,counts,um,1.0,verified,0.4999941023826374,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509157,,,val,sda-all,samples/GSE311609/GSM9509157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509158,breast,disease,breast lobular carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38023,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0000552,luna,"Lobular carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,457,counts,um,1.0,verified,0.5000077407369181,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509158,,,val,sda-all,samples/GSE311609/GSM9509158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509159,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,77463,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,Infiltr. duct mixed with other types of carcinoma,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,532,counts,um,1.0,verified,0.49999529792356306,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509159,,,val,sda-all,samples/GSE311609/GSM9509159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9509160,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,145946,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Infiltrating duct carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,525,counts,um,1.0,verified,0.500011932035128,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509160,,,val,sda-all,samples/GSE311609/GSM9509160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509161,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,45496,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Infiltrating duct carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,456,counts,um,1.0,verified,0.5000134308620546,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509161,,,val,sda-all,samples/GSE311609/GSM9509161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509162,breast,disease,breast cancer;apocrine adenocarcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,153365,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0003214,luna,Apocrine adenocarcinoma,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,536,counts,um,1.0,verified,0.5000051741470048,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509162,,,val,sda-all,samples/GSE311609/GSM9509162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509163,breast,disease,breast cancer;adenocarcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,96145,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004970,luna,"Adenocarcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,521,counts,um,1.0,verified,0.5000113749172733,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509163,,,val,sda-all,samples/GSE311609/GSM9509163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509164,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,66381,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,529,counts,um,1.0,verified,0.5000077407369181,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509164,,,val,sda-all,samples/GSE311609/GSM9509164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9509165,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38496,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Infiltrating duct carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,525,counts,um,1.0,verified,0.50001036116045,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509165,,,val,sda-all,samples/GSE311609/GSM9509165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9509166,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,98420,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Infiltrating duct carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,536,counts,um,1.0,verified,0.5000137892995036,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509166,,,val,sda-all,samples/GSE311609/GSM9509166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9509167,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,48542,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,514,counts,um,1.0,verified,0.49996508379888277,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509167,,,val,sda-all,samples/GSE311609/GSM9509167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9509168,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,52999,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,517,counts,um,1.0,verified,0.5000103422339225,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509168,,,val,sda-all,samples/GSE311609/GSM9509168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9509169,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,96077,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,514,counts,um,1.0,verified,0.5000068913238233,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509169,,,val,sda-all,samples/GSE311609/GSM9509169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9509170,breast,disease,breast cancer,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,135290,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,529,counts,um,1.0,verified,0.5000068913238233,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509170,,,val,sda-all,samples/GSE311609/GSM9509170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9509171,breast,disease,breast cancer;carcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,187556,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0004993,luna,"Carcinoma, NOS",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999965507726269,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509171,,,val,sda-all,samples/GSE311609/GSM9509171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509172,breast,disease,breast cancer;apocrine adenocarcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,124706,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0003214,luna,Apocrine adenocarcinoma,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,540,counts,um,1.0,verified,0.4999933463449254,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509172,,,val,sda-all,samples/GSE311609/GSM9509172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509173,breast,disease,breast cancer;apocrine adenocarcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,141615,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0003214,luna,Apocrine adenocarcinoma,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,532,counts,um,1.0,verified,0.5000103483410813,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509173,,,val,sda-all,samples/GSE311609/GSM9509173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9509174,breast,disease,breast cancer;apocrine adenocarcinoma,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,108277,Single-Cell Spatial Transcriptomics of Archival Human Lung and Breast Tumor FFPE Samples,GSE311609,GSE311609,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000310,primary breast cancer,MONDO:0007254;MONDO:0003214,luna,Apocrine adenocarcinoma,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,535,counts,um,1.0,verified,0.5000172508970466,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42062553,,GSM9509174,,,val,sda-all,samples/GSE311609/GSM9509174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9328544,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,13445,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse [cosMx],GSE311636,GSE311636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,rectum,MONDO:0005101,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9328544,,,val,sda-all,samples/GSE311636/GSM9328544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9328545,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,27120,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse [cosMx],GSE311636,GSE311636,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,rectum,MONDO:0005101,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9328545,,,val,sda-all,samples/GSE311636/GSM9328545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9329349,liver,disease,cholangitis,liver,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,H&E,100627,An immunobiliary single-cell atlas resolves crosstalk between type 2 conventional dendritic cells and γδ T cells in cholangitis,GSE311681,GSE311681,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,MONDO:0004789,luna,,DDC diet for 5 days,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,10x Genomics Xenium In Situ,,,cell,541,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41963321,,GSM9329349,,,train,hesrt,samples/GSE311681/GSM9329349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9330221,kidney,disease,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,696,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,aCD154 (C10),luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.076039130546137,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330221,,,train,sda-all,samples/GSE311717/GSM9330221,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9330222,kidney,disease,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,327,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,aCD154 (C10),luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,3.978701947452763,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330222,,,train,sda-all,samples/GSE311717/GSM9330222,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9330223,kidney,perturbation,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,302,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,aCD154 (C10),luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.109334146537467,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330223,,,train,sda-all,samples/GSE311717/GSM9330223,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.27, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9330224,kidney,perturbation,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,391,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,aCD154 (C10),luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.122726622962377,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330224,,,train,sda-all,samples/GSE311717/GSM9330224,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.72, ""disease_status"": 0.27, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9330225,kidney,perturbation,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,187,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,aCD154 (C10)+ Abatacept,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.328234848540216,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330225,,,train,sda-all,samples/GSE311717/GSM9330225,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9330226,kidney,perturbation,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,349,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,aCD154 (C10)+ Abatacept,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.500168523065462,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330226,,,train,sda-all,samples/GSE311717/GSM9330226,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.28, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9330227,kidney,disease,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,421,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,aCD154 (C10)+ Abatacept,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.340985474479342,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330227,,,train,sda-all,samples/GSE311717/GSM9330227,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.32, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9330228,kidney,disease,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,219,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,aCD154 (C10)+ Abatacept,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.355436691476438,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330228,,,train,sda-all,samples/GSE311717/GSM9330228,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.52, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9330229,kidney,perturbation,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,226,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,CD154  (PG405) +MD3,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.3601009533662065,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330229,,,train,sda-all,samples/GSE311717/GSM9330229,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9330230,kidney,disease,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,111,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,CD154  (PG405) +MD3,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.257821642750977,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330230,,,train,sda-all,samples/GSE311717/GSM9330230,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.39, ""uberon"": 0.96, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9330231,kidney,perturbation,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,92,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,CD154 (PG405)+ MD3,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.357722481798944,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330231,,,train,sda-all,samples/GSE311717/GSM9330231,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.74, ""disease_status"": 0.4, ""uberon"": 0.96, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9330232,kidney,disease,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,409,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,CD154 (PG405)+ MD3,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.198147221358142,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330232,,,train,sda-all,samples/GSE311717/GSM9330232,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.75, ""disease_status"": 0.44, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9330233,kidney,perturbation,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,344,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,CD154 (PG405)+ MD3,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.03986183069716,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330233,,,train,sda-all,samples/GSE311717/GSM9330233,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM9330234,kidney,disease,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,519,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,CD154 (PG405) + Abatacept + Tocilizumab,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.04184106768196,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330234,,,train,sda-all,samples/GSE311717/GSM9330234,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 0.78, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9330235,kidney,perturbation,,kidney,xenograft,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium,Visium,True,H&E,563,Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis via APOE-SDC2 Signaling,GSE311717,GSE311717,9541,Macaca fascicularis;Sus scrofa,9541;9823,,False,True,GEO organism field,"Macaca fascicularis
Sus scrofa",,luna,UBERON:0002113,kidney,,luna,,aCD154 (5C8) + Abatacept + Tocilizumab,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,visium,,,spot,74220,counts,um,1.0,verified,4.022573615282892,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9330235,,,train,sda-all,samples/GSE311717/GSM9330235,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9331952,brain,normal,,inferior olivary complex,primary tissue,Rattus norvegicus,Norway rat,adult,female,DBiT-seq,DBiT-seq,False,,988,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",GSE311781,GSE311781,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0002127,Caudal cerebellar preduncle (ccp) and Inferior Olive,,luna,,Saline injection in the caudal cerebellar peduncle (ccp),age rule: age with unit,adult,9-12 week old,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,34034,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331952,,,train,sda-all,samples/GSE311781/GSM9331952,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.31, ""life_stage"": 0.98}",disease_status;uberon,low_confidence_annotation
GSM9331953,brain,normal,,cerebellar peduncle,primary tissue,Rattus norvegicus,Norway rat,adult,female,DBiT-seq,DBiT-seq,False,,996,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",GSE311781,GSE311781,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0007416,Caudal cerebellar preduncle (ccp) and Inferior Olive,,luna,,Saline injection in the caudal cerebellar peduncle (ccp),age rule: age with unit,adult,9-12 week old,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,34034,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331953,,,train,sda-all,samples/GSE311781/GSM9331953,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.41000000000000003, ""life_stage"": 0.99}",disease_status;uberon,low_confidence_annotation
GSM9331954,brain,normal,,cerebellar peduncle,primary tissue,Rattus norvegicus,Norway rat,adult,female,DBiT-seq,DBiT-seq,False,,902,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",GSE311781,GSE311781,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0007416,Caudal cerebellar preduncle (ccp) and Inferior Olive,,luna,,Saline injection in the caudal cerebellar peduncle (ccp),age rule: age with unit,adult,9-12 week old,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,34034,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331954,,,train,sda-all,samples/GSE311781/GSM9331954,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.33, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9331955,brain,normal,,cerebellar peduncle,primary tissue,Rattus norvegicus,Norway rat,adult,female,DBiT-seq,DBiT-seq,False,,1052,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",GSE311781,GSE311781,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0007416,Caudal cerebellar preduncle (ccp) and Inferior Olive,,luna,,Saline injection in the caudal cerebellar peduncle (ccp),age rule: age with unit,adult,9-12 week old,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,34034,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331955,,,train,sda-all,samples/GSE311781/GSM9331955,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.38, ""life_stage"": 0.98}",disease_status;uberon,low_confidence_annotation
GSM9331956,brain,disease,,cerebellar peduncle,primary tissue,Rattus norvegicus,Norway rat,adult,female,DBiT-seq,DBiT-seq,False,,765,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",GSE311781,GSE311781,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0007416,Caudal cerebellar preduncle (ccp) and Inferior Olive,,luna,,lesion at caudal cerebellar peduncle (ccp),age rule: age with unit,adult,9-12 week old,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,34034,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331956,,,train,sda-all,samples/GSE311781/GSM9331956,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9331957,brain,disease,,cerebellar peduncle,primary tissue,Rattus norvegicus,Norway rat,adult,female,DBiT-seq,DBiT-seq,False,,903,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",GSE311781,GSE311781,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0007416,Caudal cerebellar preduncle (ccp) and Inferior Olive,,luna,,lesion at caudal cerebellar peduncle (ccp),age rule: age with unit,adult,9-12 week old,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,34034,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331957,,,train,sda-all,samples/GSE311781/GSM9331957,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.44, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9331958,brain,disease,,cerebellar peduncle,primary tissue,Rattus norvegicus,Norway rat,adult,female,DBiT-seq,DBiT-seq,False,,832,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",GSE311781,GSE311781,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0007416,Caudal cerebellar preduncle (ccp) and Inferior Olive,,luna,,lesion at caudal cerebellar peduncle (ccp),age rule: age with unit,adult,9-12 week old,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,34034,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331958,,,train,sda-all,samples/GSE311781/GSM9331958,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM9331961,brain,disease,,cerebellar peduncle,primary tissue,Rattus norvegicus,Norway rat,adult,female,DBiT-seq,DBiT-seq,False,,840,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",GSE311781,GSE311781,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0007416,Caudal cerebellar preduncle (ccp) and Inferior Olive,,luna,,lesion at caudal cerebellar peduncle (ccp),age rule: age with unit,adult,9-12 week old,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,34034,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331961,,,train,sda-all,samples/GSE311781/GSM9331961,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.53, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9331962,brain,disease,,cerebellar peduncle,primary tissue,Rattus norvegicus,Norway rat,adult,female,DBiT-seq,DBiT-seq,False,,865,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",GSE311781,GSE311781,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0007416,Caudal cerebellar preduncle (ccp) and Inferior Olive,,luna,,lesion at caudal cerebellar peduncle (ccp),age rule: age with unit,adult,9-12 week old,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,34034,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331962,,,train,sda-all,samples/GSE311781/GSM9331962,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9331963,brain,disease,,cerebellar peduncle,primary tissue,Rattus norvegicus,Norway rat,adult,female,DBiT-seq,DBiT-seq,False,,827,"Focal white matter lesions drive grey matter inflammation, neuronal dysfunction and synapse loss",GSE311781,GSE311781,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0007416,Caudal cerebellar preduncle (ccp) and Inferior Olive,,luna,,lesion at caudal cerebellar peduncle (ccp),age rule: age with unit,adult,9-12 week old,extracted field,Female,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,34034,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42020752,,GSM9331963,,,train,sda-all,samples/GSE311781/GSM9331963,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.5, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9331988,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,288,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],GSE311783,GSE311783+GSE311789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.0476066595333484,platform_constant,3.0476066595333484,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331988,,,train,hesrt,samples/GSE311783/GSM9331988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9331989,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1268,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],GSE311783,GSE311783+GSE311789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.0078764943144485,platform_constant,4.0078764943144485,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331989,,,train,hesrt,samples/GSE311783/GSM9331989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9331990,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,924,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],GSE311783,GSE311783+GSE311789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.009138974147024,platform_constant,4.009138974147024,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331990,,,train,hesrt,samples/GSE311783/GSM9331990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9331991,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,661,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],GSE311783,GSE311783+GSE311789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,FOLFIRINOX,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.014103003982557,platform_constant,3.014103003982557,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,41707654,,GSM9331991,,,train,hesrt,samples/GSE311783/GSM9331991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9331992,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1330,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],GSE311783,GSE311783+GSE311789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.527272746468362,platform_constant,4.527272746468362,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331992,,,train,hesrt,samples/GSE311783/GSM9331992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9331993,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1374,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],GSE311783,GSE311783+GSE311789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.508333334528059,platform_constant,4.508333334528059,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331993,,,train,hesrt,samples/GSE311783/GSM9331993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9331994,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2028,DeCAF redefines fibroblast states uncovering multidimensional tumor-stroma relationships driving clinical tumor progression and immunotherapy response [Spatial Transcriptomics],GSE311783,GSE311783+GSE311789,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Primary PDAC,MONDO:0005184,luna,pancreatic ductal adenocarcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.057952223859324,platform_constant,4.057952223859324,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41707654,,GSM9331994,,,train,hesrt,samples/GSE311783/GSM9331994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334013,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,33030,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,CR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334013,,,train,sda-all,samples/GSE311892/GSM9334013,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334017,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,23972,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334017,,,train,sda-all,samples/GSE311892/GSM9334017,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334020,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,7571,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334020,,,train,sda-all,samples/GSE311892/GSM9334020,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334022,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,23617,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334022,,,train,sda-all,samples/GSE311892/GSM9334022,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334024,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4559,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334024,,,train,sda-all,samples/GSE311892/GSM9334024,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.98, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334026,other,not stated,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2950,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334026,,,train,sda-all,samples/GSE311892/GSM9334026,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334029,other,not stated,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,7504,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334029,,,train,sda-all,samples/GSE311892/GSM9334029,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334030,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4509,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334030,,,train,sda-all,samples/GSE311892/GSM9334030,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.99, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9334032,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,11607,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334032,,,train,sda-all,samples/GSE311892/GSM9334032,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.17, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334034,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,47129,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,CR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334034,,,train,sda-all,samples/GSE311892/GSM9334034,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334035,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,9432,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334035,,,train,sda-all,samples/GSE311892/GSM9334035,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334037,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2799,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334037,,,train,sda-all,samples/GSE311892/GSM9334037,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334040,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,14035,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334040,,,train,sda-all,samples/GSE311892/GSM9334040,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334042,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4226,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,CR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334042,,,train,sda-all,samples/GSE311892/GSM9334042,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334043,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,10345,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,CR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334043,,,train,sda-all,samples/GSE311892/GSM9334043,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334045,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,6731,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334045,,,train,sda-all,samples/GSE311892/GSM9334045,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334048,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,9225,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334048,,,train,sda-all,samples/GSE311892/GSM9334048,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334049,other,not stated,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,21180,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334049,,,train,sda-all,samples/GSE311892/GSM9334049,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334051,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,7731,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,CR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334051,,,train,sda-all,samples/GSE311892/GSM9334051,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334052,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,17036,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,CR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,um,1.0,verified,,,,,,,VERIFIED,,,,41438752,,GSM9334052,,,train,sda-all,samples/GSE311892/GSM9334052,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.97, ""disease_status"": 0.15, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334053,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,6612,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334053,,,train,sda-all,samples/GSE311892/GSM9334053,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334054,other,not stated,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,5086,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334054,,,train,sda-all,samples/GSE311892/GSM9334054,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334055,other,not stated,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4402,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334055,,,train,sda-all,samples/GSE311892/GSM9334055,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334056,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,13920,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,Healthy,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334056,,,train,sda-all,samples/GSE311892/GSM9334056,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334057,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4751,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,Healthy,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334057,,,train,sda-all,samples/GSE311892/GSM9334057,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334059,other,not stated,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,5372,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334059,,,train,sda-all,samples/GSE311892/GSM9334059,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334060,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,5850,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334060,,,train,sda-all,samples/GSE311892/GSM9334060,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.97, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334061,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,8018,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,Healthy,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334061,,,train,sda-all,samples/GSE311892/GSM9334061,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334062,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,8669,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,Healthy,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334062,,,train,sda-all,samples/GSE311892/GSM9334062,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334063,other,not stated,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,6191,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334063,,,train,sda-all,samples/GSE311892/GSM9334063,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.97, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9334064,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,5105,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334064,,,train,sda-all,samples/GSE311892/GSM9334064,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334066,other,not stated,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,8291,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334066,,,train,sda-all,samples/GSE311892/GSM9334066,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334067,other,normal,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,9417,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,Healthy,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334067,,,train,sda-all,samples/GSE311892/GSM9334067,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9334068,other,not stated,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,29482,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,NR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334068,,,train,sda-all,samples/GSE311892/GSM9334068,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334069,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,7252,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,CR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334069,,,train,sda-all,samples/GSE311892/GSM9334069,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.99, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334070,other,disease,,mammalian vulva,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,17855,The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells,GSE311892,GSE311892,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000997,Vulva,,luna,,PR,luna,not stated,,not stated,,,,FFPE,formalin-fixed paraffin-embedded,release v3,imaging-based,CosMx,,,cell,960,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41438752,,GSM9334070,,,train,sda-all,samples/GSE311892/GSM9334070,sda-tissue-disease-2.3,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9334384,skin,disease,melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4619,A targetable developmental program co-regulates angiogenesis and immune evasion [Spatial Transcriptomics],GSE311909,GSE311909+GSE312368,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005105,luna,melanoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447272,platform_constant,7.284643603447272,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41631877,,GSM9334384,,,val,hesrt,samples/GSE311909/GSM9334384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9334385,skin,disease,melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4795,A targetable developmental program co-regulates angiogenesis and immune evasion [Spatial Transcriptomics],GSE311909,GSE311909+GSE312368,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005105,luna,melanoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.13194742373365,platform_constant,4.13194742373365,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41631877,,GSM9334385,,,val,hesrt,samples/GSE311909/GSM9334385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9336958,lung,perturbation,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,375327,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,GSE312053,GSE312053,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18087,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix;image_partial_coverage,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336958,,,train,hesrt,samples/GSE312053/GSM9336958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9336959,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,699160,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,GSE312053,GSE312053,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,COVID-19,COVID-19,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18087,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix;image_partial_coverage,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336959,,,train,hesrt,samples/GSE312053/GSM9336959,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9336960,lung,disease,acute respiratory distress syndrome,lung,primary tissue,Homo sapiens,human,adult,unknown,Visium HD,Visium HD,True,H&E,634825,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,GSE312053,GSE312053,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0006502,luna,acute respiratory distress syndrome,ARDS,age rule: bare number read as years,adult,33,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18087,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix;image_partial_coverage,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336960,,,train,hesrt,samples/GSE312053/GSM9336960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9336961,lung,disease,acute respiratory distress syndrome,lung,primary tissue,Homo sapiens,human,adult,unknown,Visium HD,Visium HD,True,H&E,630272,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,GSE312053,GSE312053,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0006502,luna,acute respiratory distress syndrome,ARDS,age rule: bare number read as years,adult,33,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18087,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix;image_partial_coverage,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336961,,,train,hesrt,samples/GSE312053/GSM9336961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9336962,lung,disease,acute respiratory distress syndrome,lung,primary tissue,Homo sapiens,human,adult,unknown,Visium HD,Visium HD,True,H&E,600108,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,GSE312053,GSE312053,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0006502,luna,acute respiratory distress syndrome,ARDS,age rule: bare number read as years,adult,33,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18087,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336962,,,train,hesrt,samples/GSE312053/GSM9336962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9336963,lung,disease,acute respiratory distress syndrome,lung,primary tissue,Homo sapiens,human,adult,unknown,Visium HD,Visium HD,True,H&E,655840,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,GSE312053,GSE312053,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0006502,luna,acute respiratory distress syndrome,ARDS,age rule: bare number read as years,adult,33,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18087,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336963,,,train,hesrt,samples/GSE312053/GSM9336963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9336964,lung,disease,acute respiratory distress syndrome,lung,primary tissue,Homo sapiens,human,adult,unknown,Visium HD,Visium HD,True,H&E,649550,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,GSE312053,GSE312053,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0006502,luna,acute respiratory distress syndrome,ARDS,age rule: bare number read as years,adult,33,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18087,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336964,,,train,hesrt,samples/GSE312053/GSM9336964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9336965,lung,disease,acute respiratory distress syndrome,lung,primary tissue,Homo sapiens,human,adult,unknown,Visium HD,Visium HD,True,H&E,696352,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,GSE312053,GSE312053,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0006502,luna,acute respiratory distress syndrome,ARDS,age rule: bare number read as years,adult,33,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18087,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336965,,,train,hesrt,samples/GSE312053/GSM9336965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9336966,lung,disease,acute respiratory distress syndrome,lung,primary tissue,Homo sapiens,human,adult,unknown,Visium HD,Visium HD,True,H&E,657601,Bridge to transplant using a flow-adaptive extracorporeal total artificial lung system following bilateral pneumonectomy,GSE312053,GSE312053,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0006502,luna,acute respiratory distress syndrome,ARDS,age rule: bare number read as years,adult,33,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18087,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,summary_features_in_matrix,summary_features_in_matrix,human_visual_review,,,,41619723,,GSM9336966,,,train,hesrt,samples/GSE312053/GSM9336966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9338171,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1082,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312129,GSE312129,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Whole skin,MONDO:0005100,luna,systemic sclerosis,,luna,not stated,,not stated,,GSE312129:SSc1,SSc1,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.524676684126069,platform_constant,4.524676684126069,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338171,,,train,hesrt,samples/GSE312129/GSM9338171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338172,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1016,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312129,GSE312129,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Whole skin,MONDO:0005100,luna,systemic sclerosis,,luna,not stated,,not stated,,GSE312129:SSc2,SSc2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,3.7725347806420624,platform_constant,3.7725347806420624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338172,,,train,hesrt,samples/GSE312129/GSM9338172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338173,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,581,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312129,GSE312129,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Whole skin,MONDO:0005100,luna,systemic sclerosis,,luna,not stated,,not stated,,GSE312129:SSc3,SSc3,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,5.669671451015597,platform_constant,5.669671451015597,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338173,,,train,hesrt,samples/GSE312129/GSM9338173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338174,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,628,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312129,GSE312129,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Whole skin,MONDO:0005100,luna,systemic sclerosis,,luna,not stated,,not stated,,GSE312129:SSc4,SSc4,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,1.9460507194363599,platform_constant,1.9460507194363599,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338174,,,train,hesrt,samples/GSE312129/GSM9338174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338175,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1228,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312129,GSE312129,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Whole skin,MONDO:0005100,luna,systemic sclerosis,,luna,not stated,,not stated,,GSE312129:SSc5,SSc5,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,5.7847743574767785,platform_constant,5.7847743574767785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338175,,,train,hesrt,samples/GSE312129/GSM9338175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338176,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,931,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312129,GSE312129,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Whole skin,MONDO:0005100,luna,systemic sclerosis,,luna,not stated,,not stated,,GSE312129:SSc6,SSc6,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,2.4761107424653304,platform_constant,2.4761107424653304,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338176,,,train,hesrt,samples/GSE312129/GSM9338176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338177,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1294,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312129,GSE312129,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Whole skin,MONDO:0005100,luna,systemic sclerosis,,luna,not stated,,not stated,,GSE312129:SSc7,SSc7,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,4.078824596312873,platform_constant,4.078824596312873,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338177,,,train,hesrt,samples/GSE312129/GSM9338177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338178,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,783,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312129,GSE312129,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Whole skin,MONDO:0005100,luna,systemic sclerosis,,luna,not stated,,not stated,,GSE312129:SSc8,SSc8,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,2.012532061730178,platform_constant,2.012532061730178,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338178,,,train,hesrt,samples/GSE312129/GSM9338178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338179,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1850,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312129,GSE312129,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Whole skin,MONDO:0005100,luna,systemic sclerosis,,luna,not stated,,not stated,,GSE312129:SSc9,SSc9,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,3.269655478689401,platform_constant,3.269655478689401,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338179,,,train,hesrt,samples/GSE312129/GSM9338179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9338180,skin,disease,systemic sclerosis,skin of body,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,824,"Single-nuclei multiome and spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312129,GSE312129,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Whole skin,MONDO:0005100,luna,systemic sclerosis,,luna,not stated,,not stated,,GSE312129:SSc10,SSc10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,37082,counts,pixel,2.2622230695498575,platform_constant,2.2622230695498575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41411065,,GSM9338180,,,train,hesrt,samples/GSE312129/GSM9338180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9339560,lung,perturbation,,lung,primary tissue,Rattus norvegicus,Norway rat,not stated,male,Visium,Visium,True,H&E,4057,Spatially resolved integrative analysis of transcriptomic and metabolomic changes in tissue injury studies,GSE312168,GSE312168,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002048,lung,,luna,,AZX,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,25199,counts,pixel,4.0878575179149745,platform_constant,4.0878575179149745,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41501078,,GSM9339560,,,train,hesrt,samples/GSE312168/GSM9339560,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340363,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,7269,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714368,platform_constant,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340363,,,test,hesrt,samples/GSE312204/GSM9340363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340364,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,11346,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447287,platform_constant,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340364,,,test,hesrt,samples/GSE312204/GSM9340364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340365,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,9022,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714368,platform_constant,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340365,,,test,hesrt,samples/GSE312204/GSM9340365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340366,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,8851,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447272,platform_constant,7.284643603447272,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340366,,,test,hesrt,samples/GSE312204/GSM9340366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340367,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,13362,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714368,platform_constant,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340367,,,test,hesrt,samples/GSE312204/GSM9340367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340368,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,7431,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340368,,,test,hesrt,samples/GSE312204/GSM9340368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340369,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,11842,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447287,platform_constant,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340369,,,test,hesrt,samples/GSE312204/GSM9340369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340370,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,9421,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340370,,,test,hesrt,samples/GSE312204/GSM9340370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340371,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,8620,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447287,platform_constant,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340371,,,test,hesrt,samples/GSE312204/GSM9340371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340372,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,11743,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340372,,,test,hesrt,samples/GSE312204/GSM9340372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340373,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,8076,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447287,platform_constant,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340373,,,test,hesrt,samples/GSE312204/GSM9340373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340374,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,9890,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447296,platform_constant,7.284643603447296,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340374,,,test,hesrt,samples/GSE312204/GSM9340374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340375,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,14336,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714368,platform_constant,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340375,,,test,hesrt,samples/GSE312204/GSM9340375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340376,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,7139,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447287,platform_constant,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340376,,,test,hesrt,samples/GSE312204/GSM9340376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340377,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,11174,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447301,platform_constant,7.284643603447301,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340377,,,test,hesrt,samples/GSE312204/GSM9340377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340378,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,10493,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.407971604473335,platform_constant,7.407971604473335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340378,,,test,hesrt,samples/GSE312204/GSM9340378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9340379,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,13643,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714368,platform_constant,7.142856785714368,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340379,,,test,hesrt,samples/GSE312204/GSM9340379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340380,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,13022,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447287,platform_constant,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340380,,,test,hesrt,samples/GSE312204/GSM9340380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340381,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,11709,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.142856785714311,platform_constant,7.142856785714311,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340381,,,test,hesrt,samples/GSE312204/GSM9340381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9340382,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,8816,Clonal biases dictate availability of colonic cancer driver mutations for transformation,GSE312204,GSE312204,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,normal colon,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,7.284643603447287,platform_constant,7.284643603447287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41991531,,GSM9340382,,,test,hesrt,samples/GSE312204/GSM9340382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9342585,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Visium,Visium,True,H&E-like (heuristic),639,MicroRNA-200 family inhibits sebaceous gland fate specification by disrupting SOX9 function [Spatial Transcriptomics],GSE312281,GSE312281,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,"Control, Induced",luna,neonatal or infant,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19059,counts,um,1.0,verified,4.490608334920138,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9342585,,,train,sda-all,samples/GSE312281/GSM9342585,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.66, ""life_stage"": 0.89}",,
GSM9343668,liver,disease,neoplasm,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E-like (heuristic),4658,Spatially-guided metabolomics profiling of heterogeneous human tumor tissues,GSE312327,GSE312327,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver,MONDO:0005070,luna,,,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.0095203801077535,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41922830,,GSM9343668,,,train,sda-all,samples/GSE312327/GSM9343668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9343669,liver,disease,neoplasm,liver,tumour tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,H&E-like (heuristic),4992,Spatially-guided metabolomics profiling of heterogeneous human tumor tissues,GSE312327,GSE312327,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver,MONDO:0005070,luna,,,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.972315974580035,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41922830,,GSM9343669,,,train,sda-all,samples/GSE312327/GSM9343669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9344297,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,735196,Multi-omics Analysis of Immune Cells Induced by Artificial Adjuvant Vector Cell (aAVC) Therapy in HPV-Positive Tumor-Bearing Mice [Spatial Transcriptomics],GSE312358,GSE312358,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,TC1 Tumor tissues,MONDO:0005070,luna,,Non Treat and aAVC treated,luna,not stated,,not stated,,,,fixed frozen,Fixed frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000006462286097,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42545372,,GSM9344297,,,train,sda-all,samples/GSE312358/GSM9344297,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9344298,other,disease,neoplasm,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1156063,Multi-omics Analysis of Immune Cells Induced by Artificial Adjuvant Vector Cell (aAVC) Therapy in HPV-Positive Tumor-Bearing Mice [Spatial Transcriptomics],GSE312358,GSE312358,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,TC1 Tumor tissues,MONDO:0005070,luna,,Non Treat and aAVC treated,luna,not stated,,not stated,,,,fixed frozen,Fixed frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999954780361757,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42545372,,GSM9344298,,,train,sda-all,samples/GSE312358/GSM9344298,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.97, ""disease_status"": 0.89, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9345400,small intestine,disease,inflammatory bowel disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,16474,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002116,Ileum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345400,,,train,sda-all,samples/GSE312415/GSM9345400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345401,small intestine,disease,intestinal disorder,ileum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,36351,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002116,Ileum,MONDO:0005020,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345401,,,train,sda-all,samples/GSE312415/GSM9345401,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345402,small intestine,disease,,ileum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,6656,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002116,Ileum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345402,,,train,sda-all,samples/GSE312415/GSM9345402,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345403,small intestine,disease,inflammatory bowel disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,19820,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002116,Ileum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345403,,,train,sda-all,samples/GSE312415/GSM9345403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345404,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,5881,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345404,,,train,sda-all,samples/GSE312415/GSM9345404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345405,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,10759,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345405,,,train,sda-all,samples/GSE312415/GSM9345405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345406,rectum,disease,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,14728,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345406,,,train,sda-all,samples/GSE312415/GSM9345406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345407,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,27170,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345407,,,train,sda-all,samples/GSE312415/GSM9345407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345408,small intestine,disease,intestinal disorder;immune system disorder,ileum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,27662,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002116,Ileum,MONDO:0005020;MONDO:0005046,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345408,,,train,sda-all,samples/GSE312415/GSM9345408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345409,small intestine,disease,inflammatory bowel disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,28855,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002116,Ileum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345409,,,train,sda-all,samples/GSE312415/GSM9345409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345410,rectum,disease,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,31017,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345410,,,train,sda-all,samples/GSE312415/GSM9345410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345411,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,60856,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345411,,,train,sda-all,samples/GSE312415/GSM9345411,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345412,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,25909,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345412,,,train,sda-all,samples/GSE312415/GSM9345412,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345413,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,21182,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345413,,,train,sda-all,samples/GSE312415/GSM9345413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345414,rectum,disease,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,12913,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1156,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345414,,,train,sda-all,samples/GSE312415/GSM9345414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345415,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1557,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1156,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345415,,,train,sda-all,samples/GSE312415/GSM9345415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345416,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,24060,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,6519,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345416,,,train,sda-all,samples/GSE312415/GSM9345416,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345417,rectum,disease,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,22395,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,6519,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345417,,,train,sda-all,samples/GSE312415/GSM9345417,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345418,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,27160,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,6519,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345418,,,train,sda-all,samples/GSE312415/GSM9345418,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345419,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,16855,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,6519,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345419,,,train,sda-all,samples/GSE312415/GSM9345419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345420,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,27090,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,Colon,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345420,,,train,sda-all,samples/GSE312415/GSM9345420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9345421,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,24677,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,Colon,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345421,,,train,sda-all,samples/GSE312415/GSM9345421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345422,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,18947,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,Colon,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345422,,,train,sda-all,samples/GSE312415/GSM9345422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345423,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,25955,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,Colon,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345423,,,train,sda-all,samples/GSE312415/GSM9345423,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345424,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,22416,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,Colon,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345424,,,train,sda-all,samples/GSE312415/GSM9345424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345425,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,26657,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,Colon,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345425,,,train,sda-all,samples/GSE312415/GSM9345425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345426,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,22267,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,Colon,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345426,,,train,sda-all,samples/GSE312415/GSM9345426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345427,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,27724,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001155,Colon,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345427,,,train,sda-all,samples/GSE312415/GSM9345427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345428,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,9655,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345428,,,train,sda-all,samples/GSE312415/GSM9345428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345429,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,8855,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345429,,,train,sda-all,samples/GSE312415/GSM9345429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345430,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,5117,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345430,,,train,sda-all,samples/GSE312415/GSM9345430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345431,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,14589,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345431,,,train,sda-all,samples/GSE312415/GSM9345431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345432,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,15107,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345432,,,train,sda-all,samples/GSE312415/GSM9345432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9345433,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,11996,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345433,,,train,sda-all,samples/GSE312415/GSM9345433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345434,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,37218,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345434,,,train,sda-all,samples/GSE312415/GSM9345434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345435,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,20804,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345435,,,train,sda-all,samples/GSE312415/GSM9345435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345436,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,22627,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345436,,,train,sda-all,samples/GSE312415/GSM9345436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345437,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,25693,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345437,,,train,sda-all,samples/GSE312415/GSM9345437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345438,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,26368,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345438,,,train,sda-all,samples/GSE312415/GSM9345438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345439,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,12861,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345439,,,train,sda-all,samples/GSE312415/GSM9345439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345440,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,18315,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345440,,,train,sda-all,samples/GSE312415/GSM9345440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345441,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,19965,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345441,,,train,sda-all,samples/GSE312415/GSM9345441,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345442,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,32498,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345442,,,train,sda-all,samples/GSE312415/GSM9345442,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345443,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,14463,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345443,,,train,sda-all,samples/GSE312415/GSM9345443,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9345444,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,17433,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345444,,,train,sda-all,samples/GSE312415/GSM9345444,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345445,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,19497,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345445,,,train,sda-all,samples/GSE312415/GSM9345445,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345446,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,19873,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345446,,,train,sda-all,samples/GSE312415/GSM9345446,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345447,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,12517,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345447,,,train,sda-all,samples/GSE312415/GSM9345447,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345448,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,16863,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345448,,,train,sda-all,samples/GSE312415/GSM9345448,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345449,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,18859,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345449,,,train,sda-all,samples/GSE312415/GSM9345449,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345450,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,17037,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345450,,,train,sda-all,samples/GSE312415/GSM9345450,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345451,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,16610,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345451,,,train,sda-all,samples/GSE312415/GSM9345451,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9345452,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,16576,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345452,,,train,sda-all,samples/GSE312415/GSM9345452,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345453,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,13004,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345453,,,train,sda-all,samples/GSE312415/GSM9345453,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345454,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,13155,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345454,,,train,sda-all,samples/GSE312415/GSM9345454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345455,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,20361,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345455,,,train,sda-all,samples/GSE312415/GSM9345455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9345456,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,16059,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345456,,,train,sda-all,samples/GSE312415/GSM9345456,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345457,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,14159,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1157,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345457,,,train,sda-all,samples/GSE312415/GSM9345457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345458,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,19046,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1204,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345458,,,train,sda-all,samples/GSE312415/GSM9345458,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345459,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,20559,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [CosMx],GSE312415,GSE312415,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,1202,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42049732,,GSM9345459,,,train,sda-all,samples/GSE312415/GSM9345459,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345477,small intestine,disease,inflammatory bowel disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,18573,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Ileum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999081473316803,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345477,,,train,sda-all,samples/GSE312420/GSM9345477,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345478,small intestine,disease,intestinal disorder;immune system disorder,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,43530,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Ileum,MONDO:0005020;MONDO:0005046,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000020549071181,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345478,,,train,sda-all,samples/GSE312420/GSM9345478,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345479,small intestine,disease,,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,14746,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Ileum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000304383116884,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345479,,,train,sda-all,samples/GSE312420/GSM9345479,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345480,small intestine,disease,inflammatory bowel disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,39289,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Ileum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000281762295081,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345480,,,train,sda-all,samples/GSE312420/GSM9345480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345481,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,37372,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998534583821796,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345481,,,train,sda-all,samples/GSE312420/GSM9345481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345482,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,18004,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999690891605989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345482,,,train,sda-all,samples/GSE312420/GSM9345482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345483,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,29364,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345483,,,train,sda-all,samples/GSE312420/GSM9345483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9345484,rectum,disease,immune system disorder,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,33863,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005046,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997494989979957,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345484,,,train,sda-all,samples/GSE312420/GSM9345484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345485,small intestine,disease,intestinal disorder;immune system disorder,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,32830,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Ileum,MONDO:0005020;MONDO:0005046,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000162069778405,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345485,,,train,sda-all,samples/GSE312420/GSM9345485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345486,small intestine,disease,,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38405,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Ileum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000154830718414,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345486,,,train,sda-all,samples/GSE312420/GSM9345486,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345487,rectum,disease,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,50568,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999948524365133,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345487,,,train,sda-all,samples/GSE312420/GSM9345487,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345488,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,60961,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000232270052648,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345488,,,train,sda-all,samples/GSE312420/GSM9345488,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345489,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,32860,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999483737738765,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345489,,,train,sda-all,samples/GSE312420/GSM9345489,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345490,rectum,disease,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,23801,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999759747391543,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345490,,,train,sda-all,samples/GSE312420/GSM9345490,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345491,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19288,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999909737982256,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345491,,,train,sda-all,samples/GSE312420/GSM9345491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345492,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55979,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999827839500504,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345492,,,train,sda-all,samples/GSE312420/GSM9345492,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345493,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,32120,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998798076923084,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345493,,,train,sda-all,samples/GSE312420/GSM9345493,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345494,rectum,disease,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,27515,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000232270052648,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345494,,,train,sda-all,samples/GSE312420/GSM9345494,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345495,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,49481,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999827839500504,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345495,,,train,sda-all,samples/GSE312420/GSM9345495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345496,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,26216,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49994212962962964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345496,,,train,sda-all,samples/GSE312420/GSM9345496,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345497,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,33821,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999828273114433,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345497,,,train,sda-all,samples/GSE312420/GSM9345497,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345498,rectum,disease,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,28223,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999954094748439,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345498,,,train,sda-all,samples/GSE312420/GSM9345498,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345499,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,48947,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499979332010582,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345499,,,train,sda-all,samples/GSE312420/GSM9345499,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345500,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24369,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999589827727645,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345500,,,train,sda-all,samples/GSE312420/GSM9345500,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345501,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,26686,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000265330188679,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345501,,,train,sda-all,samples/GSE312420/GSM9345501,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345502,rectum,disease,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24852,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000077407369181,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345502,,,train,sda-all,samples/GSE312420/GSM9345502,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345503,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,36654,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999655615759026,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42049732,,GSM9345503,,,train,sda-all,samples/GSE312420/GSM9345503,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345504,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,23741,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49994212962962964,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345504,,,train,sda-all,samples/GSE312420/GSM9345504,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345505,rectum,normal,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,37399,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345505,,,train,sda-all,samples/GSE312420/GSM9345505,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345506,rectum,disease,,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,35904,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49999655615759026,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345506,,,train,sda-all,samples/GSE312420/GSM9345506,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9345507,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,39937,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000149192067572,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345507,,,train,sda-all,samples/GSE312420/GSM9345507,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9345508,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,34047,Performance differences in spatial transcriptomics platforms identify Treg biology in human inflammatory bowel disease [Xenium],GSE312420,GSE312420,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,rectum,MONDO:0005265,luna,,,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49998798076923084,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42049732,,GSM9345508,,,train,sda-all,samples/GSE312420/GSM9345508,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9347312,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,9742,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,compoun 48/80 (2-step control),luna,not stated,,not stated,,GSE312493:mouse 1,mouse 1,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347312,,,test,sda-all,samples/GSE312493/GSM9347312,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347313,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,21135,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,untreated (UT),luna,not stated,,not stated,,GSE312493:mouse 2,mouse 2,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347313,,,test,sda-all,samples/GSE312493/GSM9347313,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9347314,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,12543,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,compound 48/80 + capsaicin (2-step activation),luna,not stated,,not stated,,GSE312493:mouse 4,mouse 4,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347314,,,test,sda-all,samples/GSE312493/GSM9347314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9347315,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,6625,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,capsaicin (1-step activation),luna,not stated,,not stated,,GSE312493:mouse 4,mouse 4,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347315,,,test,sda-all,samples/GSE312493/GSM9347315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347316,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,4041,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,compoun 48/80 (2-step control),luna,not stated,,not stated,,GSE312493:mouse 3,mouse 3,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347316,,,test,sda-all,samples/GSE312493/GSM9347316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9347317,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,17992,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,untreated (UT),luna,not stated,,not stated,,GSE312493:mouse 4,mouse 4,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347317,,,test,sda-all,samples/GSE312493/GSM9347317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9347318,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,10060,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,compound 48/80 + capsaicin (2-step activation),luna,not stated,,not stated,,GSE312493:mouse 8,mouse 8,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347318,,,test,sda-all,samples/GSE312493/GSM9347318,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347319,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,9002,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,capsaicin (1-step activation),luna,not stated,,not stated,,GSE312493:mouse 8,mouse 8,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347319,,,test,sda-all,samples/GSE312493/GSM9347319,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347320,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,8075,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,compoun 48/80 (2-step control),luna,not stated,,not stated,,GSE312493:mouse 9,mouse 9,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347320,,,test,sda-all,samples/GSE312493/GSM9347320,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347322,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,13509,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,compound 48/80 + capsaicin (2-step activation),luna,not stated,,not stated,,GSE312493:mouse 2,mouse 2,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347322,,,test,sda-all,samples/GSE312493/GSM9347322,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347323,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,7028,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,capsaicin (1-step activation),luna,not stated,,not stated,,GSE312493:mouse 7,mouse 7,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347323,,,test,sda-all,samples/GSE312493/GSM9347323,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347324,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,12302,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,compound 48/80 + capsaicin (2-step activation),luna,not stated,,not stated,,GSE312493:mouse 6,mouse 6,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347324,,,test,sda-all,samples/GSE312493/GSM9347324,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9347325,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,8002,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,capsaicin (1-step activation),luna,not stated,,not stated,,GSE312493:mouse 5,mouse 5,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347325,,,test,sda-all,samples/GSE312493/GSM9347325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9347326,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,11950,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,compoun 48/80 (2-step control),luna,not stated,,not stated,,GSE312493:mouse 4,mouse 4,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347326,,,test,sda-all,samples/GSE312493/GSM9347326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347327,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,10708,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,untreated (UT),luna,not stated,,not stated,,GSE312493:mouse 5,mouse 5,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347327,,,test,sda-all,samples/GSE312493/GSM9347327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9347328,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,12530,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,compound 48/80 + capsaicin (2-step activation),luna,not stated,,not stated,,GSE312493:mouse 9,mouse 9,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347328,,,test,sda-all,samples/GSE312493/GSM9347328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9347330,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,7351,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,compoun 48/80 (2-step control),luna,not stated,,not stated,,GSE312493:mouse 7,mouse 7,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347330,,,test,sda-all,samples/GSE312493/GSM9347330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9347331,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,5934,early neurogenic inflammation requires stepwise DC aggregation for optimal induction of immune response,GSE312493,GSE312493,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,untreated (UT),luna,not stated,,not stated,,GSE312493:mouse 9,mouse 9,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,5003,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42580342,,GSM9347331,,,test,sda-all,samples/GSE312493/GSM9347331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9351704,liver,disease,metabolic dysfunction-associated steatotic liver disease,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,405940,NanoString CosMx SMI (human) on ten human MASLD samples,GSE312698,GSE312698,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,liver,MONDO:0013209,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1176,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42151416,,GSM9351704,,,train,sda-all,samples/GSE312698/GSM9351704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9351705,liver,disease,metabolic dysfunction-associated steatotic liver disease,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,70886,NanoString CosMx SMI (human) on ten human MASLD samples,GSE312698,GSE312698,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,liver,MONDO:0013209,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1176,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42151416,,GSM9351705,,,train,sda-all,samples/GSE312698/GSM9351705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9351706,liver,disease,metabolic dysfunction-associated steatotic liver disease,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,35537,NanoString CosMx SMI (human) on ten human MASLD samples,GSE312698,GSE312698,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,liver,MONDO:0013209,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1176,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42151416,,GSM9351706,,,train,sda-all,samples/GSE312698/GSM9351706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9351707,liver,disease,metabolic dysfunction-associated steatotic liver disease,liver,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,40313,NanoString CosMx SMI (human) on ten human MASLD samples,GSE312698,GSE312698,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,liver,MONDO:0013209,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1176,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42151416,,GSM9351707,,,train,sda-all,samples/GSE312698/GSM9351707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356905,spinal cord,perturbation,,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,962,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003038,Thoracic spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49260486056599107,platform_constant,0.49999934407216834,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356905,,,train,hesrt,samples/GSE312910/GSM9356905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356906,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1157,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,Lumbar spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49260486056599107,platform_constant,0.4999863080122431,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356906,,,train,hesrt,samples/GSE312910/GSM9356906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356907,spinal cord,perturbation,,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1098,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003038,Thoracic spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.4907033630543836,platform_constant,0.5000085081408399,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356907,,,train,hesrt,samples/GSE312910/GSM9356907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356908,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1429,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,Lumbar spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.4907033630543836,platform_constant,0.5000008356462918,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356908,,,train,hesrt,samples/GSE312910/GSM9356908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356909,spinal cord,perturbation,,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,900,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003038,Thoracic spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49019607843137253,platform_constant,0.5000065802146106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356909,,,train,hesrt,samples/GSE312910/GSM9356909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356910,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1196,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,Lumbar spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49019607843137253,platform_constant,0.49998651616360235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356910,,,train,hesrt,samples/GSE312910/GSM9356910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356911,spinal cord,perturbation,,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,987,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003038,Thoracic spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49019607843137253,platform_constant,0.49999503850123045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356911,,,train,hesrt,samples/GSE312910/GSM9356911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356912,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1394,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,Lumbar spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49019607843137253,platform_constant,0.4999873076658072,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356912,,,train,hesrt,samples/GSE312910/GSM9356912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356913,spinal cord,perturbation,,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,975,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003038,Thoracic spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49260486056599107,platform_constant,0.4999903797727705,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356913,,,train,hesrt,samples/GSE312910/GSM9356913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356914,spinal cord,perturbation,,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1241,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003038,Thoracic spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49260486056599107,platform_constant,0.5000120069115641,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356914,,,train,hesrt,samples/GSE312910/GSM9356914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356915,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,968,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,Lumbar spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.4907033630543836,platform_constant,0.4999914083336366,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356915,,,train,hesrt,samples/GSE312910/GSM9356915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356916,spinal cord,perturbation,,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1426,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003038,Thoracic spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49260486056599107,platform_constant,0.5000129052963515,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356916,,,train,hesrt,samples/GSE312910/GSM9356916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356917,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1010,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,Lumbar spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49260486056599107,platform_constant,0.5000131401251899,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356917,,,train,hesrt,samples/GSE312910/GSM9356917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356918,spinal cord,perturbation,,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1273,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003038,Thoracic spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.4907033630543836,platform_constant,0.5000041011184725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356918,,,train,hesrt,samples/GSE312910/GSM9356918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356919,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1127,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,Lumbar spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49260486056599107,platform_constant,0.4999976596837136,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356919,,,train,hesrt,samples/GSE312910/GSM9356919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9356920,spinal cord,disease,,thoracic spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1551,Lesion-remote astrocytes govern microglia-mediated white matter repair IV,GSE312910,GSE312910,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003038,Thoracic spinal cord,,luna,,uninjured/3/7/28 days post injury,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,0.49260486056599107,platform_constant,0.5000019672173606,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41407858,,GSM9356920,,,train,hesrt,samples/GSE312910/GSM9356920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9357155,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,11788,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312932,GSE312932,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005100,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9392,counts,um,1.0,verified,0.4999896562100354,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357155,,,train,sda-all,samples/GSE312932/GSM9357155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357156,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,13706,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312932,GSE312932,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005100,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9392,counts,um,1.0,verified,0.5000196313440238,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357156,,,train,sda-all,samples/GSE312932/GSM9357156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357157,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,14700,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312932,GSE312932,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005100,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9392,counts,um,1.0,verified,0.49999070017359676,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357157,,,train,sda-all,samples/GSE312932/GSM9357157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357158,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6953,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312932,GSE312932,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005100,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9392,counts,um,1.0,verified,0.49999383020730503,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357158,,,train,sda-all,samples/GSE312932/GSM9357158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357159,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10967,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312932,GSE312932,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005100,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9392,counts,um,1.0,verified,0.4999793577981651,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357159,,,train,sda-all,samples/GSE312932/GSM9357159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357160,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,9956,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312932,GSE312932,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005100,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9392,counts,um,1.0,verified,0.49997420907840434,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41411065,,GSM9357160,,,train,sda-all,samples/GSE312932/GSM9357160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357161,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16147,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312932,GSE312932,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005100,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9392,counts,um,1.0,verified,0.4999885247406591,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41411065,,GSM9357161,,,train,sda-all,samples/GSE312932/GSM9357161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357162,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6431,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312932,GSE312932,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005100,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9392,counts,um,1.0,verified,0.5000359269143912,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357162,,,train,sda-all,samples/GSE312932/GSM9357162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357163,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,15011,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312932,GSE312932,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005100,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9392,counts,um,1.0,verified,0.50001953125,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357163,,,train,sda-all,samples/GSE312932/GSM9357163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9357164,skin,disease,systemic sclerosis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,9893,"Spatial analyses of early, untreated SSc skin identify a proinflammatory vascular niche of macrophage-fibroblast signaling",GSE312932,GSE312932,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0005100,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hSkin_100g,xenium-3.0.0.15,cell,9392,counts,um,1.0,verified,0.4999867272298254,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41411065,,GSM9357164,,,train,sda-all,samples/GSE312932/GSM9357164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.38, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9358871,lung,disease,chronic obstructive pulmonary disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,261504,Spatial transcriptomic profiling of human lung tissue in chronic obstructive pulmonary disease (COPD) [Xenium],GSE313006,GSE313006,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005002,luna,COPD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999911863211704,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41578022;42395348,,GSM9358871,,,train,sda-all,samples/GSE313006/GSM9358871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9358872,lung,disease,chronic obstructive pulmonary disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,316562,Spatial transcriptomic profiling of human lung tissue in chronic obstructive pulmonary disease (COPD) [Xenium],GSE313006,GSE313006,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005002,luna,COPD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000019324916258,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41578022;42395348,,GSM9358872,,,train,sda-all,samples/GSE313006/GSM9358872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9358873,lung,disease,chronic obstructive pulmonary disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,269706,Spatial transcriptomic profiling of human lung tissue in chronic obstructive pulmonary disease (COPD) [Xenium],GSE313006,GSE313006,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005002,luna,COPD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999889777202986,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41578022;42395348,,GSM9358873,,,train,sda-all,samples/GSE313006/GSM9358873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9358874,lung,disease,chronic obstructive pulmonary disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,219246,Spatial transcriptomic profiling of human lung tissue in chronic obstructive pulmonary disease (COPD) [Xenium],GSE313006,GSE313006,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005002,luna,COPD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999039253362615,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41578022;42395348,,GSM9358874,,,train,sda-all,samples/GSE313006/GSM9358874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9360613,lung,disease,lung neoplasm;cancer;melanoma,lung,metastasis,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,426641,The Dichotomy of Tumor Control by Recruited and Resident Tumor-Associated Macrophages,GSE313081,GSE313081,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0021117;MONDO:0004992;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,mLung_300g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.499998850521863,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9360613,,,train,sda-all,samples/GSE313081/GSM9360613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9360614,lung,disease,lung neoplasm;cancer;melanoma,lung,metastasis,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,517413,The Dichotomy of Tumor Control by Recruited and Resident Tumor-Associated Macrophages,GSE313081,GSE313081,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0021117;MONDO:0004992;MONDO:0005105,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,mLung_300g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.4999982760205957,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9360614,,,train,sda-all,samples/GSE313081/GSM9360614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9360615,lung,disease,lung neoplasm;adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,876258,The Dichotomy of Tumor Control by Recruited and Resident Tumor-Associated Macrophages,GSE313081,GSE313081,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0021117;MONDO:0004970,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,mLung_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.5000021781746896,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9360615,,,train,sda-all,samples/GSE313081/GSM9360615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9360616,lung,disease,lung neoplasm;adenocarcinoma,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,678432,The Dichotomy of Tumor Control by Recruited and Resident Tumor-Associated Macrophages,GSE313081,GSE313081,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0021117;MONDO:0004970,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,mLung_100g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.4999956440301433,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9360616,,,train,sda-all,samples/GSE313081/GSM9360616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9366444,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,6072,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,14 dpa,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366444,,,train,sda-all,samples/GSE313338/GSM9366444,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.56, ""life_stage"": 0.58}",uberon;life_stage,low_confidence_annotation
GSM9366445,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,10349,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,14 dpa,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999879526366515,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366445,,,train,sda-all,samples/GSE313338/GSM9366445,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.81, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9366446,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,13102,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,14 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997500000000006,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366446,,,train,sda-all,samples/GSE313338/GSM9366446,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.78, ""life_stage"": 0.93}",,
GSM9366447,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7375,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,14 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000255990169977,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366447,,,train,sda-all,samples/GSE313338/GSM9366447,sda-tissue-disease-2.4,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.81, ""life_stage"": 0.77}",,
GSM9366448,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7703,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,14 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997619695320994,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366448,,,train,sda-all,samples/GSE313338/GSM9366448,sda-tissue-disease-2.4,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.79, ""life_stage"": 0.71}",,
GSM9366449,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,36333,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,14 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500002876472754,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366449,,,train,sda-all,samples/GSE313338/GSM9366449,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.58, ""life_stage"": 0.63}",uberon,low_confidence_annotation
GSM9366450,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1951,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,7 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998354180381827,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366450,,,train,sda-all,samples/GSE313338/GSM9366450,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.77, ""life_stage"": 0.78}",,
GSM9366451,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,2125,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,7 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49996592148309704,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366451,,,train,sda-all,samples/GSE313338/GSM9366451,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.73, ""life_stage"": 0.92}",,
GSM9366452,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,2170,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,7 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000408719346049,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366452,,,train,sda-all,samples/GSE313338/GSM9366452,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.5700000000000001, ""life_stage"": 0.8}",uberon,low_confidence_annotation
GSM9366453,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,2290,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,7 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000578703703704,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366453,,,train,sda-all,samples/GSE313338/GSM9366453,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.87, ""life_stage"": 0.88}",,
GSM9366454,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1742,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,7 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999948644207067,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366454,,,train,sda-all,samples/GSE313338/GSM9366454,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.77, ""life_stage"": 0.89}",,
GSM9366455,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1698,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,7 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000256884504727,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366455,,,train,sda-all,samples/GSE313338/GSM9366455,sda-tissue-disease-2.4,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.68, ""life_stage"": 0.8}",,
GSM9366456,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,2244,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,7 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000238549618321,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366456,,,train,sda-all,samples/GSE313338/GSM9366456,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.65, ""life_stage"": 0.65}",,
GSM9366457,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,2287,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,7 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999666118758989,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366457,,,train,sda-all,samples/GSE313338/GSM9366457,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.8, ""life_stage"": 0.77}",,
GSM9366458,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,46032,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,7 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000023044660552,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366458,,,train,sda-all,samples/GSE313338/GSM9366458,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.73, ""life_stage"": 0.91}",,
GSM9366459,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38930,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,10 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366459,,,train,sda-all,samples/GSE313338/GSM9366459,sda-tissue-disease-2.4,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.72, ""life_stage"": 0.81}",,
GSM9366460,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,25364,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,10 dpa,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999840357598978,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366460,,,train,sda-all,samples/GSE313338/GSM9366460,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.87, ""life_stage"": 0.89}",,
GSM9366461,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,6240,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,mature,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000370919881306,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366461,,,train,sda-all,samples/GSE313338/GSM9366461,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.55, ""life_stage"": 0.56}",uberon;life_stage,low_confidence_annotation
GSM9366462,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,11342,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,mature,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998455041713874,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366462,,,train,sda-all,samples/GSE313338/GSM9366462,sda-tissue-disease-2.4,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.77, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9366463,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,10770,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,mature,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000029373751615,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366463,,,train,sda-all,samples/GSE313338/GSM9366463,sda-tissue-disease-2.4,"{""organ"": 0.88, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.55, ""life_stage"": 0.59}",uberon;life_stage,low_confidence_annotation
GSM9366464,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,6880,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,mature,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896694214876,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366464,,,train,sda-all,samples/GSE313338/GSM9366464,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.59, ""life_stage"": 0.51}",uberon;life_stage,low_confidence_annotation
GSM9366465,skeletal muscle,perturbation,,myotome,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,46943,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0003082,Tail 5 myotome post amputation,,luna,,mature,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999926843542723,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9366465,,,train,sda-all,samples/GSE313338/GSM9366465,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.78, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9366466,embryo (whole),normal,,embryo,whole embryo/organism,Ambystoma mexicanum,axolotl,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,3114,"Xenium spatial transcriptomics of stage 28 embryos and regenerating 3 cm axolotl tails (3, 7, 10, 14 dpa) including mature unamputated tails",GSE313338,GSE313338,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0000922,whole_embryo,,luna,,embryo,luna,embryonic,,not stated,,,,fresh frozen,fresh frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998782151208104,VERIFIED,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9366466,,,train,sda-all,samples/GSE313338/GSM9366466,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.43, ""uberon"": 0.45, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9366858,small intestine,perturbation,,jejunum,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),300700,Intestinal BMP SMADs impart the mid-villus pattern via direct targeting of villus zonation genes and by controlling a transcription factor hierarchy [Spatial Transcriptomics],GSE313353,GSE313353,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002115,Jejunum of small intestine,,luna,,tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,4.322969879576025,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9366858,,,train,sda-all,samples/GSE313353/GSM9366858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9367517,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2939,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_None_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:149,149,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.143864679945749,platform_constant,4.143864679945749,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367517,,,train,hesrt,samples/GSE313407/GSM9367517,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9367518,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3027,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_None_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:147,147,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.142214835346103,platform_constant,4.142214835346103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367518,,,train,hesrt,samples/GSE313407/GSM9367518,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9367519,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,1866,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Sham_None_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:150,150,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.146064642814383,platform_constant,4.146064642814383,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367519,,,train,hesrt,samples/GSE313407/GSM9367519,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9367520,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2824,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_None_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:142,142,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.141665023096038,platform_constant,4.141665023096038,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367520,,,train,hesrt,samples/GSE313407/GSM9367520,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9367521,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2990,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_None_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:140,140,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.177411389125443,platform_constant,4.177411389125443,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367521,,,train,hesrt,samples/GSE313407/GSM9367521,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM9367522,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2546,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Sham_None_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:141,141,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.177961370428271,platform_constant,4.177961370428271,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367522,,,train,hesrt,samples/GSE313407/GSM9367522,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9367523,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2288,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Sham_None_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:143,143,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.177961370428271,platform_constant,4.177961370428271,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367523,,,train,hesrt,samples/GSE313407/GSM9367523,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9367524,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2724,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Sham_None_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:184,184,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.218889131053135,platform_constant,4.218889131053135,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367524,,,train,hesrt,samples/GSE313407/GSM9367524,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9367525,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3258,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_None_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:177,177,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.32566374622867,platform_constant,4.32566374622867,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367525,,,train,hesrt,samples/GSE313407/GSM9367525,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.97}",,
GSM9367526,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2294,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_None_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:181,181,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.16681401389106,platform_constant,4.16681401389106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367526,,,train,hesrt,samples/GSE313407/GSM9367526,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9367527,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2514,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_None_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:176,176,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.325936731858362,platform_constant,4.325936731858362,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367527,,,train,hesrt,samples/GSE313407/GSM9367527,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.86}",,
GSM9367528,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2602,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Sham_None_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:182,182,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.167536048583823,platform_constant,4.167536048583823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367528,,,train,hesrt,samples/GSE313407/GSM9367528,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9367529,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2345,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,Sham_None_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:183,183,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.1670935064702075,platform_constant,4.1670935064702075,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367529,,,train,hesrt,samples/GSE313407/GSM9367529,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9367530,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2732,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:223,223,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.325936731858362,platform_constant,4.325936731858362,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367530,,,train,hesrt,samples/GSE313407/GSM9367530,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.89}",,
GSM9367531,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2620,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:224,224,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.328318715824808,platform_constant,4.328318715824808,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367531,,,train,hesrt,samples/GSE313407/GSM9367531,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.93}",,
GSM9367532,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2858,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_Ctrl_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:206,206,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.168863257100049,platform_constant,4.168863257100049,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367532,,,train,hesrt,samples/GSE313407/GSM9367532,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9367533,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2916,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_Ctrl_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:213,213,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.169748205043665,platform_constant,4.169748205043665,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367533,,,train,hesrt,samples/GSE313407/GSM9367533,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 0.81}",,
GSM9367534,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2230,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:225,225,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.168420825796282,platform_constant,4.168420825796282,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367534,,,train,hesrt,samples/GSE313407/GSM9367534,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 0.84}",,
GSM9367535,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2749,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:235,235,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.330973555184158,platform_constant,4.330973555184158,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367535,,,train,hesrt,samples/GSE313407/GSM9367535,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 0.98}",,
GSM9367536,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2499,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:236,236,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.200442374797255,platform_constant,4.200442374797255,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367536,,,train,hesrt,samples/GSE313407/GSM9367536,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9367537,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,3136,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_Ctrl_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:245,245,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.167699234990608,platform_constant,4.167699234990608,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367537,,,train,hesrt,samples/GSE313407/GSM9367537,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.98}",,
GSM9367538,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2449,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_Ctrl_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:244,244,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.168584046847946,platform_constant,4.168584046847946,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367538,,,train,hesrt,samples/GSE313407/GSM9367538,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9367539,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2844,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_Ctrl_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:243_2,243_2,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.166650862145119,platform_constant,4.166650862145119,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367539,,,train,hesrt,samples/GSE313407/GSM9367539,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9367540,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2810,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:237,237,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.327706642279503,platform_constant,4.327706642279503,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367540,,,train,hesrt,samples/GSE313407/GSM9367540,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9367541,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2459,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:239,239,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.167536048583823,platform_constant,4.167536048583823,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367541,,,train,hesrt,samples/GSE313407/GSM9367541,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 0.9500000000000001}",,
GSM9367542,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2706,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_Ctrl_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:248,248,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.169469038035548,platform_constant,4.169469038035548,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367542,,,train,hesrt,samples/GSE313407/GSM9367542,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9367543,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2750,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_Ctrl_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:249,249,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.167978488390885,platform_constant,4.167978488390885,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367543,,,train,hesrt,samples/GSE313407/GSM9367543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9367544,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2635,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_Ctrl_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:247,247,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.1685840468479265,platform_constant,4.1685840468479265,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367544,,,train,hesrt,samples/GSE313407/GSM9367544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.97, ""life_stage"": 0.97}",,
GSM9367545,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2730,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:256,256,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.166650862145138,platform_constant,4.166650862145138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367545,,,train,hesrt,samples/GSE313407/GSM9367545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9367546,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2660,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:263,263,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.323451329292707,platform_constant,4.323451329292707,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367546,,,train,hesrt,samples/GSE313407/GSM9367546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9367547,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2717,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:264,264,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.323893885128808,platform_constant,4.323893885128808,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367547,,,train,hesrt,samples/GSE313407/GSM9367547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9367548,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2999,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:266,266,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.166371642418682,platform_constant,4.166371642418682,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367548,,,train,hesrt,samples/GSE313407/GSM9367548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9367549,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2844,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_GR_2DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:262,262,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.322566489341676,platform_constant,4.322566489341676,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367549,,,train,hesrt,samples/GSE313407/GSM9367549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.96, ""life_stage"": 0.98}",,
GSM9367550,brain,disease,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E,2741,Adult Mouse Controlled Cortical Impact Visium Spatial Transcriptomics,GSE313407,GSE313407,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,CCI,CCI_Ctrl_7DPI,age rule: age with unit,not stated,15–20 weeks,not stated,,GSE313407:211,211,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.327264134713492,platform_constant,4.327264134713492,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41250842,10.1177/08977151251390528,GSM9367550,,,train,hesrt,samples/GSE313407/GSM9367550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.96, ""life_stage"": 0.9500000000000001}",,
GSM9368374,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1871,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,GSE313471,GSE313471,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.764768642914155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368374,,,train,sda-all,samples/GSE313471/GSM9368374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.42, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9368375,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1814,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,GSE313471,GSE313471,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.170825924784631,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368375,,,train,sda-all,samples/GSE313471/GSM9368375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.63, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9368376,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1833,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,GSE313471,GSE313471,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.936952726128304,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368376,,,train,sda-all,samples/GSE313471/GSM9368376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.39, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9368377,bone marrow,normal,,bone marrow,cell culture,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2102,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,GSE313471,GSE313471,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.155166401927711,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368377,,,train,sda-all,samples/GSE313471/GSM9368377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6000000000000001, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9368378,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1941,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,GSE313471,GSE313471,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.301593770849303,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368378,,,train,sda-all,samples/GSE313471/GSM9368378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9368379,bone marrow,normal,,bone marrow,cell culture,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2008,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,GSE313471,GSE313471,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.0496465629193725,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368379,,,train,sda-all,samples/GSE313471/GSM9368379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9368380,bone marrow,normal,,bone marrow,cell culture,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1712,Identification of a long-term surviving human mesenchymal stromal cell subpopulation upon intradermal injection in immunodeficient mice,GSE313471,GSE313471,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.8728710219334697,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42365332,,GSM9368380,,,train,sda-all,samples/GSE313471/GSM9368380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9369728,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,female,Visium,Visium,True,H&E,731,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.264170854536493,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369728,,,train,sda-all,samples/GSE313530/GSM9369728,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9369729,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,female,Visium,Visium,True,H&E,596,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.264311195832739,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369729,,,train,sda-all,samples/GSE313530/GSM9369729,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9369730,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,male,Visium,Visium,True,H&E,1013,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.238912935715556,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369730,,,train,sda-all,samples/GSE313530/GSM9369730,sda-tissue-disease-2.4,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369731,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,male,Visium,Visium,True,H&E,1457,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.312356557264456,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369731,,,train,sda-all,samples/GSE313530/GSM9369731,sda-tissue-disease-2.4,"{""organ"": 0.8200000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369732,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,female,Visium,Visium,True,H&E,1619,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.264201471049344,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369732,,,train,sda-all,samples/GSE313530/GSM9369732,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9369733,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,female,Visium,Visium,True,H&E,1617,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.264268807288295,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369733,,,train,sda-all,samples/GSE313530/GSM9369733,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9369734,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,male,Visium,Visium,True,H&E,1212,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.312936082131381,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369734,,,train,sda-all,samples/GSE313530/GSM9369734,sda-tissue-disease-2.4,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369735,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,male,Visium,Visium,True,H&E,1458,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.312188978138357,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369735,,,train,sda-all,samples/GSE313530/GSM9369735,sda-tissue-disease-2.4,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9369736,peripheral nerve,not stated,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,female,Visium,Visium,True,H&E,1242,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.100905706187213,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369736,,,train,sda-all,samples/GSE313530/GSM9369736,sda-tissue-disease-2.4,"{""organ"": 0.85, ""sample_kind"": 0.99, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369737,peripheral nerve,not stated,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,female,Visium,Visium,True,H&E,2587,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.099681427122882,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369737,,,train,sda-all,samples/GSE313530/GSM9369737,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9369738,peripheral nerve,not stated,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,male,Visium,Visium,True,H&E,1430,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.101271254029082,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369738,,,train,sda-all,samples/GSE313530/GSM9369738,sda-tissue-disease-2.4,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9369739,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,male,Visium,Visium,True,H&E,1777,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.100155321459233,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369739,,,train,sda-all,samples/GSE313530/GSM9369739,sda-tissue-disease-2.4,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9369740,peripheral nerve,not stated,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,female,Visium,Visium,True,H&E,2171,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.08535352945828,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369740,,,train,sda-all,samples/GSE313530/GSM9369740,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9369741,peripheral nerve,not stated,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,female,Visium,Visium,True,H&E,2092,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Female,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.08454301024371,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369741,,,train,sda-all,samples/GSE313530/GSM9369741,sda-tissue-disease-2.4,"{""organ"": 0.77, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369742,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,male,Visium,Visium,True,H&E,2077,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.0849607252421665,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369742,,,train,sda-all,samples/GSE313530/GSM9369742,sda-tissue-disease-2.4,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9369743,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,male,Visium,Visium,True,H&E,895,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,22000,counts,um,1.0,verified,4.084327046602387,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369743,,,train,sda-all,samples/GSE313530/GSM9369743,sda-tissue-disease-2.4,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9369744,peripheral nerve,not stated,,dorsal root ganglion,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,H&E,2258,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Papio anubis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,20842,counts,um,1.0,verified,4.066693913351573,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369744,,,train,sda-all,samples/GSE313530/GSM9369744,sda-tissue-disease-2.4,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM9369745,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,H&E,3119,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Papio anubis,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,20842,counts,um,1.0,verified,4.066194509313726,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369745,,,train,sda-all,samples/GSE313530/GSM9369745,sda-tissue-disease-2.4,"{""organ"": 0.88, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM9369746,peripheral nerve,not stated,,dorsal root ganglion,primary tissue,Papio anubis,olive baboon,not stated,unknown,Visium,Visium,True,H&E,3036,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9555,Papio anubis,9555,,False,False,GEO organism field,Papio anubis,Macaca mulatta,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,21369,counts,um,1.0,verified,4.066483841163155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369746,,,train,sda-all,samples/GSE313530/GSM9369746,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM9369747,peripheral nerve,normal,,dorsal root ganglion,primary tissue,Papio anubis,olive baboon,not stated,unknown,Visium,Visium,True,H&E,2642,Spatial transcriptomics dataset of non-human primates,GSE313530,GSE313530,9555,Papio anubis,9555,,False,False,GEO organism field,Papio anubis,Macaca mulatta,luna,UBERON:0000044,dorsal root ganglia,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,21369,counts,um,1.0,verified,4.066455813520429,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42146464,,GSM9369747,,,train,sda-all,samples/GSE313530/GSM9369747,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM9371392,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,280789,Spatial transcriptomic analysis of Naive or Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state,GSE313636,GSE313636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002116,mouse small intestine ileum,,luna,,,age rule: age with unit,juvenile,7.5 weeks,extracted field,female,,,,,release v3,imaging-based,Xenium,,,cell,13752,counts,um,1.0,verified,0.4999948334907889,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9371392,,,test,sda-all,samples/GSE313636/GSM9371392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9371393,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,169251,Spatial transcriptomic analysis of Naive or Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state,GSE313636,GSE313636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002116,mouse small intestine ileum,,luna,,,age rule: age with unit,juvenile,7.5 weeks,extracted field,female,,,,,release v3,imaging-based,Xenium,,,cell,13570,counts,um,1.0,verified,0.5000196037969459,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9371393,,,test,sda-all,samples/GSE313636/GSM9371393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9371394,small intestine,disease,Yersinia pseudotuberculosis infectious disease,ileum,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,274361,Spatial transcriptomic analysis of Naive or Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state,GSE313636,GSE313636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002116,mouse small intestine ileum,MONDO:0007024,luna,,Yersinia pseudotuberculosis,age rule: age with unit,juvenile,7.5 weeks,extracted field,female,,,,,release v3,imaging-based,Xenium,,,cell,13769,counts,um,1.0,verified,0.4999913977014658,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9371394,,,test,sda-all,samples/GSE313636/GSM9371394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9371395,small intestine,disease,Yersinia pseudotuberculosis infectious disease,ileum,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,204033,Spatial transcriptomic analysis of Naive or Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state,GSE313636,GSE313636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002116,mouse small intestine ileum,MONDO:0007024,luna,,Yersinia pseudotuberculosis,age rule: age with unit,juvenile,7.5 weeks,extracted field,female,,,,,release v3,imaging-based,Xenium,,,cell,13727,counts,um,1.0,verified,0.5000071665180277,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9371395,,,test,sda-all,samples/GSE313636/GSM9371395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372001,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,95675,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,GSE313662,GSE313662,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic adenocarcinoma,MONDO:0005184,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,9656,counts,um,1.0,verified,0.499993795499669,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372001,,,train,sda-all,samples/GSE313662/GSM9372001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372002,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,169765,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,GSE313662,GSE313662,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic adenocarcinoma,MONDO:0005184,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,9656,counts,um,1.0,verified,0.4999976998803938,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372002,,,train,sda-all,samples/GSE313662/GSM9372002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372003,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,133272,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,GSE313662,GSE313662,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic adenocarcinoma,MONDO:0005184,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,9656,counts,um,1.0,verified,0.5000048671274214,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372003,,,train,sda-all,samples/GSE313662/GSM9372003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372004,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,181033,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,GSE313662,GSE313662,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic adenocarcinoma,MONDO:0005184,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,9656,counts,um,1.0,verified,0.500003810477725,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372004,,,train,sda-all,samples/GSE313662/GSM9372004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372005,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,238408,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,GSE313662,GSE313662,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic adenocarcinoma,MONDO:0005184,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,9656,counts,um,1.0,verified,0.5000011492139377,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372005,,,train,sda-all,samples/GSE313662/GSM9372005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372006,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,159670,Neoadjuvant modified FOLFIRINOX plus nivolumab in borderline-resectable pancreatic ductal adenocarcinoma: a pilot phase 1 trial,GSE313662,GSE313662,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreatic adenocarcinoma,MONDO:0005184,luna,Pancreatic adenocarcinoma,Neoadjuvant treatment with FOLFIRINOX and nivolumab,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,hPancreas_100g,xenium-3.0.0.15,cell,9656,counts,um,1.0,verified,0.5000048671274214,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41620440,,GSM9372006,,,train,sda-all,samples/GSE313662/GSM9372006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372543,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3698,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.175395199567525,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372543,,,train,sda-all,samples/GSE313694/GSM9372543,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9372544,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3054,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.2192323628514865,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372544,,,train,sda-all,samples/GSE313694/GSM9372544,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372545,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2302,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.040612423173297,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372545,,,train,sda-all,samples/GSE313694/GSM9372545,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372546,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3493,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.2867854899464835,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372546,,,train,sda-all,samples/GSE313694/GSM9372546,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372547,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3985,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.157346838373332,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372547,,,train,sda-all,samples/GSE313694/GSM9372547,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372548,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),4309,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.2729320208546735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372548,,,train,sda-all,samples/GSE313694/GSM9372548,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372549,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3802,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.26400534128472,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks bluish),41663806,,GSM9372549,,,train,sda-all,samples/GSE313694/GSM9372549,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372550,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1723,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.149157566443168,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372550,,,train,sda-all,samples/GSE313694/GSM9372550,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372551,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2105,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.11644484571292,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372551,,,train,sda-all,samples/GSE313694/GSM9372551,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9372552,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2397,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.5237822752205625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372552,,,train,sda-all,samples/GSE313694/GSM9372552,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372553,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3430,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.098190487493853,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372553,,,train,sda-all,samples/GSE313694/GSM9372553,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9372554,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2635,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.018373259813249,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372554,,,train,sda-all,samples/GSE313694/GSM9372554,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372555,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3676,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.05218859400802,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372555,,,train,sda-all,samples/GSE313694/GSM9372555,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372556,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3619,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.1786838494652185,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372556,,,train,sda-all,samples/GSE313694/GSM9372556,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372557,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2491,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.115511010879454,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372557,,,train,sda-all,samples/GSE313694/GSM9372557,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372558,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2156,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.351215911653794,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372558,,,train,sda-all,samples/GSE313694/GSM9372558,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372559,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),428,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.473940379673687,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372559,,,train,sda-all,samples/GSE313694/GSM9372559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372560,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3105,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.491234989183572,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372560,,,train,sda-all,samples/GSE313694/GSM9372560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9372561,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1518,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.650267897590885,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,stain looks off; check whether it is H&E,41663806,,GSM9372561,,,train,sda-all,samples/GSE313694/GSM9372561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372562,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),3751,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36945,counts,um,1.0,verified,4.135570428079463,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372562,,,train,sda-all,samples/GSE313694/GSM9372562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372563,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),11713,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,8.392331364970364,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372563,,,train,sda-all,samples/GSE313694/GSM9372563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372564,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9303,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,8.122254313409469,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372564,,,train,sda-all,samples/GSE313694/GSM9372564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372565,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8458,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,9.798943841105363,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372565,,,train,sda-all,samples/GSE313694/GSM9372565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372566,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5422,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,8.108547110779067,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372566,,,train,sda-all,samples/GSE313694/GSM9372566,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372567,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10195,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,6.191881460301188,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372567,,,train,sda-all,samples/GSE313694/GSM9372567,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9372568,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9062,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,6.5584263079215335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372568,,,train,sda-all,samples/GSE313694/GSM9372568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9372569,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8745,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,6.338722548571736,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372569,,,train,sda-all,samples/GSE313694/GSM9372569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372570,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9589,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,7.868280656388722,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372570,,,train,sda-all,samples/GSE313694/GSM9372570,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372571,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10201,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,10.493769731502555,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),,41663806,,GSM9372571,,,train,sda-all,samples/GSE313694/GSM9372571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372572,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),11314,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,6.743186204194192,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372572,,,train,sda-all,samples/GSE313694/GSM9372572,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372573,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9285,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,6.0862985251214,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372573,,,train,sda-all,samples/GSE313694/GSM9372573,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372574,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),6515,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,6.371688870454235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372574,,,train,sda-all,samples/GSE313694/GSM9372574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372575,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7182,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,5.694822539947798,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372575,,,train,sda-all,samples/GSE313694/GSM9372575,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372576,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8732,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,6.303107836127953,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372576,,,train,sda-all,samples/GSE313694/GSM9372576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372577,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7424,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,8.028026660909045,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372577,,,train,sda-all,samples/GSE313694/GSM9372577,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372578,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5764,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,6.823758084923756,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372578,,,train,sda-all,samples/GSE313694/GSM9372578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372579,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),10651,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,6.660900535296722,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372579,,,train,sda-all,samples/GSE313694/GSM9372579,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9372580,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9868,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,7.535233504341457,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372580,,,train,sda-all,samples/GSE313694/GSM9372580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372581,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7997,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,5.835521862860679,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41663806,,GSM9372581,,,train,sda-all,samples/GSE313694/GSM9372581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372582,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5613,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,5.972742431729292,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),41663806,,GSM9372582,,,train,sda-all,samples/GSE313694/GSM9372582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372583,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7453,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,6.420027149678112,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),41663806,,GSM9372583,,,train,sda-all,samples/GSE313694/GSM9372583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372584,meninges,disease,meningioma,meninx,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7632,Spatial transcriptomic profiling (Visium) of meningioma,GSE313694,GSE313694,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002360,Meningioma,MONDO:0016642,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,8.196898137594966,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),41663806,,GSM9372584,,,train,sda-all,samples/GSE313694/GSM9372584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372711,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,988,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372711,,,train,sda-all,samples/GSE313700/GSM9372711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372712,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1930,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372712,,,train,sda-all,samples/GSE313700/GSM9372712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372713,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1197,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372713,,,train,sda-all,samples/GSE313700/GSM9372713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372714,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,2203,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372714,,,train,sda-all,samples/GSE313700/GSM9372714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372715,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1215,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372715,,,train,sda-all,samples/GSE313700/GSM9372715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372716,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,2131,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372716,,,train,sda-all,samples/GSE313700/GSM9372716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372717,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1922,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372717,,,train,sda-all,samples/GSE313700/GSM9372717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372718,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1222,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372718,,,train,sda-all,samples/GSE313700/GSM9372718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9372719,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1310,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372719,,,train,sda-all,samples/GSE313700/GSM9372719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372720,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1791,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372720,,,train,sda-all,samples/GSE313700/GSM9372720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372721,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1862,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372721,,,train,sda-all,samples/GSE313700/GSM9372721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372722,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,2248,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372722,,,train,sda-all,samples/GSE313700/GSM9372722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372723,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,2084,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372723,,,train,sda-all,samples/GSE313700/GSM9372723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372724,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1662,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372724,,,train,sda-all,samples/GSE313700/GSM9372724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372725,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1602,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372725,,,train,sda-all,samples/GSE313700/GSM9372725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372726,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1720,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372726,,,train,sda-all,samples/GSE313700/GSM9372726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372727,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,740,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372727,,,train,sda-all,samples/GSE313700/GSM9372727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372728,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,799,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372728,,,train,sda-all,samples/GSE313700/GSM9372728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372729,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,801,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372729,,,train,sda-all,samples/GSE313700/GSM9372729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372730,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,708,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372730,,,train,sda-all,samples/GSE313700/GSM9372730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372731,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,823,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372731,,,train,sda-all,samples/GSE313700/GSM9372731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372732,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,861,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372732,,,train,sda-all,samples/GSE313700/GSM9372732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372733,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,817,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372733,,,train,sda-all,samples/GSE313700/GSM9372733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372734,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,871,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372734,,,train,sda-all,samples/GSE313700/GSM9372734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372735,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,968,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372735,,,train,sda-all,samples/GSE313700/GSM9372735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372736,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1012,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372736,,,train,sda-all,samples/GSE313700/GSM9372736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372737,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1011,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372737,,,train,sda-all,samples/GSE313700/GSM9372737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372738,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,968,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372738,,,train,sda-all,samples/GSE313700/GSM9372738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372739,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,979,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372739,,,train,sda-all,samples/GSE313700/GSM9372739,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372740,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1012,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372740,,,train,sda-all,samples/GSE313700/GSM9372740,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372741,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,2012,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372741,,,train,sda-all,samples/GSE313700/GSM9372741,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372742,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1472,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372742,,,train,sda-all,samples/GSE313700/GSM9372742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9372743,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,2998,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372743,,,train,sda-all,samples/GSE313700/GSM9372743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372744,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1113,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372744,,,train,sda-all,samples/GSE313700/GSM9372744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372745,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1995,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372745,,,train,sda-all,samples/GSE313700/GSM9372745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372746,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1058,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372746,,,train,sda-all,samples/GSE313700/GSM9372746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372747,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,2936,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372747,,,train,sda-all,samples/GSE313700/GSM9372747,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372748,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,3188,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372748,,,train,sda-all,samples/GSE313700/GSM9372748,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372749,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,3130,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372749,,,train,sda-all,samples/GSE313700/GSM9372749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372750,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,2594,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Abnormal,Stat1KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372750,,,train,sda-all,samples/GSE313700/GSM9372750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372751,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,891,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372751,,,train,sda-all,samples/GSE313700/GSM9372751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372752,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,897,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372752,,,train,sda-all,samples/GSE313700/GSM9372752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372753,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,901,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372753,,,train,sda-all,samples/GSE313700/GSM9372753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372754,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,888,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372754,,,train,sda-all,samples/GSE313700/GSM9372754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372755,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,994,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372755,,,train,sda-all,samples/GSE313700/GSM9372755,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372756,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,849,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372756,,,train,sda-all,samples/GSE313700/GSM9372756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372757,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1225,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372757,,,train,sda-all,samples/GSE313700/GSM9372757,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372758,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,959,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372758,,,train,sda-all,samples/GSE313700/GSM9372758,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372759,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,901,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372759,,,train,sda-all,samples/GSE313700/GSM9372759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372760,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,892,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [CosMx_Stat1KO],GSE313700,GSE313700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,Normal,Rosa26KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9372760,,,train,sda-all,samples/GSE313700/GSM9372760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372788,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,140698,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],GSE313704,GSE313704,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Untreated,age rule: age with unit,aged,24 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9372788,,,train,sda-all,samples/GSE313704/GSM9372788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372789,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERFISH,False,,73904,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],GSE313704,GSE313704,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Untreated,age rule: age with unit,adult,6 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9372789,,,train,sda-all,samples/GSE313704/GSM9372789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372790,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,163186,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],GSE313704,GSE313704,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Untreated,age rule: age with unit,aged,24 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372790,,,train,sda-all,samples/GSE313704/GSM9372790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372791,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERFISH,False,,177494,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],GSE313704,GSE313704,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Untreated,age rule: age with unit,adult,6 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372791,,,train,sda-all,samples/GSE313704/GSM9372791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372792,liver,disease,liver cancer,liver,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,54197,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],GSE313704,GSE313704,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,MONDO:0002691,mondo_predicate (Luna: perturbation),,AAV+Myc,age rule: age with unit,aged,24 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372792,,,train,sda-all,samples/GSE313704/GSM9372792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9372793,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERFISH,False,,237950,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],GSE313704,GSE313704,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,AAV+mApple,age rule: age with unit,adult,6 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372793,,,train,sda-all,samples/GSE313704/GSM9372793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372794,liver,disease,liver cancer,liver,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERFISH,False,,243863,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],GSE313704,GSE313704,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,MONDO:0002691,mondo_predicate (Luna: perturbation),,AAV+Myc,age rule: age with unit,adult,6 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372794,,,train,sda-all,samples/GSE313704/GSM9372794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372795,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERFISH,False,,105825,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],GSE313704,GSE313704,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,AAV+mApple,age rule: age with unit,adult,6 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372795,,,train,sda-all,samples/GSE313704/GSM9372795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9372796,liver,disease,liver cancer,liver,primary tissue,Mus musculus,house mouse,aged,male,MERFISH/MERSCOPE,MERFISH,False,,114324,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],GSE313704,GSE313704,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,MONDO:0002691,mondo_predicate (Luna: perturbation),,AAV+Myc,age rule: age with unit,aged,24 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9372796,,,train,sda-all,samples/GSE313704/GSM9372796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9372797,liver,disease,liver cancer,liver,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERFISH,False,,141524,Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [MERFISH],GSE313704,GSE313704,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,MONDO:0002691,mondo_predicate (Luna: perturbation),,AAV+Myc,age rule: age with unit,adult,6 months,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,imaging-based,MERFISH,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9372797,,,train,sda-all,samples/GSE313704/GSM9372797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9375928,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,21046,"High resolution mapping of human skin chronic wound tissues biofilm infected using integrated single-cell, spatial and in situ analysis [Xenium]",GSE313808,GSE313808,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,,luna,chronic wound skin,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hmxskin_470g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.4999708624708625,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9375928,,,val,sda-all,samples/GSE313808/GSM9375928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9375929,skin,disease,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,32254,"High resolution mapping of human skin chronic wound tissues biofilm infected using integrated single-cell, spatial and in situ analysis [Xenium]",GSE313808,GSE313808,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,,,luna,chronic wound skin,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hmxskin_470g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.5000349162011173,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9375929,,,val,sda-all,samples/GSE313808/GSM9375929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9376204,skin,disease,melanoma,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),462,Spatial transcriptomics of MRGPRX4-driven melanoma,GSE313828,GSE313828,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,dorsal skin,MONDO:0005105,luna,,tamoxifen,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.101629401668687,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9376204,,,train,sda-all,samples/GSE313828/GSM9376204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.55, ""uberon"": 0.38, ""life_stage"": 1.0}",sample_kind;disease_status;uberon,low_confidence_annotation
GSM9376205,skin,disease,melanoma,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),498,Spatial transcriptomics of MRGPRX4-driven melanoma,GSE313828,GSE313828,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,dorsal skin,MONDO:0005105,luna,,tamoxifen,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.023243905026211,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9376205,,,train,sda-all,samples/GSE313828/GSM9376205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.39, ""uberon"": 0.46, ""life_stage"": 1.0}",sample_kind;disease_status;uberon,low_confidence_annotation
GSM9376206,skin,disease,melanoma,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),386,Spatial transcriptomics of MRGPRX4-driven melanoma,GSE313828,GSE313828,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,dorsal skin,MONDO:0005105,mondo_predicate (Luna: perturbation),,tamoxifen,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9831451106440317,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9376206,,,train,sda-all,samples/GSE313828/GSM9376206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.49, ""disease_status"": 0.35000000000000003, ""uberon"": 0.38, ""life_stage"": 1.0}",sample_kind;disease_status;uberon,low_confidence_annotation
GSM9376740,other,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,7915,Spatial transcriptomic data from longitudinal tumor samples from one patient undergoing neoadjuvant BO-112 and hypofractionated radiation therapy in soft tissue carcoma,GSE313858,GSE313858,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0005070,luna,soft tissue sarcoma,"None (baseline T1, Cohort -2, batch 1)",luna,not stated,,not stated,,GSE313858:Patient 004,Patient 004,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9376740,,,train,hesrt,samples/GSE313858/GSM9376740,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9376741,other,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,13427,Spatial transcriptomic data from longitudinal tumor samples from one patient undergoing neoadjuvant BO-112 and hypofractionated radiation therapy in soft tissue carcoma,GSE313858,GSE313858,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0005070,luna,soft tissue sarcoma,"BO-112 (1 dose) (pre-RT T2, Cohort -2, batch 1)",luna,not stated,,not stated,,GSE313858:Patient 004,Patient 004,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9376741,,,train,hesrt,samples/GSE313858/GSM9376741,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9376742,unknown,disease,neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,17060,Spatial transcriptomic data from longitudinal tumor samples from one patient undergoing neoadjuvant BO-112 and hypofractionated radiation therapy in soft tissue carcoma,GSE313858,GSE313858,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0005070,luna,soft tissue sarcoma,"Radiation (6 Gy x 5), BO-112 (2 doses) (post-RT T3, Cohort -2, batch 1)",luna,not stated,,not stated,,GSE313858:Patient 004,Patient 004,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18085,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9376742,,,train,hesrt,samples/GSE313858/GSM9376742,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9377774,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3767,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,51,extracted field,male,GSE313918:SD013/17,SD013/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.939046960370584,platform_constant,3.939046960370584,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377774,,,test,hesrt,samples/GSE313918/GSM9377774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377775,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3290,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,51,extracted field,male,GSE313918:SD013/17,SD013/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.925613353765105,platform_constant,3.925613353765105,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377775,,,test,hesrt,samples/GSE313918/GSM9377775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377776,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3352,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,51,extracted field,male,GSE313918:SD013/17,SD013/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8876460065730973,platform_constant,3.8876460065730973,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377776,,,test,hesrt,samples/GSE313918/GSM9377776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377777,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3665,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,51,extracted field,male,GSE313918:SD013/17,SD013/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.904023953163207,platform_constant,3.904023953163207,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377777,,,test,hesrt,samples/GSE313918/GSM9377777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377778,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4488,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD016/10,SD016/10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.918254576071747,platform_constant,3.918254576071747,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377778,,,test,hesrt,samples/GSE313918/GSM9377778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377779,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4162,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD016/10,SD016/10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9235095633582238,platform_constant,3.9235095633582238,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377779,,,test,hesrt,samples/GSE313918/GSM9377779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377780,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4490,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD016/10,SD016/10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9291734325264094,platform_constant,3.9291734325264094,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377780,,,test,hesrt,samples/GSE313918/GSM9377780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377781,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3996,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD016/10,SD016/10,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.954497043029661,platform_constant,3.954497043029661,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377781,,,test,hesrt,samples/GSE313918/GSM9377781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377782,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3553,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD014/13,SD014/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9176340646506764,platform_constant,3.9176340646506764,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377782,,,test,hesrt,samples/GSE313918/GSM9377782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377783,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4504,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD014/13,SD014/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.946682190711057,platform_constant,3.946682190711057,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377783,,,test,hesrt,samples/GSE313918/GSM9377783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377784,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4217,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD014/13,SD014/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9480843334604043,platform_constant,3.9480843334604043,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377784,,,test,hesrt,samples/GSE313918/GSM9377784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377785,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4315,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD014/13,SD014/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9134147723990655,platform_constant,3.9134147723990655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377785,,,test,hesrt,samples/GSE313918/GSM9377785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377786,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4239,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD026/12,SD026/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.851657905598814,platform_constant,3.851657905598814,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377786,,,test,hesrt,samples/GSE313918/GSM9377786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377787,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3564,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD026/12,SD026/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8536935581647933,platform_constant,3.8536935581647933,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377787,,,test,hesrt,samples/GSE313918/GSM9377787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377788,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4784,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,66,extracted field,male,GSE313918:SD008/13,SD008/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.86974050435398,platform_constant,3.86974050435398,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377788,,,test,hesrt,samples/GSE313918/GSM9377788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377789,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4908,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,66,extracted field,male,GSE313918:SD008/13,SD008/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8725312469404702,platform_constant,3.8725312469404702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377789,,,test,hesrt,samples/GSE313918/GSM9377789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377790,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4104,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD033/15,SD033/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8709387799914072,platform_constant,3.8709387799914072,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377790,,,test,hesrt,samples/GSE313918/GSM9377790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377791,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3385,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD033/15,SD033/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.833175811459324,platform_constant,3.833175811459324,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377791,,,test,hesrt,samples/GSE313918/GSM9377791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377792,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3553,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,58,extracted field,male,GSE313918:SD032/16,SD032/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8522325254242347,platform_constant,3.8522325254242347,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377792,,,test,hesrt,samples/GSE313918/GSM9377792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377793,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4749,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,58,extracted field,male,GSE313918:SD032/16,SD032/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8174129457578725,platform_constant,3.8174129457578725,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377793,,,test,hesrt,samples/GSE313918/GSM9377793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377794,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4550,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,70,extracted field,male,GSE313918:SD014/16,SD014/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8757290213577575,platform_constant,3.8757290213577575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377794,,,test,hesrt,samples/GSE313918/GSM9377794,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377795,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4151,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,70,extracted field,male,GSE313918:SD014/16,SD014/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8699373307704583,platform_constant,3.8699373307704583,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377795,,,test,hesrt,samples/GSE313918/GSM9377795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377796,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4389,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,male,GSE313918:SD030/18,SD030/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8648717531312435,platform_constant,3.8648717531312435,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377796,,,test,hesrt,samples/GSE313918/GSM9377796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377797,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4550,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,male,GSE313918:SD030/18,SD030/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8661275278778797,platform_constant,3.8661275278778797,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377797,,,test,hesrt,samples/GSE313918/GSM9377797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377798,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3615,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,66,extracted field,female,GSE313918:SD049/15,SD049/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8832818470047825,platform_constant,3.8832818470047825,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377798,,,test,hesrt,samples/GSE313918/GSM9377798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377799,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3854,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,66,extracted field,female,GSE313918:SD049/15,SD049/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8599502455677754,platform_constant,3.8599502455677754,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377799,,,test,hesrt,samples/GSE313918/GSM9377799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377800,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3754,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,48,extracted field,female,GSE313918:SD012/13,SD012/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8690897756532077,platform_constant,3.8690897756532077,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377800,,,test,hesrt,samples/GSE313918/GSM9377800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377801,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3597,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,48,extracted field,female,GSE313918:SD012/13,SD012/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8128343739498427,platform_constant,3.8128343739498427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377801,,,test,hesrt,samples/GSE313918/GSM9377801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377802,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4863,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD032/12,SD032/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8711562131959303,platform_constant,3.8711562131959303,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377802,,,test,hesrt,samples/GSE313918/GSM9377802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377803,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4516,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD032/12,SD032/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.854118062950984,platform_constant,3.854118062950984,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377803,,,test,hesrt,samples/GSE313918/GSM9377803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377804,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4862,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,50,extracted field,female,GSE313918:SD015/16,SD015/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8635971337410595,platform_constant,3.8635971337410595,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377804,,,test,hesrt,samples/GSE313918/GSM9377804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377805,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4829,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,50,extracted field,female,GSE313918:SD015/16,SD015/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8334008022939776,platform_constant,3.8334008022939776,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377805,,,test,hesrt,samples/GSE313918/GSM9377805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377806,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4011,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD004/16,SD004/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8728886463723997,platform_constant,3.8728886463723997,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377806,,,test,hesrt,samples/GSE313918/GSM9377806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377807,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3898,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD004/16,SD004/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.88195546903982,platform_constant,3.88195546903982,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377807,,,test,hesrt,samples/GSE313918/GSM9377807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377808,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4608,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,58,extracted field,female,GSE313918:SD028/12,SD028/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.853260114116427,platform_constant,3.853260114116427,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377808,,,test,hesrt,samples/GSE313918/GSM9377808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377809,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4513,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,58,extracted field,female,GSE313918:SD028/12,SD028/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8630444426336688,platform_constant,3.8630444426336688,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377809,,,test,hesrt,samples/GSE313918/GSM9377809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377810,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4614,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,66,extracted field,male,GSE313918:SD008/13,SD008/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8549588408623396,platform_constant,3.8549588408623396,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377810,,,test,hesrt,samples/GSE313918/GSM9377810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9377811,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4533,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,66,extracted field,male,GSE313918:SD008/13,SD008/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8647268265921846,platform_constant,3.8647268265921846,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377811,,,test,hesrt,samples/GSE313918/GSM9377811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377812,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4238,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD033/15,SD033/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.871460768472568,platform_constant,3.871460768472568,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377812,,,test,hesrt,samples/GSE313918/GSM9377812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377813,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3557,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD033/15,SD033/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8370920473216072,platform_constant,3.8370920473216072,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377813,,,test,hesrt,samples/GSE313918/GSM9377813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377814,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2382,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,48,extracted field,female,GSE313918:SD012/13,SD012/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8746843455864393,platform_constant,3.8746843455864393,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377814,,,test,hesrt,samples/GSE313918/GSM9377814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377815,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3355,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,48,extracted field,female,GSE313918:SD012/13,SD012/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8696624701339912,platform_constant,3.8696624701339912,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377815,,,test,hesrt,samples/GSE313918/GSM9377815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377816,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4524,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,male,GSE313918:SD030/18,SD030/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8483559738571107,platform_constant,3.8483559738571107,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377816,,,test,hesrt,samples/GSE313918/GSM9377816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377817,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4940,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,male,GSE313918:SD030/18,SD030/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.85157870184496,platform_constant,3.85157870184496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377817,,,test,hesrt,samples/GSE313918/GSM9377817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377818,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4215,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,76,extracted field,female,GSE313918:SD047/13,SD047/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8900884468687726,platform_constant,3.8900884468687726,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377818,,,test,hesrt,samples/GSE313918/GSM9377818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377819,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3995,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,76,extracted field,female,GSE313918:SD047/13,SD047/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8896245322393868,platform_constant,3.8896245322393868,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377819,,,test,hesrt,samples/GSE313918/GSM9377819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377820,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4906,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,50,extracted field,female,GSE313918:SD015/16,SD015/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9255384147071926,platform_constant,3.9255384147071926,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377820,,,test,hesrt,samples/GSE313918/GSM9377820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377821,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3715,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,50,extracted field,female,GSE313918:SD015/16,SD015/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.868594905528229,platform_constant,3.868594905528229,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377821,,,test,hesrt,samples/GSE313918/GSM9377821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377822,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4822,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD006/17,SD006/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8852786985418004,platform_constant,3.8852786985418004,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377822,,,test,hesrt,samples/GSE313918/GSM9377822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377823,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4889,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD006/17,SD006/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.850546769472652,platform_constant,3.850546769472652,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377823,,,test,hesrt,samples/GSE313918/GSM9377823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377824,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4682,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,66,extracted field,male,GSE313918:SD008/13,SD008/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8630288823161,platform_constant,3.8630288823161,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377824,,,test,hesrt,samples/GSE313918/GSM9377824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9377825,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4248,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD033/15,SD033/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.846960759072081,platform_constant,3.846960759072081,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377825,,,test,hesrt,samples/GSE313918/GSM9377825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377826,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4173,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD033/15,SD033/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.851718070741293,platform_constant,3.851718070741293,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377826,,,test,hesrt,samples/GSE313918/GSM9377826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377827,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4751,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,58,extracted field,male,GSE313918:SD032/16,SD032/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8369691859066846,platform_constant,3.8369691859066846,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377827,,,test,hesrt,samples/GSE313918/GSM9377827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377828,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4777,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,58,extracted field,male,GSE313918:SD032/16,SD032/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.850044948332677,platform_constant,3.850044948332677,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377828,,,test,hesrt,samples/GSE313918/GSM9377828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377829,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4143,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,70,extracted field,male,GSE313918:SD014/16,SD014/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8545683164236975,platform_constant,3.8545683164236975,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377829,,,test,hesrt,samples/GSE313918/GSM9377829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377830,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4477,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,70,extracted field,male,GSE313918:SD014/16,SD014/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.845694624182645,platform_constant,3.845694624182645,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377830,,,test,hesrt,samples/GSE313918/GSM9377830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377831,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4526,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,male,GSE313918:SD030/18,SD030/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8488675652538022,platform_constant,3.8488675652538022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377831,,,test,hesrt,samples/GSE313918/GSM9377831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377832,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4784,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,male,GSE313918:SD030/18,SD030/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.832905012357335,platform_constant,3.832905012357335,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377832,,,test,hesrt,samples/GSE313918/GSM9377832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377833,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3441,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,66,extracted field,female,GSE313918:SD049/15,SD049/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8934098387216074,platform_constant,3.8934098387216074,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377833,,,test,hesrt,samples/GSE313918/GSM9377833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377834,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3306,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,66,extracted field,female,GSE313918:SD049/15,SD049/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.872144455374275,platform_constant,3.872144455374275,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377834,,,test,hesrt,samples/GSE313918/GSM9377834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377835,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4176,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,48,extracted field,female,GSE313918:SD012/13,SD012/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8796727012663355,platform_constant,3.8796727012663355,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377835,,,test,hesrt,samples/GSE313918/GSM9377835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377836,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4412,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,48,extracted field,female,GSE313918:SD012/13,SD012/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9124771374071354,platform_constant,3.9124771374071354,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377836,,,test,hesrt,samples/GSE313918/GSM9377836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377837,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4607,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD032/12,SD032/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8662136690075326,platform_constant,3.8662136690075326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377837,,,test,hesrt,samples/GSE313918/GSM9377837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377838,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4581,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD032/12,SD032/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.883896049961605,platform_constant,3.883896049961605,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377838,,,test,hesrt,samples/GSE313918/GSM9377838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377839,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4909,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,50,extracted field,female,GSE313918:SD015/16,SD015/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8660290877746712,platform_constant,3.8660290877746712,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377839,,,test,hesrt,samples/GSE313918/GSM9377839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377840,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4774,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,50,extracted field,female,GSE313918:SD015/16,SD015/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.86687668169045,platform_constant,3.86687668169045,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377840,,,test,hesrt,samples/GSE313918/GSM9377840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377841,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4085,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD004/16,SD004/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8608129304370618,platform_constant,3.8608129304370618,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377841,,,test,hesrt,samples/GSE313918/GSM9377841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377842,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3263,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD004/16,SD004/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8562494554094076,platform_constant,3.8562494554094076,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377842,,,test,hesrt,samples/GSE313918/GSM9377842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377843,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4062,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,58,extracted field,female,GSE313918:SD028/12,SD028/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.854341178949003,platform_constant,3.854341178949003,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377843,,,test,hesrt,samples/GSE313918/GSM9377843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377844,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4988,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,58,extracted field,female,GSE313918:SD028/12,SD028/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.877974743720206,platform_constant,3.877974743720206,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377844,,,test,hesrt,samples/GSE313918/GSM9377844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377845,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2571,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,66,extracted field,male,GSE313918:SD008/13,SD008/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.872950780521547,platform_constant,3.872950780521547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377845,,,test,hesrt,samples/GSE313918/GSM9377845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377846,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3705,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,66,extracted field,male,GSE313918:SD008/13,SD008/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8603541506074115,platform_constant,3.8603541506074115,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377846,,,test,hesrt,samples/GSE313918/GSM9377846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377847,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4598,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD033/15,SD033/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.855167439768347,platform_constant,3.855167439768347,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377847,,,test,hesrt,samples/GSE313918/GSM9377847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377848,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4532,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD033/15,SD033/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8560121572025037,platform_constant,3.8560121572025037,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377848,,,test,hesrt,samples/GSE313918/GSM9377848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377849,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3583,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,58,extracted field,male,GSE313918:SD032/16,SD032/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.856840619937172,platform_constant,3.856840619937172,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377849,,,test,hesrt,samples/GSE313918/GSM9377849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377850,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3507,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,58,extracted field,male,GSE313918:SD032/16,SD032/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.864762328050569,platform_constant,3.864762328050569,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377850,,,test,hesrt,samples/GSE313918/GSM9377850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377851,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3134,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,48,extracted field,female,GSE313918:SD012/13,SD012/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8568974167488403,platform_constant,3.8568974167488403,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377851,,,test,hesrt,samples/GSE313918/GSM9377851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377852,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3189,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,48,extracted field,female,GSE313918:SD012/13,SD012/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.872138738716417,platform_constant,3.872138738716417,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377852,,,test,hesrt,samples/GSE313918/GSM9377852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377853,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4931,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,male,GSE313918:SD030/18,SD030/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.850450717264517,platform_constant,3.850450717264517,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377853,,,test,hesrt,samples/GSE313918/GSM9377853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377854,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4299,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,63,extracted field,male,GSE313918:SD030/18,SD030/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.838408716194233,platform_constant,3.838408716194233,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377854,,,test,hesrt,samples/GSE313918/GSM9377854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377855,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3627,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,76,extracted field,female,GSE313918:SD047/13,SD047/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8634710671506247,platform_constant,3.8634710671506247,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377855,,,test,hesrt,samples/GSE313918/GSM9377855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377856,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3065,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,70,extracted field,male,GSE313918:SD014/16,SD014/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.859243372928389,platform_constant,3.859243372928389,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377856,,,test,hesrt,samples/GSE313918/GSM9377856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377857,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4260,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,70,extracted field,male,GSE313918:SD014/16,SD014/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.853591057178849,platform_constant,3.853591057178849,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377857,,,test,hesrt,samples/GSE313918/GSM9377857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377858,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3841,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,50,extracted field,female,GSE313918:SD015/16,SD015/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.845456521314276,platform_constant,3.845456521314276,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377858,,,test,hesrt,samples/GSE313918/GSM9377858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377859,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4378,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,71,extracted field,male,GSE313918:SD024/18,SD024/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8495362351415636,platform_constant,3.8495362351415636,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377859,,,test,hesrt,samples/GSE313918/GSM9377859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377860,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4649,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,71,extracted field,male,GSE313918:SD024/18,SD024/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8502316009242947,platform_constant,3.8502316009242947,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377860,,,test,hesrt,samples/GSE313918/GSM9377860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377861,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3794,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,71,extracted field,male,GSE313918:SD024/18,SD024/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8423441272769363,platform_constant,3.8423441272769363,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377861,,,test,hesrt,samples/GSE313918/GSM9377861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377862,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3601,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,71,extracted field,male,GSE313918:SD024/18,SD024/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.85433930820267,platform_constant,3.85433930820267,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377862,,,test,hesrt,samples/GSE313918/GSM9377862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377863,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4832,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,62,extracted field,male,GSE313918:SD027/14,SD027/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.829544378602588,platform_constant,3.829544378602588,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377863,,,test,hesrt,samples/GSE313918/GSM9377863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377864,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3655,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,62,extracted field,male,GSE313918:SD027/14,SD027/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.84302037768617,platform_constant,3.84302037768617,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377864,,,test,hesrt,samples/GSE313918/GSM9377864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377865,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4910,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,82,extracted field,male,GSE313918:SD030/19,SD030/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.839759391701174,platform_constant,3.839759391701174,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377865,,,test,hesrt,samples/GSE313918/GSM9377865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377866,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4929,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,82,extracted field,male,GSE313918:SD030/19,SD030/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8417752491709654,platform_constant,3.8417752491709654,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377866,,,test,hesrt,samples/GSE313918/GSM9377866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377867,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4566,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,62,extracted field,male,GSE313918:SD027/14,SD027/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8140205129578475,platform_constant,3.8140205129578475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377867,,,test,hesrt,samples/GSE313918/GSM9377867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377868,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3328,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,62,extracted field,male,GSE313918:SD027/14,SD027/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.802257473915326,platform_constant,3.802257473915326,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377868,,,test,hesrt,samples/GSE313918/GSM9377868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377869,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4759,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,82,extracted field,male,GSE313918:SD030/19,SD030/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8236996005548827,platform_constant,3.8236996005548827,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377869,,,test,hesrt,samples/GSE313918/GSM9377869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377870,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4081,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,55,extracted field,male,GSE313918:SD034/19,SD034/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9525648421814816,platform_constant,3.9525648421814816,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377870,,,test,hesrt,samples/GSE313918/GSM9377870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377871,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4979,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,55,extracted field,male,GSE313918:SD034/19,SD034/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9481300417716754,platform_constant,3.9481300417716754,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377871,,,test,hesrt,samples/GSE313918/GSM9377871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377872,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4984,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,55,extracted field,male,GSE313918:SD034/19,SD034/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.947688900663155,platform_constant,3.947688900663155,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377872,,,test,hesrt,samples/GSE313918/GSM9377872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377873,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4867,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,adult,55,extracted field,male,GSE313918:SD034/19,SD034/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9185469500523453,platform_constant,3.9185469500523453,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377873,,,test,hesrt,samples/GSE313918/GSM9377873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377874,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4510,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD006/13,SD006/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8519419795526577,platform_constant,3.8519419795526577,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377874,,,test,hesrt,samples/GSE313918/GSM9377874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377875,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4950,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,female,GSE313918:SD010/18,SD010/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.846337779711802,platform_constant,3.846337779711802,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377875,,,test,hesrt,samples/GSE313918/GSM9377875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377876,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4992,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,female,GSE313918:SD010/18,SD010/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8608654879049022,platform_constant,3.8608654879049022,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377876,,,test,hesrt,samples/GSE313918/GSM9377876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377877,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4647,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD006/13,SD006/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.855225790638686,platform_constant,3.855225790638686,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377877,,,test,hesrt,samples/GSE313918/GSM9377877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377878,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4948,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,female,GSE313918:SD010/18,SD010/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8447045950683,platform_constant,3.8447045950683,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377878,,,test,hesrt,samples/GSE313918/GSM9377878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377879,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4986,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,female,GSE313918:SD010/18,SD010/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.858466407850609,platform_constant,3.858466407850609,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377879,,,test,hesrt,samples/GSE313918/GSM9377879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377880,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4133,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD026/12,SD026/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.862575980265974,platform_constant,3.862575980265974,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377880,,,test,hesrt,samples/GSE313918/GSM9377880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377881,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4520,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD026/12,SD026/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8415558809815655,platform_constant,3.8415558809815655,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377881,,,test,hesrt,samples/GSE313918/GSM9377881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377882,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4158,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,76,extracted field,female,GSE313918:SD047/13,SD047/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8387788626835997,platform_constant,3.8387788626835997,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377882,,,test,hesrt,samples/GSE313918/GSM9377882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377883,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4601,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,76,extracted field,female,GSE313918:SD047/13,SD047/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.852024443329089,platform_constant,3.852024443329089,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377883,,,test,hesrt,samples/GSE313918/GSM9377883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377884,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4755,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,50,extracted field,male,GSE313918:SD014/14,SD014/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8478371650540524,platform_constant,3.8478371650540524,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377884,,,test,hesrt,samples/GSE313918/GSM9377884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377885,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4411,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD026/12,SD026/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8738314161043244,platform_constant,3.8738314161043244,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377885,,,test,hesrt,samples/GSE313918/GSM9377885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377886,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4288,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD006/13,SD006/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.851183770957679,platform_constant,3.851183770957679,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377886,,,test,hesrt,samples/GSE313918/GSM9377886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377887,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4268,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD006/13,SD006/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8528138062034785,platform_constant,3.8528138062034785,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377887,,,test,hesrt,samples/GSE313918/GSM9377887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377888,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4636,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD026/12,SD026/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.883805126537965,platform_constant,3.883805126537965,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377888,,,test,hesrt,samples/GSE313918/GSM9377888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377889,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4487,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,50,extracted field,male,GSE313918:SD014/14,SD014/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.869651391526983,platform_constant,3.869651391526983,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377889,,,test,hesrt,samples/GSE313918/GSM9377889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377890,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4519,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,50,extracted field,male,GSE313918:SD014/14,SD014/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.85516332197855,platform_constant,3.85516332197855,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377890,,,test,hesrt,samples/GSE313918/GSM9377890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377891,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3689,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD004/16,SD004/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9250575046617375,platform_constant,3.9250575046617375,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377891,,,test,hesrt,samples/GSE313918/GSM9377891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377892,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4533,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD004/16,SD004/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.876852358998886,platform_constant,3.876852358998886,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377892,,,test,hesrt,samples/GSE313918/GSM9377892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377893,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4320,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,59,extracted field,female,GSE313918:SD029/15,SD029/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9425869144657923,platform_constant,3.9425869144657923,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377893,,,test,hesrt,samples/GSE313918/GSM9377893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377894,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3249,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,59,extracted field,female,GSE313918:SD029/15,SD029/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.931957201276503,platform_constant,3.931957201276503,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377894,,,test,hesrt,samples/GSE313918/GSM9377894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377895,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4724,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,59,extracted field,female,GSE313918:SD029/15,SD029/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9097718433094983,platform_constant,3.9097718433094983,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377895,,,test,hesrt,samples/GSE313918/GSM9377895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377896,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4211,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,59,extracted field,female,GSE313918:SD029/15,SD029/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9056935762805978,platform_constant,3.9056935762805978,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377896,,,test,hesrt,samples/GSE313918/GSM9377896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377897,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4101,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,71,extracted field,male,GSE313918:SD024/18,SD024/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.934287708206387,platform_constant,3.934287708206387,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377897,,,test,hesrt,samples/GSE313918/GSM9377897,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377898,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4419,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,50,extracted field,male,GSE313918:SD003/17,SD003/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.928747894492602,platform_constant,3.928747894492602,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377898,,,test,hesrt,samples/GSE313918/GSM9377898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377899,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4291,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,50,extracted field,male,GSE313918:SD003/17,SD003/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9108850932348647,platform_constant,3.9108850932348647,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377899,,,test,hesrt,samples/GSE313918/GSM9377899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377900,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3980,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD006/17,SD006/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.907867475769073,platform_constant,3.907867475769073,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377900,,,test,hesrt,samples/GSE313918/GSM9377900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377901,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3925,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD006/17,SD006/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9028714126737034,platform_constant,3.9028714126737034,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377901,,,test,hesrt,samples/GSE313918/GSM9377901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377902,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4488,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,50,extracted field,male,GSE313918:SD003/17,SD003/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.926769832329407,platform_constant,3.926769832329407,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377902,,,test,hesrt,samples/GSE313918/GSM9377902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377903,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4875,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,50,extracted field,male,GSE313918:SD003/17,SD003/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9023238327508936,platform_constant,3.9023238327508936,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377903,,,test,hesrt,samples/GSE313918/GSM9377903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377904,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4417,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD006/17,SD006/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9241530814965015,platform_constant,3.9241530814965015,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377904,,,test,hesrt,samples/GSE313918/GSM9377904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377905,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3937,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD006/17,SD006/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.912028922077396,platform_constant,3.912028922077396,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377905,,,test,hesrt,samples/GSE313918/GSM9377905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377906,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4741,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,67,extracted field,female,GSE313918:SD002/16,SD002/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9390252180866367,platform_constant,3.9390252180866367,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377906,,,test,hesrt,samples/GSE313918/GSM9377906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377907,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3935,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,67,extracted field,female,GSE313918:SD002/16,SD002/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9063423563676567,platform_constant,3.9063423563676567,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377907,,,test,hesrt,samples/GSE313918/GSM9377907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377908,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4190,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,67,extracted field,female,GSE313918:SD002/16,SD002/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8992176154747447,platform_constant,3.8992176154747447,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377908,,,test,hesrt,samples/GSE313918/GSM9377908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377909,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4112,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD050/19,SD050/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.909119269041063,platform_constant,3.909119269041063,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377909,,,test,hesrt,samples/GSE313918/GSM9377909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377910,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4531,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD050/19,SD050/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.923059131769598,platform_constant,3.923059131769598,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377910,,,test,hesrt,samples/GSE313918/GSM9377910,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377911,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4860,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,82,extracted field,male,GSE313918:SD030/19,SD030/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9341711289268066,platform_constant,3.9341711289268066,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377911,,,test,hesrt,samples/GSE313918/GSM9377911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377912,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4966,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,82,extracted field,male,GSE313918:SD030/19,SD030/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9152376627722507,platform_constant,3.9152376627722507,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377912,,,test,hesrt,samples/GSE313918/GSM9377912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377913,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3571,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD050/19,SD050/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.929312231354919,platform_constant,3.929312231354919,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377913,,,test,hesrt,samples/GSE313918/GSM9377913,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377914,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4574,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD050/19,SD050/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.922018052143964,platform_constant,3.922018052143964,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377914,,,test,hesrt,samples/GSE313918/GSM9377914,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377915,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4709,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,82,extracted field,male,GSE313918:SD030/19,SD030/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9225024777520234,platform_constant,3.9225024777520234,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377915,,,test,hesrt,samples/GSE313918/GSM9377915,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377916,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4807,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,82,extracted field,male,GSE313918:SD030/19,SD030/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.903750211232817,platform_constant,3.903750211232817,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377916,,,test,hesrt,samples/GSE313918/GSM9377916,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377917,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4359,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,83,extracted field,female,GSE313918:SD045/15,SD045/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9221742218453928,platform_constant,3.9221742218453928,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377917,,,test,hesrt,samples/GSE313918/GSM9377917,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377918,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4671,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,83,extracted field,female,GSE313918:SD045/15,SD045/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.910507264277775,platform_constant,3.910507264277775,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377918,,,test,hesrt,samples/GSE313918/GSM9377918,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377919,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4987,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,83,extracted field,female,GSE313918:SD045/15,SD045/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.950857825131771,platform_constant,3.950857825131771,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377919,,,test,hesrt,samples/GSE313918/GSM9377919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377920,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3781,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,83,extracted field,female,GSE313918:SD045/15,SD045/15,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.932082944637424,platform_constant,3.932082944637424,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377920,,,test,hesrt,samples/GSE313918/GSM9377920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377921,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4843,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,67,extracted field,female,GSE313918:SD002/16,SD002/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.915617402539615,platform_constant,3.915617402539615,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377921,,,test,hesrt,samples/GSE313918/GSM9377921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377922,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3683,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,67,extracted field,female,GSE313918:SD002/16,SD002/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9434511715770757,platform_constant,3.9434511715770757,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377922,,,test,hesrt,samples/GSE313918/GSM9377922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377923,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3223,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD004/16,SD004/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.912278825908097,platform_constant,3.912278825908097,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377923,,,test,hesrt,samples/GSE313918/GSM9377923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377924,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4441,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD004/16,SD004/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.918956808024728,platform_constant,3.918956808024728,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377924,,,test,hesrt,samples/GSE313918/GSM9377924,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377925,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4641,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,63,extracted field,female,GSE313918:SD004/16,SD004/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9476583649641235,platform_constant,3.9476583649641235,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377925,,,test,hesrt,samples/GSE313918/GSM9377925,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377926,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4992,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,67,extracted field,female,GSE313918:SD002/16,SD002/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.895568159140689,platform_constant,3.895568159140689,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377926,,,test,hesrt,samples/GSE313918/GSM9377926,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377927,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4880,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,67,extracted field,female,GSE313918:SD002/16,SD002/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9691030106994463,platform_constant,3.9691030106994463,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377927,,,test,hesrt,samples/GSE313918/GSM9377927,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377928,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4440,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,71,extracted field,male,GSE313918:SD024/18,SD024/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9743019554348282,platform_constant,3.9743019554348282,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377928,,,test,hesrt,samples/GSE313918/GSM9377928,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377929,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4287,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,71,extracted field,male,GSE313918:SD024/18,SD024/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.96229673123204,platform_constant,3.96229673123204,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377929,,,test,hesrt,samples/GSE313918/GSM9377929,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377930,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3603,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,70,extracted field,male,GSE313918:SD014/16,SD014/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.960693671351824,platform_constant,3.960693671351824,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377930,,,test,hesrt,samples/GSE313918/GSM9377930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377931,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3712,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,70,extracted field,male,GSE313918:SD014/16,SD014/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.943723935161945,platform_constant,3.943723935161945,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377931,,,test,hesrt,samples/GSE313918/GSM9377931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377932,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4042,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,67,extracted field,female,GSE313918:SD002/16,SD002/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9138114762072456,platform_constant,3.9138114762072456,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377932,,,test,hesrt,samples/GSE313918/GSM9377932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377933,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4090,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,67,extracted field,female,GSE313918:SD002/16,SD002/16,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.938709248027337,platform_constant,3.938709248027337,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377933,,,test,hesrt,samples/GSE313918/GSM9377933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377934,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4017,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD026/12,SD026/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.909846910538496,platform_constant,3.909846910538496,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377934,,,test,hesrt,samples/GSE313918/GSM9377934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377935,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3418,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,57,extracted field,male,GSE313918:SD026/12,SD026/12,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.903256959986892,platform_constant,3.903256959986892,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377935,,,test,hesrt,samples/GSE313918/GSM9377935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377936,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4645,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD006/17,SD006/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9545538225747188,platform_constant,3.9545538225747188,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377936,,,test,hesrt,samples/GSE313918/GSM9377936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377937,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4272,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD006/17,SD006/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9173739197574697,platform_constant,3.9173739197574697,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377937,,,test,hesrt,samples/GSE313918/GSM9377937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377938,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4038,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD014/13,SD014/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8941678918226224,platform_constant,3.8941678918226224,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377938,,,test,hesrt,samples/GSE313918/GSM9377938,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377939,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4730,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD014/13,SD014/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.882072300734937,platform_constant,3.882072300734937,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377939,,,test,hesrt,samples/GSE313918/GSM9377939,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377940,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4788,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,71,extracted field,female,GSE313918:SD012/17,SD012/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8971658822833026,platform_constant,3.8971658822833026,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377940,,,test,hesrt,samples/GSE313918/GSM9377940,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377941,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4589,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,71,extracted field,female,GSE313918:SD012/17,SD012/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8803792606030054,platform_constant,3.8803792606030054,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377941,,,test,hesrt,samples/GSE313918/GSM9377941,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377942,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4277,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD014/13,SD014/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.876764813864023,platform_constant,3.876764813864023,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377942,,,test,hesrt,samples/GSE313918/GSM9377942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377943,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4778,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD014/13,SD014/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8761511439884706,platform_constant,3.8761511439884706,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377943,,,test,hesrt,samples/GSE313918/GSM9377943,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377944,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4029,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,71,extracted field,female,GSE313918:SD012/17,SD012/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.899703017248089,platform_constant,3.899703017248089,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377944,,,test,hesrt,samples/GSE313918/GSM9377944,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377945,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4645,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,71,extracted field,female,GSE313918:SD012/17,SD012/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.887267032813218,platform_constant,3.887267032813218,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377945,,,test,hesrt,samples/GSE313918/GSM9377945,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377946,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4396,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD014/13,SD014/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9147319893803005,platform_constant,3.9147319893803005,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377946,,,test,hesrt,samples/GSE313918/GSM9377946,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377947,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3800,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD014/13,SD014/13,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8798231346989724,platform_constant,3.8798231346989724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377947,,,test,hesrt,samples/GSE313918/GSM9377947,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377948,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4510,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,71,extracted field,female,GSE313918:SD012/17,SD012/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9061956598518495,platform_constant,3.9061956598518495,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377948,,,test,hesrt,samples/GSE313918/GSM9377948,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377949,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4887,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,71,extracted field,female,GSE313918:SD012/17,SD012/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.904281014711138,platform_constant,3.904281014711138,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377949,,,test,hesrt,samples/GSE313918/GSM9377949,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377950,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3986,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,62,extracted field,male,GSE313918:SD027/14,SD027/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.906777422131101,platform_constant,3.906777422131101,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377950,,,test,hesrt,samples/GSE313918/GSM9377950,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377951,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3962,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,62,extracted field,male,GSE313918:SD027/14,SD027/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8765101256389074,platform_constant,3.8765101256389074,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377951,,,test,hesrt,samples/GSE313918/GSM9377951,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377952,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4055,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,62,extracted field,male,GSE313918:SD027/14,SD027/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.90487320418915,platform_constant,3.90487320418915,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377952,,,test,hesrt,samples/GSE313918/GSM9377952,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377953,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3476,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,62,extracted field,male,GSE313918:SD027/14,SD027/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.909926436766753,platform_constant,3.909926436766753,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377953,,,test,hesrt,samples/GSE313918/GSM9377953,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377954,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4508,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,65,extracted field,female,GSE313918:SD046/17,SD046/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9317946379610356,platform_constant,3.9317946379610356,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377954,,,test,hesrt,samples/GSE313918/GSM9377954,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377955,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4188,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,65,extracted field,female,GSE313918:SD046/17,SD046/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.895236087079976,platform_constant,3.895236087079976,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377955,,,test,hesrt,samples/GSE313918/GSM9377955,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377956,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4458,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,65,extracted field,female,GSE313918:SD046/17,SD046/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9270319436968624,platform_constant,3.9270319436968624,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377956,,,test,hesrt,samples/GSE313918/GSM9377956,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377957,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4096,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,65,extracted field,female,GSE313918:SD046/17,SD046/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.947164313921474,platform_constant,3.947164313921474,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377957,,,test,hesrt,samples/GSE313918/GSM9377957,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377958,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3667,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,46,extracted field,female,GSE313918:SD014/18,SD014/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.888943461138134,platform_constant,3.888943461138134,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377958,,,test,hesrt,samples/GSE313918/GSM9377958,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377959,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4855,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,46,extracted field,female,GSE313918:SD014/18,SD014/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.914795769342859,platform_constant,3.914795769342859,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377959,,,test,hesrt,samples/GSE313918/GSM9377959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377960,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3432,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,59,extracted field,female,GSE313918:SD035/14,SD035/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8891674745407094,platform_constant,3.8891674745407094,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377960,,,test,hesrt,samples/GSE313918/GSM9377960,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377961,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3370,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,59,extracted field,female,GSE313918:SD035/14,SD035/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.912690164033702,platform_constant,3.912690164033702,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377961,,,test,hesrt,samples/GSE313918/GSM9377961,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377962,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4880,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,46,extracted field,female,GSE313918:SD014/18,SD014/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.887529962799256,platform_constant,3.887529962799256,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377962,,,test,hesrt,samples/GSE313918/GSM9377962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377963,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4782,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,46,extracted field,female,GSE313918:SD014/18,SD014/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9286424967031572,platform_constant,3.9286424967031572,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377963,,,test,hesrt,samples/GSE313918/GSM9377963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377964,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3621,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,59,extracted field,female,GSE313918:SD035/14,SD035/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.89530433828524,platform_constant,3.89530433828524,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377964,,,test,hesrt,samples/GSE313918/GSM9377964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377965,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3216,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,59,extracted field,female,GSE313918:SD035/14,SD035/14,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9092829365848405,platform_constant,3.9092829365848405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377965,,,test,hesrt,samples/GSE313918/GSM9377965,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377966,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4500,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,40,extracted field,male,GSE313918:SD006/21,SD006/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8909533076294243,platform_constant,3.8909533076294243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377966,,,test,hesrt,samples/GSE313918/GSM9377966,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377967,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4123,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,40,extracted field,male,GSE313918:SD006/21,SD006/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8814588900578317,platform_constant,3.8814588900578317,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377967,,,test,hesrt,samples/GSE313918/GSM9377967,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377968,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4448,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,53,extracted field,female,GSE313918:SD028/18,SD028/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8749829479098565,platform_constant,3.8749829479098565,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377968,,,test,hesrt,samples/GSE313918/GSM9377968,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377969,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4515,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,40,extracted field,male,GSE313918:SD006/21,SD006/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.904228057213383,platform_constant,3.904228057213383,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377969,,,test,hesrt,samples/GSE313918/GSM9377969,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377970,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3680,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,adult,40,extracted field,male,GSE313918:SD006/21,SD006/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8989749174424677,platform_constant,3.8989749174424677,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377970,,,test,hesrt,samples/GSE313918/GSM9377970,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377971,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4563,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,53,extracted field,female,GSE313918:SD028/18,SD028/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.912061216908461,platform_constant,3.912061216908461,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377971,,,test,hesrt,samples/GSE313918/GSM9377971,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377972,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4544,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,53,extracted field,female,GSE313918:SD028/18,SD028/18,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9079935322694803,platform_constant,3.9079935322694803,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377972,,,test,hesrt,samples/GSE313918/GSM9377972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377973,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4628,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD022/21,SD022/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8989088775725342,platform_constant,3.8989088775725342,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377973,,,test,hesrt,samples/GSE313918/GSM9377973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377974,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3828,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD022/21,SD022/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8839330892013475,platform_constant,3.8839330892013475,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377974,,,test,hesrt,samples/GSE313918/GSM9377974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377975,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3624,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD022/21,SD022/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9085933826370676,platform_constant,3.9085933826370676,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377975,,,test,hesrt,samples/GSE313918/GSM9377975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377976,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4243,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD022/21,SD022/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.908289267566987,platform_constant,3.908289267566987,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377976,,,test,hesrt,samples/GSE313918/GSM9377976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377977,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4018,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD022/21,SD022/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.934298759275123,platform_constant,3.934298759275123,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377977,,,test,hesrt,samples/GSE313918/GSM9377977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377978,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3178,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD022/21,SD022/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9298169535614487,platform_constant,3.9298169535614487,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377978,,,test,hesrt,samples/GSE313918/GSM9377978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377979,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3608,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD022/21,SD022/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9294408508902,platform_constant,3.9294408508902,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377979,,,test,hesrt,samples/GSE313918/GSM9377979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377980,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3341,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD022/21,SD022/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9249671030277953,platform_constant,3.9249671030277953,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377980,,,test,hesrt,samples/GSE313918/GSM9377980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377981,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4874,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,male,GSE313918:SD026/21,SD026/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.852208338027473,platform_constant,3.852208338027473,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377981,,,test,hesrt,samples/GSE313918/GSM9377981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377982,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4598,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,male,GSE313918:SD026/21,SD026/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8522358001785038,platform_constant,3.8522358001785038,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377982,,,test,hesrt,samples/GSE313918/GSM9377982,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377983,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3913,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,male,GSE313918:SD026/21,SD026/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8592607426908514,platform_constant,3.8592607426908514,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377983,,,test,hesrt,samples/GSE313918/GSM9377983,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377984,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3963,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,male,GSE313918:SD026/21,SD026/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8691455545615727,platform_constant,3.8691455545615727,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377984,,,test,hesrt,samples/GSE313918/GSM9377984,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377985,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4983,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,male,GSE313918:SD026/21,SD026/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8708694043325287,platform_constant,3.8708694043325287,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377985,,,test,hesrt,samples/GSE313918/GSM9377985,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377986,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4967,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,male,GSE313918:SD026/21,SD026/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.862850436898979,platform_constant,3.862850436898979,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377986,,,test,hesrt,samples/GSE313918/GSM9377986,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377987,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4690,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,male,GSE313918:SD026/21,SD026/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.850416873046143,platform_constant,3.850416873046143,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377987,,,test,hesrt,samples/GSE313918/GSM9377987,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377988,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4472,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,81,extracted field,male,GSE313918:SD026/21,SD026/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.875785777085229,platform_constant,3.875785777085229,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377988,,,test,hesrt,samples/GSE313918/GSM9377988,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377989,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3353,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,65,extracted field,female,GSE313918:SD048/21,SD048/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8856112973083934,platform_constant,3.8856112973083934,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377989,,,test,hesrt,samples/GSE313918/GSM9377989,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377990,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3572,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,65,extracted field,female,GSE313918:SD048/21,SD048/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.870032246327292,platform_constant,3.870032246327292,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377990,,,test,hesrt,samples/GSE313918/GSM9377990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377991,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4796,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,53,extracted field,female,GSE313918:SD045/21,SD045/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8612914006625942,platform_constant,3.8612914006625942,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377991,,,test,hesrt,samples/GSE313918/GSM9377991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377992,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4583,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,53,extracted field,female,GSE313918:SD045/21,SD045/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8671164849937663,platform_constant,3.8671164849937663,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377992,,,test,hesrt,samples/GSE313918/GSM9377992,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377993,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2751,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,65,extracted field,female,GSE313918:SD048/21,SD048/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8734706512417323,platform_constant,3.8734706512417323,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377993,,,test,hesrt,samples/GSE313918/GSM9377993,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377994,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3383,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,aged,65,extracted field,female,GSE313918:SD048/21,SD048/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.88378690514017,platform_constant,3.88378690514017,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377994,,,test,hesrt,samples/GSE313918/GSM9377994,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377995,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4967,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,53,extracted field,female,GSE313918:SD045/21,SD045/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8947233273606088,platform_constant,3.8947233273606088,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377995,,,test,hesrt,samples/GSE313918/GSM9377995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377996,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4992,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,53,extracted field,female,GSE313918:SD045/21,SD045/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.902291735601221,platform_constant,3.902291735601221,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377996,,,test,hesrt,samples/GSE313918/GSM9377996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377997,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4218,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,51,extracted field,female,GSE313918:SD015/22,SD015/22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.915754906717252,platform_constant,3.915754906717252,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377997,,,test,hesrt,samples/GSE313918/GSM9377997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377998,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4433,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,51,extracted field,female,GSE313918:SD015/22,SD015/22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9256488697608405,platform_constant,3.9256488697608405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377998,,,test,hesrt,samples/GSE313918/GSM9377998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9377999,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4819,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,52,extracted field,female,GSE313918:SD053/21,SD053/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.921552396919561,platform_constant,3.921552396919561,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9377999,,,test,hesrt,samples/GSE313918/GSM9377999,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378000,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4031,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,52,extracted field,female,GSE313918:SD053/21,SD053/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9073995238900325,platform_constant,3.9073995238900325,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378000,,,test,hesrt,samples/GSE313918/GSM9378000,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378001,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4654,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,51,extracted field,female,GSE313918:SD015/22,SD015/22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9013183811468792,platform_constant,3.9013183811468792,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378001,,,test,hesrt,samples/GSE313918/GSM9378001,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378002,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4661,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,51,extracted field,female,GSE313918:SD015/22,SD015/22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8792737329160554,platform_constant,3.8792737329160554,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378002,,,test,hesrt,samples/GSE313918/GSM9378002,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378003,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3670,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,52,extracted field,female,GSE313918:SD053/21,SD053/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9407006186130644,platform_constant,3.9407006186130644,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378003,,,test,hesrt,samples/GSE313918/GSM9378003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378004,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4616,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALS,age rule: bare number read as years,adult,52,extracted field,female,GSE313918:SD053/21,SD053/21,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.924662785017499,platform_constant,3.924662785017499,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378004,,,test,hesrt,samples/GSE313918/GSM9378004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378005,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4067,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD025/17,SD025/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8708731171845283,platform_constant,3.8708731171845283,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378005,,,test,hesrt,samples/GSE313918/GSM9378005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378006,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2748,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD025/17,SD025/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8646001994753103,platform_constant,3.8646001994753103,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378006,,,test,hesrt,samples/GSE313918/GSM9378006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378007,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3997,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD025/17,SD025/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8778820124849847,platform_constant,3.8778820124849847,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378007,,,test,hesrt,samples/GSE313918/GSM9378007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378008,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3954,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,86,extracted field,female,GSE313918:SD013/23,SD013/23,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.925323933824272,platform_constant,3.925323933824272,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378008,,,test,hesrt,samples/GSE313918/GSM9378008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378009,brain,normal,,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3943,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,,luna,,Control,age rule: bare number read as years,aged,86,extracted field,female,GSE313918:SD013/23,SD013/23,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8971787399137967,platform_constant,3.8971787399137967,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378009,,,test,hesrt,samples/GSE313918/GSM9378009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378010,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3840,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD025/17,SD025/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.888901047675081,platform_constant,3.888901047675081,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378010,,,test,hesrt,samples/GSE313918/GSM9378010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378011,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4674,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,aged,73,extracted field,male,GSE313918:SD025/17,SD025/17,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8976453768549577,platform_constant,3.8976453768549577,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378011,,,test,hesrt,samples/GSE313918/GSM9378011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378012,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4511,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,58,extracted field,male,GSE313918:SD026/19,SD026/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.8964753824643594,platform_constant,3.8964753824643594,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378012,,,test,hesrt,samples/GSE313918/GSM9378012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378013,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4574,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,58,extracted field,male,GSE313918:SD026/19,SD026/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.919594528188989,platform_constant,3.919594528188989,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378013,,,test,hesrt,samples/GSE313918/GSM9378013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378014,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2759,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD031/22,SD031/22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.914538860234774,platform_constant,3.914538860234774,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378014,,,test,hesrt,samples/GSE313918/GSM9378014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378015,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2493,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD031/22,SD031/22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.934402374069018,platform_constant,3.934402374069018,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378015,,,test,hesrt,samples/GSE313918/GSM9378015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378016,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1686,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD031/22,SD031/22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.912311747999808,platform_constant,3.912311747999808,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378016,,,test,hesrt,samples/GSE313918/GSM9378016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378017,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 46,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,1745,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006483,BA46,MONDO:0004976,luna,amyotrophic lateral sclerosis,ALSci,age rule: bare number read as years,aged,74,extracted field,female,GSE313918:SD031/22,SD031/22,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.939262101091385,platform_constant,3.939262101091385,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378017,,,test,hesrt,samples/GSE313918/GSM9378017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378018,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4936,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,58,extracted field,male,GSE313918:SD026/19,SD026/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.9169632793962004,platform_constant,3.9169632793962004,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378018,,,test,hesrt,samples/GSE313918/GSM9378018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378019,brain,normal,,Brodmann (1909) area 44,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4524,Differential Cellular Mechanisms Underlie Language and Executive Decline in Amyotrophic Lateral Sclerosis [Visium spatial transcriptomics],GSE313918,GSE313918+GSE315586,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006481,BA44,,luna,,Control,age rule: bare number read as years,adult,58,extracted field,male,GSE313918:SD026/19,SD026/19,,,release v3,sequencing-based,10x Genomics Visium,,,spot,36601,counts,pixel,3.915726439536683,platform_constant,3.915726439536683,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42551425,,GSM9378019,,,test,hesrt,samples/GSE313918/GSM9378019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9378020,skin,disease,infectious disease,zone of skin,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,211545,Complex Human Hair Bearing Skin Organoids Reveal Cell-Type Specific Susceptibility and Innate Immune Responses to Herpes Simplex Virus 1,GSE313919,GSE313919,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin organoids,MONDO:0005550,mondo_predicate (Luna: perturbation),,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,imaging-based,xenium,hMulti_100g,xenium-2.0.0.5,cell,541,counts,um,1.0,verified,0.5000051754476762,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9378020,,,train,sda-all,samples/GSE313919/GSM9378020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.42, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9378021,skin,normal,,skin of body,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,84812,Complex Human Hair Bearing Skin Organoids Reveal Cell-Type Specific Susceptibility and Innate Immune Responses to Herpes Simplex Virus 1,GSE313919,GSE313919,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Skin organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,imaging-based,xenium,hMulti_100g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.49999277337297654,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9378021,,,train,sda-all,samples/GSE313919/GSM9378021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.31, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9378022,skin,disease,infectious disease,skin of body,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,76343,Complex Human Hair Bearing Skin Organoids Reveal Cell-Type Specific Susceptibility and Innate Immune Responses to Herpes Simplex Virus 1,GSE313919,GSE313919,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Skin organoids,MONDO:0005550,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,imaging-based,xenium,hMulti_100g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.4999770768384375,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9378022,,,train,sda-all,samples/GSE313919/GSM9378022,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.37, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9378023,skin,disease,infectious disease,zone of skin,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,76277,Complex Human Hair Bearing Skin Organoids Reveal Cell-Type Specific Susceptibility and Innate Immune Responses to Herpes Simplex Virus 1,GSE313919,GSE313919,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin organoids,MONDO:0005550,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,imaging-based,xenium,hMulti_100g,xenium-1.5.0.3,cell,541,counts,um,1.0,verified,0.4999865613628845,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9378023,,,train,sda-all,samples/GSE313919/GSM9378023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.36, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9380392,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),688434,Protective efficacy of AAV-expressed bNAbs co-delivered with PD-L1,GSE314035,GSE314035,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Homo sapiens,luna,UBERON:0001134,muscle,,luna,,3BNC117-only,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,3.9416554246475597,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42282848,,GSM9380392,,,train,sda-all,samples/GSE314035/GSM9380392,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.86, ""life_stage"": 1.0}",,feature_species_differs
GSM9380393,skeletal muscle,perturbation,,skeletal muscle tissue,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),683436,Protective efficacy of AAV-expressed bNAbs co-delivered with PD-L1,GSE314035,GSE314035,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Homo sapiens,luna,UBERON:0001134,muscle,,luna,,3BNC117 plus PD-L1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,3.940683878689568,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42282848,,GSM9380393,,,train,sda-all,samples/GSE314035/GSM9380393,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.86, ""life_stage"": 1.0}",,feature_species_differs
GSM9391434,other,normal,,,organoid,Homo sapiens,human,not stated,female,Visium HD,Visium HD,False,,230740,Single-cell and spatial transcriptomics of A-P and D-V patterned human trunk embryoid model (hTEM),GSE314260,GSE314260,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,hTEM.v3,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,sample text,,,,,,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,,,GSM9391434,,,train,sda-all,samples/GSE314260/GSM9391434,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.79, ""disease_status"": 0.68, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9391436,other,normal,,,organoid,Homo sapiens,human,not stated,female,Visium HD,Visium HD,False,,154502,Single-cell and spatial transcriptomics of A-P and D-V patterned human trunk embryoid model (hTEM),GSE314260,GSE314260,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,hTEM.v3,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,sample text,,,,,,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,zero_count_observations,VERIFIED,,,,,,GSM9391436,,,train,sda-all,samples/GSE314260/GSM9391436,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.91, ""disease_status"": 0.72, ""uberon"": 0.42, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9391439,other,normal,,,organoid,Homo sapiens,human,not stated,female,Visium HD,Visium HD,False,,35269,Single-cell and spatial transcriptomics of A-P and D-V patterned human trunk embryoid model (hTEM),GSE314260,GSE314260,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,hTEM.v3,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,sample text,,,,,,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9391439,,,train,sda-all,samples/GSE314260/GSM9391439,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.92, ""disease_status"": 0.76, ""uberon"": 0.02, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9391441,other,normal,,,organoid,Homo sapiens,human,not stated,female,Visium HD,Visium HD,False,,70097,Single-cell and spatial transcriptomics of A-P and D-V patterned human trunk embryoid model (hTEM),GSE314260,GSE314260,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,hTEM.v3,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,sample text,,,,,,release v3,sequencing-based,VisiumHD,,,bin,18085,counts,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9391441,,,train,sda-all,samples/GSE314260/GSM9391441,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.63, ""disease_status"": 0.81, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9393658,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,174425,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],GSE314325,GSE314325+GSE314329,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,MERFISH WT,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,42341114,,GSM9393658,,,test,sda-all,samples/GSE314325/GSM9393658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9393659,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,328945,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],GSE314325,GSE314325+GSE314329,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,MERFISH WT,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,42341114,,GSM9393659,,,test,sda-all,samples/GSE314325/GSM9393659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9393660,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,640556,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],GSE314325,GSE314325+GSE314329,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,MERFISH Lats 1wk,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,42341114,,GSM9393660,,,test,sda-all,samples/GSE314325/GSM9393660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM9393661,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,unknown,MERFISH/MERSCOPE,MERFISH,False,,648365,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],GSE314325,GSE314325+GSE314329,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,MERFISH Lats 4wk,luna,juvenile,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,42341114,,GSM9393661,,,test,sda-all,samples/GSE314325/GSM9393661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.98, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM9393662,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,115112,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],GSE314325,GSE314325+GSE314329,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,MERFISH Yap 1wk,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,42341114,,GSM9393662,,,test,sda-all,samples/GSE314325/GSM9393662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9393663,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,217913,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],GSE314325,GSE314325+GSE314329,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,MERFISH Yap 1wk,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,42341114,,GSM9393663,,,test,sda-all,samples/GSE314325/GSM9393663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9393664,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERFISH,False,,486918,Inflammatory Monocytes Constrain YAP-Induced Cell Proliferation [MERFISH],GSE314325,GSE314325+GSE314329,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,MERFISH Yap 4wk,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERFISH,,,cell,550,unknown,um,1.0,verified,,,,,,,VERIFIED,,,,42341114,,GSM9393664,,,test,sda-all,samples/GSE314325/GSM9393664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.87}",,
GSM9401276,other,perturbation,,submandibular gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,131054,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,GSE314531,GSE314531,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001736,,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.500001881396749,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401276,,,train,sda-all,samples/GSE314531/GSM9401276,sda-tissue-disease-2.3,"{""organ"": 0.45, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9401277,other,perturbation,,submandibular gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,390706,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,GSE314531,GSE314531,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001736,,,luna,,Irradiated,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401277,,,train,sda-all,samples/GSE314531/GSM9401277,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9401278,other,perturbation,,submandibular gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,129470,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,GSE314531,GSE314531,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001736,,,luna,,Hydrogel,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.49998161257699736,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401278,,,train,sda-all,samples/GSE314531/GSM9401278,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9401279,other,perturbation,,submandibular gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,171943,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,GSE314531,GSE314531,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001736,,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000111968579894,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401279,,,train,sda-all,samples/GSE314531/GSM9401279,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 0.49}",organ;disease_status;life_stage,low_confidence_annotation
GSM9401280,other,perturbation,,submandibular gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,363456,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,GSE314531,GSE314531,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001736,,,luna,,Irradiated,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.500009661035663,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401280,,,train,sda-all,samples/GSE314531/GSM9401280,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9401281,other,perturbation,,submandibular gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,215740,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,GSE314531,GSE314531,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001736,,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000131222719487,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401281,,,train,sda-all,samples/GSE314531/GSM9401281,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 0.85}",organ;disease_status,low_confidence_annotation
GSM9401282,other,perturbation,,submandibular gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,207599,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,GSE314531,GSE314531,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001736,,,luna,,Hydrogel,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.4999971846846846,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401282,,,train,sda-all,samples/GSE314531/GSM9401282,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9401283,other,perturbation,,submandibular gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,224696,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,GSE314531,GSE314531,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001736,,,luna,,Hydrogel,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000150602409639,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401283,,,train,sda-all,samples/GSE314531/GSM9401283,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 0.97}",organ,low_confidence_annotation
GSM9401284,other,perturbation,,submandibular gland,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,362563,High-Resolution Spatial Transcriptomics of Irradiated Mouse Submandibular Gland  Treated with Ep-FH,GSE314531,GSE314531,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001736,,,luna,,Irradiated,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.49999448914361294,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9401284,,,train,sda-all,samples/GSE314531/GSM9401284,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9414344,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2302,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.436110943869739,platform_constant,4.436110943869739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414344,,,train,hesrt,samples/GSE314851/GSM9414344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9414345,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1523,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.436110943869739,platform_constant,4.436110943869739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-ca1826e66722,cross_gse_redeposit,GSM9451519,train,hesrt,samples/GSE314851/GSM9414345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9414346,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1430,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.436110943869739,platform_constant,4.436110943869739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-6259f3c0f5e9,cross_gse_redeposit,GSM9451520,train,hesrt,samples/GSE314851/GSM9414346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9414347,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2205,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.436110943869739,platform_constant,4.436110943869739,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414347,,,train,hesrt,samples/GSE314851/GSM9414347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414348,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1787,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414348,,,train,hesrt,samples/GSE314851/GSM9414348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9414349,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1040,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414349,,,train,hesrt,samples/GSE314851/GSM9414349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414350,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1058,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414350,,,train,hesrt,samples/GSE314851/GSM9414350,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414351,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1273,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-cf198d0df395,cross_gse_redeposit,GSM9451521,train,hesrt,samples/GSE314851/GSM9414351,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414352,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,733,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414352,,,train,hesrt,samples/GSE314851/GSM9414352,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414353,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,749,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414353,,,train,hesrt,samples/GSE314851/GSM9414353,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9414354,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,889,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414354,,,train,hesrt,samples/GSE314851/GSM9414354,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9414355,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,778,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.542592534583681,platform_constant,4.542592534583681,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-924dda53a0a0,cross_gse_redeposit,GSM9451522,train,hesrt,samples/GSE314851/GSM9414355,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9414356,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2349,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-93b74e2a9626,cross_gse_redeposit,GSM9451523,train,hesrt,samples/GSE314851/GSM9414356,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9414357,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1014,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414357,,,train,hesrt,samples/GSE314851/GSM9414357,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9414358,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,812,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,CG-bd1415b3d79c,cross_gse_redeposit,GSM9451524,train,hesrt,samples/GSE314851/GSM9414358,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9414359,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1418,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Visium],GSE314851,GSE314851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,coronary artery disease,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.508950280735906,platform_constant,4.508950280735906,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41610194,10.1126/science.adx1736,GSM9414359,,,train,hesrt,samples/GSE314851/GSM9414359,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9416128,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3740,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.5315021153078575,platform_constant,0.5315021153078575,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416128,,,train,hesrt,samples/GSE314910/GSM9416128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416129,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4137,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,No Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.7886055102201678,platform_constant,0.7886055102201678,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416129,,,train,hesrt,samples/GSE314910/GSM9416129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9416130,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4302,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,No Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,1.3120485356928033,platform_constant,1.3120485356928033,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416130,,,train,hesrt,samples/GSE314910/GSM9416130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9416131,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4090,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,No Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.7880199325893243,platform_constant,0.7880199325893243,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416131,,,train,hesrt,samples/GSE314910/GSM9416131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416132,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1800,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,No Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,1.3092093204052448,platform_constant,1.3092093204052448,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416132,,,train,hesrt,samples/GSE314910/GSM9416132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9416133,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4974,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,No Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,1.010307195245044,platform_constant,1.010307195245044,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416133,,,train,hesrt,samples/GSE314910/GSM9416133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416134,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3676,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,No Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.5288061314723693,platform_constant,0.5288061314723693,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416134,,,train,hesrt,samples/GSE314910/GSM9416134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9416135,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,908,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.5256558197290908,platform_constant,0.5256558197290908,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416135,,,train,hesrt,samples/GSE314910/GSM9416135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416136,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4571,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.7925283906091234,platform_constant,0.7925283906091234,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416136,,,train,hesrt,samples/GSE314910/GSM9416136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416137,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4976,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,0.7870356875256983,platform_constant,0.7870356875256983,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416137,,,train,hesrt,samples/GSE314910/GSM9416137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416138,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4709,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,5.504109708006646,platform_constant,5.504109708006646,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416138,,,train,hesrt,samples/GSE314910/GSM9416138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9416139,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,864,Spatial transcriptomic signatures of cardiac sarcoidosis,GSE314910,GSE314910,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,heart,MONDO:0001707,luna,cardiac sarcoidosis,No Immunosuppression,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.0157294325794455,platform_constant,4.0157294325794455,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9416139,,,train,hesrt,samples/GSE314910/GSM9416139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9422182,oral cavity,disease,iron deficiency anemia;deficiency anemia,calcareous tooth,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Stereo-seq,Stereo-seq,False,,4357,A Spatiotemporal Cell Atlas of the Developing Rat Tooth Germ Reveals Iron-Deficiency Induced Ameloblast Dysregulation,GSE315151,GSE315151,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0001091,tooth,MONDO:0001356;MONDO:0001639,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,28476,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9422182,,,train,sda-all,samples/GSE315151/GSM9422182,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9422183,oral cavity,normal,,calcareous tooth,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Stereo-seq,Stereo-seq,False,,6180,A Spatiotemporal Cell Atlas of the Developing Rat Tooth Germ Reveals Iron-Deficiency Induced Ameloblast Dysregulation,GSE315151,GSE315151,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0001091,tooth,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,30075,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9422183,,,train,sda-all,samples/GSE315151/GSM9422183,sda-tissue-disease-2.4,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.9400000000000001, ""life_stage"": 0.99}",,
GSM9423409,other,normal,,,engineered tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,430490,A Single-Cell Bioprinting Approach with Subcellular Resolution to Reconstruct Native Cellular Microenvironments and Interrogate Spatial Biology,GSE315233,GSE315233,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Engineered in vitro model,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.290404598293279,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42281981,,GSM9423409,,,train,sda-all,samples/GSE315233/GSM9423409,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 0.33, ""uberon"": 0.73, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9423410,other,normal,,,engineered tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,366883,A Single-Cell Bioprinting Approach with Subcellular Resolution to Reconstruct Native Cellular Microenvironments and Interrogate Spatial Biology,GSE315233,GSE315233,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Engineered in vitro model,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.6369121101022532,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42281981,,GSM9423410,,,train,sda-all,samples/GSE315233/GSM9423410,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.75, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433805,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,132370,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K2_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000045863144377,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433805,,,train,sda-all,samples/GSE315243/GSM9433805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433806,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,314992,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K2d1_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999909420289855,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433806,,,train,sda-all,samples/GSE315243/GSM9433806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433807,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,205308,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K2d1_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000111344404148,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433807,,,train,sda-all,samples/GSE315243/GSM9433807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433808,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,111065,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K3_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999840357598978,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433808,,,train,sda-all,samples/GSE315243/GSM9433808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433809,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,68763,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K3_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000171971017151,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433809,,,train,sda-all,samples/GSE315243/GSM9433809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433810,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,178694,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K3_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998497144574694,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433810,,,train,sda-all,samples/GSE315243/GSM9433810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433811,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,66389,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K3_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999690891605989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433811,,,train,sda-all,samples/GSE315243/GSM9433811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.56, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9433812,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,81600,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K2_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000090336568243,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433812,,,train,sda-all,samples/GSE315243/GSM9433812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433813,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,127105,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K3_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000171703296703,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433813,,,train,sda-all,samples/GSE315243/GSM9433813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433814,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,91534,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K3_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998798076923084,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433814,,,train,sda-all,samples/GSE315243/GSM9433814,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.91, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433815,pancreas,disease,neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,138931,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K2_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499999059938332,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433815,,,train,sda-all,samples/GSE315243/GSM9433815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9433816,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,236220,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K2_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999912713306856,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433816,,,train,sda-all,samples/GSE315243/GSM9433816,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433817,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,107097,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K3_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999867272298254,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433817,,,train,sda-all,samples/GSE315243/GSM9433817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433818,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,78357,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K2_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999778813259407,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433818,,,train,sda-all,samples/GSE315243/GSM9433818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433819,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,246550,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K2_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000019427032067,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433819,,,train,sda-all,samples/GSE315243/GSM9433819,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9433820,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,68215,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K2d1_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997690886699503,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433820,,,train,sda-all,samples/GSE315243/GSM9433820,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433821,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,138970,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K2d1_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000245249896736,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433821,,,train,sda-all,samples/GSE315243/GSM9433821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433822,pancreas,disease,neoplastic disease or syndrome,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,587225,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0023370,luna,,K2_vehicle,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103546466477,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433822,,,train,sda-all,samples/GSE315243/GSM9433822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433823,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,82082,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K2d1_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896935550365,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433823,,,train,sda-all,samples/GSE315243/GSM9433823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433824,pancreas,disease,neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,219619,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K2d1_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103455410718,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433824,,,train,sda-all,samples/GSE315243/GSM9433824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9433825,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,701989,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K2_vehicle,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999884962267627,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433825,,,train,sda-all,samples/GSE315243/GSM9433825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433826,pancreas,disease,neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,285151,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,mondo_predicate (Luna: perturbation),,K2_MRTX1133,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999884287454324,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433826,,,train,sda-all,samples/GSE315243/GSM9433826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9433827,pancreas,disease,neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,468761,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,mondo_predicate (Luna: perturbation),,K2_MRTX1133,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998488608883795,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433827,,,train,sda-all,samples/GSE315243/GSM9433827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433828,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,594930,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,mondo_predicate (Luna: perturbation),,K2_MRTX1133,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999085945497973,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433828,,,train,sda-all,samples/GSE315243/GSM9433828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.51, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9433829,pancreas,disease,neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,335571,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,mondo_predicate (Luna: perturbation),,K2_MRTX1133,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000038189594972,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433829,,,train,sda-all,samples/GSE315243/GSM9433829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433830,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,790847,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K3_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000059910243562,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433830,,,train,sda-all,samples/GSE315243/GSM9433830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433831,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,531738,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K3_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000005447335164,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433831,,,train,sda-all,samples/GSE315243/GSM9433831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433832,pancreas,normal,,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,557782,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,,luna,,K4_ctrl,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000034468495794,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433832,,,train,sda-all,samples/GSE315243/GSM9433832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9433833,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,623758,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K3_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000092661230541,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433833,,,train,sda-all,samples/GSE315243/GSM9433833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433834,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1234164,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K3_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999073387694587,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433834,,,train,sda-all,samples/GSE315243/GSM9433834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9433835,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,715372,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K3_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999939995636047,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433835,,,train,sda-all,samples/GSE315243/GSM9433835,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.65, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9433836,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,396241,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K3_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999914675767918,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433836,,,train,sda-all,samples/GSE315243/GSM9433836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.54, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9433837,pancreas,disease,neoplasm,pancreas,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,340164,Oncogenic and tumor-suppressive forces converge on a progenitor-orchestrated niche to shape early tumorigenesis,GSE315243,GSE315243,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0005070,luna,,K3_shp53,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000031855249746,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41990751,,GSM9433837,,,train,sda-all,samples/GSE315243/GSM9433837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9423568,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7403,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000044164409375,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423568,,,train,sda-all,samples/GSE315246/GSM9423568,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423569,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7194,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000235682300259,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423569,,,train,sda-all,samples/GSE315246/GSM9423569,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9423570,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7953,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999852871939736,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41610194,,GSM9423570,,,train,sda-all,samples/GSE315246/GSM9423570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9423571,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,8080,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998452331820054,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41610194,,GSM9423571,,,train,sda-all,samples/GSE315246/GSM9423571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423572,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10244,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423572,,,train,sda-all,samples/GSE315246/GSM9423572,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423573,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10288,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499967461296068,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423573,,,train,sda-all,samples/GSE315246/GSM9423573,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9423574,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,11120,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499979332010582,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423574,,,train,sda-all,samples/GSE315246/GSM9423574,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9423575,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19051,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000068832599119,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423575,,,train,sda-all,samples/GSE315246/GSM9423575,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9423576,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19268,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000172239573765,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423576,,,train,sda-all,samples/GSE315246/GSM9423576,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423577,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,17373,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998452331820054,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423577,,,train,sda-all,samples/GSE315246/GSM9423577,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9423578,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10685,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103512900976,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423578,,,train,sda-all,samples/GSE315246/GSM9423578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423579,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10580,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423579,,,train,sda-all,samples/GSE315246/GSM9423579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9423580,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6004,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999852576954829,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423580,,,train,sda-all,samples/GSE315246/GSM9423580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9423581,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,5878,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999948524365133,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423581,,,train,sda-all,samples/GSE315246/GSM9423581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423582,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,11029,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999915438965724,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423582,,,train,sda-all,samples/GSE315246/GSM9423582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9423583,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,14277,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999767873723305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423583,,,train,sda-all,samples/GSE315246/GSM9423583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9423584,blood vessel,disease,atherosclerosis,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,21718,Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-Directed Immunotherapy [Xenium in situ],GSE315246,GSE315246,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,MONDO:0005311,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999938129021613,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41610194,,GSM9423584,,,train,sda-all,samples/GSE315246/GSM9423584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9424602,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,11786,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5051,counts,um,1.0,verified,0.500061041779707,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424602,,,train,sda-all,samples/GSE315295/GSM9424602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9424603,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10905,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,4706,counts,um,1.0,verified,0.4999697946033025,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424603,,,train,sda-all,samples/GSE315295/GSM9424603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9424604,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10215,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,4724,counts,um,1.0,verified,0.5001004016064257,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424604,,,train,sda-all,samples/GSE315295/GSM9424604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9424605,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,11969,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,4820,counts,um,1.0,verified,0.5001004016064257,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424605,,,train,sda-all,samples/GSE315295/GSM9424605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9424606,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,16498,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5806,counts,um,1.0,verified,0.5000101433594807,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424606,,,train,sda-all,samples/GSE315295/GSM9424606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 0.28}",disease_status;life_stage,low_confidence_annotation
GSM9424607,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,14654,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,neonatal or infant,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5564,counts,um,1.0,verified,0.5000067879446104,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424607,,,train,sda-all,samples/GSE315295/GSM9424607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.41000000000000003}",disease_status;life_stage,low_confidence_annotation
GSM9424608,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,12441,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5180,counts,um,1.0,verified,0.4999923281505728,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424608,,,train,sda-all,samples/GSE315295/GSM9424608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.63}",disease_status,low_confidence_annotation
GSM9424609,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24039,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5676,counts,um,1.0,verified,0.4999923281505728,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424609,,,train,sda-all,samples/GSE315295/GSM9424609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9424610,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6303,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,4593,counts,um,1.0,verified,0.5000150602409638,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424610,,,train,sda-all,samples/GSE315295/GSM9424610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9424611,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,12243,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5193,counts,um,1.0,verified,0.5000102375102374,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424611,,,train,sda-all,samples/GSE315295/GSM9424611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9424612,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,15357,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5296,counts,um,1.0,verified,0.4999357239512855,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424612,,,train,sda-all,samples/GSE315295/GSM9424612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9424613,skin,normal,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6604,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,4840,counts,um,1.0,verified,0.5000101902173913,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424613,,,train,sda-all,samples/GSE315295/GSM9424613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.15, ""uberon"": 0.99, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM9424614,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,15708,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5203,counts,um,1.0,verified,0.4999864901378006,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424614,,,train,sda-all,samples/GSE315295/GSM9424614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9424615,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,14359,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5979,counts,um,1.0,verified,0.500061041779707,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424615,,,train,sda-all,samples/GSE315295/GSM9424615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM9424616,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7779,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5152,counts,um,1.0,verified,0.5000101902173913,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424616,,,train,sda-all,samples/GSE315295/GSM9424616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9424617,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7945,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,5123,counts,um,1.0,verified,0.5000406834825061,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424617,,,train,sda-all,samples/GSE315295/GSM9424617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM9424618,skin,perturbation,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,18089,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,9106,counts,um,1.0,verified,0.5000085875240451,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424618,,,train,sda-all,samples/GSE315295/GSM9424618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9424619,skin,disease,,skin of back,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19605,Distinct nociceptor roles in inflammation and itch revealed by subset-specific transcriptomic adaptation,GSE315295,GSE315295,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001068,back skin,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,10215,counts,um,1.0,verified,0.4999814936667215,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,41990747,,GSM9424619,,,train,sda-all,samples/GSE315295/GSM9424619,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9427137,heart,disease,endocardial fibroelastosis,heart left ventricle,primary tissue,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERSCOPE,False,,12270,Spatial and single-nucleus multi-omics profiling reveals heterogeneous endothelial cell overabundance in endocardial fibroelastosis [MERFISH],GSE315408,GSE315408,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002084,"left ventricle, EFE",MONDO:0009169,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9427137,,,train,sda-all,samples/GSE315408/GSM9427137,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9427138,heart,disease,endocardial fibroelastosis,heart left ventricle,primary tissue,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERSCOPE,False,,150691,Spatial and single-nucleus multi-omics profiling reveals heterogeneous endothelial cell overabundance in endocardial fibroelastosis [MERFISH],GSE315408,GSE315408,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002084,"left ventricle, EFE",MONDO:0009169,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9427138,,,train,sda-all,samples/GSE315408/GSM9427138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9427139,heart,normal,,heart left ventricle,primary tissue,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERSCOPE,False,,183310,Spatial and single-nucleus multi-omics profiling reveals heterogeneous endothelial cell overabundance in endocardial fibroelastosis [MERFISH],GSE315408,GSE315408,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002084,"left ventricle, healthy",,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9427139,,,train,sda-all,samples/GSE315408/GSM9427139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9427140,heart,normal,,heart left ventricle,primary tissue,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERSCOPE,False,,85903,Spatial and single-nucleus multi-omics profiling reveals heterogeneous endothelial cell overabundance in endocardial fibroelastosis [MERFISH],GSE315408,GSE315408,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002084,"left ventricle, healthy",,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9427140,,,train,sda-all,samples/GSE315408/GSM9427140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9427141,heart,normal,,heart left ventricle,primary tissue,Homo sapiens,human,not stated,male,MERFISH/MERSCOPE,MERSCOPE,False,,88577,Spatial and single-nucleus multi-omics profiling reveals heterogeneous endothelial cell overabundance in endocardial fibroelastosis [MERFISH],GSE315408,GSE315408,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002084,"left ventricle, healthy",,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9427141,,,train,sda-all,samples/GSE315408/GSM9427141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9427181,lung,not stated,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1098312,Fishing with Two Lines: A Hybrid Approach to Spatial Transcriptomic Discovery,GSE315411,GSE315411,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,8162,counts,um,1.0,verified,0.4999950965436081,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41542551;42509025,,GSM9427181,,,train,sda-all,samples/GSE315411/GSM9427181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9427182,lung,not stated,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1111938,Fishing with Two Lines: A Hybrid Approach to Spatial Transcriptomic Discovery,GSE315411,GSE315411,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,7807,counts,um,1.0,verified,0.4999912778020061,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41542551;42509025,,GSM9427182,,,train,sda-all,samples/GSE315411/GSM9427182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9427183,lung,not stated,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1107123,Fishing with Two Lines: A Hybrid Approach to Spatial Transcriptomic Discovery,GSE315411,GSE315411,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000070821529745,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41542551;42509025,,GSM9427183,,,train,sda-all,samples/GSE315411/GSM9427183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9427184,lung,not stated,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1110346,Fishing with Two Lines: A Hybrid Approach to Spatial Transcriptomic Discovery,GSE315411,GSE315411,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999912778020061,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41542551;42509025,,GSM9427184,,,train,sda-all,samples/GSE315411/GSM9427184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.44, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9427185,lung,not stated,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1104638,Fishing with Two Lines: A Hybrid Approach to Spatial Transcriptomic Discovery,GSE315411,GSE315411,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,7792,counts,um,1.0,verified,0.4999912778020061,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41542551;42509025,,GSM9427185,,,train,sda-all,samples/GSE315411/GSM9427185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM10044212,liver,normal,,liver,primary tissue,Bos taurus,domestic cattle,adult,unknown,Stereo-seq,Stereo-seq,False,,128906,A High-Resolution Stereo-seq Spatial Transcriptomic Dataset of the Bovine Liver,GSE315416,GSE315416,9913,Bos taurus,9913,,False,False,GEO organism field,Bos taurus,,luna,UBERON:0002107,Cattle Liver,,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,stereo-seq,,,bin,19045,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42737743,,GSM10044212,,,train,sda-all,samples/GSE315416/GSM10044212,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.97, ""life_stage"": 0.79}",,
GSM9427230,liver,normal,,liver,primary tissue,Bos taurus,domestic cattle,adult,unknown,Stereo-seq,Stereo-seq,False,,111539,A High-Resolution Stereo-seq Spatial Transcriptomic Dataset of the Bovine Liver,GSE315416,GSE315416,9913,Bos taurus,9913,,False,False,GEO organism field,Bos taurus,,luna,UBERON:0002107,Cattle Liver,,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,stereo-seq,,,bin,18680,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42737743,,GSM9427230,,,train,sda-all,samples/GSE315416/GSM9427230,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.98, ""life_stage"": 0.84}",,
GSM9428101,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,172225,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,CD1 mouse fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,13098,counts,um,1.0,verified,0.5000074812393536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428101,,,train,sda-all,samples/GSE315435/GSM9428101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9428102,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,244107,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,CD1 mouse fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,13098,counts,um,1.0,verified,0.49999884962267627,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428102,,,train,sda-all,samples/GSE315435/GSM9428102,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9428103,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,329957,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,CD1 mouse fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,13098,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428103,,,train,sda-all,samples/GSE315435/GSM9428103,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9428104,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,111807,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,CD1 mouse fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,13098,counts,um,1.0,verified,0.4999972401611746,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428104,,,train,sda-all,samples/GSE315435/GSM9428104,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM9428105,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,304788,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,CD1 mouse fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,13098,counts,um,1.0,verified,0.5000071195567751,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428105,,,train,sda-all,samples/GSE315435/GSM9428105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 0.71}",,
GSM9428106,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,328589,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002113,CD1 mouse fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mKidney_100g,xenium-3.0.0.15,cell,13098,counts,um,1.0,verified,0.500001379995584,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428106,,,train,sda-all,samples/GSE315435/GSM9428106,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9428107,kidney,normal,,kidney,primary tissue,Homo sapiens,human,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,338916,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,human fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_91g,xenium-3.1.0.4,cell,9691,counts,um,1.0,verified,0.49999756667315554,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428107,,,train,sda-all,samples/GSE315435/GSM9428107,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9428108,kidney,normal,,kidney,primary tissue,Homo sapiens,human,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,188382,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,human fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_91g,xenium-3.1.0.4,cell,9691,counts,um,1.0,verified,0.5000038803807947,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428108,,,train,sda-all,samples/GSE315435/GSM9428108,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9428109,kidney,normal,,kidney,primary tissue,Homo sapiens,human,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,288214,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,human fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_91g,xenium-3.1.0.4,cell,9691,counts,um,1.0,verified,0.500008409232043,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428109,,,train,sda-all,samples/GSE315435/GSM9428109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9428110,kidney,normal,,kidney,primary tissue,Homo sapiens,human,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,295662,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,human fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_91g,xenium-3.1.0.4,cell,9691,counts,um,1.0,verified,0.5000082781456954,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428110,,,train,sda-all,samples/GSE315435/GSM9428110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9428111,kidney,normal,,kidney,primary tissue,Homo sapiens,human,fetal,unknown,Xenium,Xenium,True,fluorescence: DAPI,433710,Rhythmic nephron formation in the developing kidney,GSE315435,GSE315435,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,human fetal kidney,,luna,,wild-type,luna,fetal,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,hMulti_91g,xenium-3.1.0.4,cell,9691,counts,um,1.0,verified,0.5000054808535516,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9428111,,,train,sda-all,samples/GSE315435/GSM9428111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9429345,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1925,Single-Cell Multi-omics Profiling of Mouse Hepatic Immune Microenvironment Reveals Neutrophil-Kupffer Cell Crosstalk via Thrombospondin-1/CD36 after Surgical Stress,GSE315482,GSE315482,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,sham operation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.097089121608903,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9429345,,,train,sda-all,samples/GSE315482/GSM9429345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9429346,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2844,Single-Cell Multi-omics Profiling of Mouse Hepatic Immune Microenvironment Reveals Neutrophil-Kupffer Cell Crosstalk via Thrombospondin-1/CD36 after Surgical Stress,GSE315482,GSE315482,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,sham operation,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.101299961484699,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9429346,,,train,sda-all,samples/GSE315482/GSM9429346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9429347,liver,disease,ischemia reperfusion injury,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3438,Single-Cell Multi-omics Profiling of Mouse Hepatic Immune Microenvironment Reveals Neutrophil-Kupffer Cell Crosstalk via Thrombospondin-1/CD36 after Surgical Stress,GSE315482,GSE315482,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005203,mondo_predicate (Luna: perturbation),,ischemia-reperfusion injury (60min ischemia/6h reperfusion),luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,5.222850592747951,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9429347,,,train,sda-all,samples/GSE315482/GSM9429347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9429348,liver,disease,ischemia reperfusion injury,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1474,Single-Cell Multi-omics Profiling of Mouse Hepatic Immune Microenvironment Reveals Neutrophil-Kupffer Cell Crosstalk via Thrombospondin-1/CD36 after Surgical Stress,GSE315482,GSE315482,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005203,luna,,ischemia-reperfusion injury (60min ischemia/6h reperfusion),luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,5.229300808556978,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,check whether the stain is H&E (looks reddish),,,GSM9429348,,,train,sda-all,samples/GSE315482/GSM9429348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9429458,prostate,disease,prostate cancer,prostate gland,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3729,CD73 inhibition overcomes adaptive immune resistance to PARP inhibition in models of prostate cancer,GSE315487,GSE315487,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0002367,prostate cancer,MONDO:0008315,luna,,Veh,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9429458,,,train,sda-all,samples/GSE315487/GSM9429458,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 0.65, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9429459,other,disease,prostate cancer,,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3864,CD73 inhibition overcomes adaptive immune resistance to PARP inhibition in models of prostate cancer,GSE315487,GSE315487,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,manual,,prostate cancer,MONDO:0008315,luna,,Olaparib,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9429459,,,train,sda-all,samples/GSE315487/GSM9429459,sda-tissue-disease-2.3,"{""organ"": null, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.87, ""uberon"": null, ""life_stage"": 1.0}",,
GSM9429460,prostate,disease,prostate cancer,prostate gland,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1992,CD73 inhibition overcomes adaptive immune resistance to PARP inhibition in models of prostate cancer,GSE315487,GSE315487,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0002367,prostate cancer,MONDO:0008315,luna,,a-CD73,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9429460,,,train,sda-all,samples/GSE315487/GSM9429460,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 0.89, ""disease_status"": 0.93, ""uberon"": 0.93, ""life_stage"": 0.99}",,
GSM9429461,prostate,disease,prostate cancer,prostate gland,xenograft,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3608,CD73 inhibition overcomes adaptive immune resistance to PARP inhibition in models of prostate cancer,GSE315487,GSE315487,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,uberon_chain,UBERON:0002367,prostate cancer,MONDO:0008315,luna,,Combination,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9429461,,,train,sda-all,samples/GSE315487/GSM9429461,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 0.88, ""disease_status"": 0.97, ""uberon"": 0.9500000000000001, ""life_stage"": 0.97}",,
GSM9431064,brain,normal,,choroid plexus,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,21331,Spatial Transcriptomics Data from Human Choroid Plexus,GSE315553,GSE315553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001886,Choroid Plexus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,slide-seq,,,bead,16662,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41648589,,GSM9431064,,,val,sda-all,samples/GSE315553/GSM9431064,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9431065,brain,normal,,choroid plexus,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,58459,Spatial Transcriptomics Data from Human Choroid Plexus,GSE315553,GSE315553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001886,Choroid Plexus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,slide-seq,,,bead,24931,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41648589,,GSM9431065,,,val,sda-all,samples/GSE315553/GSM9431065,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9431066,brain,normal,,choroid plexus,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,10022,Spatial Transcriptomics Data from Human Choroid Plexus,GSE315553,GSE315553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001886,Choroid Plexus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,slide-seq,,,bead,13122,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41648589,,GSM9431066,,,val,sda-all,samples/GSE315553/GSM9431066,sda-tissue-disease-2.3,"{""organ"": 0.43, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9431067,brain,not stated,,choroid plexus,primary tissue,Homo sapiens,human,not stated,unknown,Slide-seq,Slide-seq,False,,8173,Spatial Transcriptomics Data from Human Choroid Plexus,GSE315553,GSE315553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,uberon_chain,UBERON:0001886,Choroid Plexus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,slide-seq,,,bead,18343,counts,pixel,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,41648589,,GSM9431067,,,val,sda-all,samples/GSE315553/GSM9431067,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9439591,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,452,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439591,,,train,sda-all,samples/GSE315907/GSM9439591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9439592,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,615,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439592,,,train,sda-all,samples/GSE315907/GSM9439592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9439593,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,526,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439593,,,train,sda-all,samples/GSE315907/GSM9439593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9439594,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,553,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439594,,,train,sda-all,samples/GSE315907/GSM9439594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM9439595,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,611,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439595,,,train,sda-all,samples/GSE315907/GSM9439595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.62}",,
GSM9439596,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,681,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439596,,,train,sda-all,samples/GSE315907/GSM9439596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9439597,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,549,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439597,,,train,sda-all,samples/GSE315907/GSM9439597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM9439598,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,529,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439598,,,train,sda-all,samples/GSE315907/GSM9439598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.38}",life_stage,low_confidence_annotation
GSM9439599,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,574,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439599,,,train,sda-all,samples/GSE315907/GSM9439599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.79}",,
GSM9439600,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,602,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439600,,,train,sda-all,samples/GSE315907/GSM9439600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9439601,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,568,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439601,,,train,sda-all,samples/GSE315907/GSM9439601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM9439602,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,642,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439602,,,train,sda-all,samples/GSE315907/GSM9439602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439603,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,542,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439603,,,train,sda-all,samples/GSE315907/GSM9439603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439604,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,512,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439604,,,train,sda-all,samples/GSE315907/GSM9439604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439605,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,561,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439605,,,train,sda-all,samples/GSE315907/GSM9439605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439606,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,565,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439606,,,train,sda-all,samples/GSE315907/GSM9439606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439607,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,818,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439607,,,train,sda-all,samples/GSE315907/GSM9439607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439608,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,879,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439608,,,train,sda-all,samples/GSE315907/GSM9439608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439609,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,663,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439609,,,train,sda-all,samples/GSE315907/GSM9439609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439610,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,682,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439610,,,train,sda-all,samples/GSE315907/GSM9439610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439611,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,551,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439611,,,train,sda-all,samples/GSE315907/GSM9439611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439612,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,924,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439612,,,train,sda-all,samples/GSE315907/GSM9439612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439613,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,814,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439613,,,train,sda-all,samples/GSE315907/GSM9439613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439614,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,865,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439614,,,train,sda-all,samples/GSE315907/GSM9439614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439615,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1878,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439615,,,train,sda-all,samples/GSE315907/GSM9439615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439616,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,875,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439616,,,train,sda-all,samples/GSE315907/GSM9439616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439617,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,812,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439617,,,train,sda-all,samples/GSE315907/GSM9439617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439618,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,894,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439618,,,train,sda-all,samples/GSE315907/GSM9439618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439619,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,897,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439619,,,train,sda-all,samples/GSE315907/GSM9439619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.98, ""life_stage"": 0.36}",life_stage,low_confidence_annotation
GSM9439620,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,828,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439620,,,train,sda-all,samples/GSE315907/GSM9439620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9439621,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,831,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439621,,,train,sda-all,samples/GSE315907/GSM9439621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.63}",,
GSM9439622,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,784,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439622,,,train,sda-all,samples/GSE315907/GSM9439622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9439623,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,893,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439623,,,train,sda-all,samples/GSE315907/GSM9439623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9439624,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,755,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439624,,,train,sda-all,samples/GSE315907/GSM9439624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.28}",life_stage,low_confidence_annotation
GSM9439625,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,819,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439625,,,train,sda-all,samples/GSE315907/GSM9439625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9439626,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,736,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439626,,,train,sda-all,samples/GSE315907/GSM9439626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9439627,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,701,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439627,,,train,sda-all,samples/GSE315907/GSM9439627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.67}",,
GSM9439628,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,682,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439628,,,train,sda-all,samples/GSE315907/GSM9439628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9439629,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,738,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439629,,,train,sda-all,samples/GSE315907/GSM9439629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.46}",disease_status;life_stage,low_confidence_annotation
GSM9439630,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,743,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439630,,,train,sda-all,samples/GSE315907/GSM9439630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.65}",disease_status,low_confidence_annotation
GSM9439631,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,713,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439631,,,train,sda-all,samples/GSE315907/GSM9439631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9439632,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,751,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439632,,,train,sda-all,samples/GSE315907/GSM9439632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM9439633,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,774,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439633,,,train,sda-all,samples/GSE315907/GSM9439633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.65}",,
GSM9439634,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,804,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439634,,,train,sda-all,samples/GSE315907/GSM9439634,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9439635,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,717,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439635,,,train,sda-all,samples/GSE315907/GSM9439635,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439636,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,714,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439636,,,train,sda-all,samples/GSE315907/GSM9439636,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439637,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,753,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439637,,,train,sda-all,samples/GSE315907/GSM9439637,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439638,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,699,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439638,,,train,sda-all,samples/GSE315907/GSM9439638,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9439639,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,669,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439639,,,train,sda-all,samples/GSE315907/GSM9439639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439640,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,774,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439640,,,train,sda-all,samples/GSE315907/GSM9439640,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9439641,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,678,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439641,,,train,sda-all,samples/GSE315907/GSM9439641,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439642,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,672,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439642,,,train,sda-all,samples/GSE315907/GSM9439642,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439643,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,787,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439643,,,train,sda-all,samples/GSE315907/GSM9439643,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439644,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,574,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439644,,,train,sda-all,samples/GSE315907/GSM9439644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9439645,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,648,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439645,,,train,sda-all,samples/GSE315907/GSM9439645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM9439646,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,665,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439646,,,train,sda-all,samples/GSE315907/GSM9439646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM9439647,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,518,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439647,,,train,sda-all,samples/GSE315907/GSM9439647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9439648,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,600,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439648,,,train,sda-all,samples/GSE315907/GSM9439648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9439649,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,519,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439649,,,train,sda-all,samples/GSE315907/GSM9439649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9439650,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,560,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439650,,,train,sda-all,samples/GSE315907/GSM9439650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.6900000000000001}",,
GSM9439651,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,730,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439651,,,train,sda-all,samples/GSE315907/GSM9439651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9439652,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,714,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439652,,,train,sda-all,samples/GSE315907/GSM9439652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439653,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,713,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439653,,,train,sda-all,samples/GSE315907/GSM9439653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439654,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,714,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439654,,,train,sda-all,samples/GSE315907/GSM9439654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439655,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,670,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439655,,,train,sda-all,samples/GSE315907/GSM9439655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439656,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,657,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439656,,,train,sda-all,samples/GSE315907/GSM9439656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439657,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,611,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439657,,,train,sda-all,samples/GSE315907/GSM9439657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439658,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,627,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439658,,,train,sda-all,samples/GSE315907/GSM9439658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439659,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,575,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439659,,,train,sda-all,samples/GSE315907/GSM9439659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439660,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,656,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439660,,,train,sda-all,samples/GSE315907/GSM9439660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439661,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,748,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439661,,,train,sda-all,samples/GSE315907/GSM9439661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9439662,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,857,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439662,,,train,sda-all,samples/GSE315907/GSM9439662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.36}",life_stage,low_confidence_annotation
GSM9439663,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,874,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439663,,,train,sda-all,samples/GSE315907/GSM9439663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9439664,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,860,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439664,,,train,sda-all,samples/GSE315907/GSM9439664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9439665,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,927,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439665,,,train,sda-all,samples/GSE315907/GSM9439665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9439666,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,831,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439666,,,train,sda-all,samples/GSE315907/GSM9439666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9439667,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,961,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439667,,,train,sda-all,samples/GSE315907/GSM9439667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9439668,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,884,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439668,,,train,sda-all,samples/GSE315907/GSM9439668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM9439669,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,961,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439669,,,train,sda-all,samples/GSE315907/GSM9439669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439670,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,900,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439670,,,train,sda-all,samples/GSE315907/GSM9439670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439671,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,739,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439671,,,train,sda-all,samples/GSE315907/GSM9439671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9439672,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,869,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439672,,,train,sda-all,samples/GSE315907/GSM9439672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439673,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,845,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439673,,,train,sda-all,samples/GSE315907/GSM9439673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439674,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1162,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439674,,,train,sda-all,samples/GSE315907/GSM9439674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439675,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,830,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439675,,,train,sda-all,samples/GSE315907/GSM9439675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9439676,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,916,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439676,,,train,sda-all,samples/GSE315907/GSM9439676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439677,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,859,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439677,,,train,sda-all,samples/GSE315907/GSM9439677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439678,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,921,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439678,,,train,sda-all,samples/GSE315907/GSM9439678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439679,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,744,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439679,,,train,sda-all,samples/GSE315907/GSM9439679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9439680,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,758,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439680,,,train,sda-all,samples/GSE315907/GSM9439680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9439681,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,779,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439681,,,train,sda-all,samples/GSE315907/GSM9439681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9439682,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,796,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439682,,,train,sda-all,samples/GSE315907/GSM9439682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9439683,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,774,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439683,,,train,sda-all,samples/GSE315907/GSM9439683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.38}",disease_status;life_stage,low_confidence_annotation
GSM9439684,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,724,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439684,,,train,sda-all,samples/GSE315907/GSM9439684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 0.30000000000000004}",life_stage,low_confidence_annotation
GSM9439685,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,752,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439685,,,train,sda-all,samples/GSE315907/GSM9439685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.51}",disease_status;life_stage,low_confidence_annotation
GSM9439686,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,659,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439686,,,train,sda-all,samples/GSE315907/GSM9439686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439687,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,639,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439687,,,train,sda-all,samples/GSE315907/GSM9439687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439688,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,695,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439688,,,train,sda-all,samples/GSE315907/GSM9439688,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439689,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,706,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439689,,,train,sda-all,samples/GSE315907/GSM9439689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439690,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,697,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439690,,,train,sda-all,samples/GSE315907/GSM9439690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439691,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,699,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439691,,,train,sda-all,samples/GSE315907/GSM9439691,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439692,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,692,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439692,,,train,sda-all,samples/GSE315907/GSM9439692,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439693,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,716,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439693,,,train,sda-all,samples/GSE315907/GSM9439693,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439694,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,655,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439694,,,train,sda-all,samples/GSE315907/GSM9439694,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439695,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,536,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439695,,,train,sda-all,samples/GSE315907/GSM9439695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.78}",,
GSM9439696,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,472,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439696,,,train,sda-all,samples/GSE315907/GSM9439696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9439697,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,504,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439697,,,train,sda-all,samples/GSE315907/GSM9439697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM9439698,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,781,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439698,,,train,sda-all,samples/GSE315907/GSM9439698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.63}",,
GSM9439699,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,627,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439699,,,train,sda-all,samples/GSE315907/GSM9439699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.32}",life_stage,low_confidence_annotation
GSM9439700,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,570,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439700,,,train,sda-all,samples/GSE315907/GSM9439700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM9439701,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,517,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439701,,,train,sda-all,samples/GSE315907/GSM9439701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9439702,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,651,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439702,,,train,sda-all,samples/GSE315907/GSM9439702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.76}",,
GSM9439703,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,680,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439703,,,train,sda-all,samples/GSE315907/GSM9439703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439704,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,732,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439704,,,train,sda-all,samples/GSE315907/GSM9439704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439705,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,718,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439705,,,train,sda-all,samples/GSE315907/GSM9439705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439706,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,730,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439706,,,train,sda-all,samples/GSE315907/GSM9439706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439707,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,768,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439707,,,train,sda-all,samples/GSE315907/GSM9439707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439708,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,832,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439708,,,train,sda-all,samples/GSE315907/GSM9439708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439709,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,747,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439709,,,train,sda-all,samples/GSE315907/GSM9439709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439710,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,800,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,PtenKO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439710,,,train,sda-all,samples/GSE315907/GSM9439710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439711,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,782,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439711,,,train,sda-all,samples/GSE315907/GSM9439711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 0.36}",disease_status;life_stage,low_confidence_annotation
GSM9439712,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,775,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439712,,,train,sda-all,samples/GSE315907/GSM9439712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9439713,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,683,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439713,,,train,sda-all,samples/GSE315907/GSM9439713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9439714,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,693,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439714,,,train,sda-all,samples/GSE315907/GSM9439714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM9439715,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,801,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439715,,,train,sda-all,samples/GSE315907/GSM9439715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.6900000000000001}",,
GSM9439716,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,756,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439716,,,train,sda-all,samples/GSE315907/GSM9439716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM9439717,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,905,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439717,,,train,sda-all,samples/GSE315907/GSM9439717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.63}",disease_status,low_confidence_annotation
GSM9439718,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,852,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439718,,,train,sda-all,samples/GSE315907/GSM9439718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.35000000000000003}",life_stage,low_confidence_annotation
GSM9439719,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,812,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439719,,,train,sda-all,samples/GSE315907/GSM9439719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439720,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,751,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439720,,,train,sda-all,samples/GSE315907/GSM9439720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439721,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,702,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439721,,,train,sda-all,samples/GSE315907/GSM9439721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439722,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,714,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439722,,,train,sda-all,samples/GSE315907/GSM9439722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439723,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,725,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439723,,,train,sda-all,samples/GSE315907/GSM9439723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439724,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,859,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439724,,,train,sda-all,samples/GSE315907/GSM9439724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439725,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,759,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439725,,,train,sda-all,samples/GSE315907/GSM9439725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439726,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,787,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439726,,,train,sda-all,samples/GSE315907/GSM9439726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439727,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,781,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,p53KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439727,,,train,sda-all,samples/GSE315907/GSM9439727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439728,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,651,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439728,,,train,sda-all,samples/GSE315907/GSM9439728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.46}",life_stage,low_confidence_annotation
GSM9439729,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,655,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439729,,,train,sda-all,samples/GSE315907/GSM9439729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9439730,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,650,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439730,,,train,sda-all,samples/GSE315907/GSM9439730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 0.48}",disease_status;life_stage,low_confidence_annotation
GSM9439731,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,681,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439731,,,train,sda-all,samples/GSE315907/GSM9439731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 0.58}",life_stage,low_confidence_annotation
GSM9439732,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,juvenile,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,706,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,juvenile,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439732,,,train,sda-all,samples/GSE315907/GSM9439732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.32}",life_stage,low_confidence_annotation
GSM9439733,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,adult,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,676,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,adult,Young,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439733,,,train,sda-all,samples/GSE315907/GSM9439733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9439734,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,789,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439734,,,train,sda-all,samples/GSE315907/GSM9439734,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439735,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,719,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439735,,,train,sda-all,samples/GSE315907/GSM9439735,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439736,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,698,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439736,,,train,sda-all,samples/GSE315907/GSM9439736,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439737,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,859,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439737,,,train,sda-all,samples/GSE315907/GSM9439737,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439738,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,860,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439738,,,train,sda-all,samples/GSE315907/GSM9439738,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439739,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,888,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439739,,,train,sda-all,samples/GSE315907/GSM9439739,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439740,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,male,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,839,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Rosa26KO,luna,aged,Old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439740,,,train,sda-all,samples/GSE315907/GSM9439740,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439741,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1354,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439741,,,train,sda-all,samples/GSE315907/GSM9439741,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439742,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,957,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439742,,,train,sda-all,samples/GSE315907/GSM9439742,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439743,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,872,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439743,,,train,sda-all,samples/GSE315907/GSM9439743,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439744,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,890,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439744,,,train,sda-all,samples/GSE315907/GSM9439744,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439745,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,986,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439745,,,train,sda-all,samples/GSE315907/GSM9439745,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439746,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,912,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439746,,,train,sda-all,samples/GSE315907/GSM9439746,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439747,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,846,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439747,,,train,sda-all,samples/GSE315907/GSM9439747,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439748,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,860,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439748,,,train,sda-all,samples/GSE315907/GSM9439748,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439749,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1270,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439749,,,train,sda-all,samples/GSE315907/GSM9439749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439750,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,968,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439750,,,train,sda-all,samples/GSE315907/GSM9439750,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439751,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1001,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439751,,,train,sda-all,samples/GSE315907/GSM9439751,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439752,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,822,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439752,,,train,sda-all,samples/GSE315907/GSM9439752,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439753,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,889,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439753,,,train,sda-all,samples/GSE315907/GSM9439753,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439754,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,916,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439754,,,train,sda-all,samples/GSE315907/GSM9439754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439755,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,817,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439755,,,train,sda-all,samples/GSE315907/GSM9439755,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439756,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,872,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,HDM,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439756,,,train,sda-all,samples/GSE315907/GSM9439756,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439757,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1100,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439757,,,train,sda-all,samples/GSE315907/GSM9439757,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439758,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,981,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439758,,,train,sda-all,samples/GSE315907/GSM9439758,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9439759,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,855,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439759,,,train,sda-all,samples/GSE315907/GSM9439759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439760,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,894,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439760,,,train,sda-all,samples/GSE315907/GSM9439760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9439761,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,878,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439761,,,train,sda-all,samples/GSE315907/GSM9439761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9439762,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,907,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439762,,,train,sda-all,samples/GSE315907/GSM9439762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9439763,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,836,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439763,,,train,sda-all,samples/GSE315907/GSM9439763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439764,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,887,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439764,,,train,sda-all,samples/GSE315907/GSM9439764,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9439765,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,823,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439765,,,train,sda-all,samples/GSE315907/GSM9439765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439766,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,858,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439766,,,train,sda-all,samples/GSE315907/GSM9439766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9439767,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,738,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439767,,,train,sda-all,samples/GSE315907/GSM9439767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9439768,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,743,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439768,,,train,sda-all,samples/GSE315907/GSM9439768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9439769,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,796,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439769,,,train,sda-all,samples/GSE315907/GSM9439769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439770,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,798,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439770,,,train,sda-all,samples/GSE315907/GSM9439770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9439771,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,744,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439771,,,train,sda-all,samples/GSE315907/GSM9439771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439772,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,704,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439772,,,train,sda-all,samples/GSE315907/GSM9439772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9439773,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,678,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,aged,Old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439773,,,train,sda-all,samples/GSE315907/GSM9439773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9439774,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1004,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439774,,,train,sda-all,samples/GSE315907/GSM9439774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9439775,liver,normal,,liver,primary tissue,Mus musculus,house mouse,juvenile,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,981,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,juvenile,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439775,,,train,sda-all,samples/GSE315907/GSM9439775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM9439776,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1067,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439776,,,train,sda-all,samples/GSE315907/GSM9439776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.31}",life_stage,low_confidence_annotation
GSM9439777,liver,normal,,liver,primary tissue,Mus musculus,house mouse,juvenile,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1027,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,juvenile,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439777,,,train,sda-all,samples/GSE315907/GSM9439777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.26}",life_stage,low_confidence_annotation
GSM9439778,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,997,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439778,,,train,sda-all,samples/GSE315907/GSM9439778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM9439779,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,945,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439779,,,train,sda-all,samples/GSE315907/GSM9439779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9439780,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,998,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439780,,,train,sda-all,samples/GSE315907/GSM9439780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.5700000000000001}",life_stage,low_confidence_annotation
GSM9439781,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1032,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439781,,,train,sda-all,samples/GSE315907/GSM9439781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9439782,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1027,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439782,,,train,sda-all,samples/GSE315907/GSM9439782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.81}",,
GSM9439783,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,964,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439783,,,train,sda-all,samples/GSE315907/GSM9439783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.49}",life_stage,low_confidence_annotation
GSM9439784,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1037,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439784,,,train,sda-all,samples/GSE315907/GSM9439784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9439785,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,902,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439785,,,train,sda-all,samples/GSE315907/GSM9439785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9439786,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,1017,p53 maintains healthy aging,GSE315907,GSE315907,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,whole liver,,luna,,Veh,luna,adult,Young,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,,,GSM9439786,,,train,sda-all,samples/GSE315907/GSM9439786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM9450633,skin,disease,mesenchymal cell neoplasm,zone of skin,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,415565,TGFβ1 and Oncostatin M promotes the organization of two distinct stromal niches controlling different EMT states [Xenium],GSE316346,GSE316346,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0002616,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,13780,counts,um,1.0,verified,0.49998968391516047,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9450633,,,train,sda-all,samples/GSE316346/GSM9450633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9927082,skin,disease,mesenchymal cell neoplasm,zone of skin,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,821319,TGFβ1 and Oncostatin M promotes the organization of two distinct stromal niches controlling different EMT states [Xenium],GSE316346,GSE316346,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0002616,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,13780,counts,um,1.0,verified,0.4999868987202118,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9927082,,,train,sda-all,samples/GSE316346/GSM9927082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9451441,skin,disease,melanoma;neurofibromatosis type 1,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19297,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105;MONDO:0018975,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451441,,,train,sda-all,samples/GSE316387/GSM9451441,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9451442,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,136728,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000038076588338,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451442,,,train,sda-all,samples/GSE316387/GSM9451442,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM9451444,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,140949,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999961908493318,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451444,,,train,sda-all,samples/GSE316387/GSM9451444,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9451445,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,86282,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49999183397935637,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451445,,,train,sda-all,samples/GSE316387/GSM9451445,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9451447,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,102723,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000038133007931,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451447,,,train,sda-all,samples/GSE316387/GSM9451447,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9451448,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,101400,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49999891096009763,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451448,,,train,sda-all,samples/GSE316387/GSM9451448,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9451450,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,106573,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999901973598222,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451450,,,train,sda-all,samples/GSE316387/GSM9451450,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9451453,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,73412,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000120606478291,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451453,,,train,sda-all,samples/GSE316387/GSM9451453,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9451454,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,44029,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000080201649862,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451454,,,train,sda-all,samples/GSE316387/GSM9451454,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9451455,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,17548,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000068194217131,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451455,,,train,sda-all,samples/GSE316387/GSM9451455,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.87, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9451456,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,47962,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49998972715318857,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451456,,,train,sda-all,samples/GSE316387/GSM9451456,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9451457,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,27031,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000485685071575,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451457,,,train,sda-all,samples/GSE316387/GSM9451457,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.88, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9451458,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,57936,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000029550827423,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451458,,,train,sda-all,samples/GSE316387/GSM9451458,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9451459,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,103598,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.49999926114197885,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451459,,,train,sda-all,samples/GSE316387/GSM9451459,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.89, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9451460,skin,disease,melanoma,skin of body,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,52716,Xenium Analysis of Melanoma FFPE,GSE316387,GSE316387,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Melanoma,MONDO:0005105,luna,,No_Treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000054456739567,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9451460,,,train,sda-all,samples/GSE316387/GSM9451460,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.85, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9451525,blood vessel,disease,,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,725,Single Cell and Spatial Transcriptomics Identify Novel Immune-Stromal Interactions in Cardiac Allograft Vasculopathy,GSE316390,GSE316390,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.9080483329398836,platform_constant,3.9080483329398836,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9451525,,,train,hesrt,samples/GSE316390/GSM9451525,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9451526,blood vessel,disease,,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4261,Single Cell and Spatial Transcriptomics Identify Novel Immune-Stromal Interactions in Cardiac Allograft Vasculopathy,GSE316390,GSE316390,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.4866204968552656,platform_constant,3.4866204968552656,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,,,GSM9451526,,,train,hesrt,samples/GSE316390/GSM9451526,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.73, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9451527,blood vessel,disease,,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4779,Single Cell and Spatial Transcriptomics Identify Novel Immune-Stromal Interactions in Cardiac Allograft Vasculopathy,GSE316390,GSE316390,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.5017502136341125,platform_constant,3.5017502136341125,HESRT_HUMAN_REVIEW,,,image_partial_coverage,,human_visual_review,,,,,,GSM9451527,,,train,hesrt,samples/GSE316390/GSM9451527,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9451528,blood vessel,disease,,coronary artery,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3146,Single Cell and Spatial Transcriptomics Identify Novel Immune-Stromal Interactions in Cardiac Allograft Vasculopathy,GSE316390,GSE316390,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,human coronary artery,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.9080483329398836,platform_constant,3.9080483329398836,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9451528,,,train,hesrt,samples/GSE316390/GSM9451528,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9456973,colon,disease,colon adenoma,colonic epithelium,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,99258,Clonal memory of colitis accumulates and promotes tumor growth [Visium],GSE316618,GSE316618,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000397,colon,MONDO:0000527,luna,adenoma,control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19059,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41882356,,GSM9456973,,,train,hesrt,samples/GSE316618/GSM9456973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.71, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9456974,colon,disease,colon adenoma;colitis,colonic epithelium,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,99154,Clonal memory of colitis accumulates and promotes tumor growth [Visium],GSE316618,GSE316618,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000397,colon,MONDO:0000527;MONDO:0005292,luna,adenoma,colitis recovered,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,19059,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41882356,,GSM9456974,,,train,hesrt,samples/GSE316618/GSM9456974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9457930,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,139806,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,GSE316662,GSE316662,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Uterus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.5000137249519626,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457930,,,train,sda-all,samples/GSE316662/GSM9457930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9457931,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,125554,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,GSE316662,GSE316662,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Uterus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.5000325922876355,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457931,,,train,sda-all,samples/GSE316662/GSM9457931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9457932,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,214768,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,GSE316662,GSE316662,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Uterus,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.5000257785110332,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457932,,,train,sda-all,samples/GSE316662/GSM9457932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM9457933,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,221278,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,GSE316662,GSE316662,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Uterus,,luna,,,luna,neonatal or infant,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.4999974216171617,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457933,,,train,sda-all,samples/GSE316662/GSM9457933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM9457934,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,389349,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,GSE316662,GSE316662,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Uterus,,luna,,,luna,neonatal or infant,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.4999911420810204,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457934,,,train,sda-all,samples/GSE316662/GSM9457934,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM9457935,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,367168,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,GSE316662,GSE316662,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Uterus,,luna,,,luna,neonatal or infant,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.4999984107812599,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457935,,,train,sda-all,samples/GSE316662/GSM9457935,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.45}",life_stage,low_confidence_annotation
GSM9457936,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,462894,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,GSE316662,GSE316662,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Uterus,,luna,,,luna,neonatal or infant,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.4999864864864865,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457936,,,train,sda-all,samples/GSE316662/GSM9457936,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.56}",life_stage,low_confidence_annotation
GSM9457937,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,541215,Spatial Transcriptomic Mapping of Postnatal Mouse Uterine Development,GSE316662,GSE316662,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,Uterus,,luna,,,luna,neonatal or infant,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,mMulti_480g,xenium-3.0.0.15,cell,541,counts,um,1.0,verified,0.5000125502008033,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42406946,,GSM9457937,,,train,sda-all,samples/GSE316662/GSM9457937,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM9459774,skin,disease,cutaneous melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4084,Spatial transcriptomics of primary cutaneous melanoma,GSE316760,GSE316760,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Cutaneous melanoma,MONDO:0005012,luna,melanoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.026776726360003,platform_constant,4.026776726360003,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9459774,,,val,hesrt,samples/GSE316760/GSM9459774,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9459775,skin,disease,cutaneous melanoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4949,Spatial transcriptomics of primary cutaneous melanoma,GSE316760,GSE316760,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Cutaneous melanoma,MONDO:0005012,luna,melanoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.026559828084776,platform_constant,4.026559828084776,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9459775,,,val,hesrt,samples/GSE316760/GSM9459775,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9460277,plant,perturbation,,,primary tissue,Solanum lycopersicum,tomato,not stated,unknown,Other,not named in GEO,False,,7101,A long-read-compatible spatial barcoding system: enables isoform-resolved spatial heterogeneity at near-single-cell scale.,GSE316789,GSE316789,4081,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,luna,,Graft interface,,luna,,Grafting,luna,not stated,,not stated,,,,,,release v3,sequencing-based,other,,,bin,83029,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM9460277,,,train,sda-all,samples/GSE316789/GSM9460277,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 0.87, ""disease_status"": 0.43, ""uberon"": NaN, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460278,plant,normal,,,primary tissue,Solanum lycopersicum,tomato,not stated,unknown,Other,not named in GEO,False,,7101,A long-read-compatible spatial barcoding system: enables isoform-resolved spatial heterogeneity at near-single-cell scale.,GSE316789,GSE316789,4081,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,luna,,Graft interface,,luna,,Grafting,luna,not stated,,not stated,,,,,,release v3,sequencing-based,other,,,bin,83027,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM9460278,,,train,sda-all,samples/GSE316789/GSM9460278,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.33, ""uberon"": NaN, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9460279,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Other,not named in GEO,False,,53691,A long-read-compatible spatial barcoding system: enables isoform-resolved spatial heterogeneity at near-single-cell scale.,GSE316789,GSE316789,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,Wild type,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,other,,,bin,54838,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM9460279,,,train,sda-all,samples/GSE316789/GSM9460279,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.55, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9460280,embryo (whole),normal,,embryo,whole embryo/organism,Mus musculus,house mouse,embryonic,unknown,Other,not named in GEO,False,,51277,A long-read-compatible spatial barcoding system: enables isoform-resolved spatial heterogeneity at near-single-cell scale.,GSE316789,GSE316789,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000922,Embryo,,luna,,Wild type,luna,embryonic,,not stated,,,,,,release v3,sequencing-based,other,,,bin,54752,counts,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM9460280,,,train,sda-all,samples/GSE316789/GSM9460280,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.53, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9460386,breast,disease,neoplasm,mammary gland,xenograft,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1216979,Stretching inhibits tumor growth in MMTV-PYMT via a direct mechanical effect,GSE316800,GSE316800,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001911,mammary tumor,MONDO:0005070,luna,,Stretch and No Stretch,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000076166434541,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9460386,,,train,sda-all,samples/GSE316800/GSM9460386,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9462339,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,467803,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,GSE316917,GSE316917,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,,MONDO:0850335;MONDO:0021211,luna,,,age rule: bare number read as years,adult,50,extracted field,Male,GSE316917:GBM024,GBM024,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499996522222995,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462339,,,train,sda-all,samples/GSE316917/GSM9462339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9462340,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,366739,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,GSE316917,GSE316917,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,,MONDO:0850335;MONDO:0021211,luna,,,age rule: bare number read as years,adult,50,extracted field,Male,GSE316917:GBM024,GBM024,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999850906488547,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462340,,,train,sda-all,samples/GSE316917/GSM9462340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9462341,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,54166,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,GSE316917,GSE316917,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,,MONDO:0850335;MONDO:0021211,luna,,,age rule: bare number read as years,adult,50,extracted field,Male,GSE316917:GBM024,GBM024,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999941023826374,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462341,,,train,sda-all,samples/GSE316917/GSM9462341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9462342,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,711466,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,GSE316917,GSE316917,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,,MONDO:0850335;MONDO:0021211,luna,,,age rule: bare number read as years,adult,50,extracted field,Male,GSE316917:GBM024,GBM024,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999386623484965,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462342,,,train,sda-all,samples/GSE316917/GSM9462342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9462343,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,213970,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,GSE316917,GSE316917,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,,MONDO:0850335;MONDO:0021211,luna,,,age rule: bare number read as years,aged,68,extracted field,Male,GSE316917:GBM030,GBM030,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000185935046689,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462343,,,train,sda-all,samples/GSE316917/GSM9462343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9462344,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,80375,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,GSE316917,GSE316917,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,,MONDO:0850335;MONDO:0021211,luna,,,age rule: bare number read as years,aged,68,extracted field,Male,GSE316917:GBM026,GBM026,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896694214877,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462344,,,train,sda-all,samples/GSE316917/GSM9462344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9462345,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,163126,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,GSE316917,GSE316917,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,,MONDO:0850335;MONDO:0021211,luna,,,age rule: bare number read as years,aged,65,extracted field,Male,GSE316917:GBM034,GBM034,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000028191249436,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462345,,,train,sda-all,samples/GSE316917/GSM9462345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9462346,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,102625,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,GSE316917,GSE316917,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,,MONDO:0850335;MONDO:0021211,luna,,,age rule: bare number read as years,aged,68,extracted field,Male,GSE316917:GBM026,GBM026,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999630461774963,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462346,,,train,sda-all,samples/GSE316917/GSM9462346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9462347,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,117714,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions,GSE316917,GSE316917,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,,MONDO:0850335;MONDO:0021211,luna,,,age rule: bare number read as years,aged,73,extracted field,Male,GSE316917:GBM025,GBM025,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999972427484283,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9462347,,,train,sda-all,samples/GSE316917/GSM9462347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9464516,small intestine,normal,,ileum,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Stereo-seq,Stereo-seq,False,,25224,"Single-nucleus and Spatial Transcriptomics Reveal Intestinal Cellular Heterogeneity, Differentiation, and Cell Communication Mechanisms in SAP-induced Intestinal Injury [Spatial Transcriptomics]",GSE317062,GSE317062+GSE317063,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0002116,ileum,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,27439,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41694378,,GSM9464516,,,train,sda-all,samples/GSE317062/GSM9464516,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9464517,small intestine,disease,,ileum,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Stereo-seq,Stereo-seq,False,,15207,"Single-nucleus and Spatial Transcriptomics Reveal Intestinal Cellular Heterogeneity, Differentiation, and Cell Communication Mechanisms in SAP-induced Intestinal Injury [Spatial Transcriptomics]",GSE317062,GSE317062+GSE317063,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0002116,ileum,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,25921,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41694378,,GSM9464517,,,train,sda-all,samples/GSE317062/GSM9464517,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9464518,small intestine,disease,,ileum,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Stereo-seq,Stereo-seq,False,,23840,"Single-nucleus and Spatial Transcriptomics Reveal Intestinal Cellular Heterogeneity, Differentiation, and Cell Communication Mechanisms in SAP-induced Intestinal Injury [Spatial Transcriptomics]",GSE317062,GSE317062+GSE317063,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0002116,ileum,,luna,,SAP,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,26958,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41694378,,GSM9464518,,,train,sda-all,samples/GSE317062/GSM9464518,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9464519,small intestine,disease,,ileum,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Stereo-seq,Stereo-seq,False,,22966,"Single-nucleus and Spatial Transcriptomics Reveal Intestinal Cellular Heterogeneity, Differentiation, and Cell Communication Mechanisms in SAP-induced Intestinal Injury [Spatial Transcriptomics]",GSE317062,GSE317062+GSE317063,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0002116,ileum,,luna,,SAP,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,26644,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,41694378,,GSM9464519,,,train,sda-all,samples/GSE317062/GSM9464519,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9465382,blood vessel,perturbation,,iliac artery,primary tissue,Oryctolagus cuniculus,rabbit,not stated,unknown,Stereo-seq,Stereo-seq,False,,4565,A generative AI-designed vascular liner prevents restenosis,GSE317119,GSE317119,9986,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,luna,UBERON:0005609,iliac artery,,luna,,G/GM/P-S@H group,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,17329,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9465382,,,train,sda-all,samples/GSE317119/GSM9465382,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.45, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9465383,blood vessel,perturbation,,iliac artery,primary tissue,Oryctolagus cuniculus,rabbit,not stated,unknown,Stereo-seq,Stereo-seq,False,,5258,A generative AI-designed vascular liner prevents restenosis,GSE317119,GSE317119,9986,Oryctolagus cuniculus,9986,,False,False,GEO organism field,Oryctolagus cuniculus,Oryctolagus cuniculus,luna,UBERON:0005609,iliac artery,,luna,,BRS group,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,21033,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9465383,,,train,sda-all,samples/GSE317119/GSM9465383,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9467249,kidney,disease,kidney disorder;type 2 diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,46971,HIF regulatory network reflects kidney disease progression in diabetes and reversal with SGLT2 inhibition,GSE317226,GSE317226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240;MONDO:0005148,luna,type 2 diabetes,pre-SGLT2i,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,37082,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42009641,,GSM9467249,,,val,hesrt,samples/GSE317226/GSM9467249,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9467250,kidney,disease,kidney disorder;type 2 diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,53169,HIF regulatory network reflects kidney disease progression in diabetes and reversal with SGLT2 inhibition,GSE317226,GSE317226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240;MONDO:0005148,luna,type 2 diabetes,pre-SGLT2i,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,37082,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42009641,,GSM9467250,,,val,hesrt,samples/GSE317226/GSM9467250,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9467251,kidney,disease,kidney disorder;type 2 diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,40388,HIF regulatory network reflects kidney disease progression in diabetes and reversal with SGLT2 inhibition,GSE317226,GSE317226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240;MONDO:0005148,luna,type 2 diabetes,pre-SGLT2i,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,37082,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42009641,,GSM9467251,,,val,hesrt,samples/GSE317226/GSM9467251,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9467252,kidney,disease,kidney disorder;type 2 diabetes mellitus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,77982,HIF regulatory network reflects kidney disease progression in diabetes and reversal with SGLT2 inhibition,GSE317226,GSE317226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0005240;MONDO:0005148,luna,type 2 diabetes,pre-SGLT2i,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,37082,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42009641,,GSM9467252,,,val,hesrt,samples/GSE317226/GSM9467252,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9468882,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,21403,Multicellular origins of ovarian inflammaging [Spatial Transcriptomics],GSE317297,GSE317297,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,ovary,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,slide-seq,,,bead,21091,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9468882,,,train,sda-all,samples/GSE317297/GSM9468882,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9468883,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,10267,Multicellular origins of ovarian inflammaging [Spatial Transcriptomics],GSE317297,GSE317297,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,ovary,,luna,,,luna,aged,,not stated,,,,,,release v3,sequencing-based,slide-seq,,,bead,18394,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9468883,,,train,sda-all,samples/GSE317297/GSM9468883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9471154,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,160995,spaTransfer: transfer learning for single-cell and spatial  transcriptomics data using non-negative matrix factorization,GSE317379,GSE317379,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,dlPFC,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999993914017235,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471154,,,val,sda-all,samples/GSE317379/GSM9471154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.51, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9471155,brain,normal,,brain,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,157073,spaTransfer: transfer learning for single-cell and spatial  transcriptomics data using non-negative matrix factorization,GSE317379,GSE317379,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,dlPFC,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999908745802306,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471155,,,val,sda-all,samples/GSE317379/GSM9471155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9471164,brain,normal,,dentate gyrus of hippocampal formation,primary tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,117594,spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization [DG],GSE317381,GSE317381,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001885,dentate gyrus (DG),,luna,,,luna,adult,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,10496,counts,um,1.0,verified,0.5000108572917572,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471164,,,train,sda-all,samples/GSE317381/GSM9471164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.43}",life_stage,low_confidence_annotation
GSM9471165,brain,normal,,dentate gyrus of hippocampal formation,primary tissue,Homo sapiens,human,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,129304,spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization [DG],GSE317381,GSE317381,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001885,dentate gyrus (DG),,luna,,,luna,neonatal or infant,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,10496,counts,um,1.0,verified,0.500007627931305,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471165,,,train,sda-all,samples/GSE317381/GSM9471165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.86}",disease_status,low_confidence_annotation
GSM9471166,brain,normal,,dentate gyrus of hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,63657,spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization [DG],GSE317381,GSE317381,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001885,dentate gyrus (DG),,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,10496,counts,um,1.0,verified,0.4999888369856426,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471166,,,train,sda-all,samples/GSE317381/GSM9471166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM9471167,brain,normal,,dentate gyrus of hippocampal formation,primary tissue,Homo sapiens,human,aged,unknown,Xenium,Xenium,True,fluorescence: DAPI,221776,spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization [DG],GSE317381,GSE317381,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001885,dentate gyrus (DG),,luna,,,luna,aged,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,10496,counts,um,1.0,verified,0.5000037824752518,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9471167,,,train,sda-all,samples/GSE317381/GSM9471167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.8}",,
GSM9452684,other,disease,biliary tract cancer,biliary tree,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,431,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001173,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:30,30,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.436110943869717,platform_constant,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452684,,,train,hesrt,samples/GSE317606/GSM9452684,sda-tissue-disease-2.3,"{""organ"": 0.41000000000000003, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9452685,unknown,disease,biliary tract cancer,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,145,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:30,30,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.436110943869717,platform_constant,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452685,,,train,hesrt,samples/GSE317606/GSM9452685,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9452686,unknown,disease,biliary tract cancer,biliary tree,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,453,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001173,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:38,38,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.436026429615547,platform_constant,4.436026429615547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452686,,,train,hesrt,samples/GSE317606/GSM9452686,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9452687,unknown,disease,biliary tract cancer,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,245,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:38,38,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.436026429615547,platform_constant,4.436026429615547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452687,,,train,hesrt,samples/GSE317606/GSM9452687,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.99, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9452688,unknown,disease,biliary tract cancer,biliary tree,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,536,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001173,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:41,41,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.436110943869717,platform_constant,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452688,,,train,hesrt,samples/GSE317606/GSM9452688,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9452689,liver,disease,biliary tract cancer,biliary tree,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1040,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001173,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:41,41,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.436110943869717,platform_constant,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452689,,,train,hesrt,samples/GSE317606/GSM9452689,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.46, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9452690,unknown,disease,biliary tract cancer,biliary tree,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,143,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001173,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:42,42,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.436026429615547,platform_constant,4.436026429615547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452690,,,train,hesrt,samples/GSE317606/GSM9452690,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9452691,unknown,disease,biliary tract cancer,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,996,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:42,42,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.436026429615547,platform_constant,4.436026429615547,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452691,,,train,hesrt,samples/GSE317606/GSM9452691,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.55, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9452692,unknown,disease,biliary tract cancer,biliary tree,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,694,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001173,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:43,43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.436110943869717,platform_constant,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452692,,,train,hesrt,samples/GSE317606/GSM9452692,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM9452693,other,disease,biliary tract cancer,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,886,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:43,43,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.436110943869717,platform_constant,4.436110943869717,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452693,,,train,hesrt,samples/GSE317606/GSM9452693,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.78, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9452694,unknown,disease,biliary tract cancer,biliary tree,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1274,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001173,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Pre-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:44,44,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.539455922523668,platform_constant,4.539455922523668,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452694,,,train,hesrt,samples/GSE317606/GSM9452694,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9452695,unknown,disease,biliary tract cancer,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,548,A Phase II Trial of Pembrolizumab plus Granulocyte Macrophage Colony Stimulating Factor in Advanced Biliary Cancer,GSE317606,GSE317606,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Biliary tract cancer (BTC),MONDO:0003060,luna,Biliary tract cancer (BTC),"Post-GM-CSF, post-pembrolizumab",luna,not stated,,not stated,,GSE317606:44,44,,,release v3,sequencing-based,10x Genomics Visium,,,spot,33538,counts,pixel,4.544703416878741,platform_constant,4.544703416878741,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9452695,,,train,hesrt,samples/GSE317606/GSM9452695,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9477704,brain,normal,,olfactory bulb,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Stereo-seq,Stereo-seq,False,,11885,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,GSE317755,GSE317755,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002264,Olfactory Bulb,,luna,,Adult,luna,adult,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,35803,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9477704,,,test,sda-all,samples/GSE317755/GSM9477704,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9477706,brain,normal,,metencephalon,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Stereo-seq,Stereo-seq,False,,6353,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,GSE317755,GSE317755,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0001895,Metencephalon,,luna,,Adult,luna,adult,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,26414,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9477706,,,test,sda-all,samples/GSE317755/GSM9477706,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9477707,brain,normal,,telencephalon,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Stereo-seq,Stereo-seq,False,,5975,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,GSE317755,GSE317755,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0001893,Telencephalon,,luna,,Adult,luna,adult,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,28553,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9477707,,,test,sda-all,samples/GSE317755/GSM9477707,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9477709,brain,normal,,diencephalon,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Stereo-seq,Stereo-seq,False,,15632,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,GSE317755,GSE317755,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0001894,Diencephalon,,luna,,Adult,luna,adult,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,30876,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9477709,,,test,sda-all,samples/GSE317755/GSM9477709,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9477711,brain,normal,,olfactory bulb,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Stereo-seq,Stereo-seq,False,,16101,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,GSE317755,GSE317755,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002264,Olfactory Bulb,,luna,,Metamorphosis,luna,adult,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,29822,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9477711,,,test,sda-all,samples/GSE317755/GSM9477711,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9477713,brain,normal,,diencephalon,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Stereo-seq,Stereo-seq,False,,12099,A spatial transcriptomics comparison of the adult versus metamorphosed axolotl brain,GSE317755,GSE317755,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0001894,Diencephalon,,luna,,Metamorphosis,luna,adult,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,bin,33975,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9477713,,,test,sda-all,samples/GSE317755/GSM9477713,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9483972,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),401,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,GSE317987,GSE317987,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,,non-lesional,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.13871408512286,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483972,,,train,sda-all,samples/GSE317987/GSM9483972,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.55, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9483973,skin,disease,cutaneous leishmaniasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),839,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,GSE317987,GSE317987,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005446,luna,,Clinical infection,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.306494288718998,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483973,,,train,sda-all,samples/GSE317987/GSM9483973,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483974,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),368,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,GSE317987,GSE317987,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,,non-lesional,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.3129480551305965,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483974,,,train,sda-all,samples/GSE317987/GSM9483974,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483975,skin,disease,cutaneous leishmaniasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),544,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,GSE317987,GSE317987,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005446,luna,,Clinical infection,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.301075911841473,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483975,,,train,sda-all,samples/GSE317987/GSM9483975,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.47000000000000003, ""life_stage"": 0.76}",uberon,low_confidence_annotation
GSM9483976,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),243,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,GSE317987,GSE317987,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,,non-lesional,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.17044350616364,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483976,,,train,sda-all,samples/GSE317987/GSM9483976,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6900000000000001, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483977,skin,disease,cutaneous leishmaniasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),870,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,GSE317987,GSE317987,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005446,luna,,Clinical infection,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.173633463431575,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483977,,,train,sda-all,samples/GSE317987/GSM9483977,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483978,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),361,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,GSE317987,GSE317987,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,,non-lesional,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.181553327547662,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483978,,,train,sda-all,samples/GSE317987/GSM9483978,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483979,skin,disease,cutaneous leishmaniasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1199,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,GSE317987,GSE317987,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005446,luna,,Clinical infection,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.166735328951941,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483979,,,train,sda-all,samples/GSE317987/GSM9483979,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9483980,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),215,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,GSE317987,GSE317987,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,,luna,,non-lesional,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.181359736050901,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483980,,,train,sda-all,samples/GSE317987/GSM9483980,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9483981,skin,disease,cutaneous leishmaniasis,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),538,Spatial mapping of Ethiopian cutaneous leishmaniasis lesions reveals patient-defined immune signatures,GSE317987,GSE317987,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005446,luna,,Clinical infection,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.299931232567945,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42553130,,GSM9483981,,,train,sda-all,samples/GSE317987/GSM9483981,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9485172,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3458,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,GSE318039,GSE318039,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.464700034336645,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485172,,,train,sda-all,samples/GSE318039/GSM9485172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9485173,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2599,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,GSE318039,GSE318039,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.65565986147375,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485173,,,train,sda-all,samples/GSE318039/GSM9485173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9485174,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3604,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,GSE318039,GSE318039,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.496968982513409,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485174,,,train,sda-all,samples/GSE318039/GSM9485174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9485175,lung,disease,chronic obstructive pulmonary disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2129,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,GSE318039,GSE318039,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005002,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.559734645630225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485175,,,train,sda-all,samples/GSE318039/GSM9485175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9485176,lung,disease,chronic obstructive pulmonary disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1872,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,GSE318039,GSE318039,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005002,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.657920273838276,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485176,,,train,sda-all,samples/GSE318039/GSM9485176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9485177,lung,disease,chronic obstructive pulmonary disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1945,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,GSE318039,GSE318039,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005002,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.654540507263224,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485177,,,train,sda-all,samples/GSE318039/GSM9485177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9485178,lung,disease,chronic obstructive pulmonary disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1314,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,GSE318039,GSE318039,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005002,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.471264751788277,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485178,,,train,sda-all,samples/GSE318039/GSM9485178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9485179,lung,disease,chronic obstructive pulmonary disease,lung,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2867,Spatial Transcriptomics Reveals Compartment-Specific Cytotoxic T cells Crosstalk with AT2 and Goblet cells in Advanced COPD,GSE318039,GSE318039,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0005002,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.669789570079985,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42351239,,GSM9485179,,,train,sda-all,samples/GSE318039/GSM9485179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9489187,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,68239,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",GSE318202,GSE318202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain (embryonic coronal brain sections containing the lateral ventricles),,luna,,Pregnant mice were intraperitoneally administered 200 µL of 0.1% BSA in PBS 48 hours prior to collection.,luna,embryonic,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.49998455942904196,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489187,,,train,sda-all,samples/GSE318202/GSM9489187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.44, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9489188,brain,normal,,telencephalic ventricle,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,60038,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",GSE318202,GSE318202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002285,Brain (embryonic coronal brain sections containing the lateral ventricles),,luna,,Pregnant mice were intraperitoneally administered 200 µL of 0.1% BSA in PBS 48 hours prior to collection.,luna,embryonic,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999982827311444,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489188,,,train,sda-all,samples/GSE318202/GSM9489188,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 0.48, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9489189,brain,normal,,telencephalic ventricle,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,65647,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",GSE318202,GSE318202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002285,Brain (embryonic coronal brain sections containing the lateral ventricles),,luna,,Pregnant mice were intraperitoneally administered 200 µL of 0.1% BSA in PBS 48 hours prior to collection.,luna,embryonic,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000325922876355,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489189,,,train,sda-all,samples/GSE318202/GSM9489189,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9489190,brain,normal,,telencephalic ventricle,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,88276,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",GSE318202,GSE318202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002285,Brain (embryonic coronal brain sections containing the lateral ventricles),,luna,,CD1,luna,embryonic,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,541,counts,um,1.0,verified,0.4999837892006602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489190,,,train,sda-all,samples/GSE318202/GSM9489190,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.42, ""life_stage"": 0.86}",uberon,low_confidence_annotation
GSM9489191,brain,normal,,telencephalic ventricle,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,90497,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",GSE318202,GSE318202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002285,Brain (embryonic coronal brain sections containing the lateral ventricles),,luna,,CD1,luna,embryonic,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,541,counts,um,1.0,verified,0.500027960913586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489191,,,train,sda-all,samples/GSE318202/GSM9489191,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.56, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM9489192,brain,normal,,telencephalic ventricle,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,83672,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",GSE318202,GSE318202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002285,Brain (embryonic coronal brain sections containing the lateral ventricles),,luna,,CD1,luna,embryonic,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,541,counts,um,1.0,verified,0.49997202261750495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489192,,,train,sda-all,samples/GSE318202/GSM9489192,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.33, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9489193,brain,normal,,telencephalic ventricle,primary tissue,Mus musculus,house mouse,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,81207,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",GSE318202,GSE318202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002285,Brain (embryonic coronal brain sections containing the lateral ventricles),,luna,,CD1,luna,embryonic,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,mBrain_100g,xenium-3.1.0.4,cell,541,counts,um,1.0,verified,0.50000589066918,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489193,,,train,sda-all,samples/GSE318202/GSM9489193,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.7000000000000001, ""life_stage"": 0.99}",,
GSM9489194,brain,normal,,telencephalic ventricle,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,128498,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",GSE318202,GSE318202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002285,Brain (postnatal coronal brain sections containing the lateral ventricles),,luna,,C57BL/6,luna,neonatal or infant,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.4999793255536157,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489194,,,train,sda-all,samples/GSE318202/GSM9489194,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9489195,brain,normal,,telencephalic ventricle,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,98395,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",GSE318202,GSE318202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002285,Brain (postnatal coronal brain sections containing the lateral ventricles),,luna,,C57BL/6,luna,neonatal or infant,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.500012636706185,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489195,,,train,sda-all,samples/GSE318202/GSM9489195,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9489196,brain,normal,,telencephalic ventricle,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,True,fluorescence: DAPI,115387,"Single-cell multiomic approaches define a gradual, spatially-regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells [Xenium]",GSE318202,GSE318202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002285,Brain (postnatal coronal brain sections containing the lateral ventricles),,luna,,C57BL/6,luna,neonatal or infant,,not stated,,,,fixed frozen,fixed frozen,release v3,imaging-based,Xenium,mBrain_100g,xenium-2.0.0.10,cell,541,counts,um,1.0,verified,0.5000193718359335,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42314674,,GSM9489196,,,train,sda-all,samples/GSE318202/GSM9489196,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9490659,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1079,Spatially resolved gene expression and tumour-microenvironment interactions across malignant transformation in IDH-mutant glioma,GSE318238,GSE318238,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,astrocytoma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,18085,counts,um,1.0,verified,2.1032071938454493,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9490659,,,train,sda-all,samples/GSE318238/GSM9490659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9490660,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4451,Spatially resolved gene expression and tumour-microenvironment interactions across malignant transformation in IDH-mutant glioma,GSE318238,GSE318238,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,astrocytoma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,18085,counts,um,1.0,verified,8.691450560917144,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9490660,,,train,sda-all,samples/GSE318238/GSM9490660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9490661,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,729,Spatially resolved gene expression and tumour-microenvironment interactions across malignant transformation in IDH-mutant glioma,GSE318238,GSE318238,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,astrocytoma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,18085,counts,um,1.0,verified,2.989066375358949,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9490661,,,train,sda-all,samples/GSE318238/GSM9490661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9494074,brain,normal,,hypothalamus,primary tissue,Mus musculus,house mouse,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,75528,Transcriptomic Landscape of Microglia in Mouse Models of Social Dysfunction and Oxytocin-Mediated Recovery,GSE318415,GSE318415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001898,Hypothalamus of brain,,luna,,healthy conrol,luna,juvenile,,extracted field,male,,,,,release v3,imaging-based,Xenium,,,cell,13459,counts,um,1.0,verified,0.4999914816978193,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9494074,,,test,sda-all,samples/GSE318415/GSM9494074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9494075,brain,perturbation,,hypothalamus,primary tissue,Mus musculus,house mouse,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,63216,Transcriptomic Landscape of Microglia in Mouse Models of Social Dysfunction and Oxytocin-Mediated Recovery,GSE318415,GSE318415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001898,Hypothalamus of brain,,luna,,VPA-treated,luna,juvenile,,extracted field,male,,,,,release v3,imaging-based,Xenium,,,cell,13459,counts,um,1.0,verified,0.4999954820054732,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9494075,,,test,sda-all,samples/GSE318415/GSM9494075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9494076,brain,perturbation,,hypothalamus,primary tissue,Mus musculus,house mouse,juvenile,male,Xenium,Xenium,True,fluorescence: DAPI,37269,Transcriptomic Landscape of Microglia in Mouse Models of Social Dysfunction and Oxytocin-Mediated Recovery,GSE318415,GSE318415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001898,Hypothalamus of brain,,luna,,VPA-treated,luna,juvenile,,extracted field,male,,,,,release v3,imaging-based,Xenium,,,cell,13459,counts,um,1.0,verified,0.5000036492798755,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9494076,,,test,sda-all,samples/GSE318415/GSM9494076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9496850,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,329439,Evaluating exon skipping in the central nervous system in Duchenne muscular dystrophy using spatial transcriptomics,GSE318507,GSE318507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: postnatal day,adult,P98,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500011932035128,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42542656,,GSM9496850,,,train,sda-all,samples/GSE318507/GSM9496850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9496851,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,317630,Evaluating exon skipping in the central nervous system in Duchenne muscular dystrophy using spatial transcriptomics,GSE318507,GSE318507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: postnatal day,adult,P98,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999887845952102,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42542656,,GSM9496851,,,train,sda-all,samples/GSE318507/GSM9496851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9496852,brain,disease,neuromuscular disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,329560,Evaluating exon skipping in the central nervous system in Duchenne muscular dystrophy using spatial transcriptomics,GSE318507,GSE318507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0019056,mondo_predicate,,,age rule: postnatal day,adult,P98,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000079729557341,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42542656,,GSM9496852,,,train,sda-all,samples/GSE318507/GSM9496852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9496853,brain,not stated,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,147850,Evaluating exon skipping in the central nervous system in Duchenne muscular dystrophy using spatial transcriptomics,GSE318507,GSE318507,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: postnatal day,adult,P98,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,297,counts,um,1.0,verified,0.5000109346224677,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42542656,,GSM9496853,,,train,sda-all,samples/GSE318507/GSM9496853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9497186,lung,normal,,lung,primary tissue,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1888,Targeting the lipid metabolism proteins FASN and GPAM in alveolar type II cells decreases lung metastasis,GSE318532,GSE318532,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,control,age rule: age with unit,not stated,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.001929342701519,platform_constant,4.001929342701519,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41778850,,GSM9497186,,,train,hesrt,samples/GSE318532/GSM9497186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9497187,lung,disease,neoplasm,lung,metastasis,Mus musculus,house mouse,adult,female,Visium,Visium,True,H&E,1110,Targeting the lipid metabolism proteins FASN and GPAM in alveolar type II cells decreases lung metastasis,GSE318532,GSE318532,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0005070,luna,,lung metastasis,age rule: age with unit,not stated,6–8 weeks,extracted field,female,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,3.9877920481219724,platform_constant,3.9877920481219724,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41778850,,GSM9497187,,,train,hesrt,samples/GSE318532/GSM9497187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9497611,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4031,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.123420547809209,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497611,,,train,sda-all,samples/GSE318562/GSM9497611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497612,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3018,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.1192507545040975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497612,,,train,sda-all,samples/GSE318562/GSM9497612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497613,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2522,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.226988768629871,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497613,,,train,sda-all,samples/GSE318562/GSM9497613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497614,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2138,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.233846191348708,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497614,,,train,sda-all,samples/GSE318562/GSM9497614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497615,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2531,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.122052162284867,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497615,,,train,sda-all,samples/GSE318562/GSM9497615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497616,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1944,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.120783240854034,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497616,,,train,sda-all,samples/GSE318562/GSM9497616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497617,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1639,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.490323146105986,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497617,,,train,sda-all,samples/GSE318562/GSM9497617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497618,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1202,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.487135095373426,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497618,,,train,sda-all,samples/GSE318562/GSM9497618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9497619,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1346,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.459993560210665,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497619,,,train,sda-all,samples/GSE318562/GSM9497619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497620,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1420,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.146759727719594,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497620,,,train,sda-all,samples/GSE318562/GSM9497620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497621,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,689,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.196532210411193,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497621,,,train,sda-all,samples/GSE318562/GSM9497621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497622,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,821,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.207123878056208,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497622,,,train,sda-all,samples/GSE318562/GSM9497622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497623,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2461,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.263252838668825,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497623,,,train,sda-all,samples/GSE318562/GSM9497623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497624,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1787,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.257705519621639,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497624,,,train,sda-all,samples/GSE318562/GSM9497624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497625,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2850,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.259097350149497,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497625,,,train,sda-all,samples/GSE318562/GSM9497625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9497626,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2915,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.491451110707379,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497626,,,train,sda-all,samples/GSE318562/GSM9497626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497627,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3194,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.262921542308013,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497627,,,train,sda-all,samples/GSE318562/GSM9497627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497628,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3995,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.525349270022658,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497628,,,train,sda-all,samples/GSE318562/GSM9497628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9497629,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1919,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.26108505695897,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497629,,,train,sda-all,samples/GSE318562/GSM9497629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497630,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2045,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.521182516506064,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497630,,,train,sda-all,samples/GSE318562/GSM9497630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9497631,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4634,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.462097290340158,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497631,,,train,sda-all,samples/GSE318562/GSM9497631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9497632,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3147,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [Spatial Transcriptomics],GSE318562,GSE318562,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor section (IDH wildtype Glioblastoma),MONDO:0850335;MONDO:0021211,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.373992464388876,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9497632,,,train,sda-all,samples/GSE318562/GSM9497632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9498003,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,20349,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,GSE318590,GSE318590,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,,luna,,WT,age rule: age with unit,adult,6-8 months,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,CosMx,,,cell,960,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498003,,,train,sda-all,samples/GSE318590/GSM9498003,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9498004,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,16301,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,GSE318590,GSE318590,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,,luna,,WT,age rule: age with unit,adult,6-8 months,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,CosMx,,,cell,960,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498004,,,train,sda-all,samples/GSE318590/GSM9498004,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9498005,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,21032,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,GSE318590,GSE318590,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,,luna,,WT,age rule: age with unit,adult,3-4 months,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,CosMx,,,cell,960,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498005,,,train,sda-all,samples/GSE318590/GSM9498005,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9498006,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,22924,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,GSE318590,GSE318590,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,,luna,,WT,age rule: age with unit,adult,3-4 months,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,CosMx,,,cell,960,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498006,,,train,sda-all,samples/GSE318590/GSM9498006,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9498007,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,28014,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,GSE318590,GSE318590,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,MONDO:0004975,luna,,App NL-G-F,age rule: age with unit,adult,3-4 months,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,CosMx,,,cell,960,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498007,,,train,sda-all,samples/GSE318590/GSM9498007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9498008,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,20496,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,GSE318590,GSE318590,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,MONDO:0004975,luna,,App NL-G-F,age rule: age with unit,adult,3-4 months,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,CosMx,,,cell,960,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498008,,,train,sda-all,samples/GSE318590/GSM9498008,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9498009,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,22422,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,GSE318590,GSE318590,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,MONDO:0004975,luna,,App NL-G-F,age rule: age with unit,adult,6-8 months,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,CosMx,,,cell,960,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498009,,,train,sda-all,samples/GSE318590/GSM9498009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9498010,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,unknown,CosMx,CosMx,True,fluorescence: CosMx multichannel composite,28386,Spatial transcriptomics data of the wild-type and App NL-G-F mouse posterior cortex,GSE318590,GSE318590,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,,MONDO:0004975,luna,,App NL-G-F,age rule: age with unit,adult,6-8 months,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,CosMx,,,cell,960,counts,pixel,,unresolved,,VERIFIED,VERIFIED,ABSENT,,,VERIFIED,PASS,,,41794826,,GSM9498010,,,train,sda-all,samples/GSE318590/GSM9498010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9501433,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1788,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],GSE318726,GSE318726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver cancer,MONDO:0007027;MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.008374127802106,platform_constant,4.008374127802106,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501433,,,train,hesrt,samples/GSE318726/GSM9501433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9501434,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3442,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],GSE318726,GSE318726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver cancer,MONDO:0007027;MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.119999942320003,platform_constant,4.119999942320003,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501434,,,train,hesrt,samples/GSE318726/GSM9501434,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9501435,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2250,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],GSE318726,GSE318726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver cancer,MONDO:0007027;MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.114355683490721,platform_constant,4.114355683490721,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501435,,,train,hesrt,samples/GSE318726/GSM9501435,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9501436,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2195,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],GSE318726,GSE318726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver cancer,MONDO:0007027;MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.112000025000957,platform_constant,4.112000025000957,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501436,,,train,hesrt,samples/GSE318726/GSM9501436,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9501437,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2698,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],GSE318726,GSE318726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver cancer,MONDO:0007027;MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.07650514846102,platform_constant,4.07650514846102,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501437,,,train,hesrt,samples/GSE318726/GSM9501437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9501438,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3453,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],GSE318726,GSE318726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver cancer,MONDO:0007027;MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.075999870790793,platform_constant,4.075999870790793,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501438,,,train,hesrt,samples/GSE318726/GSM9501438,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9501439,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,609,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],GSE318726,GSE318726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver cancer,MONDO:0007027;MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.053846168440004,platform_constant,4.053846168440004,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501439,,,train,hesrt,samples/GSE318726/GSM9501439,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9501440,liver,disease,metabolic dysfunction-associated steatohepatitis;hepatocellular carcinoma,liver,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3364,Phenylalanine Reprograms TLS Maturation and Plasma cell differentiation in MASH-HCC [Spatial Transcriptomics],GSE318726,GSE318726,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver cancer,MONDO:0007027;MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,19465,counts,pixel,4.15600003283239,platform_constant,4.15600003283239,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,,,GSM9501440,,,train,hesrt,samples/GSE318726/GSM9501440,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9503424,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,299604,CosMX spatial transcriptomics of mouse subcutaneous EO771 tumors to study synergistic effects of NEDD8 depletion and anti-PD-1 therapy,GSE318797,GSE318797,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,Tumor,MONDO:0005070,luna,,anti-PD1/IgG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMX,,,cell,1194,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42330494,,GSM9503424,,,train,sda-all,samples/GSE318797/GSM9503424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9503425,other,disease,neoplasm,,xenograft,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,219990,CosMX spatial transcriptomics of mouse subcutaneous EO771 tumors to study synergistic effects of NEDD8 depletion and anti-PD-1 therapy,GSE318797,GSE318797,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,,Tumor,MONDO:0005070,luna,,anti-PD1/IgG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMX,,,cell,1194,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42330494,,GSM9503425,,,train,sda-all,samples/GSE318797/GSM9503425,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9505080,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2444,Vascular STING activation facilitates NK cell anti-tumor immunity in small cell lung cancer [Spatial_Transcriptome],GSE318867,GSE318867,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,SCLC,MONDO:0008433,luna,small cell lung cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.200112949097269,platform_constant,4.200112949097269,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41791380,,GSM9505080,,,train,hesrt,samples/GSE318867/GSM9505080,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9505081,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2589,Vascular STING activation facilitates NK cell anti-tumor immunity in small cell lung cancer [Spatial_Transcriptome],GSE318867,GSE318663+GSE318867,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,SCLC,MONDO:0008433,luna,small cell lung cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.184007132403596,platform_constant,4.184007132403596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41791380,,GSM9505081,,,train,hesrt,samples/GSE318867/GSM9505081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9505082,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2444,Vascular STING activation facilitates NK cell anti-tumor immunity in small cell lung cancer [Spatial_Transcriptome],GSE318867,GSE318867,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,SCLC,MONDO:0008433,luna,small cell lung cancer,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.184007132403596,platform_constant,4.184007132403596,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41791380,,GSM9505082,,,train,hesrt,samples/GSE318867/GSM9505082,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9511110,lung,perturbation,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,352913,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT,GSE319123,GSE319123,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0002048,Mouse lung,,luna,,NSG,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999951321618069,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,,,GSM9511110,,,train,sda-all,samples/GSE319123/GSM9511110,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9514099,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2203,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001296,Placenta,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FVQ,FVQ,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514099,,,test,sda-all,samples/GSE319236/GSM9514099,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.93, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9514100,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2728,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Chorioamniotic membranes,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FVQ,FVQ,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514100,,,test,sda-all,samples/GSE319236/GSM9514100,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 0.44, ""life_stage"": 0.9400000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514101,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3355,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FVQ,FVQ,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514101,,,test,sda-all,samples/GSE319236/GSM9514101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.65}",disease_status,low_confidence_annotation
GSM9514102,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2133,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Chorioamniotic membranes,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FCM,FCM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514102,,,test,sda-all,samples/GSE319236/GSM9514102,sda-tissue-disease-2.3,"{""organ"": 0.74, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.1, ""life_stage"": 0.9400000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514103,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1562,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FCM,FCM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514103,,,test,sda-all,samples/GSE319236/GSM9514103,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9514104,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3131,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FCM,FCM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514104,,,test,sda-all,samples/GSE319236/GSM9514104,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.13, ""uberon"": 0.98, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM9514105,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2876,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FCM,FCM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514105,,,test,sda-all,samples/GSE319236/GSM9514105,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.96, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9514106,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3293,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Chorioamniotic membranes,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FRH,FRH,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514106,,,test,sda-all,samples/GSE319236/GSM9514106,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 0.18, ""life_stage"": 0.9500000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514107,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2859,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FRH,FRH,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514107,,,test,sda-all,samples/GSE319236/GSM9514107,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514108,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2315,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FRH,FRH,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514108,,,test,sda-all,samples/GSE319236/GSM9514108,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9514109,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3322,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FRH,FRH,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514109,,,test,sda-all,samples/GSE319236/GSM9514109,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.98, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM9514110,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1775,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FRK,FRK,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514110,,,test,sda-all,samples/GSE319236/GSM9514110,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 0.54, ""life_stage"": 0.98}",disease_status;uberon,low_confidence_annotation
GSM9514111,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2332,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FRK,FRK,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514111,,,test,sda-all,samples/GSE319236/GSM9514111,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9514112,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2592,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FRK,FRK,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514112,,,test,sda-all,samples/GSE319236/GSM9514112,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 0.49}",disease_status;life_stage,low_confidence_annotation
GSM9514113,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3985,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FRK,FRK,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514113,,,test,sda-all,samples/GSE319236/GSM9514113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9514114,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3116,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FVQ,FVQ,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514114,,,test,sda-all,samples/GSE319236/GSM9514114,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9514115,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2643,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Chorioamniotic membranes,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FVS,FVS,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514115,,,test,sda-all,samples/GSE319236/GSM9514115,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 0.62, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9514116,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1346,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FVS,FVS,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514116,,,test,sda-all,samples/GSE319236/GSM9514116,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9514117,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3003,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FVS,FVS,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514117,,,test,sda-all,samples/GSE319236/GSM9514117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.45, ""uberon"": 0.98, ""life_stage"": 0.6900000000000001}",disease_status,low_confidence_annotation
GSM9514118,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2520,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FVS,FVS,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514118,,,test,sda-all,samples/GSE319236/GSM9514118,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 0.71}",disease_status,low_confidence_annotation
GSM9514119,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2074,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:LJ,LJ,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514119,,,test,sda-all,samples/GSE319236/GSM9514119,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.36, ""life_stage"": 0.9500000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514120,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2027,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:LJ,LJ,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514120,,,test,sda-all,samples/GSE319236/GSM9514120,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 0.27, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514121,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3094,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FLJ,FLJ,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514121,,,test,sda-all,samples/GSE319236/GSM9514121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 0.72}",disease_status,low_confidence_annotation
GSM9514122,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3302,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FLJ,FLJ,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514122,,,test,sda-all,samples/GSE319236/GSM9514122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 0.71}",disease_status,low_confidence_annotation
GSM9514123,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1866,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FND,FND,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514123,,,test,sda-all,samples/GSE319236/GSM9514123,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 0.12, ""life_stage"": 0.9400000000000001}",uberon,low_confidence_annotation
GSM9514124,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1269,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FND,FND,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514124,,,test,sda-all,samples/GSE319236/GSM9514124,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9514125,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3044,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:ND,ND,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514125,,,test,sda-all,samples/GSE319236/GSM9514125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 0.98, ""life_stage"": 0.8}",disease_status,low_confidence_annotation
GSM9514126,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3542,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FLR,FLR,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514126,,,test,sda-all,samples/GSE319236/GSM9514126,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.32, ""life_stage"": 0.91}",disease_status;uberon,low_confidence_annotation
GSM9514127,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2080,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FLR,FLR,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514127,,,test,sda-all,samples/GSE319236/GSM9514127,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514128,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1979,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FLR,FLR,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514128,,,test,sda-all,samples/GSE319236/GSM9514128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9514129,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1988,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FLR,FLR,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514129,,,test,sda-all,samples/GSE319236/GSM9514129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9514130,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2190,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FVB,FVB,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514130,,,test,sda-all,samples/GSE319236/GSM9514130,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 0.4, ""life_stage"": 0.9400000000000001}",organ;disease_status;uberon,low_confidence_annotation
GSM9514131,uterus,disease,preeclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2529,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0005081,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FVB,FVB,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514131,,,test,sda-all,samples/GSE319236/GSM9514131,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9514132,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2903,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FVB,FVB,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514132,,,test,sda-all,samples/GSE319236/GSM9514132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.73}",disease_status,low_confidence_annotation
GSM9514133,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3204,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FGS,FGS,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514133,,,test,sda-all,samples/GSE319236/GSM9514133,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.99, ""disease_status"": 0.2, ""uberon"": 0.58, ""life_stage"": 0.9400000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514134,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1690,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FGS,FGS,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514134,,,test,sda-all,samples/GSE319236/GSM9514134,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9514135,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2555,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FGS,FGS,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514135,,,test,sda-all,samples/GSE319236/GSM9514135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM9514136,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2249,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FFM,FFM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514136,,,test,sda-all,samples/GSE319236/GSM9514136,sda-tissue-disease-2.3,"{""organ"": 0.66, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 0.2, ""life_stage"": 0.97}",disease_status;uberon,low_confidence_annotation
GSM9514137,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2614,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FFM,FFM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514137,,,test,sda-all,samples/GSE319236/GSM9514137,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 0.97}",disease_status,low_confidence_annotation
GSM9514138,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2688,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FFM,FFM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514138,,,test,sda-all,samples/GSE319236/GSM9514138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 0.8200000000000001}",disease_status,low_confidence_annotation
GSM9514139,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3136,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FVT,FVT,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514139,,,test,sda-all,samples/GSE319236/GSM9514139,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.99, ""disease_status"": 0.75, ""uberon"": 0.04, ""life_stage"": 0.9500000000000001}",uberon,low_confidence_annotation
GSM9514140,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2234,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FVT,FVT,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514140,,,test,sda-all,samples/GSE319236/GSM9514140,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514141,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3187,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FVT,FVT,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514141,,,test,sda-all,samples/GSE319236/GSM9514141,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9514142,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2729,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Chorioamniotic membranes,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FEP,FEP,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514142,,,test,sda-all,samples/GSE319236/GSM9514142,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 0.42, ""life_stage"": 0.93}",disease_status;uberon,low_confidence_annotation
GSM9514143,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1893,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FEP,FEP,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514143,,,test,sda-all,samples/GSE319236/GSM9514143,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514144,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2511,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FEP,FEP,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514144,,,test,sda-all,samples/GSE319236/GSM9514144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.59}",life_stage,low_confidence_annotation
GSM9514145,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2820,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FAM,FAM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514145,,,test,sda-all,samples/GSE319236/GSM9514145,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.04, ""life_stage"": 0.91}",disease_status;uberon,low_confidence_annotation
GSM9514146,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2476,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FAM,FAM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514146,,,test,sda-all,samples/GSE319236/GSM9514146,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.98, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9514147,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3214,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FAM,FAM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514147,,,test,sda-all,samples/GSE319236/GSM9514147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM9514148,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2550,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FJD,FJD,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514148,,,test,sda-all,samples/GSE319236/GSM9514148,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 0.58, ""life_stage"": 0.99}",disease_status;uberon,low_confidence_annotation
GSM9514149,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1656,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FJD,FJD,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514149,,,test,sda-all,samples/GSE319236/GSM9514149,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.87}",disease_status,low_confidence_annotation
GSM9514150,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3664,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FJD,FJD,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514150,,,test,sda-all,samples/GSE319236/GSM9514150,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.13, ""uberon"": 0.98, ""life_stage"": 0.85}",disease_status,low_confidence_annotation
GSM9514151,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2029,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FYI,FYI,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514151,,,test,sda-all,samples/GSE319236/GSM9514151,sda-tissue-disease-2.3,"{""organ"": 0.81, ""sample_kind"": 0.99, ""disease_status"": 0.37, ""uberon"": 0.36, ""life_stage"": 0.89}",disease_status;uberon,low_confidence_annotation
GSM9514152,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2774,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FYI,FYI,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514152,,,test,sda-all,samples/GSE319236/GSM9514152,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9514153,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3392,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FYI,FYI,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514153,,,test,sda-all,samples/GSE319236/GSM9514153,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.98, ""life_stage"": 0.6000000000000001}",disease_status,low_confidence_annotation
GSM9514154,placenta,disease,severe pre-eclampsia,,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2217,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Chorioamniotic membranes,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FNS,FNS,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514154,,,test,sda-all,samples/GSE319236/GSM9514154,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.4, ""life_stage"": 0.9400000000000001}",disease_status;uberon,low_confidence_annotation
GSM9514155,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1278,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Control,,luna,not stated,,not stated,,GSE319236:FNS,FNS,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514155,,,test,sda-all,samples/GSE319236/GSM9514155,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 1.0, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9514156,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3015,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Control,,luna,not stated,,not stated,,GSE319236:FNS,FNS,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514156,,,test,sda-all,samples/GSE319236/GSM9514156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 0.74}",disease_status,low_confidence_annotation
GSM9514157,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2496,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Chorioamniotic membranes,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FSH,FSH,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514157,,,test,sda-all,samples/GSE319236/GSM9514157,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.22, ""life_stage"": 0.8}",disease_status;uberon,low_confidence_annotation
GSM9514158,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1931,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FSH,FSH,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514158,,,test,sda-all,samples/GSE319236/GSM9514158,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9514159,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2659,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FSH,FSH,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514159,,,test,sda-all,samples/GSE319236/GSM9514159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.19, ""uberon"": 0.99, ""life_stage"": 0.89}",disease_status,low_confidence_annotation
GSM9514160,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,2097,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Chorioamniotic membranes,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FMM,FMM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514160,,,test,sda-all,samples/GSE319236/GSM9514160,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 0.62, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM9514161,uterus,disease,severe pre-eclampsia,myometrium,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1573,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001296,Myometrium,MONDO:0001641,mondo_predicate,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FMM,FMM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514161,,,test,sda-all,samples/GSE319236/GSM9514161,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9514162,placenta,disease,severe pre-eclampsia,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3461,Spatially resolved maternal and fetal cell contributions to severe Preeclampsia,GSE319236,GSE319236,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,MONDO:0001641,luna,Preeclamptic,,luna,not stated,,not stated,,GSE319236:FMM,FMM,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9514162,,,test,sda-all,samples/GSE319236/GSM9514162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 0.8}",disease_status,low_confidence_annotation
GSM9514750,lung,perturbation,,lung,cell culture,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],GSE319277,GSE319277,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Mouse lung,,luna,,NSG,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,44470,unknown,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514750,,,train,sda-all,samples/GSE319277/GSM9514750,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.44, ""disease_status"": 0.27, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9514751,lung,perturbation,,lung,cell culture,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2485,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],GSE319277,GSE319277,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Mouse lung,,luna,,NSG,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,45656,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9514751,,,train,sda-all,samples/GSE319277/GSM9514751,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.18, ""disease_status"": 0.2, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,low_confidence_annotation
GSM9514752,lung,perturbation,,lung,cell culture,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],GSE319277,GSE319277,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0002048,Mouse lung,,luna,,NSG,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,89694,unknown,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514752,,,train,sda-all,samples/GSE319277/GSM9514752,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.39, ""disease_status"": 0.36, ""uberon"": 0.98, ""life_stage"": 1.0}",sample_kind;disease_status,feature_species_differs;low_confidence_annotation
GSM9514753,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],GSE319277,GSE319277,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Mouse liver,,luna,,Ros-K46a26-LSL-Cas9-2A-EGFP,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,22666,unknown,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514753,,,train,sda-all,samples/GSE319277/GSM9514753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9514754,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2431,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],GSE319277,GSE319277,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Mouse liver,,luna,,Rosa26-LSL-Cas9-2A-EGFP,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,39741,unknown,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514754,,,train,sda-all,samples/GSE319277/GSM9514754,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9514757,lung,disease,,lung,cell culture,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2500,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],GSE319277,GSE319277,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Mouse lung,,luna,,C57BL-6J,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,19975,unknown,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514757,,,train,sda-all,samples/GSE319277/GSM9514757,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.64, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9514758,lung,perturbation,,lung,cell culture,Mus musculus,house mouse,not stated,unknown,DBiT-seq,DBiT-seq,False,,2490,Spatially Resolved Panoramic in vivo CRISPR Screen via Perturb-DBiT [Spatial Transcriptomics],GSE319277,GSE319277,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0002048,Mouse lung,,luna,,NSG,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,46872,unknown,unstated,,unresolved,,WITHHELD,,,units_unstated;hesrt_review_fail,,VERIFIED,,,,,,GSM9514758,,,train,sda-all,samples/GSE319277/GSM9514758,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.53, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",sample_kind;disease_status,feature_species_differs;low_confidence_annotation
GSM9519394,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,8487,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.973807809244113,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519394,,,train,sda-all,samples/GSE319536/GSM9519394,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9519395,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2087,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.9804452126787697,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519395,,,train,sda-all,samples/GSE319536/GSM9519395,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519396,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2865,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.407033869765732,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519396,,,train,sda-all,samples/GSE319536/GSM9519396,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9519397,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4359,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.802186897914921,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519397,,,train,sda-all,samples/GSE319536/GSM9519397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519398,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1848,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.008906755823962,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519398,,,train,sda-all,samples/GSE319536/GSM9519398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9519399,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3843,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.634982579751843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519399,,,train,sda-all,samples/GSE319536/GSM9519399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9519400,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,8953,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.934196951831057,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519400,,,train,sda-all,samples/GSE319536/GSM9519400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9519401,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3512,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.397420105579273,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519401,,,train,sda-all,samples/GSE319536/GSM9519401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519402,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,277,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.433050145009339,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519402,,,train,sda-all,samples/GSE319536/GSM9519402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519403,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2579,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.9807176123782537,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519403,,,train,sda-all,samples/GSE319536/GSM9519403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519404,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,10487,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.80140338611184,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519404,,,train,sda-all,samples/GSE319536/GSM9519404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519405,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2001,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.020370672617724,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519405,,,train,sda-all,samples/GSE319536/GSM9519405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519406,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,14336,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.68294140408361,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519406,,,train,sda-all,samples/GSE319536/GSM9519406,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519407,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,7660,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.825483079933342,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519407,,,train,sda-all,samples/GSE319536/GSM9519407,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519408,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3155,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.461178973857805,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519408,,,train,sda-all,samples/GSE319536/GSM9519408,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9519409,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,5362,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.816316521053373,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519409,,,train,sda-all,samples/GSE319536/GSM9519409,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9519410,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4612,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.106306448981485,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519410,,,train,sda-all,samples/GSE319536/GSM9519410,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519411,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2981,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.130110135700227,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519411,,,train,sda-all,samples/GSE319536/GSM9519411,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9519412,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2633,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.194180997904183,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519412,,,train,sda-all,samples/GSE319536/GSM9519412,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9519413,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3485,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.411968238253659,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519413,,,train,sda-all,samples/GSE319536/GSM9519413,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519414,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3102,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.139953822741327,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519414,,,train,sda-all,samples/GSE319536/GSM9519414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9519415,bladder,disease,urinary bladder carcinoma,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4387,A Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities and Immune Architecture,GSE319536,GSE319536,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,MONDO:0004986,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.29512256148646,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9519415,,,train,sda-all,samples/GSE319536/GSM9519415,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9521682,liver,normal,,liver,primary tissue,Homo sapiens,human,fetal,unknown,Visium HD,Visium HD,True,H&E,500570,Inference of cell-cell communication in human fetal liver from high definition spatial profiling using Renoir,GSE319617,GSE319617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Fetal Liver,,luna,,,luna,fetal,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18132,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42086556,,GSM9521682,,,train,hesrt,samples/GSE319617/GSM9521682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9521683,liver,normal,,liver,primary tissue,Homo sapiens,human,fetal,unknown,Visium HD,Visium HD,True,H&E,333667,Inference of cell-cell communication in human fetal liver from high definition spatial profiling using Renoir,GSE319617,GSE319617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Fetal Liver,,luna,,,luna,fetal,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium HD,,,bin,18132,counts,pixel,,unresolved,,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42086556,,GSM9521683,,,train,hesrt,samples/GSE319617/GSM9521683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9524129,skin,disease,melanoma,skin of body,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,138401,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],GSE319706,GSE319706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,YUMMER1.7 mouse melanoma tissue (C57BL/6J),MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000089694761826,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524129,,,train,sda-all,samples/GSE319706/GSM9524129,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 0.93, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9524130,skin,disease,melanoma,skin of body,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,89487,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],GSE319706,GSE319706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,YUMMER1.7 mouse melanoma tissue (C57BL/6J),MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998595007098906,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524130,,,train,sda-all,samples/GSE319706/GSM9524130,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9524131,skin,disease,melanoma,skin of body,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,134421,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],GSE319706,GSE319706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,YUMMER1.7 mouse melanoma tissue (C57BL/6J),MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000014785025726,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524131,,,train,sda-all,samples/GSE319706/GSM9524131,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9524132,skin,disease,melanoma,skin of body,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,93717,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],GSE319706,GSE319706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,YUMMER1.7 mouse melanoma tissue (C57BL/6J),MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000051741470048,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524132,,,train,sda-all,samples/GSE319706/GSM9524132,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9524133,skin,disease,melanoma,skin of body,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,119929,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],GSE319706,GSE319706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,YUMMER1.7 mouse melanoma tissue (C57BL/6J),MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000044386577499,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524133,,,train,sda-all,samples/GSE319706/GSM9524133,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.62, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9524134,skin,disease,melanoma,skin of body,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,101770,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],GSE319706,GSE319706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,YUMMER1.7 mouse melanoma tissue (C57BL/6J),MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999187063970674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524134,,,train,sda-all,samples/GSE319706/GSM9524134,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9524135,other,disease,melanoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,110534,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],GSE319706,GSE319706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,YUMMER1.7 mouse melanoma tissue (C57BL/6J),MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999944310081466,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524135,,,train,sda-all,samples/GSE319706/GSM9524135,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9524136,skin,disease,melanoma,skin of body,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,134966,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],GSE319706,GSE319706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002097,YUMMER1.7 mouse melanoma tissue (C57BL/6J),MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999972401611746,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524136,,,train,sda-all,samples/GSE319706/GSM9524136,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9524137,other,disease,melanoma,,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,112553,Spatial polarization of endothelial ICAM-1 drives CD8⁺ T cell exclusion in melanoma [Xenium],GSE319706,GSE319706,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,YUMMER1.7 mouse melanoma tissue (C57BL/6J),MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999704316972204,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9524137,,,train,sda-all,samples/GSE319706/GSM9524137,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9525785,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,142747,Cytotoxic CD39+ tumor-associated NK cells respond to NKG2A blockade in lung cancer (10x Xenium),GSE319755,GSE319755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung adenocarcinoma,MONDO:0005061,luna,NSCLC,,age rule: bare number read as years,aged,69,extracted field,male,,,,,release v3,imaging-based,Xenium,,,cell,568,counts,um,1.0,verified,0.5000192702980473,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42247486,,GSM9525785,,,train,sda-all,samples/GSE319755/GSM9525785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 0.98}",,
GSM9525786,lung,disease,non-small cell lung carcinoma,lung,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,14187,Cytotoxic CD39+ tumor-associated NK cells respond to NKG2A blockade in lung cancer (10x Xenium),GSE319755,GSE319755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,adjacent lung tissue,MONDO:0005233,luna,NSCLC,,age rule: bare number read as years,aged,69,extracted field,male,,,,,release v3,imaging-based,Xenium,,,cell,568,counts,um,1.0,verified,0.5000043988269794,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42247486,,GSM9525786,,,train,sda-all,samples/GSE319755/GSM9525786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9525787,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,137993,Cytotoxic CD39+ tumor-associated NK cells respond to NKG2A blockade in lung cancer (10x Xenium),GSE319755,GSE319755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,margin at lung adenocacinoma,MONDO:0005061,luna,NSCLC,,age rule: bare number read as years,aged,69,extracted field,male,,,,,release v3,imaging-based,Xenium,,,cell,568,counts,um,1.0,verified,0.49997818499127394,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42247486,,GSM9525787,,,train,sda-all,samples/GSE319755/GSM9525787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9525962,lung,normal,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,244374,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE319763,GSE319763,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Human 5K Pan Tissue & Pathways Panel,xenium-4.0.1.0,cell,10029,counts,um,1.0,verified,0.4999961795397983,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9525962,,,train,sda-all,samples/GSE319763/GSM9525962,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9525963,lung,disease,acute myeloid leukemia;lung disorder,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,736414,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE319763,GSE319763,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0018874;MONDO:0005275,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Human 5K Pan Tissue & Pathways Panel,xenium-4.0.1.0,cell,10029,counts,um,1.0,verified,0.5000092798812176,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9525963,,,train,sda-all,samples/GSE319763/GSM9525963,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9525964,lung,disease,acute myeloid leukemia;lung disorder,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,43810,Inflammatory immune modulators of AML lung infiltration and respiratory failure,GSE319763,GSE319763,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0018874;MONDO:0005275,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,Xenium Human 5K Pan Tissue & Pathways Panel,xenium-4.0.1.0,cell,10029,counts,um,1.0,verified,0.5000132774696093,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9525964,,,train,sda-all,samples/GSE319763/GSM9525964,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9526110,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16793,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000206334468172,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526110,,,train,sda-all,samples/GSE319771/GSM9526110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526111,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,43038,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.49999756465832157,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526111,,,train,sda-all,samples/GSE319771/GSM9526111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.64, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9526112,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,30913,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999941141848146,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526112,,,train,sda-all,samples/GSE319771/GSM9526112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526113,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,62383,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000137677833868,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526113,,,train,sda-all,samples/GSE319771/GSM9526113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526114,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,31891,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000011474205984,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526114,,,train,sda-all,samples/GSE319771/GSM9526114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526115,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,117332,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000115027146407,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526115,,,train,sda-all,samples/GSE319771/GSM9526115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526116,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,65595,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000103173147469,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42206386,,GSM9526116,,,train,sda-all,samples/GSE319771/GSM9526116,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526117,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19419,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999806720956602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526117,,,train,sda-all,samples/GSE319771/GSM9526117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526118,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,10976,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999811437191443,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526118,,,train,sda-all,samples/GSE319771/GSM9526118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526119,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,28499,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999908290535583,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526119,,,train,sda-all,samples/GSE319771/GSM9526119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526120,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,25920,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999896855230586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526120,,,train,sda-all,samples/GSE319771/GSM9526120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526121,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,95497,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999828107810781,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526121,,,train,sda-all,samples/GSE319771/GSM9526121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526122,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,35573,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000206076307112,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42206386,,GSM9526122,,,train,sda-all,samples/GSE319771/GSM9526122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526123,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,26610,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999862372694742,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526123,,,train,sda-all,samples/GSE319771/GSM9526123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526124,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,162196,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999961880282303,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526124,,,train,sda-all,samples/GSE319771/GSM9526124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526125,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,155293,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,mondo_predicate,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000054763179672,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526125,,,train,sda-all,samples/GSE319771/GSM9526125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526126,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,42949,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000217730106344,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42206386,,GSM9526126,,,train,sda-all,samples/GSE319771/GSM9526126,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.32, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9526127,heart,disease,cardiac sarcoidosis,heart,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,104611,Integrative Molecular Analyses of Inflammatory and Autoimmune Signals in Cardiac Sarcoidosis [Xenium],GSE319771,GSE319771,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000948,Heart,MONDO:0001707,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.49999597959933834,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42206386,,GSM9526127,,,train,sda-all,samples/GSE319771/GSM9526127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9527706,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1256,Spatial transcriptomic profiling of TOP2B-driven anthracycline-induced cardiotoxicity in mouse hearts,GSE319842,GSE319842,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Cardiac Tissue,,luna,,alpha_MHC_MerCreMer_het,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.9724334084341795,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42102394,,GSM9527706,,,train,sda-all,samples/GSE319842/GSM9527706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9527707,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,924,Spatial transcriptomic profiling of TOP2B-driven anthracycline-induced cardiotoxicity in mouse hearts,GSE319842,GSE319842,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Cardiac Tissue,,luna,,alpha_MHC_MerCreMer_Het_TOP2B_LSL,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.025396881618484,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42102394,,GSM9527707,,,train,sda-all,samples/GSE319842/GSM9527707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9530208,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,male,MERFISH/MERSCOPE,MERSCOPE,False,,315533,Logistic regression for estimating functional effects with spatial transcriptomics,GSE319949,GSE319949,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,luna,neonatal or infant,12 days,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,819,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,42137981,,GSM9530208,,,train,sda-all,samples/GSE319949/GSM9530208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9530209,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,male,MERFISH/MERSCOPE,MERSCOPE,False,,292193,Logistic regression for estimating functional effects with spatial transcriptomics,GSE319949,GSE319949,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,luna,neonatal or infant,18 days,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,819,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,42137981,,GSM9530209,,,train,sda-all,samples/GSE319949/GSM9530209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9530210,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,male,MERFISH/MERSCOPE,MERSCOPE,False,,276810,Logistic regression for estimating functional effects with spatial transcriptomics,GSE319949,GSE319949,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,luna,neonatal or infant,12 days,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,819,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,42137981,,GSM9530210,,,train,sda-all,samples/GSE319949/GSM9530210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9530211,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,male,MERFISH/MERSCOPE,MERSCOPE,False,,312003,Logistic regression for estimating functional effects with spatial transcriptomics,GSE319949,GSE319949,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,luna,neonatal or infant,18 days,extracted field,Male,,,fresh frozen,Fresh frozen,release v3,imaging-based,MERSCOPE,,,cell,819,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,42137981,,GSM9530211,,,train,sda-all,samples/GSE319949/GSM9530211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9532655,skin,disease,metastatic melanoma,skin of body,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4991,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.017561143367967,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532655,,,train,sda-all,samples/GSE320041/GSM9532655,sda-tissue-disease-2.3,"{""organ"": 0.42, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.12, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9532656,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4708,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.0330114393632615,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532656,,,train,sda-all,samples/GSE320041/GSM9532656,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9532657,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4920,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.965806711591505,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532657,,,train,sda-all,samples/GSE320041/GSM9532657,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9532658,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4919,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.211432322772551,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532658,,,train,sda-all,samples/GSE320041/GSM9532658,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9532659,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,52861,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,4.621923651277648,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532659,,,train,sda-all,samples/GSE320041/GSM9532659,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532660,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: magenta (heuristic),4990,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.993223563957389,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532660,,,train,sda-all,samples/GSE320041/GSM9532660,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532661,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,175561,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,4.634204283641579,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532661,,,train,sda-all,samples/GSE320041/GSM9532661,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9532662,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4910,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.037904465117135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532662,,,train,sda-all,samples/GSE320041/GSM9532662,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9532663,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,"fluorescence: single channel, grayscale (heuristic)",3819,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.003127609375573,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532663,,,train,sda-all,samples/GSE320041/GSM9532663,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9532664,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4886,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.9389093856734485,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532664,,,train,sda-all,samples/GSE320041/GSM9532664,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532665,skin,disease,metastatic melanoma,skin of body,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3932,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002097,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,7.022638860759608,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532665,,,train,sda-all,samples/GSE320041/GSM9532665,sda-tissue-disease-2.3,"{""organ"": 0.62, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9532666,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4932,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.804313805901123,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532666,,,train,sda-all,samples/GSE320041/GSM9532666,sda-tissue-disease-2.3,"{""organ"": 0.72, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9532667,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,746,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,2.2480873882879986,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42092150,,GSM9532667,,,train,sda-all,samples/GSE320041/GSM9532667,sda-tissue-disease-2.3,"{""organ"": 0.47000000000000003, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532668,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2558,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.871596612834962,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42092150,,GSM9532668,,,train,sda-all,samples/GSE320041/GSM9532668,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532669,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,476,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,2.232613110398397,VERIFIED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42092150,,GSM9532669,,,train,sda-all,samples/GSE320041/GSM9532669,sda-tissue-disease-2.3,"{""organ"": 0.48, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9532670,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2597,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.728733785426858,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42092150,,GSM9532670,,,train,sda-all,samples/GSE320041/GSM9532670,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9532671,unknown,disease,metastatic melanoma,,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2785,High-resolution and noninvasive profiling of the tumor microenvironment with spatial ecotypes [Visium],GSE320041,GSE320041+GSE320042,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Metastatic melanoma,MONDO:0005191,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.387958605401426,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42092150,,GSM9532671,,,train,sda-all,samples/GSE320041/GSM9532671,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9535604,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,273523,NKG2A inhibition promotes NK cell-CD8+ T cell interactions in support of improved anticancer immunity in ovarian carcinoma,GSE320142,GSE320142,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Primary lung cancer,MONDO:0005233,luna,,untreated,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499986740526843,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41998001,,GSM9535604,,,train,sda-all,samples/GSE320142/GSM9535604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9535605,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,545933,NKG2A inhibition promotes NK cell-CD8+ T cell interactions in support of improved anticancer immunity in ovarian carcinoma,GSE320142,GSE320142,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Primary lung cancer,MONDO:0005233,luna,,untreated,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000007924935016,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41998001,,GSM9535605,,,train,sda-all,samples/GSE320142/GSM9535605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9535606,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,355346,NKG2A inhibition promotes NK cell-CD8+ T cell interactions in support of improved anticancer immunity in ovarian carcinoma,GSE320142,GSE320142,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Primary ovarian cancer,MONDO:0005140,luna,,untreated,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999925295084416,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41998001,,GSM9535606,,,train,sda-all,samples/GSE320142/GSM9535606,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9535607,ovary,disease,ovarian carcinoma,ovary,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,110570,NKG2A inhibition promotes NK cell-CD8+ T cell interactions in support of improved anticancer immunity in ovarian carcinoma,GSE320142,GSE320142,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Primary ovarian cancer,MONDO:0005140,luna,,untreated,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997810858143604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41998001,,GSM9535607,,,train,sda-all,samples/GSE320142/GSM9535607,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9541930,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2006,Spatial transcriptomics analysis of dual-pathway spots,GSE320372,GSE320372,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,normal chow diet,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.681877400909816,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41890086,,GSM9541930,,,train,sda-all,samples/GSE320372/GSM9541930,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9541931,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1715,Spatial transcriptomics analysis of dual-pathway spots,GSE320372,GSE320372,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,3-month high-fat diet,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.6877214927291595,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41890086,,GSM9541931,,,train,sda-all,samples/GSE320372/GSM9541931,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9541932,liver,disease,fish eye disease,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2972,Spatial transcriptomics analysis of dual-pathway spots,GSE320372,GSE320372,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Homo sapiens,luna,UBERON:0002107,Liver,MONDO:0007620,mondo_predicate (Luna: perturbation),,Humanized liver,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,8.125851436620149,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41890086,,GSM9541932,,,train,sda-all,samples/GSE320372/GSM9541932,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,feature_species_differs;low_confidence_annotation
GSM9829399,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1446,Spatial transcriptomics analysis of dual-pathway spots,GSE320372,GSE320372,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Normal Chow Diet Fast,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.6825488819963335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41890086,,GSM9829399,,,train,sda-all,samples/GSE320372/GSM9829399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9829400,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2163,Spatial transcriptomics analysis of dual-pathway spots,GSE320372,GSE320372,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,3-Month High-Fat Diet Fast,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.68689629039716,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41890086,,GSM9829400,,,train,sda-all,samples/GSE320372/GSM9829400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9542521,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,155388,The role of retinoic acid receptor signaling in liver cells during Alcohol-associated liver disease resolution by spatial transcriptomics analysis,GSE320403,GSE320403,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0005154,luna,,"western diet, alcohol and DMSO or RAR agonist",luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.4999914957721838,VERIFIED,VERIFIED,VERIFIED,hesrt_review_fail;hesrt_fail_image_released,,VERIFIED,PASS,,,,,GSM9542521,,,train,sda-all,samples/GSE320403/GSM9542521,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9543396,small intestine,normal,,intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2098,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine,,luna,,Control (NIAAA model),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.959217654720498,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543396,,,test,sda-all,samples/GSE320442/GSM9543396,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.9, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9543397,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2214,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0005154,luna,,Control (NIAAA model),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.784553577166233,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543397,,,test,sda-all,samples/GSE320442/GSM9543397,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9543398,small intestine,disease,hepatobiliary disorder,intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2489,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine,MONDO:0002515,luna,,Ethanol feeding (NIAAA model),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.200698442152988,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543398,,,test,sda-all,samples/GSE320442/GSM9543398,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.7000000000000001, ""life_stage"": 0.99}",,
GSM9543399,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1989,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0005154,luna,,Ethanol feeding (NIAAA model),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.580339424686576,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543399,,,test,sda-all,samples/GSE320442/GSM9543399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9543400,small intestine,disease,liver disorder,intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2307,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine,MONDO:0005154,luna,,Ethanol feeding+FTY720 (NIAAA model),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.091991811473675,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543400,,,test,sda-all,samples/GSE320442/GSM9543400,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9543401,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1646,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0005154,luna,,Ethanol feeding+FTY720 (NIAAA model),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.091712726185764,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9543401,,,test,sda-all,samples/GSE320442/GSM9543401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9824766,small intestine,normal,,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),2905,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine,,luna,,Control (NIAAA model),age rule: age with unit,adult,8-10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.899885374849285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824766,,,test,sda-all,samples/GSE320442/GSM9824766,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9824767,liver,disease,hepatobiliary disorder,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1744,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0002515,mondo_predicate,,Control (NIAAA model),age rule: age with unit,adult,8-10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.00202487382655,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824767,,,test,sda-all,samples/GSE320442/GSM9824767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.98, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9824768,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1762,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,,luna,,Control (NIAAA model),age rule: age with unit,adult,8-10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.889073489001442,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824768,,,test,sda-all,samples/GSE320442/GSM9824768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9824769,small intestine,disease,liver disorder,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),2161,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine,MONDO:0005154,luna,,Ethanol feeding (NIAAA model),age rule: age with unit,adult,8-10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.88423289518897,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824769,,,test,sda-all,samples/GSE320442/GSM9824769,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.6900000000000001, ""life_stage"": 0.98}",,
GSM9824770,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),2048,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0005154,luna,,Ethanol feeding (NIAAA model),age rule: age with unit,adult,8-10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.8892073515045285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824770,,,test,sda-all,samples/GSE320442/GSM9824770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9824771,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1751,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0005154,luna,,Ethanol feeding (NIAAA model),age rule: age with unit,adult,8-10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.004228992447162,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824771,,,test,sda-all,samples/GSE320442/GSM9824771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9824772,small intestine,disease,hepatobiliary disorder,intestine,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),2708,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000160,Intestine,MONDO:0002515,mondo_predicate (Luna: perturbation),,Ethanol feeding+FTY720 (NIAAA model),age rule: age with unit,adult,8-10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.993302429455433,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824772,,,test,sda-all,samples/GSE320442/GSM9824772,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9824773,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1813,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0005154,luna,,Ethanol feeding+FTY720 (NIAAA model),age rule: age with unit,adult,8-10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.893023742614116,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824773,,,test,sda-all,samples/GSE320442/GSM9824773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9824774,liver,disease,liver disorder,liver,primary tissue,Mus musculus,house mouse,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1669,Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation and Injury in Alcohol-Associated Liver Disease [Spatial Transcriptomics],GSE320442,GSE320442,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Liver,MONDO:0005154,luna,,Ethanol feeding+FTY720 (NIAAA model),age rule: age with unit,adult,8-10 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.001608066260551,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9824774,,,test,sda-all,samples/GSE320442/GSM9824774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9544115,skin,disease,basal cell carcinoma,zone of skin,tumour tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,120819,Genetic and pharmacologic disruption of N-Myc suppresses basal cell carcinoma,GSE320484,GSE320484,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0020804,luna,,"GPP male mouse was induced with tamoxifen at 8 weeks of age, and skin biopsies were collected 5 weeks post-induction.",luna,adult,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13435,counts,um,1.0,verified,0.5000092729970327,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9544115,,,train,sda-all,samples/GSE320484/GSM9544115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.92, ""uberon"": 0.5700000000000001, ""life_stage"": 0.93}",uberon,low_confidence_annotation
GSM9544116,skin,disease,basal cell carcinoma,zone of skin,tumour tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,70706,Genetic and pharmacologic disruption of N-Myc suppresses basal cell carcinoma,GSE320484,GSE320484,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0020804,luna,,"GPP female mouse was induced with tamoxifen at 8 weeks of age, and skin biopsies were collected 5 weeks post-induction.",luna,adult,,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13435,counts,um,1.0,verified,0.5000016358401674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9544116,,,train,sda-all,samples/GSE320484/GSM9544116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.93, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9712817,skin,disease,basal cell carcinoma,zone of skin,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,109179,Genetic and pharmacologic disruption of N-Myc suppresses basal cell carcinoma,GSE320484,GSE320484,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0020804,luna,,"GPP male mouse was induced with tamoxifen at 8 weeks of age. Five weeks post-induction, mice were treated with IMQ for 5 consecutive days, followed by skin biopsy collection.",luna,adult,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13435,counts,um,1.0,verified,0.5000073110103816,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9712817,,,train,sda-all,samples/GSE320484/GSM9712817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 0.93, ""uberon"": 0.48, ""life_stage"": 0.97}",uberon,low_confidence_annotation
GSM9712818,skin,disease,carcinoma,zone of skin,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,103216,Genetic and pharmacologic disruption of N-Myc suppresses basal cell carcinoma,GSE320484,GSE320484,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,MONDO:0004993,luna,,"GPP female mouse was induced with tamoxifen at 8 weeks of age. Five weeks post-induction, mice were treated with IMQ for 5 consecutive days, followed by skin biopsy collection.",luna,adult,,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13435,counts,um,1.0,verified,0.4999956375692536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9712818,,,train,sda-all,samples/GSE320484/GSM9712818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.72, ""uberon"": 0.59, ""life_stage"": 0.98}",uberon,low_confidence_annotation
GSM9544605,brain,disease,cancer,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3623,Single cell and spatial sequencing analysis of cancer associated fibroblasts in the brain metastasis tumor microenvironment,GSE320505,GSE320505,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain metastasis,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.262754101824801,platform_constant,4.262754101824801,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41917370,10.1038/s42003-026-09915-1,GSM9544605,,,test,hesrt,samples/GSE320505/GSM9544605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9544606,brain,disease,cancer,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,809,Single cell and spatial sequencing analysis of cancer associated fibroblasts in the brain metastasis tumor microenvironment,GSE320505,GSE320505,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain metastasis,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,4.2590448484169405,platform_constant,4.2590448484169405,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41917370,10.1038/s42003-026-09915-1,GSM9544606,,,test,hesrt,samples/GSE320505/GSM9544606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9544607,brain,disease,cancer,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1986,Single cell and spatial sequencing analysis of cancer associated fibroblasts in the brain metastasis tumor microenvironment,GSE320505,GSE320505,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain metastasis,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,3.156752521821369,platform_constant,3.156752521821369,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41917370,10.1038/s42003-026-09915-1,GSM9544607,,,test,hesrt,samples/GSE320505/GSM9544607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9544608,brain,disease,cancer,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1244,Single cell and spatial sequencing analysis of cancer associated fibroblasts in the brain metastasis tumor microenvironment,GSE320505,GSE320505,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain metastasis,MONDO:0004992,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,18085,counts,pixel,2.6589954630020096,platform_constant,2.6589954630020096,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,41917370,10.1038/s42003-026-09915-1,GSM9544608,,,test,hesrt,samples/GSE320505/GSM9544608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9550333,head and neck,disease,squamous cell carcinoma,neck,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4822,Spatial transcriptomics of squamous cell carcinoma from different tissues,GSE321832,GSE321832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000974,Head and neck SCC,MONDO:0005096,luna,squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.941137261446226,platform_constant,3.941137261446226,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42045479,,GSM9550333,,,train,hesrt,samples/GSE321832/GSM9550333,sda-tissue-disease-2.3,"{""organ"": 0.5700000000000001, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9550334,oral cavity,disease,squamous cell carcinoma,oral cavity,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4772,Spatial transcriptomics of squamous cell carcinoma from different tissues,GSE321832,GSE321832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000167,Head and neck SCC,MONDO:0005096,luna,squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9548202836919932,platform_constant,3.9548202836919932,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42045479,,GSM9550334,,,train,hesrt,samples/GSE321832/GSM9550334,sda-tissue-disease-2.3,"{""organ"": 0.49, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9550335,lung,disease,squamous cell carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3639,Spatial transcriptomics of squamous cell carcinoma from different tissues,GSE321832,GSE321832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung SCC,MONDO:0005096,luna,squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,4.241973414479875,platform_constant,4.241973414479875,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42045479,,GSM9550335,,,train,hesrt,samples/GSE321832/GSM9550335,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9550336,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4454,Spatial transcriptomics of squamous cell carcinoma from different tissues,GSE321832,GSE321832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Cutaneous SCC,MONDO:0005096,luna,squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.9411372614462437,platform_constant,3.9411372614462437,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42045479,,GSM9550336,,,train,hesrt,samples/GSE321832/GSM9550336,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9550337,skin,disease,squamous cell carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4197,Spatial transcriptomics of squamous cell carcinoma from different tissues,GSE321832,GSE321832,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Cutaneous SCC,MONDO:0005096,luna,squamous cell carcinoma,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,17943,counts,pixel,3.954820283691993,platform_constant,3.954820283691993,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42045479,,GSM9550337,,,train,hesrt,samples/GSE321832/GSM9550337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9554204,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2340,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,GSE322553,GSE322553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon,MONDO:0024331,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.0553617278224445,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554204,,,train,sda-all,samples/GSE322553/GSM9554204,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9554205,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2946,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,GSE322553,GSE322553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon,MONDO:0024331,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.055087841822698,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554205,,,train,sda-all,samples/GSE322553/GSM9554205,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9554206,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2599,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,GSE322553,GSE322553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon,MONDO:0024331,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,3.9951305971689814,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554206,,,train,sda-all,samples/GSE322553/GSM9554206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9554207,colon,disease,colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3579,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,GSE322553,GSE322553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon,MONDO:0024331,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.4951335580794165,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554207,,,train,sda-all,samples/GSE322553/GSM9554207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9554208,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2410,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,GSE322553,GSE322553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver,MONDO:0007256,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.09934098262906,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554208,,,train,sda-all,samples/GSE322553/GSM9554208,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9554209,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2894,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,GSE322553,GSE322553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.582843221405757,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554209,,,train,sda-all,samples/GSE322553/GSM9554209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9554210,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4059,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer.,GSE322553,GSE322553,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,Lung,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.821470893274813,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9554210,,,train,sda-all,samples/GSE322553/GSM9554210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9555995,unknown,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,71030,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,GSE322640,GSE322640,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor needle biopsy,MONDO:0012817,luna,,Pre-treatment,luna,not stated,,not stated,,GSE322640:Patient 013,Patient 013,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,4.290532679596843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9555995,,,train,sda-all,samples/GSE322640/GSM9555995,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9555996,unknown,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,41222,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,GSE322640,GSE322640,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor needle biopsy,MONDO:0012817,luna,,Post-treatment,luna,not stated,,not stated,,GSE322640:Patient 013,Patient 013,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,5.270351529910533,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9555996,,,train,sda-all,samples/GSE322640/GSM9555996,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9555997,unknown,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,26164,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,GSE322640,GSE322640,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor needle biopsy,MONDO:0012817,luna,,Pre-treatment,luna,not stated,,not stated,,GSE322640:Patient 015,Patient 015,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,5.081076786406512,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9555997,,,train,sda-all,samples/GSE322640/GSM9555997,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9555998,unknown,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,27722,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,GSE322640,GSE322640,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor needle biopsy,MONDO:0012817,luna,,Post-treatment,luna,not stated,,not stated,,GSE322640:Patient 015,Patient 015,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.0077887847942075,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9555998,,,train,sda-all,samples/GSE322640/GSM9555998,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9555999,unknown,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,26680,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,GSE322640,GSE322640,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor needle biopsy,MONDO:0012817,luna,,Pre-treatment,luna,not stated,,not stated,,GSE322640:Patient 029,Patient 029,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,0.6984393995946648,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9555999,,,train,sda-all,samples/GSE322640/GSM9555999,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9556000,unknown,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,94034,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,GSE322640,GSE322640,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor needle biopsy,MONDO:0012817,luna,,Post-treatment,luna,not stated,,not stated,,GSE322640:Patient 029,Patient 029,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.8128428917950299,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9556000,,,train,sda-all,samples/GSE322640/GSM9556000,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9556001,unknown,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,46513,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,GSE322640,GSE322640,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor needle biopsy,MONDO:0012817,luna,,Pre-treatment,luna,not stated,,not stated,,GSE322640:Patient 032,Patient 032,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.712646016837286,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9556001,,,train,sda-all,samples/GSE322640/GSM9556001,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9556002,unknown,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,126298,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,GSE322640,GSE322640,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor needle biopsy,MONDO:0012817,luna,,Post-treatment,luna,not stated,,not stated,,GSE322640:Patient 032,Patient 032,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.434946199281248,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9556002,,,train,sda-all,samples/GSE322640/GSM9556002,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9556003,unknown,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,10355,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,GSE322640,GSE322640,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor needle biopsy,MONDO:0012817,luna,,Pre-treatment,luna,not stated,,not stated,,GSE322640:Patient 033,Patient 033,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.4368426842731106,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9556003,,,train,sda-all,samples/GSE322640/GSM9556003,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9556004,unknown,disease,Ewing sarcoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,13627,Trabectedin and low-dose irinotecan to target EWS::FLI1 in Ewing sarcoma: a phase 1/2 trial,GSE322640,GSE322640,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor needle biopsy,MONDO:0012817,luna,,Post-treatment,luna,not stated,,not stated,,GSE322640:Patient 033,Patient 033,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.4958132245300937,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41991689,,GSM9556004,,,train,sda-all,samples/GSE322640/GSM9556004,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9560411,oral cavity,normal,,dental pulp,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,759,Spatial Transcriptomics Analysis of inflamed versus healthy Dental Pulps,GSE322883,GSE322883,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001754,Dental pulp,,luna,,Normal dental pulp tissue,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,3.009729221589046,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9560411,,,train,sda-all,samples/GSE322883/GSM9560411,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9560412,oral cavity,disease,pulpitis,dental pulp,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1496,Spatial Transcriptomics Analysis of inflamed versus healthy Dental Pulps,GSE322883,GSE322883,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001754,Dental pulp,MONDO:0006937,luna,,Reversible pulpitis tissue,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,3.3582257442964054,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9560412,,,train,sda-all,samples/GSE322883/GSM9560412,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9560413,oral cavity,disease,pulpitis,dental pulp,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1091,Spatial Transcriptomics Analysis of inflamed versus healthy Dental Pulps,GSE322883,GSE322883,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001754,Dental pulp,MONDO:0006937,luna,,Irreversible pulpitis tissue sample 1,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,2.8588677680232957,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9560413,,,train,sda-all,samples/GSE322883/GSM9560413,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9560414,oral cavity,disease,pulpitis,dental pulp,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1170,Spatial Transcriptomics Analysis of inflamed versus healthy Dental Pulps,GSE322883,GSE322883,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001754,Dental pulp,MONDO:0006937,luna,,Irreversible pulpitis tissue sample 2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,2.7062391956799305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9560414,,,train,sda-all,samples/GSE322883/GSM9560414,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9561833,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,75396,Spatial Transcriptomic Analysis of a Human Bone Marrow Clot Biopsy Using Xenium 5K,GSE322974,GSE322974,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9858,counts,um,1.0,verified,0.49999761146496813,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41889971;42605801,,GSM9561833,,,train,sda-all,samples/GSE322974/GSM9561833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9564255,bone,disease,,bone element,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2212,Single-cell and Spatial Transcriptomic Profiling of the Bone Metastatic Microenvironment,GSE323357,GSE323357,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001474,bone metastatic tissue,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.647819262471229,platform_constant,4.647819262471229,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42108258,10.1038/s41392-026-02691-8,GSM9564255,,,test,hesrt,samples/GSE323357/GSM9564255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9564256,bone,disease,,bone element,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1869,Single-cell and Spatial Transcriptomic Profiling of the Bone Metastatic Microenvironment,GSE323357,GSE323357,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001474,bone metastatic tissue,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.670542648920101,platform_constant,4.670542648920101,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42108258,10.1038/s41392-026-02691-8,GSM9564256,,,test,hesrt,samples/GSE323357/GSM9564256,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9564257,bone,disease,,bone element,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2022,Single-cell and Spatial Transcriptomic Profiling of the Bone Metastatic Microenvironment,GSE323357,GSE323357,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001474,bone metastatic tissue,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.349174590541732,platform_constant,4.349174590541732,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42108258,10.1038/s41392-026-02691-8,GSM9564257,,,test,hesrt,samples/GSE323357/GSM9564257,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9564258,bone,disease,,bone element,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2153,Single-cell and Spatial Transcriptomic Profiling of the Bone Metastatic Microenvironment,GSE323357,GSE323357,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001474,bone metastatic tissue,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.649442589377819,platform_constant,4.649442589377819,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,42108258,10.1038/s41392-026-02691-8,GSM9564258,,,test,hesrt,samples/GSE323357/GSM9564258,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9567833,heart,perturbation,,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,77951,Integrated spatial transcriptomics (Stereo-seq) and bulk RNA-seq of cardiac sonogenetics in rodent heart tissue across time points [Stereo-seq],GSE324075,GSE324075,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Stereo-seq,,,bin,40628,counts,native_grid,,unresolved,,WITHHELD,,,hesrt_review_fail,,VERIFIED,,,,,,GSM9567833,,,val,sda-all,samples/GSE324075/GSM9567833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9568685,brain,normal,,hypothalamus,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,228180,Molecularly distinct subtypes of Lhx6-positive neurons of the zona incerta differentially regulate sleep pressure and recovery sleep,GSE324128,GSE324128,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001898,Hypothalamus,,luna,,"Mouse was housed in a climate-controlled pathogen-free facility and allowed food, water, and sleep ad libitum during lights on (6:30am-12:30pm). Euthanized after 6 hours (12:30pm).",luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,mBrain_100g,xenium-2.0.1.1,cell,541,counts,um,1.0,verified,0.5000103359735399,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9568685,,,train,sda-all,samples/GSE324128/GSM9568685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9570180,brain,normal,,pineal body,primary tissue,Macaca fascicularis,crab-eating macaque,adult,female,BMK S1000,BMKMANU S3000,False,,3591,Single-cell multi-omic and spatial landscape of primate pineal gland reveals circadian and melatonin regulatory architecture,GSE324158,GSE324158,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Macaca fascicularis,luna,UBERON:0001905,Pineal gland,,luna,,wild type,luna,adult,4 to 5 years,extracted field,female,,,,,release v3,sequencing-based,BMKMANU S3000,,,spot,38503,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9570180,,,train,sda-all,samples/GSE324158/GSM9570180,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9572842,brain,disease,glioblastoma,brain,organoid,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55343,Xenium single cell spatial transcriptomics from patient-derived glioblastoma organoid cultured on brain slice and a primary glioblastoma sample,GSE324268,GSE324268,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain,MONDO:0018177,luna,Glioblastoma,Patient-derived glioblastoma organoid culture,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999963480547304,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41951573,,GSM9572842,,,train,sda-all,samples/GSE324268/GSM9572842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9572843,brain,disease,glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,851509,Xenium single cell spatial transcriptomics from patient-derived glioblastoma organoid cultured on brain slice and a primary glioblastoma sample,GSE324268,GSE324268,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Bran,MONDO:0018177,luna,Glioblastoma,Primary glioblastoma,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999022673964033,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41951573,,GSM9572843,,,train,sda-all,samples/GSE324268/GSM9572843,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9575880,thymus,normal,,thymus,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,284484,Myasthenia thymus reprograms class switched B cells into BAFF dependent survivors,GSE324427,GSE324427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,Thymus,,luna,,,luna,not stated,,not stated,,,,FFPE,"formalin-fixed, paraffin-embedded",release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,42585334,,GSM9575880,,,val,sda-all,samples/GSE324427/GSM9575880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9575881,thymus,disease,,thymus,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,335590,Myasthenia thymus reprograms class switched B cells into BAFF dependent survivors,GSE324427,GSE324427,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002370,Thymus,,luna,,,luna,not stated,,not stated,,,,FFPE,"formalin-fixed, paraffin-embedded",release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,42585334,,GSM9575881,,,val,sda-all,samples/GSE324427/GSM9575881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.49, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9579206,eye,disease,retinal degeneration,eyeball of camera-type eye,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,7675,CD36-mediated lipid-accumulation in reactive microglia drives retinal degeneration through NLRP3-IL-1β pathway,GSE324535,GSE324535,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0010230,eyeball,MONDO:0004580,mondo_predicate (Luna: perturbation),,PBS/NaIO3,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,bin,24808,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9579206,,,train,sda-all,samples/GSE324535/GSM9579206,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9580061,other,normal,,,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1024,Spatial transcriptomic analysis of human iPSC-derived hemanoids at day 16 and day 28,GSE324601,GSE324601,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,iPSC derived organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19144,counts,um,1.0,verified,4.653535751993694,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9580061,,,train,sda-all,samples/GSE324601/GSM9580061,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9580062,other,normal,,,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1354,Spatial transcriptomic analysis of human iPSC-derived hemanoids at day 16 and day 28,GSE324601,GSE324601,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,iPSC derived organoids,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19144,counts,um,1.0,verified,4.654771039127052,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9580062,,,train,sda-all,samples/GSE324601/GSM9580062,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9588621,brain,normal,,brain,primary tissue,Mus musculus,house mouse,embryonic,unknown,Slide-seq,Slide-seq,False,,740571,Early lineage divergence segregates sensory-related and motor-associative identities in the thalamus [Spatial Transcriptomics E12],GSE324903,GSE324903,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Thalamus,,luna,,ICR/CD-1,age rule: embryonic day,embryonic,Embryonic day 12.5,not stated,,,,,,release v3,sequencing-based,Slide-seq,,,bead,31622,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9588621,,,train,sda-all,samples/GSE324903/GSM9588621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM9589058,airway,disease,head and neck squamous cell carcinoma;malignant tumor of neck,larynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,7727,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,GSE324934,GSE324934,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001737,larynx,MONDO:0010150;MONDO:0021310,luna,head and neck squamous cell carcinoma,Surgical resection,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000124295657938,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589058,,,val,sda-all,samples/GSE324934/GSM9589058,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.78, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9589059,airway,disease,head and neck squamous cell carcinoma;malignant tumor of neck,larynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,8377,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,GSE324934,GSE324934,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001737,larynx,MONDO:0010150;MONDO:0021310,luna,head and neck squamous cell carcinoma,Surgical resection,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999352599958563,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589059,,,val,sda-all,samples/GSE324934/GSM9589059,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.71, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589060,airway,disease,head and neck squamous cell carcinoma;malignant tumor of neck,larynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6826,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,GSE324934,GSE324934,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001737,larynx,MONDO:0010150;MONDO:0021310,luna,head and neck squamous cell carcinoma,Surgical resection,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999530992045615,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589060,,,val,sda-all,samples/GSE324934/GSM9589060,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.8, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9589061,airway,disease,head and neck squamous cell carcinoma;malignant tumor of neck,larynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,5389,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,GSE324934,GSE324934,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,uberon_chain,UBERON:0001737,larynx,MONDO:0010150;MONDO:0021310,luna,head and neck squamous cell carcinoma,Surgical resection,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000202429149797,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589061,,,val,sda-all,samples/GSE324934/GSM9589061,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589062,head and neck,disease,head and neck squamous cell carcinoma;malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,11845,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,GSE324934,GSE324934,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,oropharynx (p16 negative),MONDO:0010150;MONDO:0021310,luna,head and neck squamous cell carcinoma,Surgical resection,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589062,,,val,sda-all,samples/GSE324934/GSM9589062,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.78, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589063,head and neck,disease,head and neck squamous cell carcinoma;malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,5563,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,GSE324934,GSE324934,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,oropharynx (p16 negative),MONDO:0010150;MONDO:0021310,luna,head and neck squamous cell carcinoma,Surgical resection,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000188951490999,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589063,,,val,sda-all,samples/GSE324934/GSM9589063,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.84, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589064,head and neck,disease,head and neck squamous cell carcinoma;malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,77331,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,GSE324934,GSE324934,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,oropharynx (p16 negative),MONDO:0010150;MONDO:0021310,luna,head and neck squamous cell carcinoma,Surgical resection,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999821428571428,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589064,,,val,sda-all,samples/GSE324934/GSM9589064,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.76, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589065,head and neck,disease,head and neck squamous cell carcinoma;malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,18837,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,GSE324934,GSE324934,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,oropharynx (p16 negative),MONDO:0010150;MONDO:0021310,luna,head and neck squamous cell carcinoma,Surgical resection,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49993542686242526,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589065,,,val,sda-all,samples/GSE324934/GSM9589065,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9589066,head and neck,disease,head and neck squamous cell carcinoma;malignant tumor of neck,oropharynx,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,8552,Personalizing the treatment of head and neck cancer in vitro: The 3D-OTC model,GSE324934,GSE324934,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001729,oropharynx (p16 negative),MONDO:0010150;MONDO:0021310,luna,head and neck squamous cell carcinoma,Surgical resection,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000020703362227,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42035072,,GSM9589066,,,val,sda-all,samples/GSE324934/GSM9589066,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597725,brain,disease,,frontal lobe,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,996,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016525,Frontal lobe,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.164344073605525,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597725,,,test,sda-all,samples/GSE325196/GSM9597725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597726,brain,disease,melanoma,parietal lobe,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2671,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001872,Parietal lobe,MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.987627772452715,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597726,,,test,sda-all,samples/GSE325196/GSM9597726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597727,brain,disease,,cerebellum,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4569,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002037,Cerebellum,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.945723327863502,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597727,,,test,sda-all,samples/GSE325196/GSM9597727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597728,brain,disease,melanoma,frontal lobe,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3876,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016525,Frontal lobe,MONDO:0005105,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.938791738048153,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597728,,,test,sda-all,samples/GSE325196/GSM9597728,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.93, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9597729,brain,disease,sarcoma,frontal lobe,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,330,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016525,Frontal lobe,MONDO:0005089,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.147365724109828,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597729,,,test,sda-all,samples/GSE325196/GSM9597729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.45, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9597730,brain,disease,,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4607,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Parieto-occipital,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.231653436540452,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597730,,,test,sda-all,samples/GSE325196/GSM9597730,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9597731,brain,disease,,occipital lobe,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4436,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002021,Occipital lobe,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.990080584606434,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597731,,,test,sda-all,samples/GSE325196/GSM9597731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597732,brain,disease,non-small cell lung carcinoma,frontal lobe,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1151,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016525,Frontal lobe,MONDO:0005233,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.188247970211388,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597732,,,test,sda-all,samples/GSE325196/GSM9597732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.67, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9597733,brain,disease,,frontal lobe,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3735,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016525,Frontal lobe,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.142164831171729,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597733,,,test,sda-all,samples/GSE325196/GSM9597733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9597734,brain,disease,,frontal lobe,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,911,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0016525,Frontal lobe,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.148256329646038,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597734,,,test,sda-all,samples/GSE325196/GSM9597734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9597735,brain,disease,,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,1033,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.301601385555917,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597735,,,test,sda-all,samples/GSE325196/GSM9597735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.85, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9597736,brain,disease,,brain,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,2921,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases,GSE325196,GSE325196,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Parieto-occipital,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.562423792402263,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9597736,,,test,sda-all,samples/GSE325196/GSM9597736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9598481,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,129203,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,GSE325253,GSE325253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,control,vehicle,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,7237,counts,um,1.0,verified,0.5000079083122445,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598481,,,train,sda-all,samples/GSE325253/GSM9598481,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9598482,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,198127,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,GSE325253,GSE325253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,control,vehicle,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9078,counts,um,1.0,verified,0.49999942563065747,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598482,,,train,sda-all,samples/GSE325253/GSM9598482,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9598483,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,291340,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,GSE325253,GSE325253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,bleomycin,vehicle,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,12115,counts,um,1.0,verified,0.499992892220212,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598483,,,train,sda-all,samples/GSE325253/GSM9598483,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9598484,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,231097,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,GSE325253,GSE325253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,bleomycin,vehicle,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,12457,counts,um,1.0,verified,0.5000021781746896,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598484,,,train,sda-all,samples/GSE325253/GSM9598484,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9598485,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,189804,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,GSE325253,GSE325253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,bleomycin,AZD3965,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13471,counts,um,1.0,verified,0.5000076222832004,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598485,,,train,sda-all,samples/GSE325253/GSM9598485,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9598486,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,202740,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,GSE325253,GSE325253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,bleomycin,AZD3965,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13377,counts,um,1.0,verified,0.49999455646039276,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598486,,,train,sda-all,samples/GSE325253/GSM9598486,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9598487,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,155257,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,GSE325253,GSE325253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,bleomycin,VB124,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13221,counts,um,1.0,verified,0.5000012167226359,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598487,,,train,sda-all,samples/GSE325253/GSM9598487,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9598488,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,195012,Xenium spatial transcriptomic profiling of mouse lung following pharmacologic inhibition of lactate transport during fibrotic remodeling,GSE325253,GSE325253,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,lung,,luna,bleomycin,VB124,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13534,counts,um,1.0,verified,0.5000057434295166,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,42090478,,GSM9598488,,,train,sda-all,samples/GSE325253/GSM9598488,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9601958,plant,perturbation,,,primary tissue,Solanum lycopersicum,tomato,not stated,unknown,BMK S1000,BMKMANU S1000,False,,4362,SlCAX3 drives the formation of crystal idioblasts for tomato ion compartmentalization under salt stress,GSE325371,GSE325371,4081,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,luna,,leaf,,luna,,Long term salt stress,luna,not stated,,not stated,,,,,,release v3,sequencing-based,BMK-S1000,,,spot,19294,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9601958,,,train,sda-all,samples/GSE325371/GSM9601958,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": NaN, ""life_stage"": 0.6900000000000001}",disease_status,low_confidence_annotation
GSM9601959,plant,perturbation,,,primary tissue,Solanum lycopersicum,tomato,not stated,unknown,BMK S1000,BMKMANU S1000,False,,3620,SlCAX3 drives the formation of crystal idioblasts for tomato ion compartmentalization under salt stress,GSE325371,GSE325371,4081,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,luna,,leaf,,luna,,Long term salt stress,luna,not stated,,not stated,,,,,,release v3,sequencing-based,BMK-S1000,,,spot,19189,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9601959,,,train,sda-all,samples/GSE325371/GSM9601959,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": NaN, ""life_stage"": 0.67}",disease_status,low_confidence_annotation
GSM9601960,plant,perturbation,,,primary tissue,Solanum lycopersicum,tomato,not stated,unknown,BMK S1000,BMKMANU S1000,False,,4673,SlCAX3 drives the formation of crystal idioblasts for tomato ion compartmentalization under salt stress,GSE325371,GSE325371,4081,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,luna,,leaf,,luna,,Long term salt stress,luna,not stated,,not stated,,,,,,release v3,sequencing-based,BMK-S1000,,,spot,21184,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9601960,,,train,sda-all,samples/GSE325371/GSM9601960,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": NaN, ""life_stage"": 0.92}",,
GSM9601961,plant,perturbation,,,primary tissue,Solanum lycopersicum,tomato,not stated,unknown,BMK S1000,BMKMANU S1000,False,,3695,SlCAX3 drives the formation of crystal idioblasts for tomato ion compartmentalization under salt stress,GSE325371,GSE325371,4081,Solanum lycopersicum,4081,,False,False,GEO organism field,Solanum lycopersicum,,luna,,leaf,,luna,,Long term salt stress,luna,not stated,,not stated,,,,,,release v3,sequencing-based,BMK-S1000,,,spot,19860,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9601961,,,train,sda-all,samples/GSE325371/GSM9601961,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.47000000000000003, ""uberon"": NaN, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM9604821,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,172722,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens,GSE325489,GSE325489,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,,luna,not stated,,not stated,,GSE325489:Br6522,Br6522,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999989173739823,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42385698,,GSM9604821,,,train,sda-all,samples/GSE325489/GSM9604821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9604822,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,228127,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens,GSE325489,GSE325489,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,,luna,not stated,,not stated,,GSE325489:Br2720,Br2720,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000091899094794,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42385698,,GSM9604822,,,train,sda-all,samples/GSE325489/GSM9604822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9604823,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,195980,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens,GSE325489,GSE325489,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,,luna,not stated,,not stated,,GSE325489:Br6432,Br6432,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000075496117342,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42385698,,GSM9604823,,,train,sda-all,samples/GSE325489/GSM9604823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9604824,brain,normal,,nucleus accumbens,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,188503,Spatiomolecular mapping reveals anatomical organization of heterogeneous cell types in the human nucleus accumbens,GSE325489,GSE325489,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001882,nucleus accumbens,,luna,,,luna,not stated,,not stated,,GSE325489:Br6471,Br6471,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999621883237544,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42385698,,GSM9604824,,,train,sda-all,samples/GSE325489/GSM9604824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9608398,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2453,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],GSE325554,GSE325554,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,fresh frozen brain,,luna,,Vechicle (DMSO+saline),age rule: age with unit,adult,9–10 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.135561133244332,platform_constant,4.135561133244332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608398,,,train,hesrt,samples/GSE325554/GSM9608398,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.12, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9608399,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2700,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],GSE325554,GSE325554,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,fresh frozen brain,,luna,,Vechicle (DMSO+saline),age rule: age with unit,adult,9–10 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.134555868077988,platform_constant,4.134555868077988,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608399,,,train,hesrt,samples/GSE325554/GSM9608399,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.2, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9608400,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2636,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],GSE325554,GSE325554,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,fresh frozen brain,,luna,,Pacitaxel,age rule: age with unit,adult,9–10 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.134555868077998,platform_constant,4.134555868077998,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608400,,,train,hesrt,samples/GSE325554/GSM9608400,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9608401,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2770,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],GSE325554,GSE325554,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,fresh frozen brain,,luna,,Pacitaxel,age rule: age with unit,adult,9–10 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.134555868077998,platform_constant,4.134555868077998,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608401,,,train,hesrt,samples/GSE325554/GSM9608401,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9608402,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2944,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],GSE325554,GSE325554,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,fresh frozen brain,,luna,,Pacitaxel+ABT263,age rule: age with unit,adult,9–10 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.135561133244332,platform_constant,4.135561133244332,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608402,,,train,hesrt,samples/GSE325554/GSM9608402,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9608403,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2824,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],GSE325554,GSE325554,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,fresh frozen brain,,luna,,Pacitaxel+ABT263,age rule: age with unit,adult,9–10 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.134555868077991,platform_constant,4.134555868077991,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608403,,,train,hesrt,samples/GSE325554/GSM9608403,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9608404,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2842,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],GSE325554,GSE325554,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,fresh frozen brain,,luna,,Pacitaxel+GCV,age rule: age with unit,adult,9–10 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.135561133244344,platform_constant,4.135561133244344,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608404,,,train,hesrt,samples/GSE325554/GSM9608404,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9608405,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2927,Accelerated cerebromicrovascular senescence contributes to cognitive decline in a mouse model of paclitaxel (Taxol)-induced chemobrain [Spatial Transcriptomics],GSE325554,GSE325554,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,fresh frozen brain,,luna,,Pacitaxel+GCV,age rule: age with unit,adult,9–10 months,extracted field,male,,,,,release v3,sequencing-based,10x Genomics Visium,,,spot,32285,counts,pixel,4.133550666580125,platform_constant,4.133550666580125,HESRT_HUMAN_REVIEW,,,,,human_visual_review,,,,37243381,10.1111/acel.13832,GSM9608405,,,train,hesrt,samples/GSE325554/GSM9608405,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9609021,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,21569,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,GSE325587,GSE325587,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney cortex,,luna,Non-disease control,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1008,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609021,,,train,sda-all,samples/GSE325587/GSM9609021,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9609023,kidney,disease,diabetic kidney disease;diabetes mellitus,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,39162,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,GSE325587,GSE325587,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney cortex,MONDO:0005016;MONDO:0005015,luna,Class II,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1008,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609023,,,train,sda-all,samples/GSE325587/GSM9609023,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9609025,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,23284,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,GSE325587,GSE325587,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney cortex,,luna,Non-disease control,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1008,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609025,,,train,sda-all,samples/GSE325587/GSM9609025,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9609028,kidney,disease,diabetic kidney disease;diabetes mellitus,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,15381,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,GSE325587,GSE325587,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney cortex,MONDO:0005016;MONDO:0005015,luna,Class III,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1008,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609028,,,train,sda-all,samples/GSE325587/GSM9609028,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9609029,kidney,normal,,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,16434,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,GSE325587,GSE325587,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney cortex,,luna,Non-disease control,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1008,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609029,,,train,sda-all,samples/GSE325587/GSM9609029,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9609031,kidney,disease,diabetic kidney disease;diabetes mellitus,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,15315,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,GSE325587,GSE325587,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney cortex,MONDO:0005016;MONDO:0005015,luna,Class II,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1008,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609031,,,train,sda-all,samples/GSE325587/GSM9609031,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9609033,kidney,disease,kidney cortex disease;diabetic kidney disease;diabetes mellitus,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,9780,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,GSE325587,GSE325587,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney cortex,MONDO:0850150;MONDO:0005016;MONDO:0005015,luna,Class IV,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1008,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609033,,,train,sda-all,samples/GSE325587/GSM9609033,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9609034,kidney,disease,diabetic kidney disease;diabetes mellitus,cortex of kidney,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,18723,Spatial transcriptomics identifies IL-32 as a lipid droplet-associated cytokine linked to tubular injury in human diabetic kidney disease,GSE325587,GSE325587,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001225,Kidney cortex,MONDO:0005016;MONDO:0005015,luna,Class IV,,luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1008,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41324332;41653322,,GSM9609034,,,train,sda-all,samples/GSE325587/GSM9609034,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9610990,lung,disease,,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),5543,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial [ASPS-02_VisiumHD],GSE325706,GSE325706,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,ASPS lung needle biopsy,,luna,,Pre-Treatment Biopsy,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18086,counts,um,1.0,verified,0.5000133852109071,VERIFIED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,,,GSM9610990,,,train,sda-all,samples/GSE325706/GSM9610990,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9610991,lung,disease,,lung,metastasis,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),9750,GPNMB as a viable CAR Target for MITF pathognomonic fusion-driven cancers: A first-in-person GCAR1 Trial [ASPS-02_VisiumHD],GSE325706,GSE325706,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,ASPS lung needle biopsy,,luna,,Post-Treatment Biopsy,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18086,counts,um,1.0,verified,1.110673810503713,VERIFIED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,,,GSM9610991,,,train,sda-all,samples/GSE325706/GSM9610991,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9612563,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1170,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Primary Colon cancer,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.904371253389424,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612563,,,train,sda-all,samples/GSE325755/GSM9612563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9612564,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),528,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Primary Colon cancer,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.908988130685456,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612564,,,train,sda-all,samples/GSE325755/GSM9612564,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9612565,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),603,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Primary Colon cancer,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.905506233434166,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612565,,,train,sda-all,samples/GSE325755/GSM9612565,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9612566,peritoneum,disease,malignant colon neoplasm,mesentery,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1406,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002095,Mesentery Metastasis,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.882858823405881,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612566,,,train,sda-all,samples/GSE325755/GSM9612566,sda-tissue-disease-2.3,"{""organ"": 0.65, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9612567,peritoneum,disease,malignant colon neoplasm,peritoneum,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),829,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Omental Metastasis,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.876305900488803,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612567,,,train,sda-all,samples/GSE325755/GSM9612567,sda-tissue-disease-2.3,"{""organ"": 0.85, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9612568,peritoneum,disease,malignant colon neoplasm,peritoneum,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),2562,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002358,Omental Metastasis,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.263409988037273,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612568,,,train,sda-all,samples/GSE325755/GSM9612568,sda-tissue-disease-2.3,"{""organ"": 0.76, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9612569,peritoneum,disease,malignant colon neoplasm,mesentery,metastasis,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1794,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002095,Mesentery Metastasis,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.269962465491702,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612569,,,train,sda-all,samples/GSE325755/GSM9612569,sda-tissue-disease-2.3,"{""organ"": 0.58, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9612570,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),489,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Primary Colon cancer,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.9189140540657785,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612570,,,train,sda-all,samples/GSE325755/GSM9612570,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9612571,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1629,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Primary Colon cancer,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.948862900431554,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612571,,,train,sda-all,samples/GSE325755/GSM9612571,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9612572,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1267,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Primary Colon cancer,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.922388940809703,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612572,,,train,sda-all,samples/GSE325755/GSM9612572,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9612573,colon,disease,malignant colon neoplasm,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1496,Spatial membrane lipid remodeling encodes epithelial lineage and state in human colon cancer,GSE325755,GSE325755,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Primary Colon cancer,MONDO:0021063,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.013204729998571,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9612573,,,train,sda-all,samples/GSE325755/GSM9612573,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9613077,lung,disease,lung cancer,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,123573,Multiomics immune profiling of a patient-relevant orthotopic lung cancer model using SEPARATE-Seq [MERSCOPE],GSE325769,GSE325769,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,tumour-bearing lung,MONDO:0008903,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,42026061,,GSM9613077,,,train,sda-all,samples/GSE325769/GSM9613077,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9613078,lung,disease,lung cancer,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,165382,Multiomics immune profiling of a patient-relevant orthotopic lung cancer model using SEPARATE-Seq [MERSCOPE],GSE325769,GSE325769,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,tumour-bearing lung,MONDO:0008903,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,315,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,,VERIFIED,,,,42026061,,GSM9613078,,,train,sda-all,samples/GSE325769/GSM9613078,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9613504,other,normal,,superior cervical ganglion,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,9822,Circuit Organization and Transcriptomic Heterogeneity of Sympathetic Circuits Innervating Cranial Structures [MERFISH],GSE325797,GSE325797,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001989,Whole ganglion,,luna,,wild-type mice dissected at P14,luna,neonatal or infant,,not stated,,,,fixed frozen,fixed-frozen,release v3,imaging-based,MERSCOPE,,,cell,123,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9613504,,,train,sda-all,samples/GSE325797/GSM9613504,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9613505,other,normal,,superior cervical ganglion,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,22308,Circuit Organization and Transcriptomic Heterogeneity of Sympathetic Circuits Innervating Cranial Structures [MERFISH],GSE325797,GSE325797,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001989,Whole ganglion,,luna,,wild-type mice CTB injected at P10 and dissected at P14,luna,neonatal or infant,,not stated,,,,fixed frozen,fixed-frozen,release v3,imaging-based,MERSCOPE,,,cell,123,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9613505,,,train,sda-all,samples/GSE325797/GSM9613505,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 0.99, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9613870,brain,disease,stroke disorder;glioma,brain,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2206,Stroke drives glioma progression through remodeling of the tumor microenvironment [Spatial Transcriptomics],GSE325817,GSE325817,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0005098;MONDO:0021042,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,visium,,,spot,19465,counts,um,1.0,verified,6.9770723809303155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9613870,,,train,sda-all,samples/GSE325817/GSM9613870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.97, ""life_stage"": 0.62}",,
GSM9615445,small intestine,normal,,intestine,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,1892,Spatial transcriptomic analysis of rat gut tissue reveals transcriptional changes associated with high-fat diet and tirzepatide treatment,GSE325846,GSE325846,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000160,gut,,luna,,Chow diet + PBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,23098,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9615445,,,train,sda-all,samples/GSE325846/GSM9615445,sda-tissue-disease-2.4,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.81, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9615446,small intestine,perturbation,,intestine,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,1092,Spatial transcriptomic analysis of rat gut tissue reveals transcriptional changes associated with high-fat diet and tirzepatide treatment,GSE325846,GSE325846,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000160,gut,,luna,,Chow diet + tirzepatide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,23098,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9615446,,,train,sda-all,samples/GSE325846/GSM9615446,sda-tissue-disease-2.4,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.73, ""life_stage"": 0.9500000000000001}",,
GSM9615447,small intestine,perturbation,,intestine,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,1490,Spatial transcriptomic analysis of rat gut tissue reveals transcriptional changes associated with high-fat diet and tirzepatide treatment,GSE325846,GSE325846,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000160,gut,,luna,,High fat diet + PBS,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,23098,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9615447,,,train,sda-all,samples/GSE325846/GSM9615447,sda-tissue-disease-2.4,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.93, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9615448,small intestine,perturbation,,intestine,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Visium,Visium,False,,1421,Spatial transcriptomic analysis of rat gut tissue reveals transcriptional changes associated with high-fat diet and tirzepatide treatment,GSE325846,GSE325846,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0000160,gut,,luna,,High fat diet + tirzepatide,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,23098,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9615448,,,train,sda-all,samples/GSE325846/GSM9615448,sda-tissue-disease-2.4,"{""organ"": 0.47000000000000003, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.96, ""life_stage"": 0.99}",organ,low_confidence_annotation
GSM9615736,liver,disease,primary sclerosing cholangitis;autoimmune pancreatitis;inflammatory bowel disease,liver,primary tissue,Homo sapiens,human,juvenile,female,MERFISH/MERSCOPE,MERSCOPE,False,,67674,Macrophage signaling associates with fibrogenic program activation in periductal fibroblasts in pediatric primary sclerosing cholangitis.,GSE325861,GSE325861,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,MONDO:0013433;MONDO:0015175;MONDO:0005265,luna,primary sclerosing cholangitis,,luna,juvenile,10-year-old,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,461,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9615736,,,test,sda-all,samples/GSE325861/GSM9615736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9615737,liver,disease,primary sclerosing cholangitis,liver,primary tissue,Homo sapiens,human,juvenile,male,MERFISH/MERSCOPE,MERSCOPE,False,,72536,Macrophage signaling associates with fibrogenic program activation in periductal fibroblasts in pediatric primary sclerosing cholangitis.,GSE325861,GSE325861,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Liver,MONDO:0013433,luna,primary sclerosing cholangitis,,luna,juvenile,12-year-old,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,461,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9615737,,,test,sda-all,samples/GSE325861/GSM9615737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616841,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,female,Molecular Cartography,Molecular Cartography,False,,8589,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,adult,14months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,91,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616841,,,train,sda-all,samples/GSE325911/GSM9616841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616842,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,female,Molecular Cartography,Molecular Cartography,False,,3488,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,adult,14months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,81,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616842,,,train,sda-all,samples/GSE325911/GSM9616842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616843,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,female,Molecular Cartography,Molecular Cartography,False,,2457,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,adult,14months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,83,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616843,,,train,sda-all,samples/GSE325911/GSM9616843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616844,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,male,Molecular Cartography,Molecular Cartography,False,,4335,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,adult,14months,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,99,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616844,,,train,sda-all,samples/GSE325911/GSM9616844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616845,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,male,Molecular Cartography,Molecular Cartography,False,,1639,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,adult,14months,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,89,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616845,,,train,sda-all,samples/GSE325911/GSM9616845,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616846,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,male,Molecular Cartography,Molecular Cartography,False,,3289,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,adult,14months,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,101,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616846,,,train,sda-all,samples/GSE325911/GSM9616846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616847,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,aged,female,Molecular Cartography,Molecular Cartography,False,,2438,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,aged,24months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,106,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616847,,,train,sda-all,samples/GSE325911/GSM9616847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616848,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,aged,female,Molecular Cartography,Molecular Cartography,False,,2995,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,aged,24months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,102,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616848,,,train,sda-all,samples/GSE325911/GSM9616848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616849,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,aged,female,Molecular Cartography,Molecular Cartography,False,,6757,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,aged,24months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,107,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616849,,,train,sda-all,samples/GSE325911/GSM9616849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616850,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,aged,male,Molecular Cartography,Molecular Cartography,False,,6851,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,aged,24months,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,112,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616850,,,train,sda-all,samples/GSE325911/GSM9616850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616851,brain,disease,amyloidosis,cerebral cortex,primary tissue,Mus musculus,house mouse,aged,male,Molecular Cartography,Molecular Cartography,False,,12909,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065,luna,,APP23 heterozygous,age rule: age with unit,aged,24months,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,116,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616851,,,train,sda-all,samples/GSE325911/GSM9616851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616852,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,female,Molecular Cartography,Molecular Cartography,False,,7653,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,,luna,,APP23 wildtype,age rule: age with unit,adult,14months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,86,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616852,,,train,sda-all,samples/GSE325911/GSM9616852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616853,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,female,Molecular Cartography,Molecular Cartography,False,,2063,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,,luna,,APP23 wildtype,age rule: age with unit,adult,14months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,62,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616853,,,train,sda-all,samples/GSE325911/GSM9616853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9616854,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,female,Molecular Cartography,Molecular Cartography,False,,2146,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,,luna,,APP23 wildtype,age rule: age with unit,adult,14months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,77,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616854,,,train,sda-all,samples/GSE325911/GSM9616854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616855,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,male,Molecular Cartography,Molecular Cartography,False,,7200,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,,luna,,APP23 wildtype,age rule: age with unit,adult,14months,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,83,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616855,,,train,sda-all,samples/GSE325911/GSM9616855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616856,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,male,Molecular Cartography,Molecular Cartography,False,,3828,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,,luna,,APP23 wildtype,age rule: age with unit,adult,14months,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,81,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616856,,,train,sda-all,samples/GSE325911/GSM9616856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616857,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,adult,male,Molecular Cartography,Molecular Cartography,False,,3041,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,,luna,,APP23 wildtype,age rule: age with unit,adult,14months,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,77,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616857,,,train,sda-all,samples/GSE325911/GSM9616857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9616858,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,aged,female,Molecular Cartography,Molecular Cartography,False,,7546,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,,luna,,APP23 wildtype,age rule: age with unit,aged,24months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,109,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616858,,,train,sda-all,samples/GSE325911/GSM9616858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616859,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,aged,female,Molecular Cartography,Molecular Cartography,False,,5111,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,,luna,,APP23 wildtype,age rule: age with unit,aged,24months,extracted field,female,,,,,release v3,imaging-based,Molecular Cartography,,,cell,108,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616859,,,train,sda-all,samples/GSE325911/GSM9616859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616860,brain,normal,,cerebral cortex,primary tissue,Mus musculus,house mouse,aged,male,Molecular Cartography,Molecular Cartography,False,,4998,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,,luna,,APP23 wildtype,age rule: age with unit,aged,24months,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,109,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616860,,,train,sda-all,samples/GSE325911/GSM9616860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616861,brain,disease,,cerebral cortex,primary tissue,Mus musculus,house mouse,aged,male,Molecular Cartography,Molecular Cartography,False,,5513,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000956,cerebral cortex,,luna,,APP23 wildtype,age rule: age with unit,aged,24months,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,110,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9616861,,,train,sda-all,samples/GSE325911/GSM9616861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9616862,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,5060,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,70years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,94,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616862,,,train,sda-all,samples/GSE325911/GSM9616862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616863,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,4039,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,70years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,89,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616863,,,train,sda-all,samples/GSE325911/GSM9616863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616864,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,9131,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,79years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,90,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616864,,,train,sda-all,samples/GSE325911/GSM9616864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616865,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,3601,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,77years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,87,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616865,,,train,sda-all,samples/GSE325911/GSM9616865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616866,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,3720,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,77years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,85,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616866,,,train,sda-all,samples/GSE325911/GSM9616866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616867,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,3641,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,76years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,95,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616867,,,train,sda-all,samples/GSE325911/GSM9616867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616868,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,3375,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,76years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,96,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616868,,,train,sda-all,samples/GSE325911/GSM9616868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616869,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,3147,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,76years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,92,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616869,,,train,sda-all,samples/GSE325911/GSM9616869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616870,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,5122,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,70years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,93,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616870,,,train,sda-all,samples/GSE325911/GSM9616870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616871,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,4550,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,70years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,86,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616871,,,train,sda-all,samples/GSE325911/GSM9616871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616872,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,6666,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,79years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,82,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616872,,,train,sda-all,samples/GSE325911/GSM9616872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616873,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,3097,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,77years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,87,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616873,,,train,sda-all,samples/GSE325911/GSM9616873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616874,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,5089,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,77years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,89,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616874,,,train,sda-all,samples/GSE325911/GSM9616874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9616875,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,4906,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,76years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,98,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616875,,,train,sda-all,samples/GSE325911/GSM9616875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616876,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,3161,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,76years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,87,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616876,,,train,sda-all,samples/GSE325911/GSM9616876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9616877,brain,disease,amyloidosis;Alzheimer disease,cerebral cortex,primary tissue,Homo sapiens,human,aged,male,Molecular Cartography,Molecular Cartography,False,,2041,Type-I Interferon drives T-cell responses to amyloid-beta in the central nervous system,GSE325911,GSE325911,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000956,cerebral cortex,MONDO:0019065;MONDO:0004975,luna,Alzheimer’s disease,,age rule: age in years,aged,76years,extracted field,male,,,,,release v3,imaging-based,Molecular Cartography,,,cell,80,counts,pixel,,unresolved,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9616877,,,train,sda-all,samples/GSE325911/GSM9616877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9617482,brain,disease,,brain,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,386809,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases [Xenium],GSE325935,GSE325935,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain,,luna,,ER+/PR-/HER2+ BC,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999424546542676,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9617482,,,train,sda-all,samples/GSE325935/GSM9617482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9617483,brain,disease,,brain,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,490687,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases [Xenium],GSE325935,GSE325935,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain,,luna,,ER-/PR-/HER2- BC,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000086278299282,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9617483,,,train,sda-all,samples/GSE325935/GSM9617483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9617484,brain,disease,,brain,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,448149,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases [Xenium],GSE325935,GSE325935,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Parieto-occipital,,luna,,ER+/PR-/HER2+ BC,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000034522439586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9617484,,,train,sda-all,samples/GSE325935/GSM9617484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9617485,brain,disease,,brain,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,207277,Single Nuclei and Spatial Transcriptomic Datasets in Brain Metastases [Xenium],GSE325935,GSE325935,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain,,luna,,ER-/PR-/HER2- BC,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000116525972345,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9617485,,,train,sda-all,samples/GSE325935/GSM9617485,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9618437,adrenal gland,disease,adrenal gland neoplasm,adrenal gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,699798,High-resolution spatial transcriptomics of human adrenal neoplasms,GSE325991,GSE325991,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002369,TUMOR,MONDO:0021227,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,,WITHHELD,ABSENT,ABSENT,hesrt_review_fail,,VERIFIED,PASS,,,,,GSM9618437,,,train,sda-all,samples/GSE325991/GSM9618437,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9618494,brain,disease,cerebellar neoplasm;breast cancer,cerebellum,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3406,Interleukin-34 induced Arg1+ macrophages play a key role in breast cancer brain metastasis,GSE325996,GSE325996,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,mouse cerebellum tissue,MONDO:0002913;MONDO:0007254,luna,,NO treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.164517589590606,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42166785,,GSM9618494,,,train,sda-all,samples/GSE325996/GSM9618494,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.84, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9618495,brain,disease,cerebellar neoplasm;breast cancer,cerebellum,metastasis,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4017,Interleukin-34 induced Arg1+ macrophages play a key role in breast cancer brain metastasis,GSE325996,GSE325996,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,mouse cerebellum tissue,MONDO:0002913;MONDO:0007254,luna,,NO treatment,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,10.32374001995803,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42166785,,GSM9618495,,,train,sda-all,samples/GSE325996/GSM9618495,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.74, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9622152,skin,disease,vitiligo,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),117559,Aberrant laminin signaling drives melanocyte dedifferentiation and unveils a tractable therapeutic target in vitiligo,GSE326094,GSE326094,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0008661,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium_hd,,,bin,18085,counts,um,1.0,verified,2.6603531619920524,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,41997929,,GSM9622152,,,train,sda-all,samples/GSE326094/GSM9622152,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9625200,oral cavity,normal,,molar tooth,primary tissue,Mus musculus,house mouse,juvenile,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),216197,Wnt-dependent ontogeny of acellular cementum-forming cementoblasts on the tooth root surface,GSE326204,GSE326204,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0003655,Molars,,luna,,C57BL6,age rule: postnatal day,juvenile,P25,not stated,,,,,,release v3,sequencing-based,VisiumHD,,,bin,19059,counts,um,1.0,verified,1.3412087966431654,VERIFIED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42129164,,GSM9625200,,,test,sda-all,samples/GSE326204/GSM9625200,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.89, ""life_stage"": 0.6900000000000001}",,
GSM9625559,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,29816,A Xenium Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities,GSE326226,GSE326226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder,MONDO:0004992,luna,bladder cancer,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000025815778604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9625559,,,train,sda-all,samples/GSE326226/GSM9625559,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9625560,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,22095,A Xenium Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities,GSE326226,GSE326226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder,MONDO:0004992,luna,bladder cancer,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000103382681332,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9625560,,,train,sda-all,samples/GSE326226/GSM9625560,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9625561,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,42825,A Xenium Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities,GSE326226,GSE326226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder,MONDO:0004992,luna,bladder cancer,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000147284081536,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9625561,,,train,sda-all,samples/GSE326226/GSM9625561,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9625562,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16587,A Xenium Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities,GSE326226,GSE326226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder,MONDO:0004992,luna,bladder cancer,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9625562,,,train,sda-all,samples/GSE326226/GSM9625562,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9625563,bladder,disease,cancer,urinary bladder,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,20552,A Xenium Spatial Atlas of Muscle-Invasive Bladder Cancer Reveals Lineage-Specific Vulnerabilities,GSE326226,GSE326226,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,bladder,MONDO:0004992,luna,bladder cancer,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000122125356982,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9625563,,,train,sda-all,samples/GSE326226/GSM9625563,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9632804,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,False,,113800,Integrative single cell RNA and spatial profiling identify mechanisms of neonatal brain hemorrhage pathophysiology and repair [Xenium],GSE326496,GSE326496,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,Control,luna,neonatal or infant,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,5106,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41353666,,GSM9632804,,,train,sda-all,samples/GSE326496/GSM9632804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9632805,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,Xenium,Xenium,False,,101052,Integrative single cell RNA and spatial profiling identify mechanisms of neonatal brain hemorrhage pathophysiology and repair [Xenium],GSE326496,GSE326496,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,Mutant,luna,neonatal or infant,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,5106,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,41353666,,GSM9632805,,,train,sda-all,samples/GSE326496/GSM9632805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9634314,brain,disease,opiate dependence,brain,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,False,,277490,"Spatial transcriptomics reveals distinct cell type dynamics following opioid dependence in female mice with the common human mu-opioid receptor variant, Oprm1 A118G",GSE326553,GSE326553,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain coronal section,MONDO:0005530,mondo_predicate (Luna: perturbation),,"Chronic morphine or saline (3 mice: 1 SAL, 2 MOR)",luna,adult,8 weeks at start of treatment,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1001,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42637754,,GSM9634314,,,val,sda-all,samples/GSE326553/GSM9634314,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9634315,brain,disease,opiate dependence,brain,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,False,,237777,"Spatial transcriptomics reveals distinct cell type dynamics following opioid dependence in female mice with the common human mu-opioid receptor variant, Oprm1 A118G",GSE326553,GSE326553,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain coronal section,MONDO:0005530,mondo_predicate (Luna: perturbation),,"Chronic morphine or saline (3 mice: 1 SAL, 2 MOR)",luna,adult,8 weeks at start of treatment,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1001,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42637754,,GSM9634315,,,val,sda-all,samples/GSE326553/GSM9634315,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9634316,brain,disease,opiate dependence,brain,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,False,,210385,"Spatial transcriptomics reveals distinct cell type dynamics following opioid dependence in female mice with the common human mu-opioid receptor variant, Oprm1 A118G",GSE326553,GSE326553,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain coronal section,MONDO:0005530,mondo_predicate (Luna: perturbation),,"Chronic morphine or saline (3 mice: 2 SAL, 1 MOR)",luna,adult,8 weeks at start of treatment,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1001,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42637754,,GSM9634316,,,val,sda-all,samples/GSE326553/GSM9634316,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.87}",,
GSM9634317,brain,disease,drug dependence,brain,primary tissue,Mus musculus,house mouse,adult,female,CosMx,CosMx,False,,223485,"Spatial transcriptomics reveals distinct cell type dynamics following opioid dependence in female mice with the common human mu-opioid receptor variant, Oprm1 A118G",GSE326553,GSE326553,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain coronal section,MONDO:0005303,mondo_predicate (Luna: perturbation),,"Chronic morphine or saline (3 mice: 2 SAL, 1 MOR)",luna,adult,8 weeks at start of treatment,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1001,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42637754,,GSM9634317,,,val,sda-all,samples/GSE326553/GSM9634317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.9500000000000001}",,
GSM9635995,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E-like (heuristic),3712,Spatial transcriptomic analysis of mouse liver in a high-fat diet model with kimchi supplementation,GSE326636,GSE326636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Mouse Liver,,luna,,HFD,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,5.66496989563771,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9635995,,,train,sda-all,samples/GSE326636/GSM9635995,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9635996,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E-like (heuristic),2967,Spatial transcriptomic analysis of mouse liver in a high-fat diet model with kimchi supplementation,GSE326636,GSE326636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Mouse Liver,,luna,,HFD + S-K,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.136659912753644,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9635996,,,train,sda-all,samples/GSE326636/GSM9635996,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9635997,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E-like (heuristic),3062,Spatial transcriptomic analysis of mouse liver in a high-fat diet model with kimchi supplementation,GSE326636,GSE326636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Mouse Liver,,luna,,ND,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.611785900747129,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9635997,,,train,sda-all,samples/GSE326636/GSM9635997,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9635998,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E-like (heuristic),2760,Spatial transcriptomic analysis of mouse liver in a high-fat diet model with kimchi supplementation,GSE326636,GSE326636,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,Mouse Liver,,luna,,HFD + LMS-K,luna,not stated,,extracted field,male,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.547579334252316,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9635998,,,train,sda-all,samples/GSE326636/GSM9635998,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9636011,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,23784,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",GSE326639,GSE326639+GSE326753,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13458,counts,um,1.0,verified,0.5000044386577499,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636011,,,train,sda-all,samples/GSE326639/GSM9636011,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636012,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,41266,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",GSE326639,GSE326639+GSE326753,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13458,counts,um,1.0,verified,0.5000089779005524,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636012,,,train,sda-all,samples/GSE326639/GSM9636012,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636013,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,45342,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",GSE326639,GSE326639+GSE326753,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13458,counts,um,1.0,verified,0.5000103657974754,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636013,,,train,sda-all,samples/GSE326639/GSM9636013,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636014,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,45338,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",GSE326639,GSE326639+GSE326753,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13458,counts,um,1.0,verified,0.500010366652117,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636014,,,train,sda-all,samples/GSE326639/GSM9636014,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636015,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,128850,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",GSE326639,GSE326639+GSE326753,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13458,counts,um,1.0,verified,0.5000016370541756,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636015,,,train,sda-all,samples/GSE326639/GSM9636015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM9636016,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,56833,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",GSE326639,GSE326639+GSE326753,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13458,counts,um,1.0,verified,0.5000103528242504,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636016,,,train,sda-all,samples/GSE326639/GSM9636016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.53, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636017,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,29451,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",GSE326639,GSE326639+GSE326753,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13458,counts,um,1.0,verified,0.500002760905577,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636017,,,train,sda-all,samples/GSE326639/GSM9636017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9636018,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,34506,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",GSE326639,GSE326639+GSE326753,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13458,counts,um,1.0,verified,0.5000011510128913,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636018,,,train,sda-all,samples/GSE326639/GSM9636018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.59, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9636019,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,23451,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",GSE326639,GSE326639+GSE326753,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13458,counts,um,1.0,verified,0.5000103382681332,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636019,,,train,sda-all,samples/GSE326639/GSM9636019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9636020,skin,perturbation,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38758,"Ubiquitin-like proteins NEDD8 and SUMO2 control epithelial homeostasis, regeneration, and inflammation [Xenium]",GSE326639,GSE326639+GSE326753,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,Skin,,luna,,Tamoxifen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13458,counts,um,1.0,verified,0.5000007391201514,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42348677,,GSM9636020,,,train,sda-all,samples/GSE326639/GSM9636020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM9636817,skin,disease,cutaneous neuroendocrine carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,51539,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],GSE326660,GSE326660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Tumor,MONDO:0019210,luna,,,luna,not stated,,not stated,,GSE326660:2,2,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000025815778604,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636817,,,test,sda-all,samples/GSE326660/GSM9636817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9636818,skin,disease,cutaneous neuroendocrine carcinoma,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,213088,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],GSE326660,GSE326660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Tumor,MONDO:0019210,luna,,,luna,not stated,,not stated,,GSE326660:2,2,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999862372694742,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636818,,,test,sda-all,samples/GSE326660/GSM9636818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.48, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9636819,lymph node,disease,cutaneous neuroendocrine carcinoma,pelvic lymph node,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,106368,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],GSE326660,GSE326660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015876,Tumor,MONDO:0019210,luna,,,luna,not stated,,not stated,,GSE326660:6,6,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000097456388266,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636819,,,test,sda-all,samples/GSE326660/GSM9636819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9636820,lymph node,disease,cutaneous neuroendocrine carcinoma,pelvic lymph node,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,59563,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],GSE326660,GSE326660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015876,Tumor,MONDO:0019210,luna,,,luna,not stated,,not stated,,GSE326660:6,6,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999812030075186,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636820,,,test,sda-all,samples/GSE326660/GSM9636820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9636821,lymph node,disease,cutaneous neuroendocrine carcinoma,pelvic lymph node,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,216922,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],GSE326660,GSE326660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015876,Tumor,MONDO:0019210,luna,,,luna,not stated,,not stated,,GSE326660:6,6,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000060043668123,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636821,,,test,sda-all,samples/GSE326660/GSM9636821,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9636822,lymph node,disease,cutaneous neuroendocrine carcinoma,pelvic lymph node,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,35429,Reprogramming engineered autologous T cells to overcome resistance in patients with Merkel cell carcinoma [Xenium],GSE326660,GSE326660,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0015876,Tumor,MONDO:0019210,luna,,,luna,not stated,,not stated,,GSE326660:6,6,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000188951490999,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42715345,,GSM9636822,,,test,sda-all,samples/GSE326660/GSM9636822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9638040,spleen,normal,,spleen,primary tissue,Homo sapiens,human,juvenile,female,Xenium,Xenium,True,fluorescence: DAPI,249420,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",GSE326743,GSE326743,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,,luna,,,age rule: bare number read as years,juvenile,17,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9749,counts,um,1.0,verified,0.5000128945739633,VERIFIED,VERIFIED,FAILED,,,VERIFIED,PASS,,,,,GSM9638040,,,train,sda-all,samples/GSE326743/GSM9638040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9638041,spleen,normal,,spleen,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,329371,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",GSE326743,GSE326743,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,,luna,,,age rule: bare number read as years,adult,37,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9749,counts,um,1.0,verified,0.5000140977443609,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9638041,,,train,sda-all,samples/GSE326743/GSM9638041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9638042,spleen,normal,,spleen,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,220435,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",GSE326743,GSE326743,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,,luna,,,age rule: bare number read as years,adult,32,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9749,counts,um,1.0,verified,0.49998085532516495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9638042,,,train,sda-all,samples/GSE326743/GSM9638042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9638043,spleen,normal,,spleen,primary tissue,Homo sapiens,human,adult,female,Xenium,Xenium,True,fluorescence: DAPI,396173,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",GSE326743,GSE326743,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,,luna,,,age rule: bare number read as years,adult,32,extracted field,F,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9749,counts,um,1.0,verified,0.499979353773098,VERIFIED,VERIFIED,FAILED,,,VERIFIED,PASS,,,,,GSM9638043,,,train,sda-all,samples/GSE326743/GSM9638043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9638044,spleen,normal,,spleen,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,366199,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",GSE326743,GSE326743,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,,luna,,,age rule: bare number read as years,adult,57,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9749,counts,um,1.0,verified,0.5000072314049586,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9638044,,,train,sda-all,samples/GSE326743/GSM9638044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9638045,spleen,normal,,spleen,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,331582,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",GSE326743,GSE326743,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,,luna,,,age rule: bare number read as years,adult,31,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9749,counts,um,1.0,verified,0.49999689980158724,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9638045,,,train,sda-all,samples/GSE326743/GSM9638045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9638046,spleen,normal,,spleen,primary tissue,Homo sapiens,human,adult,male,Xenium,Xenium,True,fluorescence: DAPI,314413,"Identity, ontogeny, and age-related changes in splenic white pulp macrophages in mouse and human spleen [human_spleen_Xenium]",GSE326743,GSE326743,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,,luna,,,age rule: bare number read as years,adult,59,extracted field,M,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9749,counts,um,1.0,verified,0.5000068832599119,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9638046,,,train,sda-all,samples/GSE326743/GSM9638046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9641121,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,49050,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,GSE326837,GSE326837,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,10029,counts,um,1.0,verified,0.49998817407757806,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641121,,,train,sda-all,samples/GSE326837/GSM9641121,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.91}",,
GSM9641122,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19922,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,GSE326837,GSE326837,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,10029,counts,um,1.0,verified,0.500010350742296,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641122,,,train,sda-all,samples/GSE326837/GSM9641122,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9641123,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,juvenile,unknown,Xenium,Xenium,True,fluorescence: DAPI,39123,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,GSE326837,GSE326837,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,juvenile,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,10029,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641123,,,train,sda-all,samples/GSE326837/GSM9641123,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 0.81}",,
GSM9641124,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,128632,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,GSE326837,GSE326837,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,10029,counts,um,1.0,verified,0.4999965507726269,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641124,,,train,sda-all,samples/GSE326837/GSM9641124,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.62}",,
GSM9641125,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,131542,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,GSE326837,GSE326837,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,10029,counts,um,1.0,verified,0.5000051689508507,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641125,,,train,sda-all,samples/GSE326837/GSM9641125,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.63}",,
GSM9641126,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,juvenile,unknown,Xenium,Xenium,True,fluorescence: DAPI,78203,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,GSE326837,GSE326837,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,juvenile,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,10029,counts,um,1.0,verified,0.5000115684364344,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641126,,,train,sda-all,samples/GSE326837/GSM9641126,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.63}",,
GSM9641127,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,60074,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,GSE326837,GSE326837,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,10029,counts,um,1.0,verified,0.499987938520918,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641127,,,train,sda-all,samples/GSE326837/GSM9641127,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.77}",,
GSM9641128,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,43015,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,GSE326837,GSE326837,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,10029,counts,um,1.0,verified,0.5000010904174117,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641128,,,train,sda-all,samples/GSE326837/GSM9641128,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.63}",,
GSM9641129,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,juvenile,unknown,Xenium,Xenium,True,fluorescence: DAPI,63041,Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis,GSE326837,GSE326837,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,juvenile,,not stated,,,,FFPE,FFPE,release v3,imaging-based,xenium,,,cell,10029,counts,um,1.0,verified,0.5000103495860165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41269758,,GSM9641129,,,train,sda-all,samples/GSE326837/GSM9641129,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9643336,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1859,Polarized neocortical organoids with areal signatures upon the formation of anterior and posterior organizers. [Spatial Transcriptomics],GSE326903,GSE326903,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,neocortical organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.738626537005447,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42624107,,GSM9643336,,,test,sda-all,samples/GSE326903/GSM9643336,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9643337,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1953,Polarized neocortical organoids with areal signatures upon the formation of anterior and posterior organizers. [Spatial Transcriptomics],GSE326903,GSE326903,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,neocortical organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.671369039408379,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42624107,,GSM9643337,,,test,sda-all,samples/GSE326903/GSM9643337,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9643338,brain,normal,,brain,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3888,Polarized neocortical organoids with areal signatures upon the formation of anterior and posterior organizers. [Spatial Transcriptomics],GSE326903,GSE326903,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,neocortical organoid,,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.747508117245197,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42624107,,GSM9643338,,,test,sda-all,samples/GSE326903/GSM9643338,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9643339,heart,disease,myocarditis,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,83745,Cardiac tertiary immune niches drive immune activation in immune checkpoint inhibitor myocarditis [CosMx],GSE326904,GSE326904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,MONDO:0004496,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1194,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42647623,,GSM9643339,,,train,sda-all,samples/GSE326904/GSM9643339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9643340,heart,disease,myocarditis,heart,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,339640,Cardiac tertiary immune niches drive immune activation in immune checkpoint inhibitor myocarditis [CosMx],GSE326904,GSE326904,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000948,Heart,MONDO:0004496,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1144,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42647623,,GSM9643340,,,train,sda-all,samples/GSE326904/GSM9643340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9647219,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4885,Spatial transcriptomic profiling of human pancreatic ductal adenocarcinoma  using 10x Genomics Visium platform,GSE327056,GSE327056,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,adjacent tumor tissue,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.0476875369143155,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42100437,,GSM9647219,,,test,sda-all,samples/GSE327056/GSM9647219,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9647220,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,3983,Spatial transcriptomic profiling of human pancreatic ductal adenocarcinoma  using 10x Genomics Visium platform,GSE327056,GSE327056,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,pancreatic cancer tussue,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.04712376249616,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42100437,,GSM9647220,,,test,sda-all,samples/GSE327056/GSM9647220,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9647221,pancreas,disease,pancreatic ductal adenocarcinoma,stroma,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4483,Spatial transcriptomic profiling of human pancreatic ductal adenocarcinoma  using 10x Genomics Visium platform,GSE327056,GSE327056,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003891,tumor stroma,MONDO:0005184,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.046616875407982,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42100437,,GSM9647221,,,test,sda-all,samples/GSE327056/GSM9647221,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9647222,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4724,Spatial transcriptomic profiling of human pancreatic ductal adenocarcinoma  using 10x Genomics Visium platform,GSE327056,GSE327056,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,normal pancreatic tissue,,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.385825585967708,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42100437,,GSM9647222,,,test,sda-all,samples/GSE327056/GSM9647222,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9648224,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3715,C1q and immunoglobulins mediate activity-dependent synapse loss in the adult brain.,GSE327095,GSE327095,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,Coronal sections including dorsal hippocampi,,luna,,WT: C57BL/6J control,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42424464,,GSM9648224,,,train,sda-all,samples/GSE327095/GSM9648224,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.98, ""life_stage"": 0.9400000000000001}",,
GSM9648225,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,3549,C1q and immunoglobulins mediate activity-dependent synapse loss in the adult brain.,GSE327095,GSE327095,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,Coronal sections including dorsal hippocampi,,luna,,WT: CRISPR-Cas9 edited isogenic control,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42424464,,GSM9648225,,,train,sda-all,samples/GSE327095/GSM9648225,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9648894,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,grayscale bright-field (heuristic),24578,Subcellular mRNA localization patterns across tissues resolved with spatial transcriptomics,GSE327129,GSE327129,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,VisiumHD,,,cell,14703,counts,um,1.0,verified,1.407397386724781,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42009650,,GSM9648894,,,train,sda-all,samples/GSE327129/GSM9648894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9648895,liver,normal,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,grayscale bright-field (heuristic),33785,Subcellular mRNA localization patterns across tissues resolved with spatial transcriptomics,GSE327129,GSE327129,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,liver,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,VisiumHD,,,cell,14798,counts,um,1.0,verified,1.5001001399039453,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42009650,,GSM9648895,,,train,sda-all,samples/GSE327129/GSM9648895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9649271,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,168945,MERFISH data on seven mouse brain with Abeta pathology,GSE327147,GSE327147,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,5xFAD;hTREM2 amyloidosis mouse,MONDO:0019065;MONDO:0004975,luna,,VG-3909,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,imaging-based,MERSCOPE,,,cell,565,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649271,,,val,sda-all,samples/GSE327147/GSM9649271,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9649272,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,172097,MERFISH data on seven mouse brain with Abeta pathology,GSE327147,GSE327147,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,5xFAD;hTREM2 amyloidosis mouse,MONDO:0019065;MONDO:0004975,luna,,VG-3909,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,imaging-based,MERSCOPE,,,cell,565,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649272,,,val,sda-all,samples/GSE327147/GSM9649272,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9649273,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,158715,MERFISH data on seven mouse brain with Abeta pathology,GSE327147,GSE327147,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,5xFAD;hTREM2 amyloidosis mouse,MONDO:0019065;MONDO:0004975,luna,,VG-3909,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,imaging-based,MERSCOPE,,,cell,565,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649273,,,val,sda-all,samples/GSE327147/GSM9649273,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9649274,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,164735,MERFISH data on seven mouse brain with Abeta pathology,GSE327147,GSE327147,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,5xFAD;hTREM2 amyloidosis mouse,MONDO:0019065;MONDO:0004975,luna,,VG-3909,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,imaging-based,MERSCOPE,,,cell,565,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649274,,,val,sda-all,samples/GSE327147/GSM9649274,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9649275,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,142036,MERFISH data on seven mouse brain with Abeta pathology,GSE327147,GSE327147,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,5xFAD;hTREM2 amyloidosis mouse,MONDO:0019065;MONDO:0004975,luna,,Vehicle,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,imaging-based,MERSCOPE,,,cell,565,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649275,,,val,sda-all,samples/GSE327147/GSM9649275,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9649276,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,165959,MERFISH data on seven mouse brain with Abeta pathology,GSE327147,GSE327147,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,5xFAD;hTREM2 amyloidosis mouse,MONDO:0019065;MONDO:0004975,luna,,Vehicle,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,imaging-based,MERSCOPE,,,cell,565,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649276,,,val,sda-all,samples/GSE327147/GSM9649276,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9649277,brain,disease,amyloidosis;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,164350,MERFISH data on seven mouse brain with Abeta pathology,GSE327147,GSE327147,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,5xFAD;hTREM2 amyloidosis mouse,MONDO:0019065;MONDO:0004975,luna,,Vehicle,age rule: age with unit,adult,7 months,extracted field,male,,,,,release v3,imaging-based,MERSCOPE,,,cell,565,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9649277,,,val,sda-all,samples/GSE327147/GSM9649277,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9651110,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,175048,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Human liver cancer (HCC),MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651110,,,train,sda-all,samples/GSE327192/GSM9651110,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9651111,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,347335,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Human liver cancer (HCC),MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651111,,,train,sda-all,samples/GSE327192/GSM9651111,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9651112,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,758682,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Human liver cancer (HCC),MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651112,,,train,sda-all,samples/GSE327192/GSM9651112,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9651113,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,720421,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Human liver cancer (HCC),MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651113,,,train,sda-all,samples/GSE327192/GSM9651113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9651114,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,595633,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Human liver cancer (HCC),MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651114,,,train,sda-all,samples/GSE327192/GSM9651114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9651115,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,569276,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Human liver cancer (HCC),MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651115,,,train,sda-all,samples/GSE327192/GSM9651115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9651116,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,714523,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Human liver cancer (HCC),MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651116,,,train,sda-all,samples/GSE327192/GSM9651116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9651117,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,598747,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002107,Human liver cancer (HCC),MONDO:0007256,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,,,GSM9651117,,,train,sda-all,samples/GSE327192/GSM9651117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9651118,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,591143,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Human lung cancer (NSCLC),MONDO:0005233,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651118,,,train,sda-all,samples/GSE327192/GSM9651118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9651119,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,738182,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Human lung cancer (NSCLC),MONDO:0005233,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651119,,,train,sda-all,samples/GSE327192/GSM9651119,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9651120,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,647575,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Human lung cancer (NSCLC),MONDO:0005233,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651120,,,train,sda-all,samples/GSE327192/GSM9651120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9651121,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,280917,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Human lung cancer (NSCLC),MONDO:0005233,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651121,,,train,sda-all,samples/GSE327192/GSM9651121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9651122,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,274731,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Human lung cancer (NSCLC),MONDO:0005233,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651122,,,train,sda-all,samples/GSE327192/GSM9651122,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9651123,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,681194,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Human lung cancer (NSCLC),MONDO:0005233,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651123,,,train,sda-all,samples/GSE327192/GSM9651123,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9651124,lung,disease,non-small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,453859,Dendritic cell-mediated antigen presentation regulates tertiary lymphoid structure development in cancer [MERFISH],GSE327192,GSE327192,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Human lung cancer (NSCLC),MONDO:0005233,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9651124,,,train,sda-all,samples/GSE327192/GSM9651124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9652794,brain,disease,traumatic brain injury;vascular disorder,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium HD,Visium HD,True,H&E-like (heuristic),121967,"Heterogenous microglial reactivity contrasts with stable vascular transcriptional programs in mouse models of Alzheimer’s, CADASIL, and Traumatic Brain Injury (Spatial data)",GSE327284,GSE327284,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0858950;MONDO:0005385,mondo_predicate (Luna: perturbation),,C57Bl6,age rule: age with unit,adult,3 months,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19070,counts,um,1.0,verified,2.3827430642964735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42463666,,GSM9652794,,,train,sda-all,samples/GSE327284/GSM9652794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9652795,brain,disease,traumatic brain injury,brain,primary tissue,Mus musculus,house mouse,adult,male,Visium HD,Visium HD,True,H&E-like (heuristic),105589,"Heterogenous microglial reactivity contrasts with stable vascular transcriptional programs in mouse models of Alzheimer’s, CADASIL, and Traumatic Brain Injury (Spatial data)",GSE327284,GSE327284,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0858950,luna,,C57Bl6,age rule: age with unit,adult,3 months,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19070,counts,um,1.0,verified,2.2431857389186005,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42463666,,GSM9652795,,,train,sda-all,samples/GSE327284/GSM9652795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9654047,lung,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,50519,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,GSE327347,GSE327347,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,Biphasic pleural mesothelioma,not applicable,luna,not stated,,not stated,,GSE327347:27278,27278,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000206076307112,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654047,,,test,sda-all,samples/GSE327347/GSM9654047,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.14, ""life_stage"": 1.0}",organ;uberon,low_confidence_annotation
GSM9654048,other,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,298395,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,GSE327347,GSE327347,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,Epithelioid pleural mesothelioma,not applicable,luna,not stated,,not stated,,GSE327347:29891,29891,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500010329968715,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654048,,,test,sda-all,samples/GSE327347/GSM9654048,sda-tissue-disease-2.3,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9654049,other,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,102892,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,GSE327347,GSE327347,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,Sarcomatoid pleural mesothelioma,not applicable,luna,not stated,,not stated,,GSE327347:27306,27306,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000044164409375,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654049,,,test,sda-all,samples/GSE327347/GSM9654049,sda-tissue-disease-2.3,"{""organ"": 0.56, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9654050,lung,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,6947,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,GSE327347,GSE327347,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,Sarcomatoid pleural mesothelioma,not applicable,luna,not stated,,not stated,,GSE327347:27306,27306,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000185154707044,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,41319863;42138664,,GSM9654050,,,test,sda-all,samples/GSE327347/GSM9654050,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9654051,other,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,48293,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,GSE327347,GSE327347,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,Biphasic pleural mesothelioma,not applicable,luna,not stated,,not stated,,GSE327347:27278,27278,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999264532831256,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654051,,,test,sda-all,samples/GSE327347/GSM9654051,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9654052,other,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,65607,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,GSE327347,GSE327347,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,Epithelioid pleural mesothelioma,not applicable,luna,not stated,,not stated,,GSE327347:26599,26599,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654052,,,test,sda-all,samples/GSE327347/GSM9654052,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9654053,other,disease,pleural mesothelioma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,57823,Targeted spatial transcriptomic profiling of pleural mesothelioma using 10x Genomics Xenium,GSE327347,GSE327347,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,pleural mesothelioma,MONDO:0003308,luna,Biphasic pleural mesothelioma,not applicable,luna,not stated,,not stated,,GSE327347:27278,27278,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000014711074496,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41319863;42138664,,GSM9654053,,,test,sda-all,samples/GSE327347/GSM9654053,sda-tissue-disease-2.3,"{""organ"": 0.53, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9656414,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Curio Trekker,False,,6113,"Spatially resolved, integrated single-cell multiomic profiling of the transcriptome and epigenomic targets in frozen tissue sections",GSE327406,GSE327406,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,cell,32285,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42371963,,GSM9656414,,,train,sda-all,samples/GSE327406/GSM9656414,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9656850,brain,normal,,locus ceruleus,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,blue bright-field stain (heuristic),3121,Cellular Signatures of Melanocortin Pathway Genes Across the Locus Coeruleus [Spatial Transcriptomics],GSE327441,GSE327441,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002148,locus coeruleus,,luna,neurotypical,,age rule: bare number read as years,aged,76,extracted field,female,GSE327441:Donor_2,Donor_2,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18061,counts,um,1.0,verified,3.803520062425479,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41935248,,GSM9656850,,,train,sda-all,samples/GSE327441/GSM9656850,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9656851,brain,normal,,locus ceruleus,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,blue bright-field stain (heuristic),2880,Cellular Signatures of Melanocortin Pathway Genes Across the Locus Coeruleus [Spatial Transcriptomics],GSE327441,GSE327441,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002148,locus coeruleus,,luna,neurotypical,,age rule: bare number read as years,aged,76,extracted field,female,GSE327441:Donor_2,Donor_2,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18061,counts,um,1.0,verified,3.988825879513817,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41935248,,GSM9656851,,,train,sda-all,samples/GSE327441/GSM9656851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9656852,brain,normal,,locus ceruleus,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,blue bright-field stain (heuristic),3505,Cellular Signatures of Melanocortin Pathway Genes Across the Locus Coeruleus [Spatial Transcriptomics],GSE327441,GSE327441,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002148,locus coeruleus,,luna,neurotypical,,age rule: bare number read as years,aged,76,extracted field,female,GSE327441:Donor_2,Donor_2,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18061,counts,um,1.0,verified,4.611655651530046,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41935248,,GSM9656852,,,train,sda-all,samples/GSE327441/GSM9656852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9656853,brain,normal,,locus ceruleus,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,other bright-field stain (heuristic),3239,Cellular Signatures of Melanocortin Pathway Genes Across the Locus Coeruleus [Spatial Transcriptomics],GSE327441,GSE327441,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002148,locus coeruleus,,luna,neurotypical,,age rule: bare number read as years,aged,76,extracted field,female,GSE327441:Donor_2,Donor_2,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18061,counts,um,1.0,verified,4.60818098756864,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,41935248,,GSM9656853,,,train,sda-all,samples/GSE327441/GSM9656853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9661871,brain,disease,cerebrovascular disorder;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,204834,Single-cell spatial transcriptomic profiling of 3xTg-AD mouse brains following fecal microbiota transplantation from stroke and healthy human donors,GSE327581,GSE327581,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0011057;MONDO:0004975,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9661871,,,train,sda-all,samples/GSE327581/GSM9661871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9661872,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,164811,Single-cell spatial transcriptomic profiling of 3xTg-AD mouse brains following fecal microbiota transplantation from stroke and healthy human donors,GSE327581,GSE327581,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9661872,,,train,sda-all,samples/GSE327581/GSM9661872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9661873,brain,disease,stroke disorder;Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,111422,Single-cell spatial transcriptomic profiling of 3xTg-AD mouse brains following fecal microbiota transplantation from stroke and healthy human donors,GSE327581,GSE327581,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0005098;MONDO:0004975,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9661873,,,train,sda-all,samples/GSE327581/GSM9661873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9661874,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,126432,Single-cell spatial transcriptomic profiling of 3xTg-AD mouse brains following fecal microbiota transplantation from stroke and healthy human donors,GSE327581,GSE327581,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9661874,,,train,sda-all,samples/GSE327581/GSM9661874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9661875,brain,disease,Alzheimer disease,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,131223,Single-cell spatial transcriptomic profiling of 3xTg-AD mouse brains following fecal microbiota transplantation from stroke and healthy human donors,GSE327581,GSE327581,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,MONDO:0004975,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1207,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9661875,,,train,sda-all,samples/GSE327581/GSM9661875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9663831,plant,perturbation,,,primary tissue,Arabidopsis thaliana,thale cress,juvenile,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,15798,Transient cell states encode positional information to direct asymmetric growth [MERFISH],GSE327709,GSE327709,3702,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,luna,,,,luna,,Col,luna,juvenile,3-day-old etiolated,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,869,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663831,,,train,sda-all,samples/GSE327709/GSM9663831,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.71, ""uberon"": NaN, ""life_stage"": 0.28}",life_stage,low_confidence_annotation
GSM9663832,plant,perturbation,,,primary tissue,Arabidopsis thaliana,thale cress,juvenile,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,2269,Transient cell states encode positional information to direct asymmetric growth [MERFISH],GSE327709,GSE327709,3702,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,luna,,,,luna,,Col,luna,juvenile,3-day-old etiolated,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,639,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663832,,,train,sda-all,samples/GSE327709/GSM9663832,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.81, ""uberon"": NaN, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM9663833,plant,perturbation,,,primary tissue,Arabidopsis thaliana,thale cress,juvenile,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,4022,Transient cell states encode positional information to direct asymmetric growth [MERFISH],GSE327709,GSE327709,3702,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,luna,,,,luna,,Col,luna,juvenile,3-day-old etiolated,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,741,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663833,,,train,sda-all,samples/GSE327709/GSM9663833,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.43, ""uberon"": NaN, ""life_stage"": 0.32}",disease_status;life_stage,low_confidence_annotation
GSM9663834,plant,perturbation,,,primary tissue,Arabidopsis thaliana,thale cress,juvenile,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,6809,Transient cell states encode positional information to direct asymmetric growth [MERFISH],GSE327709,GSE327709,3702,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,luna,,,,luna,,Col,luna,juvenile,3-day-old etiolated,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,787,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663834,,,train,sda-all,samples/GSE327709/GSM9663834,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.81, ""uberon"": NaN, ""life_stage"": 0.39}",life_stage,low_confidence_annotation
GSM9663835,plant,perturbation,,,primary tissue,Arabidopsis thaliana,thale cress,juvenile,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,10039,Transient cell states encode positional information to direct asymmetric growth [MERFISH],GSE327709,GSE327709,3702,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,luna,,,,luna,,Col,luna,juvenile,3-day-old etiolated,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,787,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663835,,,train,sda-all,samples/GSE327709/GSM9663835,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.85, ""disease_status"": 0.6900000000000001, ""uberon"": NaN, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9663836,plant,perturbation,,,primary tissue,Arabidopsis thaliana,thale cress,juvenile,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,2213,Transient cell states encode positional information to direct asymmetric growth [MERFISH],GSE327709,GSE327709,3702,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,luna,,,,luna,,hls1,luna,juvenile,3-day-old etiolated,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,820,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663836,,,train,sda-all,samples/GSE327709/GSM9663836,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.75, ""disease_status"": 0.8, ""uberon"": NaN, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9663837,plant,perturbation,,,primary tissue,Arabidopsis thaliana,thale cress,juvenile,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,5093,Transient cell states encode positional information to direct asymmetric growth [MERFISH],GSE327709,GSE327709,3702,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,luna,,,,luna,,hls1,luna,juvenile,3-day-old etiolated,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,952,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663837,,,train,sda-all,samples/GSE327709/GSM9663837,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.63, ""uberon"": NaN, ""life_stage"": 0.37}",life_stage,low_confidence_annotation
GSM9663838,plant,perturbation,,,primary tissue,Arabidopsis thaliana,thale cress,juvenile,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,5889,Transient cell states encode positional information to direct asymmetric growth [MERFISH],GSE327709,GSE327709,3702,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,luna,,,,luna,,hls1,luna,juvenile,3-day-old etiolated,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,957,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663838,,,train,sda-all,samples/GSE327709/GSM9663838,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.55, ""uberon"": NaN, ""life_stage"": 0.34}",disease_status;life_stage,low_confidence_annotation
GSM9663839,plant,perturbation,,,primary tissue,Arabidopsis thaliana,thale cress,juvenile,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,3833,Transient cell states encode positional information to direct asymmetric growth [MERFISH],GSE327709,GSE327709,3702,Arabidopsis thaliana,3702,,False,False,GEO organism field,Arabidopsis thaliana,,luna,,,,luna,,hls1,luna,juvenile,3-day-old etiolated,not stated,,,,,,release v3,imaging-based,MERSCOPE,,,cell,891,counts,um,1.0,verified,,,,,,near_duplicate_observations,VERIFIED,,,,42239415,,GSM9663839,,,train,sda-all,samples/GSE327709/GSM9663839,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.59, ""uberon"": NaN, ""life_stage"": 0.34}",disease_status;life_stage,low_confidence_annotation
GSM9666080,brain,normal,,brain,primary tissue,Ciona robusta,,adult,unknown,Visium,Visium,True,other bright-field stain (heuristic),414,Spatial transcriptomic landscape of the Ciona adult brain: functional zonalisation and cellular composition in a sessile chordate brain and a novel insight into neural gland function,GSE327796,GSE327796,1774208,Ciona robusta,1774208,,False,False,GEO organism field,Ciona robusta,,luna,UBERON:0000955,adult neural complex,,luna,,wild type,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,15288,counts,um,1.0,verified,4.275764770585937,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42698976,,GSM9666080,,,train,sda-all,samples/GSE327796/GSM9666080,sda-tissue-disease-2.4,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 0.77}",,
GSM9666081,brain,normal,,brain,primary tissue,Ciona robusta,,adult,unknown,Visium,Visium,True,other bright-field stain (heuristic),532,Spatial transcriptomic landscape of the Ciona adult brain: functional zonalisation and cellular composition in a sessile chordate brain and a novel insight into neural gland function,GSE327796,GSE327796,1774208,Ciona robusta,1774208,,False,False,GEO organism field,Ciona robusta,,luna,UBERON:0000955,adult neural complex,,luna,,wild type,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,15288,counts,um,1.0,verified,4.34498940193164,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42698976,,GSM9666081,,,train,sda-all,samples/GSE327796/GSM9666081,sda-tissue-disease-2.4,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM9666082,brain,normal,,brain,primary tissue,Ciona robusta,,adult,unknown,Visium,Visium,True,other bright-field stain (heuristic),502,Spatial transcriptomic landscape of the Ciona adult brain: functional zonalisation and cellular composition in a sessile chordate brain and a novel insight into neural gland function,GSE327796,GSE327796,1774208,Ciona robusta,1774208,,False,False,GEO organism field,Ciona robusta,,luna,UBERON:0000955,adult neural complex,,luna,,wild type,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,15288,counts,um,1.0,verified,4.275802789206388,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42698976,,GSM9666082,,,train,sda-all,samples/GSE327796/GSM9666082,sda-tissue-disease-2.4,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9666083,brain,normal,,brain,primary tissue,Ciona robusta,,adult,unknown,Visium,Visium,True,other bright-field stain (heuristic),507,Spatial transcriptomic landscape of the Ciona adult brain: functional zonalisation and cellular composition in a sessile chordate brain and a novel insight into neural gland function,GSE327796,GSE327796,1774208,Ciona robusta,1774208,,False,False,GEO organism field,Ciona robusta,,luna,UBERON:0000955,adult neural complex,,luna,,wild type,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,15288,counts,um,1.0,verified,4.275203533226089,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42698976,,GSM9666083,,,train,sda-all,samples/GSE327796/GSM9666083,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.86, ""life_stage"": 0.8200000000000001}",,
GSM9667707,lung,normal,,lung,primary tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,33925,Single-cell spatial transcriptomic analyses of severe Covid-19 lungs identifies  disease-associated spatial niches,GSE327879,GSE327879,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,,,luna,Control (Cardiac   death),,luna,adult,Mix of 2 patients of 39 and one  patient of 63 years old,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,index_column_as_feature,VERIFIED,,,,,,GSM9667707,,,train,sda-all,samples/GSE327879/GSM9667707,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9667708,lung,disease,COVID-19,lung,primary tissue,Homo sapiens,human,adult,unknown,CosMx,CosMx,False,,43048,Single-cell spatial transcriptomic analyses of severe Covid-19 lungs identifies  disease-associated spatial niches,GSE327879,GSE327879,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,,MONDO:0100096,luna,COVID-19 (Cause of   death),,luna,adult,"Composed of 3 patients respectively age 53,63 and 67",not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1010,counts,pixel,,unresolved,,ABSENT,VERIFIED,VERIFIED,,index_column_as_feature,VERIFIED,,,,,,GSM9667708,,,train,sda-all,samples/GSE327879/GSM9667708,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9668023,brain,normal,,brain,primary tissue,Branchiostoma floridae,Florida lancelet,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,51540,A 3D Amphioxus Brain Atlas Illuminates the Blueprint of the Ancestral Chordate Brain and Highlights Unique Vertebrate Innovations,GSE327901,GSE327901,7739,Branchiostoma floridae,7739,,False,False,GEO organism field,Branchiostoma floridae,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000008611780916,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42397914,,GSM9668023,,,train,sda-all,samples/GSE327901/GSM9668023,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9674371,unknown,not stated,,,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,False,,640573,CRISP enables comparisons of image-based spatial transcriptomic segmentation quality across ten organs,GSE328169,GSE328169,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,,multiple,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,13454,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9674371,,,test,sda-all,samples/GSE328169/GSM9674371,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.49, ""uberon"": NaN, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9682589,lymph node,disease,triple-negative breast carcinoma,axillary lymph node,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,114695,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,GSE328422,GSE328422,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001097,lymph node,MONDO:0005494,luna,,treatment-naïve; no neoadjuvant therapy before surgery,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000039740573535,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682589,,,train,sda-all,samples/GSE328422/GSM9682589,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.43, ""disease_status"": 0.5700000000000001, ""uberon"": 0.5, ""life_stage"": 1.0}",sample_kind;disease_status;uberon,low_confidence_annotation
GSM9682590,lymph node,disease,triple-negative breast carcinoma,lymph node,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,144744,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,GSE328422,GSE328422,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,lymph node,MONDO:0005494,luna,,treatment-naïve; no neoadjuvant therapy before surgery,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999811875769598,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682590,,,train,sda-all,samples/GSE328422/GSM9682590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9682591,lymph node,disease,triple-negative breast carcinoma,axillary lymph node,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,260137,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,GSE328422,GSE328422,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001097,lymph node,MONDO:0005494,luna,,treatment-naïve; no neoadjuvant therapy before surgery,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.499985380116959,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682591,,,train,sda-all,samples/GSE328422/GSM9682591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8, ""disease_status"": 0.9500000000000001, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9682592,lymph node,disease,triple-negative breast carcinoma,axillary lymph node,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,123339,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,GSE328422,GSE328422,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001097,lymph node,MONDO:0005494,luna,,treatment-naïve; no neoadjuvant therapy before surgery,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000120465340401,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682592,,,train,sda-all,samples/GSE328422/GSM9682592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.73, ""disease_status"": 0.88, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM9682593,lymph node,disease,triple-negative breast carcinoma,axillary lymph node,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,291682,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,GSE328422,GSE328422,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001097,lymph node,MONDO:0005494,luna,,treatment-naïve; no neoadjuvant therapy before surgery,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000039697662602,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682593,,,train,sda-all,samples/GSE328422/GSM9682593,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.74, ""disease_status"": 0.5700000000000001, ""uberon"": 0.84, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9682594,lymph node,disease,triple-negative breast carcinoma,axillary lymph node,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,258566,Spatio-temporal mapping of immune cell dynamics during human sequential lymph node metastasis,GSE328422,GSE328422,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001097,lymph node,MONDO:0005494,luna,,treatment-naïve; no neoadjuvant therapy before surgery,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000103213376453,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9682594,,,train,sda-all,samples/GSE328422/GSM9682594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.96, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9683419,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,male,Stereo-seq,Stereo-seq,False,,55251,Spatiotemporal transcriptomics characterizes immune microenvironment during mouse liver aging [Spatial Transcriptomics],GSE328448,GSE328448,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,WT,age rule: age with unit,aged,18months,extracted field,Male,,,,,release v3,sequencing-based,Stereo-seq,,,bin,31334,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42010880,,GSM9683419,,,train,sda-all,samples/GSE328448/GSM9683419,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9683420,liver,normal,,liver,primary tissue,Mus musculus,house mouse,aged,male,Stereo-seq,Stereo-seq,False,,45553,Spatiotemporal transcriptomics characterizes immune microenvironment during mouse liver aging [Spatial Transcriptomics],GSE328448,GSE328448,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,WT,age rule: age with unit,aged,18months,extracted field,Male,,,,,release v3,sequencing-based,Stereo-seq,,,bin,30165,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42010880,,GSM9683420,,,train,sda-all,samples/GSE328448/GSM9683420,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9683421,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,24670,Spatiotemporal transcriptomics characterizes immune microenvironment during mouse liver aging [Spatial Transcriptomics],GSE328448,GSE328448,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,WT,age rule: age with unit,adult,2months,extracted field,Male,,,,,release v3,sequencing-based,Stereo-seq,,,bin,25887,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42010880,,GSM9683421,,,train,sda-all,samples/GSE328448/GSM9683421,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9683422,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Stereo-seq,Stereo-seq,False,,30799,Spatiotemporal transcriptomics characterizes immune microenvironment during mouse liver aging [Spatial Transcriptomics],GSE328448,GSE328448,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002107,Liver,,luna,,WT,age rule: age with unit,juvenile,2months,extracted field,Male,,,,,release v3,sequencing-based,Stereo-seq,,,bin,24629,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,42010880,,GSM9683422,,,train,sda-all,samples/GSE328448/GSM9683422,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM9683939,unknown,disease,carcinoma;malignant spindle cell neoplasm,,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,118109,Single-cell resolution spatial transcriptomics of a mucinous tubular and spindle cell carcinoma using CosMX,GSE328460,GSE328460,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,mucinous tubular and spindle cell carcinoma,MONDO:0004993;MONDO:0020663,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMX,,,cell,980,counts,pixel,,unresolved,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9683939,,,train,sda-all,samples/GSE328460/GSM9683939,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9684206,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,187619,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,32351,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684206,,,train,sda-all,samples/GSE328481/GSM9684206,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684207,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,97923,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,33157,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684207,,,train,sda-all,samples/GSE328481/GSM9684207,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684208,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,47654,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,33189,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684208,,,train,sda-all,samples/GSE328481/GSM9684208,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684209,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,55741,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,33172,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684209,,,train,sda-all,samples/GSE328481/GSM9684209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684210,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,33057,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,33021,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684210,,,train,sda-all,samples/GSE328481/GSM9684210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684211,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,130469,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,33139,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684211,,,train,sda-all,samples/GSE328481/GSM9684211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684212,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,91660,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,33135,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684212,,,train,sda-all,samples/GSE328481/GSM9684212,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684213,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,138926,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,33228,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684213,,,train,sda-all,samples/GSE328481/GSM9684213,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684214,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,152381,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,33318,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684214,,,train,sda-all,samples/GSE328481/GSM9684214,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684215,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,93239,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,33281,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684215,,,train,sda-all,samples/GSE328481/GSM9684215,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9684216,lung,disease,lung adenocarcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Stereo-seq,Stereo-seq,False,,70071,Uncovering ectopic GC-like niches for tumor reactive lymphocyte priming in lung adenocarcinoma using Stereo-XCR-seq,GSE328481,GSE328481,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,lung,MONDO:0005061,luna,lung adenocarcinoma,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Stereo-seq,,,cell,33245,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,PASS,,,42547508,,GSM9684216,,,train,sda-all,samples/GSE328481/GSM9684216,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9687898,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,23729,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000257484207635,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687898,,,train,sda-all,samples/GSE328700/GSM9687898,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687899,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,23758,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000292056074767,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687899,,,train,sda-all,samples/GSE328700/GSM9687899,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687900,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24081,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49995886804870016,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687900,,,train,sda-all,samples/GSE328700/GSM9687900,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687901,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19578,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997768163713774,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687901,,,train,sda-all,samples/GSE328700/GSM9687901,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687902,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19509,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999897414854329,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687902,,,train,sda-all,samples/GSE328700/GSM9687902,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687903,spinal cord,normal,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,20474,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,Sham,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997324662495884,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687903,,,train,sda-all,samples/GSE328700/GSM9687903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687904,spinal cord,disease,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,32694,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,SNI,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.50000365532703,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687904,,,train,sda-all,samples/GSE328700/GSM9687904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687905,spinal cord,disease,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,28768,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,SNI,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000274763016898,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687905,,,train,sda-all,samples/GSE328700/GSM9687905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687906,spinal cord,disease,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,21978,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,SNI,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999690891605989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687906,,,train,sda-all,samples/GSE328700/GSM9687906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687907,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,30660,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,SNI,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999690891605989,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687907,,,train,sda-all,samples/GSE328700/GSM9687907,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687908,spinal cord,disease,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24626,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,SNI,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000274763016898,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687908,,,train,sda-all,samples/GSE328700/GSM9687908,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9687909,spinal cord,perturbation,,lumbar spinal cord,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24447,Spinal signatures of entrenched and treated neuropathic pain in male mice [Xenium],GSE328700,GSE328700,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002792,mouse lumbar spinal cord,,luna,,SNI,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998354180381827,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42457652,,GSM9687909,,,train,sda-all,samples/GSE328700/GSM9687909,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9694495,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,275665,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.4999912459413001,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694495,,,train,sda-all,samples/GSE328931/GSM9694495,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9694496,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,127188,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.49998534583821796,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694496,,,train,sda-all,samples/GSE328931/GSM9694496,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9694497,lung,disease,cryptococcosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,297497,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005724,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.5000019409937888,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694497,,,train,sda-all,samples/GSE328931/GSM9694497,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9694498,lung,disease,cryptococcosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,322844,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005724,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.5000071195567752,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694498,,,train,sda-all,samples/GSE328931/GSM9694498,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9694499,lung,disease,cryptococcosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,316319,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005724,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.5000069026450936,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694499,,,train,sda-all,samples/GSE328931/GSM9694499,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9694500,lung,disease,cryptococcosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,230482,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005724,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.5000041427308882,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694500,,,train,sda-all,samples/GSE328931/GSM9694500,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9694501,lung,disease,cryptococcosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,203314,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005724,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.49999793268833204,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694501,,,train,sda-all,samples/GSE328931/GSM9694501,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9694502,lung,disease,cryptococcosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,261309,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005724,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.4999985225459488,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694502,,,train,sda-all,samples/GSE328931/GSM9694502,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9694503,lung,disease,cryptococcosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,275333,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005724,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.5000095504902585,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694503,,,train,sda-all,samples/GSE328931/GSM9694503,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9694504,lung,disease,cryptococcosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,81449,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005724,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.5000029550827423,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694504,,,train,sda-all,samples/GSE328931/GSM9694504,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9694505,lung,disease,cryptococcosis,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,141598,Transcriptomic and lipidomic analysis of the cryptococcal lung granuloma reveals macrophage boundary programs and sphingolipid remodeling [Xenium],GSE328931,GSE328931,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005724,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13603,counts,um,1.0,verified,0.49998488608883795,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42209491,,GSM9694505,,,train,sda-all,samples/GSE328931/GSM9694505,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9697685,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,8371,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697685,,,val,sda-all,samples/GSE329112/GSM9697685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9697686,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,11756,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697686,,,val,sda-all,samples/GSE329112/GSM9697686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9697687,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,9913,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697687,,,val,sda-all,samples/GSE329112/GSM9697687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9697688,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,14291,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697688,,,val,sda-all,samples/GSE329112/GSM9697688,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.74}",,
GSM9697689,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,10109,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697689,,,val,sda-all,samples/GSE329112/GSM9697689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697690,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,11193,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697690,,,val,sda-all,samples/GSE329112/GSM9697690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697691,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,11608,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697691,,,val,sda-all,samples/GSE329112/GSM9697691,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697692,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,10570,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697692,,,val,sda-all,samples/GSE329112/GSM9697692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9697693,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,5779,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697693,,,val,sda-all,samples/GSE329112/GSM9697693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM9697694,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,15907,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697694,,,val,sda-all,samples/GSE329112/GSM9697694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM9697695,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,6605,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,25997,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697695,,,val,sda-all,samples/GSE329112/GSM9697695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.44}",life_stage,low_confidence_annotation
GSM9697696,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,2891,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697696,,,val,sda-all,samples/GSE329112/GSM9697696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM9697697,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,4448,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697697,,,val,sda-all,samples/GSE329112/GSM9697697,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.66}",,
GSM9697698,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,2647,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697698,,,val,sda-all,samples/GSE329112/GSM9697698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.85}",,
GSM9697699,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,11433,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697699,,,val,sda-all,samples/GSE329112/GSM9697699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9697700,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,13080,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697700,,,val,sda-all,samples/GSE329112/GSM9697700,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697701,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,10269,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697701,,,val,sda-all,samples/GSE329112/GSM9697701,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697702,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,8804,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697702,,,val,sda-all,samples/GSE329112/GSM9697702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.6000000000000001}",,
GSM9697703,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,8043,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697703,,,val,sda-all,samples/GSE329112/GSM9697703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697704,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,4420,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697704,,,val,sda-all,samples/GSE329112/GSM9697704,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697705,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,5235,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697705,,,val,sda-all,samples/GSE329112/GSM9697705,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM9697706,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,9454,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697706,,,val,sda-all,samples/GSE329112/GSM9697706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9697707,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,7871,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697707,,,val,sda-all,samples/GSE329112/GSM9697707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM9697708,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,10549,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697708,,,val,sda-all,samples/GSE329112/GSM9697708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM9697709,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,11028,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697709,,,val,sda-all,samples/GSE329112/GSM9697709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9697710,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,4848,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697710,,,val,sda-all,samples/GSE329112/GSM9697710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.86}",,
GSM9697711,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,12694,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697711,,,val,sda-all,samples/GSE329112/GSM9697711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM9697712,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,7327,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697712,,,val,sda-all,samples/GSE329112/GSM9697712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.34}",life_stage,low_confidence_annotation
GSM9697713,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,2719,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,25263,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697713,,,val,sda-all,samples/GSE329112/GSM9697713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9697714,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,4635,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,25263,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697714,,,val,sda-all,samples/GSE329112/GSM9697714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.91}",,
GSM9697715,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,4781,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,25660,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697715,,,val,sda-all,samples/GSE329112/GSM9697715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697716,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,7353,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,25997,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697716,,,val,sda-all,samples/GSE329112/GSM9697716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.63}",,
GSM9697717,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,7994,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,25997,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697717,,,val,sda-all,samples/GSE329112/GSM9697717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.48}",life_stage,low_confidence_annotation
GSM9697718,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,9917,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,25263,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697718,,,val,sda-all,samples/GSE329112/GSM9697718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM9697719,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,5208,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,25660,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697719,,,val,sda-all,samples/GSE329112/GSM9697719,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697720,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,5727,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,25660,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697720,,,val,sda-all,samples/GSE329112/GSM9697720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697721,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,8720,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697721,,,val,sda-all,samples/GSE329112/GSM9697721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697722,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,3831,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697722,,,val,sda-all,samples/GSE329112/GSM9697722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697723,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,6608,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697723,,,val,sda-all,samples/GSE329112/GSM9697723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9697724,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,5432,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697724,,,val,sda-all,samples/GSE329112/GSM9697724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9697725,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,6967,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697725,,,val,sda-all,samples/GSE329112/GSM9697725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697726,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,6198,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697726,,,val,sda-all,samples/GSE329112/GSM9697726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697727,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,3230,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697727,,,val,sda-all,samples/GSE329112/GSM9697727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697728,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,8899,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697728,,,val,sda-all,samples/GSE329112/GSM9697728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9697729,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,10567,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697729,,,val,sda-all,samples/GSE329112/GSM9697729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697730,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,3476,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697730,,,val,sda-all,samples/GSE329112/GSM9697730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.73}",,
GSM9697731,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,5304,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697731,,,val,sda-all,samples/GSE329112/GSM9697731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9697732,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,5819,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697732,,,val,sda-all,samples/GSE329112/GSM9697732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.64}",,
GSM9697733,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,6154,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697733,,,val,sda-all,samples/GSE329112/GSM9697733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM9697734,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,11298,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697734,,,val,sda-all,samples/GSE329112/GSM9697734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9697735,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,9790,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697735,,,val,sda-all,samples/GSE329112/GSM9697735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9697736,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,13372,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697736,,,val,sda-all,samples/GSE329112/GSM9697736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.51}",life_stage,low_confidence_annotation
GSM9697737,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,13120,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697737,,,val,sda-all,samples/GSE329112/GSM9697737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.53}",life_stage,low_confidence_annotation
GSM9697738,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,12734,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697738,,,val,sda-all,samples/GSE329112/GSM9697738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697739,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,13068,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697739,,,val,sda-all,samples/GSE329112/GSM9697739,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9697740,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,13900,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697740,,,val,sda-all,samples/GSE329112/GSM9697740,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697741,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,17029,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697741,,,val,sda-all,samples/GSE329112/GSM9697741,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9697742,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,17587,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697742,,,val,sda-all,samples/GSE329112/GSM9697742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.81}",,
GSM9697743,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,15583,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697743,,,val,sda-all,samples/GSE329112/GSM9697743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.8}",,
GSM9697744,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,10008,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697744,,,val,sda-all,samples/GSE329112/GSM9697744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697745,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,aged,unknown,Slide-seq,Slide-seq,False,,10553,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Old,luna,aged,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697745,,,val,sda-all,samples/GSE329112/GSM9697745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9697746,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,10148,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697746,,,val,sda-all,samples/GSE329112/GSM9697746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 0.63}",,
GSM9697747,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,12732,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697747,,,val,sda-all,samples/GSE329112/GSM9697747,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.29}",life_stage,low_confidence_annotation
GSM9697748,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,6789,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697748,,,val,sda-all,samples/GSE329112/GSM9697748,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.42}",life_stage,low_confidence_annotation
GSM9697749,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,10794,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697749,,,val,sda-all,samples/GSE329112/GSM9697749,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM9697750,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,11050,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697750,,,val,sda-all,samples/GSE329112/GSM9697750,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9697751,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,11730,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Middle,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697751,,,val,sda-all,samples/GSE329112/GSM9697751,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 0.7000000000000001}",,
GSM9697752,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,8847,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,30709,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697752,,,val,sda-all,samples/GSE329112/GSM9697752,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.41000000000000003}",life_stage,low_confidence_annotation
GSM9697753,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,adult,unknown,Slide-seq,Slide-seq,False,,8789,Aging disrupts spatiotemporal coordination in the cycling murine ovary,GSE329112,GSE329112,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000992,Ovary,,luna,,Young,luna,adult,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Slide-seq,,,bead,21802,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42310395,,GSM9697753,,,val,sda-all,samples/GSE329112/GSM9697753,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.5}",life_stage,low_confidence_annotation
GSM9699665,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,225376,Analysis of mouse livers fed with high cholesterol diet and alcohol by spatial transcriptomics,GSE329229,GSE329229,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,"high cholesterol diet, alcohol",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000074753887203,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9699665,,,train,sda-all,samples/GSE329229/GSM9699665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9703599,bone,disease,,bone tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,77166,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,GSE329415,GSE329415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002481,Bone,,luna,,B16F10 injection,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13639,counts,um,1.0,verified,0.4999951817180616,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703599,,,train,sda-all,samples/GSE329415/GSM9703599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.76, ""disease_status"": 0.92, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9703600,bone,disease,,bone tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,65456,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,GSE329415,GSE329415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002481,Bone,,luna,,B16F10 injection,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13639,counts,um,1.0,verified,0.4999876094498596,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703600,,,train,sda-all,samples/GSE329415/GSM9703600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.66, ""disease_status"": 0.93, ""uberon"": 0.43, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9703601,bone,disease,,bone tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,140716,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,GSE329415,GSE329415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002481,Bone,,luna,,B16F10 injection,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13639,counts,um,1.0,verified,0.49998967795210575,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703601,,,train,sda-all,samples/GSE329415/GSM9703601,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.79, ""disease_status"": 0.87, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9703602,bone,disease,,bone tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,119458,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,GSE329415,GSE329415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002481,Bone,,luna,,B16F10 injection,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13639,counts,um,1.0,verified,0.5000092319054653,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703602,,,train,sda-all,samples/GSE329415/GSM9703602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.7000000000000001, ""disease_status"": 0.9500000000000001, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9703603,bone,perturbation,,bone tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,182887,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,GSE329415,GSE329415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002481,Bone,,luna,,Prf1-/-,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13639,counts,um,1.0,verified,0.4999944490262005,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703603,,,train,sda-all,samples/GSE329415/GSM9703603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.66, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9703604,bone,perturbation,,bone tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,169216,Spatial transcriptomics of bone taken from two PRF1-/-  B16F10-injected  and one PRF1-/-  healthy control- bone tissues using Xenium,GSE329415,GSE329415,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002481,Bone,,luna,,Prf1-/-,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13639,counts,um,1.0,verified,0.4999969587854606,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9703604,,,train,sda-all,samples/GSE329415/GSM9703604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.45, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9709769,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9849,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709769,,,train,sda-all,samples/GSE329718/GSM9709769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709770,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,13610,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709770,,,train,sda-all,samples/GSE329718/GSM9709770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709771,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8177,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709771,,,train,sda-all,samples/GSE329718/GSM9709771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709772,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10229,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709772,,,train,sda-all,samples/GSE329718/GSM9709772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709773,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12897,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709773,,,train,sda-all,samples/GSE329718/GSM9709773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709774,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8610,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709774,,,train,sda-all,samples/GSE329718/GSM9709774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709775,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12991,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709775,,,train,sda-all,samples/GSE329718/GSM9709775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709776,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12673,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709776,,,train,sda-all,samples/GSE329718/GSM9709776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709777,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,13971,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709777,,,train,sda-all,samples/GSE329718/GSM9709777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709778,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9973,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709778,,,train,sda-all,samples/GSE329718/GSM9709778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709779,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,7572,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709779,,,train,sda-all,samples/GSE329718/GSM9709779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709780,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9572,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709780,,,train,sda-all,samples/GSE329718/GSM9709780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709781,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8876,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709781,,,train,sda-all,samples/GSE329718/GSM9709781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709782,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8579,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709782,,,train,sda-all,samples/GSE329718/GSM9709782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709783,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8958,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709783,,,train,sda-all,samples/GSE329718/GSM9709783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709784,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8922,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709784,,,train,sda-all,samples/GSE329718/GSM9709784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709785,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9143,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709785,,,train,sda-all,samples/GSE329718/GSM9709785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709786,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,17564,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709786,,,train,sda-all,samples/GSE329718/GSM9709786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709787,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,7973,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709787,,,train,sda-all,samples/GSE329718/GSM9709787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709788,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,7612,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709788,,,train,sda-all,samples/GSE329718/GSM9709788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709789,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,5283,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709789,,,train,sda-all,samples/GSE329718/GSM9709789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709790,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,6800,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709790,,,train,sda-all,samples/GSE329718/GSM9709790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709791,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8086,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709791,,,train,sda-all,samples/GSE329718/GSM9709791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709792,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,5099,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709792,,,train,sda-all,samples/GSE329718/GSM9709792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709793,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,20710,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709793,,,train,sda-all,samples/GSE329718/GSM9709793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709794,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,17664,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709794,,,train,sda-all,samples/GSE329718/GSM9709794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709795,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,15822,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709795,,,train,sda-all,samples/GSE329718/GSM9709795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709796,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,12924,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709796,,,train,sda-all,samples/GSE329718/GSM9709796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709797,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,16616,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709797,,,train,sda-all,samples/GSE329718/GSM9709797,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709798,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,11262,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709798,,,train,sda-all,samples/GSE329718/GSM9709798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709799,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,12281,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709799,,,train,sda-all,samples/GSE329718/GSM9709799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709800,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,female,MERFISH/MERSCOPE,MERFISH,False,,9371,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,female,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709800,,,train,sda-all,samples/GSE329718/GSM9709800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709801,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,15146,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709801,,,train,sda-all,samples/GSE329718/GSM9709801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709802,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,15426,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709802,,,train,sda-all,samples/GSE329718/GSM9709802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9709803,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10968,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709803,,,train,sda-all,samples/GSE329718/GSM9709803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9709804,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11898,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709804,,,train,sda-all,samples/GSE329718/GSM9709804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9709805,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10556,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709805,,,train,sda-all,samples/GSE329718/GSM9709805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9709806,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10005,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709806,,,train,sda-all,samples/GSE329718/GSM9709806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709807,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9513,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709807,,,train,sda-all,samples/GSE329718/GSM9709807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9709808,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9898,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709808,,,train,sda-all,samples/GSE329718/GSM9709808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9709809,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9875,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709809,,,train,sda-all,samples/GSE329718/GSM9709809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9709810,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10376,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709810,,,train,sda-all,samples/GSE329718/GSM9709810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709811,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8260,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709811,,,train,sda-all,samples/GSE329718/GSM9709811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9709812,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8375,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709812,,,train,sda-all,samples/GSE329718/GSM9709812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.81, ""life_stage"": 1.0}",,
GSM9709813,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10227,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709813,,,train,sda-all,samples/GSE329718/GSM9709813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.79, ""life_stage"": 1.0}",,
GSM9709814,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9965,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709814,,,train,sda-all,samples/GSE329718/GSM9709814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9709815,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,7706,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709815,,,train,sda-all,samples/GSE329718/GSM9709815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9709816,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9589,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709816,,,train,sda-all,samples/GSE329718/GSM9709816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9709817,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11271,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709817,,,train,sda-all,samples/GSE329718/GSM9709817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709818,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,13442,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709818,,,train,sda-all,samples/GSE329718/GSM9709818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9709819,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,20372,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709819,,,train,sda-all,samples/GSE329718/GSM9709819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9709820,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,13515,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709820,,,train,sda-all,samples/GSE329718/GSM9709820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709821,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10058,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709821,,,train,sda-all,samples/GSE329718/GSM9709821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9709822,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10218,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709822,,,train,sda-all,samples/GSE329718/GSM9709822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709823,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9244,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709823,,,train,sda-all,samples/GSE329718/GSM9709823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709824,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8841,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709824,,,train,sda-all,samples/GSE329718/GSM9709824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709825,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12330,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709825,,,train,sda-all,samples/GSE329718/GSM9709825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709826,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,14903,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709826,,,train,sda-all,samples/GSE329718/GSM9709826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709827,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11782,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709827,,,train,sda-all,samples/GSE329718/GSM9709827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709828,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10920,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709828,,,train,sda-all,samples/GSE329718/GSM9709828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709829,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11742,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709829,,,train,sda-all,samples/GSE329718/GSM9709829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709830,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12023,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709830,,,train,sda-all,samples/GSE329718/GSM9709830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709831,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8057,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709831,,,train,sda-all,samples/GSE329718/GSM9709831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709832,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9919,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709832,,,train,sda-all,samples/GSE329718/GSM9709832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709833,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12738,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709833,,,train,sda-all,samples/GSE329718/GSM9709833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709834,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11205,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709834,,,train,sda-all,samples/GSE329718/GSM9709834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709835,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,14894,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709835,,,train,sda-all,samples/GSE329718/GSM9709835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709836,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,16305,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709836,,,train,sda-all,samples/GSE329718/GSM9709836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709837,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11181,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709837,,,train,sda-all,samples/GSE329718/GSM9709837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709838,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10207,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709838,,,train,sda-all,samples/GSE329718/GSM9709838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709839,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9306,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709839,,,train,sda-all,samples/GSE329718/GSM9709839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709840,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11917,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709840,,,train,sda-all,samples/GSE329718/GSM9709840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709841,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,14769,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709841,,,train,sda-all,samples/GSE329718/GSM9709841,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709842,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,17403,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709842,,,train,sda-all,samples/GSE329718/GSM9709842,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709843,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,21142,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709843,,,train,sda-all,samples/GSE329718/GSM9709843,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709844,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,17599,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709844,,,train,sda-all,samples/GSE329718/GSM9709844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709845,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,15313,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709845,,,train,sda-all,samples/GSE329718/GSM9709845,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709846,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,16049,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709846,,,train,sda-all,samples/GSE329718/GSM9709846,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709847,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11855,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709847,,,train,sda-all,samples/GSE329718/GSM9709847,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709848,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8224,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709848,,,train,sda-all,samples/GSE329718/GSM9709848,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9709849,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,17277,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709849,,,train,sda-all,samples/GSE329718/GSM9709849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709850,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12176,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709850,,,train,sda-all,samples/GSE329718/GSM9709850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9709851,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,19823,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,UNRESOLVED,,zero_count_observations,VERIFIED,,,,,,GSM9709851,,,train,sda-all,samples/GSE329718/GSM9709851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709852,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,13332,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709852,,,train,sda-all,samples/GSE329718/GSM9709852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709853,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10648,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709853,,,train,sda-all,samples/GSE329718/GSM9709853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709854,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11728,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709854,,,train,sda-all,samples/GSE329718/GSM9709854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709855,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12184,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709855,,,train,sda-all,samples/GSE329718/GSM9709855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709856,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10067,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709856,,,train,sda-all,samples/GSE329718/GSM9709856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709857,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,13684,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709857,,,train,sda-all,samples/GSE329718/GSM9709857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709858,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12775,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709858,,,train,sda-all,samples/GSE329718/GSM9709858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709859,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10310,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709859,,,train,sda-all,samples/GSE329718/GSM9709859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709860,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11212,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709860,,,train,sda-all,samples/GSE329718/GSM9709860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709861,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12920,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709861,,,train,sda-all,samples/GSE329718/GSM9709861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709862,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11320,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709862,,,train,sda-all,samples/GSE329718/GSM9709862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9709863,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10667,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709863,,,train,sda-all,samples/GSE329718/GSM9709863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709864,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11534,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709864,,,train,sda-all,samples/GSE329718/GSM9709864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709865,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10815,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709865,,,train,sda-all,samples/GSE329718/GSM9709865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709866,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9694,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709866,,,train,sda-all,samples/GSE329718/GSM9709866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709867,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9764,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709867,,,train,sda-all,samples/GSE329718/GSM9709867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709868,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,7070,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709868,,,train,sda-all,samples/GSE329718/GSM9709868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709869,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,7205,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709869,,,train,sda-all,samples/GSE329718/GSM9709869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709870,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8021,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709870,,,train,sda-all,samples/GSE329718/GSM9709870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709871,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10195,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709871,,,train,sda-all,samples/GSE329718/GSM9709871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709872,brain,normal,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9703,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709872,,,train,sda-all,samples/GSE329718/GSM9709872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709873,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,13184,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709873,,,train,sda-all,samples/GSE329718/GSM9709873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709874,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,13307,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709874,,,train,sda-all,samples/GSE329718/GSM9709874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709875,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8645,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709875,,,train,sda-all,samples/GSE329718/GSM9709875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709876,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,11820,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709876,,,train,sda-all,samples/GSE329718/GSM9709876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709877,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10087,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709877,,,train,sda-all,samples/GSE329718/GSM9709877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.5700000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709878,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,13554,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709878,,,train,sda-all,samples/GSE329718/GSM9709878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709879,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,12493,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709879,,,train,sda-all,samples/GSE329718/GSM9709879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709880,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,8744,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709880,,,train,sda-all,samples/GSE329718/GSM9709880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709881,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,13497,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709881,,,train,sda-all,samples/GSE329718/GSM9709881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709882,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,10247,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709882,,,train,sda-all,samples/GSE329718/GSM9709882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709883,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9020,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709883,,,train,sda-all,samples/GSE329718/GSM9709883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709884,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9783,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709884,,,train,sda-all,samples/GSE329718/GSM9709884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709885,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9558,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709885,,,train,sda-all,samples/GSE329718/GSM9709885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709886,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9874,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709886,,,train,sda-all,samples/GSE329718/GSM9709886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9709887,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,9877,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,zero_count_observations,VERIFIED,,,,,,GSM9709887,,,train,sda-all,samples/GSE329718/GSM9709887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9709888,brain,perturbation,,insula,primary tissue,Mus musculus,house mouse,not stated,male,MERFISH/MERSCOPE,MERFISH,False,,5213,"Spatial resolved single-cell dissection of mouse insula cortex organization, projection and function",GSE329718,GSE329718,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002022,brain insula cortex 10μm slice,,luna,,,luna,not stated,,extracted field,male,,,fresh frozen,fresh frozen,release v3,imaging-based,MERFISH,,,cell,484,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,,,GSM9709888,,,train,sda-all,samples/GSE329718/GSM9709888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9720098,brain,perturbation,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),2865,Transcriptomic Signatures of Hippocampal Active Place Avoidance Memory Maintenance,GSE330153,GSE330153,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,Brain Tissue - Hippocampus,,luna,,Trained,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.174831709130877,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9720098,,,val,sda-all,samples/GSE330153/GSM9720098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9720099,brain,perturbation,,Ammon's horn,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),3055,Transcriptomic Signatures of Hippocampal Active Place Avoidance Memory Maintenance,GSE330153,GSE330153,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001954,Brain Tissue - Hippocampus,,luna,,Trained,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.15077914126167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9720099,,,val,sda-all,samples/GSE330153/GSM9720099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9720100,brain,normal,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),2359,Transcriptomic Signatures of Hippocampal Active Place Avoidance Memory Maintenance,GSE330153,GSE330153,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,Brain Tissue - Hippocampus,,luna,,Untrained,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.1879299021653145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9720100,,,val,sda-all,samples/GSE330153/GSM9720100,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9720101,brain,perturbation,,hippocampal formation,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,grayscale bright-field (heuristic),2661,Transcriptomic Signatures of Hippocampal Active Place Avoidance Memory Maintenance,GSE330153,GSE330153,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002421,Brain Tissue - Hippocampus,,luna,,Untrained,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.115636156493802,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9720101,,,val,sda-all,samples/GSE330153/GSM9720101,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.59, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9720202,uterus,not stated,,smooth muscle tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,156276,Human Myometrial Cell Fate under Chronic Oxidative Stress for Leiomyomagenesis,GSE330163,GSE330163,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001135,smooth muscle,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium_hd,,,bin,18085,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42539031,,GSM9720202,,,train,sda-all,samples/GSE330163/GSM9720202,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.78, ""disease_status"": 0.28, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9720203,uterus,not stated,,smooth muscle tissue,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,False,,295501,Human Myometrial Cell Fate under Chronic Oxidative Stress for Leiomyomagenesis,GSE330163,GSE330163,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001135,smooth muscle,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium_hd,,,bin,18085,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,42539031,,GSM9720203,,,train,sda-all,samples/GSE330163/GSM9720203,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.29, ""uberon"": 0.54, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9721577,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4617,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,71,extracted field,M,GSE330224:NY7149,NY7149,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.033834143386723,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721577,,,train,sda-all,samples/GSE330224/GSM9721577,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721578,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4486,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,71,extracted field,M,GSE330224:NY7149,NY7149,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.984540792565202,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721578,,,train,sda-all,samples/GSE330224/GSM9721578,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721579,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4909,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,71,extracted field,M,GSE330224:NY7149,NY7149,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9643241356001018,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721579,,,train,sda-all,samples/GSE330224/GSM9721579,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721580,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4729,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,67,extracted field,M,GSE330224:NEUHV061BZR,NEUHV061BZR,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.862631176435037,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721580,,,train,sda-all,samples/GSE330224/GSM9721580,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721581,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4982,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,67,extracted field,M,GSE330224:NEUHV061BZR,NEUHV061BZR,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8662886351151284,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721581,,,train,sda-all,samples/GSE330224/GSM9721581,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721582,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4802,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,67,extracted field,M,GSE330224:NEUHV061BZR,NEUHV061BZR,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.818826320828604,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721582,,,train,sda-all,samples/GSE330224/GSM9721582,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721583,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4654,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,67,extracted field,M,GSE330224:NEUHV061BZR,NEUHV061BZR,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8194451267323344,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721583,,,train,sda-all,samples/GSE330224/GSM9721583,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721584,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4937,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,74,extracted field,M,GSE330224:NEUXZ580AW6,NEUXZ580AW6,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8607990104583356,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721584,,,train,sda-all,samples/GSE330224/GSM9721584,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721585,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4958,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,74,extracted field,M,GSE330224:NEUXZ580AW6,NEUXZ580AW6,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.860537237293325,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721585,,,train,sda-all,samples/GSE330224/GSM9721585,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721587,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4970,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,43,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8546129390296326,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721587,,,train,sda-all,samples/GSE330224/GSM9721587,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721588,brain,disease,amyotrophic lateral sclerosis,primary motor cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3785,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001384,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,43,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.867415293013679,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721588,,,train,sda-all,samples/GSE330224/GSM9721588,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721589,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4829,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,43,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8355595489458354,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721589,,,train,sda-all,samples/GSE330224/GSM9721589,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721590,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4806,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,43,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8455131304399477,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721590,,,train,sda-all,samples/GSE330224/GSM9721590,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM9721591,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4986,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,33,extracted field,F,GSE330224:NEUTH315CBQ,NEUTH315CBQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8434700641954747,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721591,,,train,sda-all,samples/GSE330224/GSM9721591,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9721592,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,33,extracted field,F,GSE330224:NEUTH315CBQ,NEUTH315CBQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.858169857108779,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721592,,,train,sda-all,samples/GSE330224/GSM9721592,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9721593,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4748,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8829748419060652,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721593,,,train,sda-all,samples/GSE330224/GSM9721593,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721594,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4939,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8666296333160872,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721594,,,train,sda-all,samples/GSE330224/GSM9721594,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721595,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,33,extracted field,F,GSE330224:NEUTH315CBQ,NEUTH315CBQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8837094013024545,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721595,,,train,sda-all,samples/GSE330224/GSM9721595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9721596,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4976,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,33,extracted field,F,GSE330224:NEUTH315CBQ,NEUTH315CBQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.881809811295953,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721596,,,train,sda-all,samples/GSE330224/GSM9721596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.48, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721597,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4840,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8766413744573165,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721597,,,train,sda-all,samples/GSE330224/GSM9721597,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721598,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4874,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8839762805437217,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721598,,,train,sda-all,samples/GSE330224/GSM9721598,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721599,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3259,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,69,extracted field,F,GSE330224:NEUAP156PM4,NEUAP156PM4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.890607415657653,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721599,,,train,sda-all,samples/GSE330224/GSM9721599,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721600,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4000,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,69,extracted field,F,GSE330224:NEUAP156PM4,NEUAP156PM4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.904974457545604,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721600,,,train,sda-all,samples/GSE330224/GSM9721600,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721601,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3895,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,69,extracted field,F,GSE330224:NEUAP156PM4,NEUAP156PM4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9015057518300393,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721601,,,train,sda-all,samples/GSE330224/GSM9721601,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721602,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3573,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,69,extracted field,F,GSE330224:NEUAP156PM4,NEUAP156PM4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.897512571305688,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721602,,,train,sda-all,samples/GSE330224/GSM9721602,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721603,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.887868727230767,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721603,,,train,sda-all,samples/GSE330224/GSM9721603,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721604,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4976,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.920605312209149,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721604,,,train,sda-all,samples/GSE330224/GSM9721604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721605,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4409,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUEH612JPA,NEUEH612JPA,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8900792952116077,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721605,,,train,sda-all,samples/GSE330224/GSM9721605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721606,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4416,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUEH612JPA,NEUEH612JPA,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9210475303426358,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721606,,,train,sda-all,samples/GSE330224/GSM9721606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721607,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4980,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9055094396307446,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721607,,,train,sda-all,samples/GSE330224/GSM9721607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9721608,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4710,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.902295153799856,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721608,,,train,sda-all,samples/GSE330224/GSM9721608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.33, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721609,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4310,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUEH612JPA,NEUEH612JPA,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.899094104513946,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721609,,,train,sda-all,samples/GSE330224/GSM9721609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721610,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4504,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUEH612JPA,NEUEH612JPA,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.903599400412696,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721610,,,train,sda-all,samples/GSE330224/GSM9721610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721611,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4647,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUMP035RP4,NEUMP035RP4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8948396671267735,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721611,,,train,sda-all,samples/GSE330224/GSM9721611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721612,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4476,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUMP035RP4,NEUMP035RP4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.899699258332204,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721612,,,train,sda-all,samples/GSE330224/GSM9721612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721613,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3617,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUMP035RP4,NEUMP035RP4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.913780998430285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721613,,,train,sda-all,samples/GSE330224/GSM9721613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721614,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4187,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUMP035RP4,NEUMP035RP4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.904962826998218,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721614,,,train,sda-all,samples/GSE330224/GSM9721614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721615,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4636,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,54,extracted field,F,GSE330224:NEUHD481VCL,NEUHD481VCL,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8929094711308663,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721615,,,train,sda-all,samples/GSE330224/GSM9721615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721616,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4573,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,54,extracted field,F,GSE330224:NEUHD481VCL,NEUHD481VCL,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.930407848387514,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721616,,,train,sda-all,samples/GSE330224/GSM9721616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9721617,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3858,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,54,extracted field,F,GSE330224:NEUHD481VCL,NEUHD481VCL,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8957168856311983,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721617,,,train,sda-all,samples/GSE330224/GSM9721617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721618,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4550,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,54,extracted field,F,GSE330224:NEUHD481VCL,NEUHD481VCL,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8712001395165623,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721618,,,train,sda-all,samples/GSE330224/GSM9721618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9721619,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4301,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUGG230KV0,NEUGG230KV0,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.936000293873908,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721619,,,train,sda-all,samples/GSE330224/GSM9721619,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721620,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4526,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUGG230KV0,NEUGG230KV0,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8790886090098535,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721620,,,train,sda-all,samples/GSE330224/GSM9721620,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721621,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4664,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,58,extracted field,F,GSE330224:SD028/12,SD028/12,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.900179473580256,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721621,,,train,sda-all,samples/GSE330224/GSM9721621,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM9721622,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3450,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,58,extracted field,F,GSE330224:SD028/12,SD028/12,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.909884875865368,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721622,,,train,sda-all,samples/GSE330224/GSM9721622,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9721623,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3648,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:SD050/19,SD050/19,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8634268241623078,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721623,,,train,sda-all,samples/GSE330224/GSM9721623,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9721624,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4473,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:SD050/19,SD050/19,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9045875793271314,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721624,,,train,sda-all,samples/GSE330224/GSM9721624,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9721625,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4919,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,58,extracted field,F,GSE330224:SD028/12,SD028/12,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8984061008423554,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721625,,,train,sda-all,samples/GSE330224/GSM9721625,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9721626,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3915,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,58,extracted field,F,GSE330224:SD028/12,SD028/12,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8877528256280582,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721626,,,train,sda-all,samples/GSE330224/GSM9721626,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM9721627,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4589,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:SD050/19,SD050/19,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.913542272548379,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721627,,,train,sda-all,samples/GSE330224/GSM9721627,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721628,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4285,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:SD050/19,SD050/19,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9054536055233027,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721628,,,train,sda-all,samples/GSE330224/GSM9721628,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9721629,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3409,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,F,GSE330224:SD047/13,SD047/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8918785661680126,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721629,,,train,sda-all,samples/GSE330224/GSM9721629,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9721630,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3634,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,F,GSE330224:SD047/13,SD047/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9383659888438936,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721630,,,train,sda-all,samples/GSE330224/GSM9721630,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8, ""life_stage"": 1.0}",,
GSM9721631,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4197,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,55,extracted field,M,GSE330224:SD034/19,SD034/19,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8965135433388554,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721631,,,train,sda-all,samples/GSE330224/GSM9721631,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9721632,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4241,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,55,extracted field,M,GSE330224:SD034/19,SD034/19,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8970950617810827,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721632,,,train,sda-all,samples/GSE330224/GSM9721632,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM9721633,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3475,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,F,GSE330224:SD047/13,SD047/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.936401868675475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721633,,,train,sda-all,samples/GSE330224/GSM9721633,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM9721634,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4018,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,55,extracted field,M,GSE330224:SD034/19,SD034/19,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.938572780607701,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721634,,,train,sda-all,samples/GSE330224/GSM9721634,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721635,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3779,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,55,extracted field,M,GSE330224:SD034/19,SD034/19,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9256814516965686,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721635,,,train,sda-all,samples/GSE330224/GSM9721635,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.75, ""life_stage"": 1.0}",,
GSM9721636,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4792,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,73,extracted field,M,GSE330224:SD006/17,SD006/17,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9224777225582663,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721636,,,train,sda-all,samples/GSE330224/GSM9721636,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.34, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721637,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4247,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,73,extracted field,M,GSE330224:SD006/17,SD006/17,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9171074459401343,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721637,,,train,sda-all,samples/GSE330224/GSM9721637,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.35000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721638,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4697,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,73,extracted field,M,GSE330224:SD006/17,SD006/17,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.905121759195869,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721638,,,train,sda-all,samples/GSE330224/GSM9721638,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721639,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3953,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,73,extracted field,M,GSE330224:SD006/17,SD006/17,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.881986065462449,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721639,,,train,sda-all,samples/GSE330224/GSM9721639,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721640,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4456,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:SD008/13,SD008/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.901537641220136,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721640,,,train,sda-all,samples/GSE330224/GSM9721640,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721641,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3408,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:SD008/13,SD008/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.910759440483789,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721641,,,train,sda-all,samples/GSE330224/GSM9721641,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721642,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4504,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,47,extracted field,F,GSE330224:SD012/13,SD012/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8637463986546465,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721642,,,train,sda-all,samples/GSE330224/GSM9721642,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM9721643,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4727,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:SD008/13,SD008/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9021013441411445,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721643,,,train,sda-all,samples/GSE330224/GSM9721643,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9721644,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4396,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,47,extracted field,F,GSE330224:SD012/13,SD012/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9243344434859666,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721644,,,train,sda-all,samples/GSE330224/GSM9721644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9721645,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4483,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,47,extracted field,F,GSE330224:SD012/13,SD012/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.892783706640866,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721645,,,train,sda-all,samples/GSE330224/GSM9721645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.77, ""life_stage"": 1.0}",,
GSM9721646,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4842,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,M,GSE330224:SD014/16,SD014/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.931353017630463,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721646,,,train,sda-all,samples/GSE330224/GSM9721646,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721647,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4830,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,M,GSE330224:SD014/16,SD014/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.536115256694819,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721647,,,train,sda-all,samples/GSE330224/GSM9721647,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721648,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3431,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,49,extracted field,F,GSE330224:SD015/16,SD015/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9087953141198986,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721648,,,train,sda-all,samples/GSE330224/GSM9721648,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721649,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4557,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,M,GSE330224:SD014/16,SD014/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8894627312219536,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721649,,,train,sda-all,samples/GSE330224/GSM9721649,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.39, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721650,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4467,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,M,GSE330224:SD014/16,SD014/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9148821557173643,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721650,,,train,sda-all,samples/GSE330224/GSM9721650,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.36, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721651,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4944,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,49,extracted field,F,GSE330224:SD015/16,SD015/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8968752710271426,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721651,,,train,sda-all,samples/GSE330224/GSM9721651,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9721652,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4468,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,49,extracted field,F,GSE330224:SD015/16,SD015/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.942321985876636,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721652,,,train,sda-all,samples/GSE330224/GSM9721652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9721653,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4285,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:SD026/12,SD026/12,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9209329643171285,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721653,,,train,sda-all,samples/GSE330224/GSM9721653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721654,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3851,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:SD026/12,SD026/12,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8964856518208477,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721654,,,train,sda-all,samples/GSE330224/GSM9721654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9721655,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4032,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,66,extracted field,F,GSE330224:SD049/15,SD049/15,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9432737923050563,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721655,,,train,sda-all,samples/GSE330224/GSM9721655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9721656,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4136,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,66,extracted field,F,GSE330224:SD049/15,SD049/15,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9081566831084253,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721656,,,train,sda-all,samples/GSE330224/GSM9721656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",,
GSM9721657,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4142,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:SD026/12,SD026/12,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9089590136228924,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721657,,,train,sda-all,samples/GSE330224/GSM9721657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721658,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4470,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,66,extracted field,F,GSE330224:SD049/15,SD049/15,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.927923411275761,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721658,,,train,sda-all,samples/GSE330224/GSM9721658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721659,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4220,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD004/16,SD004/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.930032281172579,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721659,,,train,sda-all,samples/GSE330224/GSM9721659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.74, ""life_stage"": 1.0}",,
GSM9721660,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4946,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD004/16,SD004/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9343875893749396,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721660,,,train,sda-all,samples/GSE330224/GSM9721660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM9721661,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3541,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD004/16,SD004/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9274820560548367,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721661,,,train,sda-all,samples/GSE330224/GSM9721661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721662,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4296,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,"Non-neurological control, MS",,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:SD011/18,SD011/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9306720298103324,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721662,,,train,sda-all,samples/GSE330224/GSM9721662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721663,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4505,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,"Non-neurological control, MS",,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:SD011/18,SD011/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9388110219134638,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721663,,,train,sda-all,samples/GSE330224/GSM9721663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9721664,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3824,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,63,extracted field,M,GSE330224:SD030/18,SD030/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9523349131507013,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721664,,,train,sda-all,samples/GSE330224/GSM9721664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM9721665,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4121,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,63,extracted field,M,GSE330224:SD030/18,SD030/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.932065562659565,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721665,,,train,sda-all,samples/GSE330224/GSM9721665,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9721666,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4269,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,"Non-neurological control, MS",,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:SD011/18,SD011/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9350816119138163,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721666,,,train,sda-all,samples/GSE330224/GSM9721666,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9721667,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4577,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,"Non-neurological control, MS",,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:SD011/18,SD011/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9282205140316804,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721667,,,train,sda-all,samples/GSE330224/GSM9721667,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.8300000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9721668,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4712,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,63,extracted field,M,GSE330224:SD030/18,SD030/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9502808483323,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721668,,,train,sda-all,samples/GSE330224/GSM9721668,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9721669,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4888,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,63,extracted field,M,GSE330224:SD030/18,SD030/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9401984544538786,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721669,,,train,sda-all,samples/GSE330224/GSM9721669,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 1.0}",,
GSM9721670,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4946,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD010/14,SD010/14,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.919888535342243,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721670,,,train,sda-all,samples/GSE330224/GSM9721670,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM9721671,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4975,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD010/14,SD010/14,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9270528516672982,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721671,,,train,sda-all,samples/GSE330224/GSM9721671,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM9721672,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4857,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD010/14,SD010/14,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.945305471518055,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721672,,,train,sda-all,samples/GSE330224/GSM9721672,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9721673,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4852,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD010/14,SD010/14,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9476646682051593,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721673,,,train,sda-all,samples/GSE330224/GSM9721673,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721674,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4078,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUGG230KV0,NEUGG230KV0,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8992609956040623,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721674,,,train,sda-all,samples/GSE330224/GSM9721674,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721675,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4418,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUGG230KV0,NEUGG230KV0,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.861566352089657,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721675,,,train,sda-all,samples/GSE330224/GSM9721675,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721676,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4383,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:SD006/13,SD006/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.856743671586534,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721676,,,train,sda-all,samples/GSE330224/GSM9721676,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721677,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4614,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:SD006/13,SD006/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.917176110345185,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721677,,,train,sda-all,samples/GSE330224/GSM9721677,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM9721678,brain,disease,amyotrophic lateral sclerosis,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4034,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:SD006/13,SD006/13,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.961808367027013,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721678,,,train,sda-all,samples/GSE330224/GSM9721678,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9721679,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4771,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8812353278353835,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721679,,,train,sda-all,samples/GSE330224/GSM9721679,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721680,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3952,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8890650411040886,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721680,,,train,sda-all,samples/GSE330224/GSM9721680,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721681,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4952,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8568151965124655,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721681,,,train,sda-all,samples/GSE330224/GSM9721681,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721682,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3962,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8780484241789193,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721682,,,train,sda-all,samples/GSE330224/GSM9721682,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721683,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4601,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8913632061287147,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721683,,,train,sda-all,samples/GSE330224/GSM9721683,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721684,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4018,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8823667090958733,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721684,,,train,sda-all,samples/GSE330224/GSM9721684,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721685,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4695,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.855857873445461,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721685,,,train,sda-all,samples/GSE330224/GSM9721685,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721686,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3876,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8901544469690914,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721686,,,train,sda-all,samples/GSE330224/GSM9721686,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721687,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4220,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8554201050147077,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721687,,,train,sda-all,samples/GSE330224/GSM9721687,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721688,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3883,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.84572761831102,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721688,,,train,sda-all,samples/GSE330224/GSM9721688,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721689,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3383,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8257978627275637,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721689,,,train,sda-all,samples/GSE330224/GSM9721689,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721690,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4457,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8241479323179592,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721690,,,train,sda-all,samples/GSE330224/GSM9721690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721691,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8812490752202655,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721691,,,train,sda-all,samples/GSE330224/GSM9721691,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721692,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4946,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUXF746MEU,NEUXF746MEU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.860513857194805,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721692,,,train,sda-all,samples/GSE330224/GSM9721692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721693,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,2230,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8805258523188577,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721693,,,train,sda-all,samples/GSE330224/GSM9721693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721694,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4842,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUAJ995AXE,NEUAJ995AXE,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.911390460988297,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721694,,,train,sda-all,samples/GSE330224/GSM9721694,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721695,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4150,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.909616248701787,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721695,,,train,sda-all,samples/GSE330224/GSM9721695,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721696,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4119,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9245343713943077,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721696,,,train,sda-all,samples/GSE330224/GSM9721696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721697,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4404,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.903549537786024,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721697,,,train,sda-all,samples/GSE330224/GSM9721697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721698,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3032,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9296946559320225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721698,,,train,sda-all,samples/GSE330224/GSM9721698,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721699,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3309,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUAV181KYK,NEUAV181KYK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9572106967437213,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721699,,,train,sda-all,samples/GSE330224/GSM9721699,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721700,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4448,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9232326038004963,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721700,,,train,sda-all,samples/GSE330224/GSM9721700,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721701,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4121,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9357546151030522,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721701,,,train,sda-all,samples/GSE330224/GSM9721701,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721702,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2647,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUAV181KYK,NEUAV181KYK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.885654789705273,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721702,,,train,sda-all,samples/GSE330224/GSM9721702,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721703,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3832,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUAV181KYK,NEUAV181KYK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9270231204700456,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721703,,,train,sda-all,samples/GSE330224/GSM9721703,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721704,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4087,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.88950961636853,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721704,,,train,sda-all,samples/GSE330224/GSM9721704,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721705,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3614,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,F,GSE330224:NEUGT049MJ1,NEUGT049MJ1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9131154397091286,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721705,,,train,sda-all,samples/GSE330224/GSM9721705,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721706,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4941,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,,luna,Non-neurological control,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9306410680063375,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721706,,,train,sda-all,samples/GSE330224/GSM9721706,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721707,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4615,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,,luna,Non-neurological control,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.926881895150528,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721707,,,train,sda-all,samples/GSE330224/GSM9721707,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721708,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4972,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.965058580554747,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721708,,,train,sda-all,samples/GSE330224/GSM9721708,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721709,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4991,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9770979313563104,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721709,,,train,sda-all,samples/GSE330224/GSM9721709,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721710,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4630,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,,luna,Non-neurological control,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9292159925451005,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721710,,,train,sda-all,samples/GSE330224/GSM9721710,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721711,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9389193904967237,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721711,,,train,sda-all,samples/GSE330224/GSM9721711,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721712,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4956,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9031797796037044,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721712,,,train,sda-all,samples/GSE330224/GSM9721712,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721713,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4818,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9154096212711056,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721713,,,train,sda-all,samples/GSE330224/GSM9721713,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721714,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4722,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.918928104152551,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721714,,,train,sda-all,samples/GSE330224/GSM9721714,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721715,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.931577198315661,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721715,,,train,sda-all,samples/GSE330224/GSM9721715,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721716,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4931,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9585784431600235,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721716,,,train,sda-all,samples/GSE330224/GSM9721716,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721717,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4108,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9392463361678742,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721717,,,train,sda-all,samples/GSE330224/GSM9721717,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721718,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4812,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUWD570BTK,NEUWD570BTK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9453645717990518,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721718,,,train,sda-all,samples/GSE330224/GSM9721718,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721719,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.911442276264034,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721719,,,train,sda-all,samples/GSE330224/GSM9721719,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721720,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4978,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,M,GSE330224:NEUVM032BF2,NEUVM032BF2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.91182004980159,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721720,,,train,sda-all,samples/GSE330224/GSM9721720,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721721,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4448,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,59,extracted field,M,GSE330224:NEUWC334RTZ,NEUWC334RTZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.956664113417151,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721721,,,train,sda-all,samples/GSE330224/GSM9721721,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721722,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4572,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,59,extracted field,M,GSE330224:NEUWC334RTZ,NEUWC334RTZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9831478088764096,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721722,,,train,sda-all,samples/GSE330224/GSM9721722,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721723,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4579,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,59,extracted field,M,GSE330224:NEUWC334RTZ,NEUWC334RTZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.906426267487017,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721723,,,train,sda-all,samples/GSE330224/GSM9721723,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721724,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4398,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,59,extracted field,M,GSE330224:NEUWC334RTZ,NEUWC334RTZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.916120767808027,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721724,,,train,sda-all,samples/GSE330224/GSM9721724,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721725,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4620,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,M,GSE330224:NEUXH792ZDW,NEUXH792ZDW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8930662594319396,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721725,,,train,sda-all,samples/GSE330224/GSM9721725,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721726,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4558,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,M,GSE330224:NEUXH792ZDW,NEUXH792ZDW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.900792371176228,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721726,,,train,sda-all,samples/GSE330224/GSM9721726,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721727,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4903,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64.02,extracted field,F,GSE330224:NEUHZ641WRK,NEUHZ641WRK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.919131965872795,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721727,,,train,sda-all,samples/GSE330224/GSM9721727,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721728,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4990,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64.02,extracted field,F,GSE330224:NEUHZ641WRK,NEUHZ641WRK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8574310747580802,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721728,,,train,sda-all,samples/GSE330224/GSM9721728,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721729,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4694,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,M,GSE330224:NEUXH792ZDW,NEUXH792ZDW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9037684656810803,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721729,,,train,sda-all,samples/GSE330224/GSM9721729,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9721730,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4640,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,M,GSE330224:NEUXH792ZDW,NEUXH792ZDW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.871462416804938,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721730,,,train,sda-all,samples/GSE330224/GSM9721730,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721731,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4263,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64.02,extracted field,F,GSE330224:NEUHZ641WRK,NEUHZ641WRK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.891913622822466,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721731,,,train,sda-all,samples/GSE330224/GSM9721731,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721732,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3918,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64.02,extracted field,F,GSE330224:NEUHZ641WRK,NEUHZ641WRK,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8837592889411607,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721732,,,train,sda-all,samples/GSE330224/GSM9721732,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721733,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4521,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,43,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9127844642411587,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721733,,,train,sda-all,samples/GSE330224/GSM9721733,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721734,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4154,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,43,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9050250407719442,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721734,,,train,sda-all,samples/GSE330224/GSM9721734,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721735,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4909,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,43,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.918485316769232,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721735,,,train,sda-all,samples/GSE330224/GSM9721735,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721736,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4850,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,43,extracted field,M,GSE330224:NEULU857ERQ,NEULU857ERQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.890758171564677,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721736,,,train,sda-all,samples/GSE330224/GSM9721736,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721737,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3836,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.910165433824194,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721737,,,train,sda-all,samples/GSE330224/GSM9721737,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721738,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9166921533552115,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721738,,,train,sda-all,samples/GSE330224/GSM9721738,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721739,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4923,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.919872349513773,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721739,,,train,sda-all,samples/GSE330224/GSM9721739,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721740,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4933,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,61,extracted field,F,GSE330224:NEUJK532EBW,NEUJK532EBW,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9383290518099647,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721740,,,train,sda-all,samples/GSE330224/GSM9721740,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721757,spinal cord,disease,amyotrophic lateral sclerosis;frontotemporal dementia,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4739,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,68,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9077325785049215,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721757,,,train,sda-all,samples/GSE330224/GSM9721757,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721758,spinal cord,disease,amyotrophic lateral sclerosis;frontotemporal dementia,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4333,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,68,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9426285305201314,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721758,,,train,sda-all,samples/GSE330224/GSM9721758,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721759,spinal cord,disease,amyotrophic lateral sclerosis;frontotemporal dementia,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4124,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,68,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9237643856186653,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721759,,,train,sda-all,samples/GSE330224/GSM9721759,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721760,spinal cord,disease,amyotrophic lateral sclerosis;frontotemporal dementia,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4397,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,68,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9347164972374995,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721760,,,train,sda-all,samples/GSE330224/GSM9721760,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721761,spinal cord,disease,amyotrophic lateral sclerosis;frontotemporal dementia,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4072,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,72,extracted field,M,GSE330224:NEUXD265LJ8,NEUXD265LJ8,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.926531860020496,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721761,,,train,sda-all,samples/GSE330224/GSM9721761,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721762,spinal cord,disease,amyotrophic lateral sclerosis;frontotemporal dementia,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4601,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,72,extracted field,M,GSE330224:NEUXD265LJ8,NEUXD265LJ8,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.934689457840964,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721762,,,train,sda-all,samples/GSE330224/GSM9721762,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721763,spinal cord,disease,amyotrophic lateral sclerosis;frontotemporal dementia,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3733,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,72,extracted field,M,GSE330224:NEUXD265LJ8,NEUXD265LJ8,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9465398778537937,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721763,,,train,sda-all,samples/GSE330224/GSM9721763,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721764,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4692,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,M,GSE330224:NEUHC994KV4,NEUHC994KV4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.951726607328189,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721764,,,train,sda-all,samples/GSE330224/GSM9721764,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721765,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4950,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,M,GSE330224:NEUHC994KV4,NEUHC994KV4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9134851389783702,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721765,,,train,sda-all,samples/GSE330224/GSM9721765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721766,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4009,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9328511604524676,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721766,,,train,sda-all,samples/GSE330224/GSM9721766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721767,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3956,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9303472288901022,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721767,,,train,sda-all,samples/GSE330224/GSM9721767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721768,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4593,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,M,GSE330224:NEUHC994KV4,NEUHC994KV4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9320846306769592,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721768,,,train,sda-all,samples/GSE330224/GSM9721768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721769,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4810,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,M,GSE330224:NEUHC994KV4,NEUHC994KV4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9574814985406377,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721769,,,train,sda-all,samples/GSE330224/GSM9721769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9721770,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4074,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.954074214901491,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721770,,,train,sda-all,samples/GSE330224/GSM9721770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721771,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4221,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9394423904188423,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721771,,,train,sda-all,samples/GSE330224/GSM9721771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721772,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4504,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,46,extracted field,M,GSE330224:NEUGD051YM7,NEUGD051YM7,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.932658016811341,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721772,,,train,sda-all,samples/GSE330224/GSM9721772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721773,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3651,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,46,extracted field,M,GSE330224:NEUGD051YM7,NEUGD051YM7,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9513610201113143,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721773,,,train,sda-all,samples/GSE330224/GSM9721773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721774,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3885,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9337864715218736,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721774,,,train,sda-all,samples/GSE330224/GSM9721774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721775,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4452,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9303226824682276,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721775,,,train,sda-all,samples/GSE330224/GSM9721775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721776,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3262,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,46,extracted field,M,GSE330224:NEUGD051YM7,NEUGD051YM7,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9628950159071294,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721776,,,train,sda-all,samples/GSE330224/GSM9721776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721777,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3295,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,46,extracted field,M,GSE330224:NEUGD051YM7,NEUGD051YM7,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.939635204189321,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721777,,,train,sda-all,samples/GSE330224/GSM9721777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9721778,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3826,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9488682353284217,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721778,,,train,sda-all,samples/GSE330224/GSM9721778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721779,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4746,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9252833172464405,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721779,,,train,sda-all,samples/GSE330224/GSM9721779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721780,brain,disease,amyotrophic lateral sclerosis;frontotemporal dementia,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4185,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,68,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.89236016762313,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721780,,,train,sda-all,samples/GSE330224/GSM9721780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721781,brain,disease,amyotrophic lateral sclerosis;frontotemporal dementia,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4123,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,68,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.932231931938845,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721781,,,train,sda-all,samples/GSE330224/GSM9721781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721782,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3355,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUFR417RN4,NEUFR417RN4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9265930901469113,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721782,,,train,sda-all,samples/GSE330224/GSM9721782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9721783,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3807,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUFR417RN4,NEUFR417RN4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9539105336755376,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721783,,,train,sda-all,samples/GSE330224/GSM9721783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721784,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4506,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,79,extracted field,F,GSE330224:NEUYJ579GT6,NEUYJ579GT6,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9549507559916792,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721784,,,train,sda-all,samples/GSE330224/GSM9721784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721785,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4875,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,79,extracted field,F,GSE330224:NEUYJ579GT6,NEUYJ579GT6,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9576020227073916,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721785,,,train,sda-all,samples/GSE330224/GSM9721785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721786,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4416,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.936468940003593,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721786,,,train,sda-all,samples/GSE330224/GSM9721786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721787,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4199,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.94788832055062,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721787,,,train,sda-all,samples/GSE330224/GSM9721787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721788,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3207,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,79,extracted field,F,GSE330224:NEUYJ579GT6,NEUYJ579GT6,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9596163822957116,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721788,,,train,sda-all,samples/GSE330224/GSM9721788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721789,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4862,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,79,extracted field,F,GSE330224:NEUYJ579GT6,NEUYJ579GT6,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.984588398830031,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721789,,,train,sda-all,samples/GSE330224/GSM9721789,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721790,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4602,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.984563099550727,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721790,,,train,sda-all,samples/GSE330224/GSM9721790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721791,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4673,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9358784999102503,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721791,,,train,sda-all,samples/GSE330224/GSM9721791,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721792,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4214,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,F,GSE330224:NEUZF190CT2,NEUZF190CT2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.947547648639948,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721792,,,train,sda-all,samples/GSE330224/GSM9721792,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721793,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4390,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,F,GSE330224:NEUZF190CT2,NEUZF190CT2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9408552262179524,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721793,,,train,sda-all,samples/GSE330224/GSM9721793,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721794,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4116,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUPN968LVX,NEUPN968LVX,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.965368564963052,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721794,,,train,sda-all,samples/GSE330224/GSM9721794,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721795,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3878,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUPN968LVX,NEUPN968LVX,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9557798598859404,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721795,,,train,sda-all,samples/GSE330224/GSM9721795,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721796,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4021,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,F,GSE330224:NEUZF190CT2,NEUZF190CT2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.032742881895467,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721796,,,train,sda-all,samples/GSE330224/GSM9721796,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721797,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2741,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,70,extracted field,F,GSE330224:NEUZF190CT2,NEUZF190CT2,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.941132395969211,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721797,,,train,sda-all,samples/GSE330224/GSM9721797,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721798,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3760,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUPN968LVX,NEUPN968LVX,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.956290266745499,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721798,,,train,sda-all,samples/GSE330224/GSM9721798,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721799,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4827,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUPN968LVX,NEUPN968LVX,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.051800128350943,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721799,,,train,sda-all,samples/GSE330224/GSM9721799,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721800,brain,disease,amyotrophic lateral sclerosis;frontotemporal dementia,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4688,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,68,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.930117999477982,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721800,,,train,sda-all,samples/GSE330224/GSM9721800,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721801,brain,disease,amyotrophic lateral sclerosis;frontotemporal dementia,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4639,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976;MONDO:0017276,luna,ALS-FTD,,age rule: bare number read as years,aged,68,extracted field,F,GSE330224:NEUKT470MVZ,NEUKT470MVZ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9638996348536866,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721801,,,train,sda-all,samples/GSE330224/GSM9721801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9721802,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3620,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUFR417RN4,NEUFR417RN4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9469011680203034,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721802,,,train,sda-all,samples/GSE330224/GSM9721802,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721803,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4934,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,64,extracted field,M,GSE330224:NEUFR417RN4,NEUFR417RN4,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9375812687775005,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721803,,,train,sda-all,samples/GSE330224/GSM9721803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721804,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4019,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.918207930734208,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721804,,,train,sda-all,samples/GSE330224/GSM9721804,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721805,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4239,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9298581791883325,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721805,,,train,sda-all,samples/GSE330224/GSM9721805,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721806,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4140,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9704619104426304,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721806,,,train,sda-all,samples/GSE330224/GSM9721806,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721807,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3963,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,65,extracted field,M,GSE330224:NEUDJ612NZM,NEUDJ612NZM,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.949203317884086,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721807,,,train,sda-all,samples/GSE330224/GSM9721807,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721808,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4947,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.013508602155177,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721808,,,train,sda-all,samples/GSE330224/GSM9721808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721809,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4126,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.879282568755762,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721809,,,train,sda-all,samples/GSE330224/GSM9721809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721810,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4794,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.032430665934507,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721810,,,train,sda-all,samples/GSE330224/GSM9721810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721811,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4973,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUCY461UB1,NEUCY461UB1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.0068999933779645,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721811,,,train,sda-all,samples/GSE330224/GSM9721811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721812,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4847,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:NEURD732NWQ,NEURD732NWQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9249476649318673,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721812,,,train,sda-all,samples/GSE330224/GSM9721812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721813,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4860,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:NEURD732NWQ,NEURD732NWQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9856804034922515,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721813,,,train,sda-all,samples/GSE330224/GSM9721813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721814,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4916,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,57,extracted field,M,GSE330224:NEURD732NWQ,NEURD732NWQ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.906855213116718,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721814,,,train,sda-all,samples/GSE330224/GSM9721814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721815,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3815,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUXV447YXF,NEUXV447YXF,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9876186441169774,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721815,,,train,sda-all,samples/GSE330224/GSM9721815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721816,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3406,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUXV447YXF,NEUXV447YXF,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.985143532030854,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721816,,,train,sda-all,samples/GSE330224/GSM9721816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721817,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3564,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.960996024765736,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721817,,,train,sda-all,samples/GSE330224/GSM9721817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721818,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,3460,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9713433658700517,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721818,,,train,sda-all,samples/GSE330224/GSM9721818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721819,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4290,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUXV447YXF,NEUXV447YXF,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.928793156494199,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721819,,,train,sda-all,samples/GSE330224/GSM9721819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9721820,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3406,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUXV447YXF,NEUXV447YXF,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9164376114592176,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721820,,,train,sda-all,samples/GSE330224/GSM9721820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9400000000000001, ""life_stage"": 1.0}",,
GSM9721821,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,2960,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Medial,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.944354988992396,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721821,,,train,sda-all,samples/GSE330224/GSM9721821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9721822,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4193,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.90625096835312,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721822,,,train,sda-all,samples/GSE330224/GSM9721822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9721823,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4128,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9063317386895138,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721823,,,train,sda-all,samples/GSE330224/GSM9721823,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721824,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,3979,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8914392129582307,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721824,,,train,sda-all,samples/GSE330224/GSM9721824,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721825,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4504,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.899142327527079,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721825,,,train,sda-all,samples/GSE330224/GSM9721825,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721826,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4108,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.928697541130549,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721826,,,train,sda-all,samples/GSE330224/GSM9721826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721827,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4278,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9304678710658596,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721827,,,train,sda-all,samples/GSE330224/GSM9721827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721828,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4766,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,59,extracted field,M,GSE330224:NEUXW577JCD,NEUXW577JCD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9242417665260105,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721828,,,train,sda-all,samples/GSE330224/GSM9721828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721829,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4466,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9555868526220177,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721829,,,train,sda-all,samples/GSE330224/GSM9721829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721830,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4596,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,60,extracted field,M,GSE330224:NEUGA843KLV,NEUGA843KLV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9224974149950183,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721830,,,train,sda-all,samples/GSE330224/GSM9721830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721831,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4626,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,59,extracted field,M,GSE330224:NEUXW577JCD,NEUXW577JCD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.931372263834568,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721831,,,train,sda-all,samples/GSE330224/GSM9721831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721832,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4959,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,51,extracted field,F,GSE330224:NY7075,NY7075,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.956437973513443,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721832,,,train,sda-all,samples/GSE330224/GSM9721832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721833,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4983,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,51,extracted field,F,GSE330224:NY7075,NY7075,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.931638315803112,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721833,,,train,sda-all,samples/GSE330224/GSM9721833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721834,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4955,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,34,extracted field,F,GSE330224:NY7094,NY7094,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8835979299365544,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721834,,,train,sda-all,samples/GSE330224/GSM9721834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721835,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4958,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,34,extracted field,F,GSE330224:NY7094,NY7094,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.881228271590543,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721835,,,train,sda-all,samples/GSE330224/GSM9721835,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9721836,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4763,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,51,extracted field,F,GSE330224:NY7075,NY7075,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8921101781148337,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721836,,,train,sda-all,samples/GSE330224/GSM9721836,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6000000000000001, ""life_stage"": 1.0}",,
GSM9721837,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4986,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,51,extracted field,F,GSE330224:NY7075,NY7075,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8798757979195493,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721837,,,train,sda-all,samples/GSE330224/GSM9721837,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.6900000000000001, ""life_stage"": 1.0}",,
GSM9721838,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4950,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,34,extracted field,F,GSE330224:NY7094,NY7094,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8815234689085383,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721838,,,train,sda-all,samples/GSE330224/GSM9721838,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.33, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721839,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4803,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,adult,34,extracted field,F,GSE330224:NY7094,NY7094,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8971339208387112,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721839,,,train,sda-all,samples/GSE330224/GSM9721839,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721840,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4673,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD004/16,SD004/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.886223221754625,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721840,,,train,sda-all,samples/GSE330224/GSM9721840,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721841,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4443,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD004/16,SD004/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8699487737311236,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721841,,,train,sda-all,samples/GSE330224/GSM9721841,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721842,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4221,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,M,GSE330224:NEUBL101LGP,NEUBL101LGP,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.88026724511731,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721842,,,train,sda-all,samples/GSE330224/GSM9721842,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721843,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4784,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD004/16,SD004/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9025695099238846,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721843,,,train,sda-all,samples/GSE330224/GSM9721843,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721844,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4781,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:SD004/16,SD004/16,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.93916150216962,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721844,,,train,sda-all,samples/GSE330224/GSM9721844,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721845,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4651,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,M,GSE330224:NEUBL101LGP,NEUBL101LGP,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.956048273015538,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721845,,,train,sda-all,samples/GSE330224/GSM9721845,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721846,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4720,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,M,GSE330224:NEUBL101LGP,NEUBL101LGP,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.900506370869296,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721846,,,train,sda-all,samples/GSE330224/GSM9721846,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721847,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4621,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,85,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.925829120690428,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721847,,,train,sda-all,samples/GSE330224/GSM9721847,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721848,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4722,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,85,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9331133985979827,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721848,,,train,sda-all,samples/GSE330224/GSM9721848,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721849,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4590,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,85,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9303737473805107,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721849,,,train,sda-all,samples/GSE330224/GSM9721849,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721850,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4850,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,85,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9756922515517785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721850,,,train,sda-all,samples/GSE330224/GSM9721850,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9721851,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,2815,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,85,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.923350639157875,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721851,,,train,sda-all,samples/GSE330224/GSM9721851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721852,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4270,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,85,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9404557530420656,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721852,,,train,sda-all,samples/GSE330224/GSM9721852,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721853,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3989,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,85,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.933858425839191,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721853,,,train,sda-all,samples/GSE330224/GSM9721853,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721854,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4988,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,85,extracted field,M,GSE330224:NEULV205HP5,NEULV205HP5,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.957594399145882,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721854,,,train,sda-all,samples/GSE330224/GSM9721854,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721855,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4991,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,67,extracted field,M,GSE330224:NEUEL766XR1,NEUEL766XR1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.921710073942271,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721855,,,train,sda-all,samples/GSE330224/GSM9721855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721856,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3416,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,67,extracted field,M,GSE330224:NEUEL766XR1,NEUEL766XR1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8768805303727896,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721856,,,train,sda-all,samples/GSE330224/GSM9721856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721857,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4399,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,67,extracted field,M,GSE330224:NEUEL766XR1,NEUEL766XR1,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9071889157040225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721857,,,train,sda-all,samples/GSE330224/GSM9721857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9721858,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4916,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9030689325554997,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721858,,,train,sda-all,samples/GSE330224/GSM9721858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721859,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8859729614723837,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721859,,,train,sda-all,samples/GSE330224/GSM9721859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721860,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3907,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,F,GSE330224:NEUFU395MJD,NEUFU395MJD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.884563662214831,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721860,,,train,sda-all,samples/GSE330224/GSM9721860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9721861,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4344,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,F,GSE330224:NEUFU395MJD,NEUFU395MJD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.896179135541645,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721861,,,train,sda-all,samples/GSE330224/GSM9721861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721862,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.865451711944526,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721862,,,train,sda-all,samples/GSE330224/GSM9721862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721863,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4879,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,"ALS Spectrum MND, Other Neurological Disorders",,age rule: bare number read as years,aged,69,extracted field,M,GSE330224:NEUGJ562DR9,NEUGJ562DR9,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.917840812565124,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721863,,,train,sda-all,samples/GSE330224/GSM9721863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721864,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4384,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,F,GSE330224:NEUFU395MJD,NEUFU395MJD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.888692577605744,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721864,,,train,sda-all,samples/GSE330224/GSM9721864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721865,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3842,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,76,extracted field,F,GSE330224:NEUFU395MJD,NEUFU395MJD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8493416396011946,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721865,,,train,sda-all,samples/GSE330224/GSM9721865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721866,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4946,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,adult,52,extracted field,M,GSE330224:NEUWT414AYT,NEUWT414AYT,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.889445289312504,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721866,,,train,sda-all,samples/GSE330224/GSM9721866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721867,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4983,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,adult,52,extracted field,M,GSE330224:NEUWT414AYT,NEUWT414AYT,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.881746761591895,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721867,,,train,sda-all,samples/GSE330224/GSM9721867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721868,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4991,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,adult,52,extracted field,M,GSE330224:NEUWT414AYT,NEUWT414AYT,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8673227385973172,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721868,,,train,sda-all,samples/GSE330224/GSM9721868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721869,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,male,Visium,Visium,True,H&E,4712,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,adult,52,extracted field,M,GSE330224:NEUWT414AYT,NEUWT414AYT,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.924791529982416,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721869,,,train,sda-all,samples/GSE330224/GSM9721869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721870,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4920,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,80,extracted field,M,GSE330224:NEUPG593UTV,NEUPG593UTV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9118570512378166,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721870,,,train,sda-all,samples/GSE330224/GSM9721870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721871,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4451,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,80,extracted field,M,GSE330224:NEUPG593UTV,NEUPG593UTV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8835576155272764,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721871,,,train,sda-all,samples/GSE330224/GSM9721871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9721872,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4502,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,80,extracted field,M,GSE330224:NEUPG593UTV,NEUPG593UTV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8973082207041654,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721872,,,train,sda-all,samples/GSE330224/GSM9721872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9721873,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4211,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,80,extracted field,M,GSE330224:NEUPG593UTV,NEUPG593UTV,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8924289763473734,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721873,,,train,sda-all,samples/GSE330224/GSM9721873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9721874,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4917,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,81,extracted field,F,GSE330224:SD010/18,SD010/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.897005054788699,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721874,,,train,sda-all,samples/GSE330224/GSM9721874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721875,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4893,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,81,extracted field,F,GSE330224:SD010/18,SD010/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.900376601510334,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721875,,,train,sda-all,samples/GSE330224/GSM9721875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721876,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4884,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,81,extracted field,F,GSE330224:SD010/18,SD010/18,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.907282648234693,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721876,,,train,sda-all,samples/GSE330224/GSM9721876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721877,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4591,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8800932095941136,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721877,,,train,sda-all,samples/GSE330224/GSM9721877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721878,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4647,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8790209673892506,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721878,,,train,sda-all,samples/GSE330224/GSM9721878,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721879,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4777,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.911705503787481,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721879,,,train,sda-all,samples/GSE330224/GSM9721879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721880,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,adult,female,Visium,Visium,True,H&E,4838,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,adult,62,extracted field,F,GSE330224:NEUPH726JJJ,NEUPH726JJJ,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8715211802911433,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721880,,,train,sda-all,samples/GSE330224/GSM9721880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721881,brain,disease,amyotrophic lateral sclerosis,cortex,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,4551,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,68,extracted field,M,GSE330224:NEUXV447YXF,NEUXV447YXF,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.894256968123996,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721881,,,train,sda-all,samples/GSE330224/GSM9721881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721882,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,3782,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8857558177435503,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721882,,,train,sda-all,samples/GSE330224/GSM9721882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721883,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4727,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8907757139133166,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721883,,,train,sda-all,samples/GSE330224/GSM9721883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721884,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4851,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.886863380800975,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721884,,,train,sda-all,samples/GSE330224/GSM9721884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9721885,spinal cord,disease,amyotrophic lateral sclerosis,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4925,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,MONDO:0004976,luna,ALS,,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NEUDM397JGD,NEUDM397JGD,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.9008162051783226,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721885,,,train,sda-all,samples/GSE330224/GSM9721885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721886,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3411,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,aged,71,extracted field,M,GSE330224:NY7149,NY7149,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8860999508089766,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721886,,,train,sda-all,samples/GSE330224/GSM9721886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.41000000000000003, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721887,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4990,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.878455173619078,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721887,,,train,sda-all,samples/GSE330224/GSM9721887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9721888,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4762,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.90662320478887,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721888,,,train,sda-all,samples/GSE330224/GSM9721888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9721889,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4747,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.893890516049536,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721889,,,train,sda-all,samples/GSE330224/GSM9721889,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721890,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4887,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.890780362225121,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721890,,,train,sda-all,samples/GSE330224/GSM9721890,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721891,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4992,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.912492182343667,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721891,,,train,sda-all,samples/GSE330224/GSM9721891,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721892,brain,normal,,cortex,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4687,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,Cortex_Motor_Lateral,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8885314313118533,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721892,,,train,sda-all,samples/GSE330224/GSM9721892,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9721893,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4800,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8711081391922884,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721893,,,train,sda-all,samples/GSE330224/GSM9721893,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721894,spinal cord,normal,,lumbar spinal cord,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4966,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002792,Spinal_Cord_Lumbar,,luna,Non-neurological control,,age rule: bare number read as years,aged,75,extracted field,F,GSE330224:NEUCG659ERU,NEUCG659ERU,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8914275928908455,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721894,,,train,sda-all,samples/GSE330224/GSM9721894,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9721895,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,4354,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NY7183,NY7183,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.873781326496257,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721895,,,train,sda-all,samples/GSE330224/GSM9721895,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.46, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9721896,brain,normal,,Brodmann (1909) area 4,primary tissue,Homo sapiens,human,aged,female,Visium,Visium,True,H&E,2670,A multi-omics characterization of the human lumbar spinal cord and motor cortex reveals non-overlapping molecular signatures in ALS,GSE330224,GSE330224,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0013535,Cortex_Motor_BA4,,luna,Non-neurological control,,age rule: bare number read as years,aged,71,extracted field,F,GSE330224:NY7183,NY7183,,,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,3.8800084066236167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9721896,,,train,sda-all,samples/GSE330224/GSM9721896,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.64, ""life_stage"": 1.0}",,
GSM9730462,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,57883,CXCL10 contributes to female-specific pathological progression in tauopathy model mice,GSE330686,GSE330686,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wild-type,age rule: age with unit,adult,12-month-old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000093021332892,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42557563,,GSM9730462,,,train,sda-all,samples/GSE330686/GSM9730462,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9730463,brain,disease,tauopathy,brain,primary tissue,Mus musculus,house mouse,adult,male,Xenium,Xenium,True,fluorescence: DAPI,63003,CXCL10 contributes to female-specific pathological progression in tauopathy model mice,GSE330686,GSE330686,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0005574,luna,,Tau transgenic,age rule: age with unit,adult,12-month-old,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.4999803605391549,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42557563,,GSM9730463,,,train,sda-all,samples/GSE330686/GSM9730463,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9730464,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,72622,CXCL10 contributes to female-specific pathological progression in tauopathy model mice,GSE330686,GSE330686,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Wild-type,age rule: age with unit,adult,12-month-old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000093999097609,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42557563,,GSM9730464,,,train,sda-all,samples/GSE330686/GSM9730464,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9730465,brain,disease,tauopathy,brain,primary tissue,Mus musculus,house mouse,adult,female,Xenium,Xenium,True,fluorescence: DAPI,69038,CXCL10 contributes to female-specific pathological progression in tauopathy model mice,GSE330686,GSE330686,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,MONDO:0005574,luna,,Tau transgenic,age rule: age with unit,adult,12-month-old,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.49998778103616814,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42557563,,GSM9730465,,,train,sda-all,samples/GSE330686/GSM9730465,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9733696,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,139637,MERFISH spatial transcriptomic profiling of Sst+ interneurons in the postnatal mouse brain,GSE330849,GSE330849,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,age rule: postnatal day,neonatal or infant,P5,not stated,,,,fresh frozen,Fresh-frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,42547805,,GSM9733696,,,train,sda-all,samples/GSE330849/GSM9733696,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9733697,brain,normal,,brain,primary tissue,Mus musculus,house mouse,neonatal or infant,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,118952,MERFISH spatial transcriptomic profiling of Sst+ interneurons in the postnatal mouse brain,GSE330849,GSE330849,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,,age rule: postnatal day,neonatal or infant,P5,not stated,,,,fresh frozen,Fresh-frozen,release v3,imaging-based,MERSCOPE,,,cell,550,counts,um,1.0,verified,,ABSENT,ABSENT,VERIFIED,,,VERIFIED,,,,42547805,,GSM9733697,,,train,sda-all,samples/GSE330849/GSM9733697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9734766,placenta,normal,,placenta,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,357577,The challenges of single cell transcriptomics on difficult human tissue: the placenta [Xenium],GSE330886,GSE330886,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001987,Placenta,,luna,,control,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999982773668979,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42466067,,GSM9734766,,,train,sda-all,samples/GSE330886/GSM9734766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9736137,colon,normal,,ascending colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,45446,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001156,Ascending colon,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000044253009206,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736137,,,train,sda-all,samples/GSE330953/GSM9736137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736138,colon,normal,,caecum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,21515,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001153,Caecum,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999948403962575,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736138,,,train,sda-all,samples/GSE330953/GSM9736138,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.98}",,
GSM9736139,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,29515,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999671214861088,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736139,,,train,sda-all,samples/GSE330953/GSM9736139,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736140,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,50637,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000180747779385,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736140,,,train,sda-all,samples/GSE330953/GSM9736140,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736141,colon,disease,inflammatory bowel disease,transverse colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,35084,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001157,Transverse colon,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000295020061364,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736141,,,train,sda-all,samples/GSE330953/GSM9736141,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736142,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,43530,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736142,,,train,sda-all,samples/GSE330953/GSM9736142,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736143,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,33939,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736143,,,train,sda-all,samples/GSE330953/GSM9736143,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736144,small intestine,disease,inflammatory bowel disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,91644,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Terminal ileum,MONDO:0005265,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000109566741798,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736144,,,train,sda-all,samples/GSE330953/GSM9736144,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9736145,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16193,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999781829873231,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736145,,,train,sda-all,samples/GSE330953/GSM9736145,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736146,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,24201,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736146,,,train,sda-all,samples/GSE330953/GSM9736146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736147,colon,normal,,ascending colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,27901,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001156,Ascending colon,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736147,,,train,sda-all,samples/GSE330953/GSM9736147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736148,small intestine,normal,,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,20025,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Terminal ileum,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736148,,,train,sda-all,samples/GSE330953/GSM9736148,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9736149,colon,disease,ulcerative colitis,caecum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,16215,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001153,Caecum,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736149,,,train,sda-all,samples/GSE330953/GSM9736149,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736150,colon,disease,inflammatory bowel disease,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,21966,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736150,,,train,sda-all,samples/GSE330953/GSM9736150,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736151,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,47862,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736151,,,train,sda-all,samples/GSE330953/GSM9736151,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736152,colon,disease,ulcerative colitis,caecum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,28371,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001153,Caecum,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736152,,,train,sda-all,samples/GSE330953/GSM9736152,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736153,colon,disease,ulcerative colitis,caecum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,41098,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001153,Caecum,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998972715318857,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736153,,,train,sda-all,samples/GSE330953/GSM9736153,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736154,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,28380,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998392725936813,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736154,,,train,sda-all,samples/GSE330953/GSM9736154,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736155,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,41309,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000141884222474,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736155,,,train,sda-all,samples/GSE330953/GSM9736155,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736156,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24399,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998969011429245,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736156,,,train,sda-all,samples/GSE330953/GSM9736156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736157,colon,disease,ulcerative colitis,ascending colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,39747,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001156,Ascending colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999927632123067,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736157,,,train,sda-all,samples/GSE330953/GSM9736157,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736158,colon,normal,,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,53880,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999484642341785,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736158,,,train,sda-all,samples/GSE330953/GSM9736158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736159,colon,normal,,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,34963,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736159,,,train,sda-all,samples/GSE330953/GSM9736159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736160,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,29139,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736160,,,train,sda-all,samples/GSE330953/GSM9736160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736161,colon,normal,,ascending colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,25263,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001156,Ascending colon,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736161,,,train,sda-all,samples/GSE330953/GSM9736161,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736162,colon,normal,,transverse colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55451,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001157,Transverse colon,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000111284219898,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736162,,,train,sda-all,samples/GSE330953/GSM9736162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9736163,colon,disease,inflammatory bowel disease,descending colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,54265,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001158,Descending colon,MONDO:0005265,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999673853336995,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736163,,,train,sda-all,samples/GSE330953/GSM9736163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736164,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,43984,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000086076298029,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736164,,,train,sda-all,samples/GSE330953/GSM9736164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736165,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,34169,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000076734192755,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736165,,,train,sda-all,samples/GSE330953/GSM9736165,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736166,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,75372,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000128945739633,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736166,,,train,sda-all,samples/GSE330953/GSM9736166,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736167,small intestine,disease,inflammatory bowel disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,26561,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Terminal ileum,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736167,,,train,sda-all,samples/GSE330953/GSM9736167,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9736168,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,48017,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736168,,,train,sda-all,samples/GSE330953/GSM9736168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736169,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,35884,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736169,,,train,sda-all,samples/GSE330953/GSM9736169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736170,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,26764,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736170,,,train,sda-all,samples/GSE330953/GSM9736170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736171,colon,disease,inflammatory bowel disease,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,63805,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999962454945935,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736171,,,train,sda-all,samples/GSE330953/GSM9736171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736172,colon,normal,,ascending colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,19108,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001156,Ascending colon,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000408719346049,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736172,,,train,sda-all,samples/GSE330953/GSM9736172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736173,colon,normal,,ascending colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,24640,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001156,Ascending colon,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736173,,,train,sda-all,samples/GSE330953/GSM9736173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736174,colon,normal,,transverse colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,27389,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001157,Transverse colon,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736174,,,train,sda-all,samples/GSE330953/GSM9736174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736175,colon,disease,ulcerative colitis,descending colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,35725,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001158,Descending colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736175,,,train,sda-all,samples/GSE330953/GSM9736175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736176,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,51458,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736176,,,train,sda-all,samples/GSE330953/GSM9736176,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736177,small intestine,disease,inflammatory bowel disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,49342,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Terminal ileum,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736177,,,train,sda-all,samples/GSE330953/GSM9736177,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736178,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55499,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005101,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999655884377153,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736178,,,train,sda-all,samples/GSE330953/GSM9736178,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736179,small intestine,disease,inflammatory bowel disease,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,35839,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Terminal ileum,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000175210252302,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736179,,,train,sda-all,samples/GSE330953/GSM9736179,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9736180,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,48266,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005101,luna,,No treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736180,,,train,sda-all,samples/GSE330953/GSM9736180,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9736181,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,16181,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736181,,,train,sda-all,samples/GSE330953/GSM9736181,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736182,colon,disease,ulcerative colitis,descending colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,16221,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001158,Descending colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736182,,,train,sda-all,samples/GSE330953/GSM9736182,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736183,colon,disease,ulcerative colitis,descending colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,14689,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001158,Descending colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000208750835003,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736183,,,train,sda-all,samples/GSE330953/GSM9736183,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736184,colon,disease,ulcerative colitis,sigmoid colon,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,28220,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001159,Sigmoid colon,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499973321293712,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736184,,,train,sda-all,samples/GSE330953/GSM9736184,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736185,small intestine,normal,,ileum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,76574,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002116,Terminal ileum,,luna,,,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998580864898334,VERIFIED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736185,,,train,sda-all,samples/GSE330953/GSM9736185,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9736186,rectum,disease,inflammatory bowel disease,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,18758,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005265,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,FAILED,PARTIAL,VERIFIED,,,VERIFIED,FAIL,,,42658927,,GSM9736186,,,train,sda-all,samples/GSE330953/GSM9736186,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9736187,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,14580,A necroptotic-to-apoptotic signaling axis underlies inflammatory bowel disease,GSE330953,GSE330953,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001052,Rectum,MONDO:0005101,luna,,Treatment,luna,not stated,,not stated,,,,FFPE,Formalin-fixed paraffin-embedded,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000051482701812,FAILED,PARTIAL,VERIFIED,,,VERIFIED,PASS,,,42658927,,GSM9736187,,,train,sda-all,samples/GSE330953/GSM9736187,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9739520,other,disease,reproductive system disorder,wall of vagina,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),460658,Single-Cell and Spatial Multi-Omics Reveal Estrogen-Mediated Vaginal Wall Microenvironment Remodeling and a Perivascular Reparative Niche in Postmenopausal Pelvic Organ Prolapse,GSE331133,GSE331133,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0036523,anterior vaginal wall,MONDO:0005039,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,3.638743483266041,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9739520,,,train,sda-all,samples/GSE331133/GSM9739520,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9739528,other,disease,pelvic organ prolapse,wall of vagina,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),477585,Single-Cell and Spatial Multi-Omics Reveal Estrogen-Mediated Vaginal Wall Microenvironment Remodeling and a Perivascular Reparative Niche in Postmenopausal Pelvic Organ Prolapse,GSE331133,GSE331133,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0036523,anterior vaginal wall,MONDO:0000082,luna,,topical vaginal estrogen,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,3.633386635652753,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9739528,,,train,sda-all,samples/GSE331133/GSM9739528,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9742275,airway,perturbation,,nasal cavity,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,False,,359988,TRPV1–STAT3 signaling as a driver of lethal pathology during pneumococcal nose-to-brain invasion,GSE331225,GSE331225,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001707,nasal cavity including olfactory bulb,,luna,,none or methimazole,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium HD,,,bin,19084,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,,,GSM9742275,,,train,sda-all,samples/GSE331225/GSM9742275,sda-tissue-disease-2.3,"{""organ"": 0.32, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.97, ""life_stage"": 1.0}",organ;disease_status,low_confidence_annotation
GSM9742276,head and neck,perturbation,,nasal cavity,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,False,,386851,TRPV1–STAT3 signaling as a driver of lethal pathology during pneumococcal nose-to-brain invasion,GSE331225,GSE331225,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001707,nasal cavity including olfactory bulb,,luna,,resiniferatoxin and/or methimazole,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium HD,,,bin,19084,counts,um,1.0,declared_unverified,,,,,attested,,ATTESTED,,,,,,GSM9742276,,,train,sda-all,samples/GSE331225/GSM9742276,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9743253,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,1830,Understanding the spatial and temporal regulation of the βIV-spectrin/STAT3 complex in ischemic cardiac remodeling with spatial transcriptomics.,GSE331286,GSE331286,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0005068,luna,,MI KO,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.943672285993975,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9743253,,,train,sda-all,samples/GSE331286/GSM9743253,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9743255,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,1998,Understanding the spatial and temporal regulation of the βIV-spectrin/STAT3 complex in ischemic cardiac remodeling with spatial transcriptomics.,GSE331286,GSE331286,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0005068,luna,,MI WT,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.007603996837567,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9743255,,,train,sda-all,samples/GSE331286/GSM9743255,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9743259,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,1744,Understanding the spatial and temporal regulation of the βIV-spectrin/STAT3 complex in ischemic cardiac remodeling with spatial transcriptomics.,GSE331286,GSE331286,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0005068,luna,,MI WT,luna,not stated,,extracted field,Female,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.942246637567191,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9743259,,,train,sda-all,samples/GSE331286/GSM9743259,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9743262,heart,disease,myocardial infarction,heart,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,2415,Understanding the spatial and temporal regulation of the βIV-spectrin/STAT3 complex in ischemic cardiac remodeling with spatial transcriptomics.,GSE331286,GSE331286,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000948,Heart,MONDO:0005068,luna,,MI KO,luna,not stated,,extracted field,Male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.0091530465476035,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9743262,,,train,sda-all,samples/GSE331286/GSM9743262,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9744831,brain,disease,brain glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2930,Glioma-intrinsic MAPK/ERK signaling promotes immunotherapy efficacy through T cell infiltration and interferon responses,GSE331374,GSE331374,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain/glioblastoma,MONDO:0002501,luna,,Naive,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.064661132810943,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42350396,,GSM9744831,,,train,sda-all,samples/GSE331374/GSM9744831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9744832,brain,disease,brain glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2287,Glioma-intrinsic MAPK/ERK signaling promotes immunotherapy efficacy through T cell infiltration and interferon responses,GSE331374,GSE331374,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain/glioblastoma,MONDO:0002501,luna,,Naive,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.077019559258785,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42350396,,GSM9744832,,,train,sda-all,samples/GSE331374/GSM9744832,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9744833,brain,disease,brain glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2555,Glioma-intrinsic MAPK/ERK signaling promotes immunotherapy efficacy through T cell infiltration and interferon responses,GSE331374,GSE331374,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain/glioblastoma,MONDO:0002501,luna,,BRAFi/MEKi,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.071406681365135,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42350396,,GSM9744833,,,train,sda-all,samples/GSE331374/GSM9744833,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9744834,brain,disease,brain glioblastoma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3228,Glioma-intrinsic MAPK/ERK signaling promotes immunotherapy efficacy through T cell infiltration and interferon responses,GSE331374,GSE331374,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,brain/glioblastoma,MONDO:0002501,luna,,Temozolomide,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.192366741348693,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42350396,,GSM9744834,,,train,sda-all,samples/GSE331374/GSM9744834,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9746006,heart,disease,heart disorder,right atrium auricular region,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2153,Epicardial fat drives macrophage response in atrial cardiomyopathy,GSE331446,GSE331446,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006631,right atrial appendage,MONDO:0005267,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.5989442750318545,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9746006,,,val,sda-all,samples/GSE331446/GSM9746006,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.99, ""disease_status"": 0.23, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9746007,heart,disease,cardiomyopathy,right atrium auricular region,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3383,Epicardial fat drives macrophage response in atrial cardiomyopathy,GSE331446,GSE331446,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006631,right atrial appendage,MONDO:0004994,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.597888124925952,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9746007,,,val,sda-all,samples/GSE331446/GSM9746007,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 0.93, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9746008,heart,disease,heart disorder,right atrium auricular region,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,1990,Epicardial fat drives macrophage response in atrial cardiomyopathy,GSE331446,GSE331446,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006631,right atrial appendage,MONDO:0005267,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9746008,,,val,sda-all,samples/GSE331446/GSM9746008,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.98, ""disease_status"": 0.19, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9746009,heart,disease,heart disorder,right atrium auricular region,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2956,Epicardial fat drives macrophage response in atrial cardiomyopathy,GSE331446,GSE331446,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006631,right atrial appendage,MONDO:0005267,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,5.099164703505003,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9746009,,,val,sda-all,samples/GSE331446/GSM9746009,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.23, ""uberon"": 0.79, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9746010,heart,disease,heart disorder,right atrium auricular region,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2133,Epicardial fat drives macrophage response in atrial cardiomyopathy,GSE331446,GSE331446,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006631,right atrial appendage,MONDO:0005267,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.090912857714803,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9746010,,,val,sda-all,samples/GSE331446/GSM9746010,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.17, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9749285,other,disease,cancer;neuroblastoma,,xenograft,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,812720,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,GSE331531,GSE331531,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999874623871614,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9749285,,,train,sda-all,samples/GSE331531/GSM9749285,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9749287,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,235264,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,GSE331531,GSE331531,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999088212410037,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9749287,,,train,sda-all,samples/GSE331531/GSM9749287,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9749288,other,disease,cancer;neuroblastoma,,xenograft,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,661550,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,GSE331531,GSE331531,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999935430549098,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM9749288,,,train,sda-all,samples/GSE331531/GSM9749288,sda-tissue-disease-2.3,"{""organ"": 0.9, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9982048,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,170021,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,GSE331531,GSE331531,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000144472880376,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9982048,,,train,sda-all,samples/GSE331531/GSM9982048,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9982049,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1281532,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,GSE331531,GSE331531,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999827332166874,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9982049,,,train,sda-all,samples/GSE331531/GSM9982049,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9982050,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,173494,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,GSE331531,GSE331531,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998843832148765,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9982050,,,train,sda-all,samples/GSE331531/GSM9982050,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9982051,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,709176,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics,GSE331531,GSE331531,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103403450721,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9982051,,,train,sda-all,samples/GSE331531/GSM9982051,sda-tissue-disease-2.3,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9750808,spleen,normal,,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4571,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.7565131845344633,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750808,,,train,sda-all,samples/GSE332563/GSM9750808,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.61, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9750809,spleen,normal,,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4963,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.8341433667262255,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750809,,,train,sda-all,samples/GSE332563/GSM9750809,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9750810,spleen,normal,,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4988,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.6252627499506502,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750810,,,train,sda-all,samples/GSE332563/GSM9750810,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9750811,spleen,disease,myelofibrosis,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4992,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,MONDO:0044903,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.97035170239624,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750811,,,train,sda-all,samples/GSE332563/GSM9750811,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9750812,spleen,disease,myelofibrosis,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4896,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,MONDO:0044903,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.8135505361115487,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750812,,,train,sda-all,samples/GSE332563/GSM9750812,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9750813,spleen,disease,myelofibrosis,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4867,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,MONDO:0044903,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.7711022845700004,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750813,,,train,sda-all,samples/GSE332563/GSM9750813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9750814,spleen,disease,myelofibrosis,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4979,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,MONDO:0044903,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.706672018808113,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750814,,,train,sda-all,samples/GSE332563/GSM9750814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9750815,spleen,disease,myelofibrosis,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4873,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,MONDO:0044903,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.615600693053306,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750815,,,train,sda-all,samples/GSE332563/GSM9750815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9750816,spleen,disease,myelofibrosis,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4992,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,MONDO:0044903,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.724458805458826,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750816,,,train,sda-all,samples/GSE332563/GSM9750816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9750817,spleen,disease,myelofibrosis,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4663,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,MONDO:0044903,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.832474551830448,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750817,,,train,sda-all,samples/GSE332563/GSM9750817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9750818,spleen,disease,myelofibrosis,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4948,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,MONDO:0044903,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.6995327545977954,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750818,,,train,sda-all,samples/GSE332563/GSM9750818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9750819,spleen,disease,myelofibrosis,spleen,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4905,Comprehensive spatial profiling of the spleen in human myelofibrosis [ST_Visium],GSE332563,GSE332563,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002106,Spleen,MONDO:0044903,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.557224983352789,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9750819,,,train,sda-all,samples/GSE332563/GSM9750819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9751331,liver,perturbation,,left lobe of liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,2407,Spatial transcriptomics profiling of NDMA-induced liver injury in Mgmt-deficient mice across sex and time,GSE332601,GSE332601,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001115,Liver (left lobe),,luna,,NDMA (3.5 mg/kg i.p. day 8 + 7 mg/kg i.p. day 15),luna,adult,,sample text,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.07031108249757,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9751331,,,train,sda-all,samples/GSE332601/GSM9751331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.72, ""uberon"": 1.0, ""life_stage"": 0.54}",life_stage,low_confidence_annotation
GSM9751332,liver,perturbation,,left lobe of liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3613,Spatial transcriptomics profiling of NDMA-induced liver injury in Mgmt-deficient mice across sex and time,GSE332601,GSE332601,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001115,Liver (left lobe),,luna,,Saline vehicle (i.p. at postnatal days 8 and 15),luna,adult,,sample text,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.955418991319632,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9751332,,,train,sda-all,samples/GSE332601/GSM9751332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9751333,liver,perturbation,,left lobe of liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3554,Spatial transcriptomics profiling of NDMA-induced liver injury in Mgmt-deficient mice across sex and time,GSE332601,GSE332601,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001115,Liver (left lobe),,luna,,NDMA (3.5 mg/kg i.p. day 8 + 7 mg/kg i.p. day 15),luna,adult,,sample text,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.003623006121493,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9751333,,,train,sda-all,samples/GSE332601/GSM9751333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 0.79}",,
GSM9751334,liver,perturbation,,left lobe of liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3906,Spatial transcriptomics profiling of NDMA-induced liver injury in Mgmt-deficient mice across sex and time,GSE332601,GSE332601,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001115,Liver (left lobe),,luna,,Saline vehicle (i.p. at postnatal days 8 and 15),luna,adult,,sample text,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.020202073927256,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9751334,,,train,sda-all,samples/GSE332601/GSM9751334,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9846517,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),188119,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,4.663712789685634,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846517,,,val,sda-all,samples/GSE332618/GSM9846517,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846518,other,disease,cancer;neuroblastoma,,xenograft,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),108221,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,1.6761677737620706,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846518,,,val,sda-all,samples/GSE332618/GSM9846518,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846519,other,disease,cancer;neuroblastoma,,xenograft,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),266507,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,1.8598496651122227,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846519,,,val,sda-all,samples/GSE332618/GSM9846519,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846520,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),73627,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,4.676929365369501,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846520,,,val,sda-all,samples/GSE332618/GSM9846520,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846521,other,disease,cancer;neuroblastoma,,xenograft,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),85543,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,1.5214054735864622,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846521,,,val,sda-all,samples/GSE332618/GSM9846521,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846522,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),243956,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,4.664238507219088,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846522,,,val,sda-all,samples/GSE332618/GSM9846522,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846523,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),157107,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,4.6660894277122384,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846523,,,val,sda-all,samples/GSE332618/GSM9846523,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846524,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),157580,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,4.6769972865118215,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846524,,,val,sda-all,samples/GSE332618/GSM9846524,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846525,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),145659,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,4.666221938402553,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846525,,,val,sda-all,samples/GSE332618/GSM9846525,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846526,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),166724,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,4.666343716664983,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846526,,,val,sda-all,samples/GSE332618/GSM9846526,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846527,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),255196,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,4.674941724910843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846527,,,val,sda-all,samples/GSE332618/GSM9846527,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846528,other,disease,cancer;neuroblastoma,,xenograft,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),138481,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,1.769633084534206,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846528,,,val,sda-all,samples/GSE332618/GSM9846528,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846529,other,disease,cancer;neuroblastoma,,xenograft,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),216925,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,1.859191655758768,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846529,,,val,sda-all,samples/GSE332618/GSM9846529,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846530,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),54700,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,4.67720421977008,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846530,,,val,sda-all,samples/GSE332618/GSM9846530,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9846531,unknown,disease,cancer;neuroblastoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),77363,Identification and Characterization of Adrenergic and Mesenchymal Cancer Cell States in Neuroblastoma Using Spatial-Omics [Spatial Transcriptomics],GSE332618,GSE332618,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004992;MONDO:0005072,luna,NBL,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,4.674935065970432,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9846531,,,val,sda-all,samples/GSE332618/GSM9846531,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9752692,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,350126,Local control of Cre-regulated genetic modeling in vivo using wireless implantable optoelectronics [Spatial transcriptomics],GSE332731,GSE332731,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Mouse Lung,,luna,,E-LightR-Cre + local optoelectronic illumination,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium HD,,,bin,19059,counts,um,1.0,verified,2.088215038292686,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9752692,,,train,sda-all,samples/GSE332731/GSM9752692,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 0.51, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9752693,lung,disease,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E,347278,Local control of Cre-regulated genetic modeling in vivo using wireless implantable optoelectronics [Spatial transcriptomics],GSE332731,GSE332731,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Mouse Lung,,luna,,E-LightR-Cre + local optoelectronic illumination,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,visium HD,,,bin,19059,counts,um,1.0,verified,1.6642344059201735,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9752693,,,train,sda-all,samples/GSE332731/GSM9752693,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.65, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9754317,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,16977,Xenium Spatial Transcriptomics Reveals the Mechanism of TGFBRIIDN-Armored GPC3-CAR-T Cells in Hepatocellular Carcinoma Patients,GSE332850,GSE332850,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Primary or metastatic lesions of hepatocellular carcinoma,MONDO:0007256,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9754317,,,train,sda-all,samples/GSE332850/GSM9754317,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9754325,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,4436,Xenium Spatial Transcriptomics Reveals the Mechanism of TGFBRIIDN-Armored GPC3-CAR-T Cells in Hepatocellular Carcinoma Patients,GSE332850,GSE332850,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Primary or metastatic lesions of hepatocellular carcinoma,MONDO:0007256,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9754325,,,train,sda-all,samples/GSE332850/GSM9754325,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9754328,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,24966,Xenium Spatial Transcriptomics Reveals the Mechanism of TGFBRIIDN-Armored GPC3-CAR-T Cells in Hepatocellular Carcinoma Patients,GSE332850,GSE332850,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Primary or metastatic lesions of hepatocellular carcinoma,MONDO:0007256,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9754328,,,train,sda-all,samples/GSE332850/GSM9754328,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9754329,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,9756,Xenium Spatial Transcriptomics Reveals the Mechanism of TGFBRIIDN-Armored GPC3-CAR-T Cells in Hepatocellular Carcinoma Patients,GSE332850,GSE332850,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Primary or metastatic lesions of hepatocellular carcinoma,MONDO:0007256,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9754329,,,train,sda-all,samples/GSE332850/GSM9754329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759690,small intestine,normal,,duodenum,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),198623,Spatial Rewiring of Enterocyte Identity in Celiac Disease [Visium],GSE333244,GSE333244,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002114,Duodenum,,luna,Control,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,VisiumHD,,,bin,18085,unknown,pixel,,unresolved,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9759690,,,train,sda-all,samples/GSE333244/GSM9759690,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759691,small intestine,disease,duodenal disorder;celiac disease,duodenum,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),156800,Spatial Rewiring of Enterocyte Identity in Celiac Disease [Visium],GSE333244,GSE333244,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002114,Duodenum,MONDO:0002866;MONDO:0005130,luna,Celiac disease,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,VisiumHD,,,bin,18085,unknown,pixel,,unresolved,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9759691,,,train,sda-all,samples/GSE333244/GSM9759691,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759692,small intestine,disease,duodenal disorder;celiac disease,duodenum,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),112895,Spatial Rewiring of Enterocyte Identity in Celiac Disease [Visium],GSE333244,GSE333244,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002114,Duodenum,MONDO:0002866;MONDO:0005130,luna,Celiac disease,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,VisiumHD,,,bin,18085,unknown,pixel,,unresolved,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9759692,,,train,sda-all,samples/GSE333244/GSM9759692,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9759693,small intestine,disease,duodenal disorder;celiac disease,duodenum,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),50317,Spatial Rewiring of Enterocyte Identity in Celiac Disease [Visium],GSE333244,GSE333244,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002114,Duodenum,MONDO:0002866;MONDO:0005130,luna,Celiac disease,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,VisiumHD,,,bin,18085,unknown,pixel,,unresolved,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9759693,,,train,sda-all,samples/GSE333244/GSM9759693,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9762113,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,female,Visium,Visium,True,H&E-like (heuristic),2281,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,CT,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9473143798751402,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762113,,,val,sda-all,samples/GSE333401/GSM9762113,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",disease_status,low_confidence_annotation
GSM9762114,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,female,Visium,Visium,True,H&E-like (heuristic),1372,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,CT,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.92341276939329,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762114,,,val,sda-all,samples/GSE333401/GSM9762114,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.31, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9762115,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,female,Visium,Visium,True,H&E-like (heuristic),1624,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,CT,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.952356475954416,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762115,,,val,sda-all,samples/GSE333401/GSM9762115,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.79}",disease_status,low_confidence_annotation
GSM9762116,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,female,Visium,Visium,True,H&E-like (heuristic),2087,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,CT,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9296154749879793,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762116,,,val,sda-all,samples/GSE333401/GSM9762116,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.58}",disease_status;life_stage,low_confidence_annotation
GSM9762117,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,male,Visium,Visium,True,fluorescence: magenta (heuristic),1237,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,CT,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.973283754618098,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762117,,,val,sda-all,samples/GSE333401/GSM9762117,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 0.58}",disease_status;life_stage,low_confidence_annotation
GSM9762118,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,male,Visium,Visium,True,fluorescence: magenta (heuristic),859,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,CT,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9695357640142688,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762118,,,val,sda-all,samples/GSE333401/GSM9762118,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.65}",disease_status,low_confidence_annotation
GSM9762119,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,male,Visium,Visium,True,H&E-like (heuristic),1861,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,CT,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9354338109182554,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762119,,,val,sda-all,samples/GSE333401/GSM9762119,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 0.71}",disease_status,low_confidence_annotation
GSM9762120,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,female,Visium,Visium,True,H&E-like (heuristic),2080,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,DBP,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,4.03599210848384,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762120,,,val,sda-all,samples/GSE333401/GSM9762120,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.98, ""life_stage"": 0.81}",,
GSM9762121,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,female,Visium,Visium,True,H&E-like (heuristic),1961,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,DBP,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9037917573085226,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762121,,,val,sda-all,samples/GSE333401/GSM9762121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.73}",,
GSM9762122,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,female,Visium,Visium,True,H&E-like (heuristic),1365,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,DBP,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9620576390709923,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762122,,,val,sda-all,samples/GSE333401/GSM9762122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.86}",,
GSM9762123,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,male,Visium,Visium,True,H&E-like (heuristic),1598,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,DBP,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.937800569746858,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762123,,,val,sda-all,samples/GSE333401/GSM9762123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.76}",,
GSM9762124,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,male,Visium,Visium,True,H&E-like (heuristic),1587,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,DBP,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.9240241273675784,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762124,,,val,sda-all,samples/GSE333401/GSM9762124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.72}",,
GSM9762125,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,fetal,male,Visium,Visium,True,H&E-like (heuristic),2411,Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles,GSE333401,GSE333401,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001987,Placenta,,luna,,DBP,luna,fetal,,sample text,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,32285,counts,um,1.0,verified,3.942943303187447,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9762125,,,val,sda-all,samples/GSE333401/GSM9762125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 0.7000000000000001}",,
GSM9765770,colon,normal,,large intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,28685,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000059,large intestine,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,27275,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765770,,,train,sda-all,samples/GSE333479/GSM9765770,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9765771,colon,normal,,large intestine,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,29310,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000059,large intestine,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,24869,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765771,,,train,sda-all,samples/GSE333479/GSM9765771,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9765772,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,108434,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,24836,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765772,,,train,sda-all,samples/GSE333479/GSM9765772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765773,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,106238,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,25082,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765773,,,train,sda-all,samples/GSE333479/GSM9765773,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765774,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,113170,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,24848,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765774,,,train,sda-all,samples/GSE333479/GSM9765774,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765775,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,156908,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,27076,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765775,,,train,sda-all,samples/GSE333479/GSM9765775,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765776,kidney,normal,,kidney,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,66851,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002113,kidney,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,25552,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765776,,,train,sda-all,samples/GSE333479/GSM9765776,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765777,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,23806,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,25284,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765777,,,train,sda-all,samples/GSE333479/GSM9765777,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.45, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9765778,skin,normal,,zone of skin,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,24885,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000014,skin,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,24698,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765778,,,train,sda-all,samples/GSE333479/GSM9765778,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9765779,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,24315,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002370,thymus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,bin,24233,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765779,,,train,sda-all,samples/GSE333479/GSM9765779,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9765780,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,20196,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002370,thymus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,bin,25956,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765780,,,train,sda-all,samples/GSE333479/GSM9765780,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9765781,thymus,normal,,thymus,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,17760,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002370,thymus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,bin,23332,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765781,,,train,sda-all,samples/GSE333479/GSM9765781,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765782,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,16053,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002106,spleen,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,bin,28010,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765782,,,train,sda-all,samples/GSE333479/GSM9765782,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9765783,spleen,normal,,spleen,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,12667,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002106,spleen,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,bin,26158,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765783,,,train,sda-all,samples/GSE333479/GSM9765783,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9765784,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,110554,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,28490,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765784,,,train,sda-all,samples/GSE333479/GSM9765784,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765785,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,12941,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,uterus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,27133,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765785,,,train,sda-all,samples/GSE333479/GSM9765785,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765786,uterus,normal,,uterus,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,13325,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000995,uterus,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,25106,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765786,,,train,sda-all,samples/GSE333479/GSM9765786,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765787,testis,normal,,testis,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,148070,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000473,testis,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,27526,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765787,,,train,sda-all,samples/GSE333479/GSM9765787,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765788,testis,normal,,testis,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,140228,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000473,testis,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,26840,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765788,,,train,sda-all,samples/GSE333479/GSM9765788,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9765789,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,51698,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,ovary,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,27378,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765789,,,train,sda-all,samples/GSE333479/GSM9765789,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9765790,ovary,normal,,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,46599,A unified spatial transcriptome profiling of ten mouse organs,GSE333479,GSE333479,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,ovary,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Stereo-seq,,,cell,24674,counts,um,1.0,verified,,,,,,,VERIFIED,,,,42374103,,GSM9765790,,,train,sda-all,samples/GSE333479/GSM9765790,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9767741,kidney,disease,systemic lupus erythematosus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,769,A skin–kidney neutrophil axis links UV exposure to renal angiogenesis and tissue remodeling in healthy and lupus kidneys. [Spatial Transcriptomics],GSE333529,GSE333529,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0007915,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.42566673798747,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42679049,,GSM9767741,,,train,sda-all,samples/GSE333529/GSM9767741,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9767742,kidney,disease,systemic lupus erythematosus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,955,A skin–kidney neutrophil axis links UV exposure to renal angiogenesis and tissue remodeling in healthy and lupus kidneys. [Spatial Transcriptomics],GSE333529,GSE333529,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0007915,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,3.2647170106598553,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42679049,,GSM9767742,,,train,sda-all,samples/GSE333529/GSM9767742,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9767743,kidney,disease,systemic lupus erythematosus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,900,A skin–kidney neutrophil axis links UV exposure to renal angiogenesis and tissue remodeling in healthy and lupus kidneys. [Spatial Transcriptomics],GSE333529,GSE333529,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0007915,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.075396827384211,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42679049,,GSM9767743,,,train,sda-all,samples/GSE333529/GSM9767743,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.71, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9767744,kidney,disease,systemic lupus erythematosus,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,830,A skin–kidney neutrophil axis links UV exposure to renal angiogenesis and tissue remodeling in healthy and lupus kidneys. [Spatial Transcriptomics],GSE333529,GSE333529,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0007915,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.80898419011643,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42679049,,GSM9767744,,,train,sda-all,samples/GSE333529/GSM9767744,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9769919,skin,disease,Stevens-Johnson syndrome,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2296,Targeting JAK1/3-STAT1 signaling attenuates cytotoxic T lymphocytes activation for the treatment in Stevens-Johnson syndrome and toxic epidermal necrolysis,GSE333617,GSE333617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0018229,luna,SJS/TEN,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,6.996819919949294,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9769919,,,train,sda-all,samples/GSE333617/GSM9769919,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9769920,skin,disease,Stevens-Johnson syndrome,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2516,Targeting JAK1/3-STAT1 signaling attenuates cytotoxic T lymphocytes activation for the treatment in Stevens-Johnson syndrome and toxic epidermal necrolysis,GSE333617,GSE333617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0018229,luna,SJS/TEN,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.109669939378263,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9769920,,,train,sda-all,samples/GSE333617/GSM9769920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.67, ""life_stage"": 1.0}",,
GSM9769921,skin,disease,Stevens-Johnson syndrome,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2082,Targeting JAK1/3-STAT1 signaling attenuates cytotoxic T lymphocytes activation for the treatment in Stevens-Johnson syndrome and toxic epidermal necrolysis,GSE333617,GSE333617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,MONDO:0018229,luna,HD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,17943,counts,um,1.0,verified,4.086611054520036,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9769921,,,train,sda-all,samples/GSE333617/GSM9769921,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9769922,skin,normal,,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3862,Targeting JAK1/3-STAT1 signaling attenuates cytotoxic T lymphocytes activation for the treatment in Stevens-Johnson syndrome and toxic epidermal necrolysis,GSE333617,GSE333617,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,skin,,manual,HD,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,10.731588419458864,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9769922,,,train,sda-all,samples/GSE333617/GSM9769922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 0.47000000000000003, ""life_stage"": 1.0}",uberon,normal_but_disease_text;low_confidence_annotation
GSM9457959,blood vessel,disease,coronary artery disorder,aorta,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,49909,Vascular smooth muscle cell state trajectories mediate molecular mechanisms of coronary disease risk,GSE333685,GSE333685,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000947,Aorta,MONDO:0005010,luna,,"ApoE-/-, Rosa26-Tdt+/+",luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.499999059938332,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,41844614,,GSM9457959,,,train,sda-all,samples/GSE333685/GSM9457959,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9770943,thymus,normal,,thymus,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Stereo-seq,Stereo-seq,False,,796801,Rat thymic epithelium-free areas are specialized medullary niches enriched for mature thymocytes and distinct stromal subsets,GSE333693,GSE333693,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,,luna,UBERON:0002370,Thymus,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Stereo-seq,,,cell,38507,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9770943,,,train,sda-all,samples/GSE333693/GSM9770943,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771950,lung,normal,,lung,primary tissue,Gallus gallus,chicken,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1018,TGFbeta determines epithelial tissue spacing by regulating mesenchymal condensation,GSE333735,GSE333735,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,,luna,UBERON:0002048,Embryonic lung,,luna,,WT,luna,embryonic,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,16128,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42446999,,GSM9771950,,,train,sda-all,samples/GSE333735/GSM9771950,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9771951,lung,normal,,lung,primary tissue,Gallus gallus,chicken,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1091,TGFbeta determines epithelial tissue spacing by regulating mesenchymal condensation,GSE333735,GSE333735,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,,luna,UBERON:0002048,Embryonic lung,,luna,,WT,luna,embryonic,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,15916,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42446999,,GSM9771951,,,train,sda-all,samples/GSE333735/GSM9771951,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771952,lung,normal,,lung,primary tissue,Gallus gallus,chicken,embryonic,unknown,DBiT-seq,DBiT-seq,False,,1421,TGFbeta determines epithelial tissue spacing by regulating mesenchymal condensation,GSE333735,GSE333735,9031,Gallus gallus,9031,,False,False,GEO organism field,Gallus gallus,,luna,UBERON:0002048,Embryonic lung,,luna,,WT,luna,embryonic,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,20128,unknown,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42446999,,GSM9771952,,,train,sda-all,samples/GSE333735/GSM9771952,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9771965,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,aged,female,MERFISH/MERSCOPE,MERSCOPE,False,,547317,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,,luna,non-diabetic,,age rule: bare number read as years,aged,73,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771965,,,train,sda-all,samples/GSE333737/GSM9771965,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771966,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,aged,male,MERFISH/MERSCOPE,MERSCOPE,False,,634912,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,,luna,non-diabetic,,age rule: bare number read as years,aged,75,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771966,,,train,sda-all,samples/GSE333737/GSM9771966,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9771967,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERSCOPE,False,,426366,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,,luna,non-diabetic,,age rule: bare number read as years,adult,41,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771967,,,train,sda-all,samples/GSE333737/GSM9771967,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9771968,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,649019,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,,luna,non-diabetic,,age rule: bare number read as years,adult,46,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771968,,,train,sda-all,samples/GSE333737/GSM9771968,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771969,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,aged,male,MERFISH/MERSCOPE,MERSCOPE,False,,502612,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,,luna,non-diabetic,,age rule: bare number read as years,aged,70,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771969,,,train,sda-all,samples/GSE333737/GSM9771969,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771970,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,adult,male,MERFISH/MERSCOPE,MERSCOPE,False,,407956,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,,luna,non-diabetic,,age rule: bare number read as years,adult,46,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771970,,,train,sda-all,samples/GSE333737/GSM9771970,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771971,pancreas,normal,,pancreas,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERSCOPE,False,,102744,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,,luna,non-diabetic,,age rule: bare number read as years,adult,48,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771971,,,train,sda-all,samples/GSE333737/GSM9771971,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771972,pancreas,disease,diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,aged,female,MERFISH/MERSCOPE,MERSCOPE,False,,2686,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,MONDO:0005015,luna,type 2 diabetic,,age rule: bare number read as years,aged,74,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,278,counts,unstated,,unresolved,,,,,units_unstated,near_duplicate_observations,VERIFIED,,,,,,GSM9771972,,,train,sda-all,samples/GSE333737/GSM9771972,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771973,pancreas,disease,diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,aged,male,MERFISH/MERSCOPE,MERSCOPE,False,,269536,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,MONDO:0005015,luna,type 2 diabetic,,age rule: bare number read as years,aged,69,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771973,,,train,sda-all,samples/GSE333737/GSM9771973,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771974,pancreas,disease,diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,aged,male,MERFISH/MERSCOPE,MERSCOPE,False,,207477,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,MONDO:0005015,luna,type 2 diabetic,,age rule: bare number read as years,aged,71,extracted field,Male,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771974,,,train,sda-all,samples/GSE333737/GSM9771974,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771975,pancreas,disease,diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,aged,female,MERFISH/MERSCOPE,MERSCOPE,False,,514236,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,MONDO:0005015,luna,type 2 diabetic,,age rule: bare number read as years,aged,69,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771975,,,train,sda-all,samples/GSE333737/GSM9771975,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9771976,pancreas,disease,diabetes mellitus,pancreas,primary tissue,Homo sapiens,human,adult,female,MERFISH/MERSCOPE,MERSCOPE,False,,217547,MERFISH spatial transcriptomic profiling of extracellular matrix and vascular-associated populations in the adult human pancreas,GSE333737,GSE333737,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001264,pancreas,MONDO:0005015,luna,type 2 diabetic,,age rule: bare number read as years,adult,58,extracted field,Female,,,FFPE,FFPE,release v3,imaging-based,MERSCOPE,,,cell,300,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9771976,,,train,sda-all,samples/GSE333737/GSM9771976,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9775942,liver,disease,hepatocellular carcinoma,liver,tumour tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,2498,Spatial Glyco-Codes Define Human Liver Pathology and Progression,GSE333851,GSE333851,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver,MONDO:0007256,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,GEO series text (assay_final.csv),sequencing-based,other,,,other,89292,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,42465518,,GSM9775942,,,train,sda-all,samples/GSE333851/GSM9775942,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779857,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3698,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.018676815297874,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779857,,,train,sda-all,samples/GSE334067/GSM9779857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.16, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779858,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3695,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.976169419837443,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779858,,,train,sda-all,samples/GSE334067/GSM9779858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.07, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779859,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3483,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.015891289672782,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779859,,,train,sda-all,samples/GSE334067/GSM9779859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779860,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4501,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.035142484072326,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779860,,,train,sda-all,samples/GSE334067/GSM9779860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779861,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3973,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.036074575308314,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779861,,,train,sda-all,samples/GSE334067/GSM9779861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.84, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9779862,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2429,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.062490337083031,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779862,,,train,sda-all,samples/GSE334067/GSM9779862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.23, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779863,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1808,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.974085452932125,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779863,,,train,sda-all,samples/GSE334067/GSM9779863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.15, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779864,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4083,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,DSS+ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.015424221763897,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779864,,,train,sda-all,samples/GSE334067/GSM9779864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779865,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3208,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,DSS+ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.019654833404229,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779865,,,train,sda-all,samples/GSE334067/GSM9779865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779866,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3356,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,DSS+ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.037287126870245,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779866,,,train,sda-all,samples/GSE334067/GSM9779866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779867,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2308,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,DSS+ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.971440141613673,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779867,,,train,sda-all,samples/GSE334067/GSM9779867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779868,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2576,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,DSS+ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.015796822161719,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779868,,,train,sda-all,samples/GSE334067/GSM9779868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779869,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3844,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,DSS+ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.715637147472562,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779869,,,train,sda-all,samples/GSE334067/GSM9779869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9779870,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4773,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.032808379516701,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779870,,,train,sda-all,samples/GSE334067/GSM9779870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779871,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7235,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,8.026957453758472,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779871,,,train,sda-all,samples/GSE334067/GSM9779871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779872,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4953,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.974850920162445,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779872,,,train,sda-all,samples/GSE334067/GSM9779872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779873,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),7626,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.9634271962971415,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779873,,,train,sda-all,samples/GSE334067/GSM9779873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779874,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5171,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.03156968739959,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779874,,,train,sda-all,samples/GSE334067/GSM9779874,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779875,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8024,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.9683243095217815,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779875,,,train,sda-all,samples/GSE334067/GSM9779875,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779876,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8557,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.023051130563352,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779876,,,train,sda-all,samples/GSE334067/GSM9779876,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.13, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779877,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),6531,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.971961900399629,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779877,,,train,sda-all,samples/GSE334067/GSM9779877,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.21, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779878,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),5855,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.0330895461731355,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779878,,,train,sda-all,samples/GSE334067/GSM9779878,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.35000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779879,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7148,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.028094575486524,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779879,,,train,sda-all,samples/GSE334067/GSM9779879,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779880,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9695,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.088065144280274,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779880,,,train,sda-all,samples/GSE334067/GSM9779880,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779881,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10078,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.0181119307671445,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779881,,,train,sda-all,samples/GSE334067/GSM9779881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.2, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779882,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5731,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.017488493579154,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779882,,,train,sda-all,samples/GSE334067/GSM9779882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779883,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7147,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.019405141497354,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779883,,,train,sda-all,samples/GSE334067/GSM9779883,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779884,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),7620,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.0271650582488405,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779884,,,train,sda-all,samples/GSE334067/GSM9779884,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.15, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779885,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9138,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.063406526494643,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779885,,,train,sda-all,samples/GSE334067/GSM9779885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.19, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779886,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,fluorescence: magenta (heuristic),3809,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.066281470503457,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779886,,,train,sda-all,samples/GSE334067/GSM9779886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779887,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5806,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,mondo_predicate (Luna: perturbation),,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.032758504654986,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779887,,,train,sda-all,samples/GSE334067/GSM9779887,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.99, ""disease_status"": 0.25, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9779888,colon,disease,colitis,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4469,Paired mutation calling and spatial transcriptomics identify cellular neighborhoods associated with neoplastic outcomes in mouse colitis,GSE334067,GSE334067,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001155,Colon,MONDO:0005292,luna,,ENU,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.065070088416563,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42521760,,GSM9779888,,,train,sda-all,samples/GSE334067/GSM9779888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9785209,liver,disease,liver disorder,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),212200,Mapping vascular plasticity in liver fibrogenesis identifies novel fibrosis-associated endothelial cells in early-stage liver disease,GSE334308,GSE334308,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005154,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,0.5000095142866608,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785209,,,train,sda-all,samples/GSE334308/GSM9785209,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.44, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9785210,liver,disease,liver disorder,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),141677,Mapping vascular plasticity in liver fibrogenesis identifies novel fibrosis-associated endothelial cells in early-stage liver disease,GSE334308,GSE334308,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver biopsy,MONDO:0005154,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,0.4999956006760627,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785210,,,train,sda-all,samples/GSE334308/GSM9785210,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9785428,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4992,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,GSE334323,GSE334323,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Normal/Benign,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18408,counts,um,1.0,verified,7.293785982138234,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785428,,,train,sda-all,samples/GSE334323/GSM9785428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9785429,colon,disease,adenocarcinoma;colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4682,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,GSE334323,GSE334323,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,"Colorectal Cancer, Adenocarcinoma",MONDO:0004970;MONDO:0024331,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18408,counts,um,1.0,verified,8.479695882761236,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785429,,,train,sda-all,samples/GSE334323/GSM9785429,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 0.99}",,
GSM9785430,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3689,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,GSE334323,GSE334323,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Normal/Benign,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18408,counts,um,1.0,verified,8.04481860338564,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785430,,,train,sda-all,samples/GSE334323/GSM9785430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9785431,colon,disease,adenocarcinoma;colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3909,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,GSE334323,GSE334323,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,"Colorectal Cancer, Adenocarcinoma",MONDO:0004970;MONDO:0024331,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18408,counts,um,1.0,verified,10.35009512279665,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785431,,,train,sda-all,samples/GSE334323/GSM9785431,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 0.98}",,
GSM9785432,colon,normal,,colon,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3565,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,GSE334323,GSE334323,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,Colon Normal/Benign,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18408,counts,um,1.0,verified,13.3485423472719,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785432,,,train,sda-all,samples/GSE334323/GSM9785432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9785433,colon,disease,adenocarcinoma;colorectal carcinoma,colon,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: red (heuristic),4898,Custom Probe-Based Spatial Transcriptomics Enables Microbiome Detection in FFPE Colorectal Cancer Tissue,GSE334323,GSE334323,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001155,"Colorectal Cancer, Adenocarcinoma",MONDO:0004970;MONDO:0024331,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18408,counts,um,1.0,verified,12.054013948222906,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9785433,,,train,sda-all,samples/GSE334323/GSM9785433,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9786073,ovary,disease,ovarian dysfunction,ovary,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,544026,Spatial Transcriptomic Atlas Reveals that FOXO3-Mediated Mitochondrial Dynamics Imbalance Drives Premature Ovarian Insufficiency in Mice,GSE334364,GSE334364,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000992,ovary,MONDO:0001889,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000048249241797,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42435003,,GSM9786073,,,test,sda-all,samples/GSE334364/GSM9786073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.17, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9788638,other,perturbation,,forelimb zeugopod,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1134,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],GSE334433,GSE334433,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002386,Regenerating limb amputated in dyaphisis region,,luna,,Lower arm amputation in the diaphysis region of the radius and ulna,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,139698,counts,um,1.0,verified,4.104547224689206,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788638,,,train,sda-all,samples/GSE334433/GSM9788638,sda-tissue-disease-2.4,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.92, ""life_stage"": 0.63}",organ,low_confidence_annotation
GSM9788639,other,perturbation,,forelimb zeugopod,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),886,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],GSE334433,GSE334433,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002386,Regenerating limb amputated in dyaphisis region,,luna,,Lower arm amputation in the diaphysis region of the radius and ulna,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,139698,counts,um,1.0,verified,4.1062082628043,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788639,,,train,sda-all,samples/GSE334433/GSM9788639,sda-tissue-disease-2.4,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.67, ""life_stage"": 0.8200000000000001}",,
GSM9788640,other,perturbation,,epiphysis,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1243,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],GSE334433,GSE334433,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0001437,Regenerating limb amputated in epiphysis region,,luna,,Lower arm amputation in the epiphysis region of the radius and ulna,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,139698,counts,um,1.0,verified,4.104711871206297,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788640,,,train,sda-all,samples/GSE334433/GSM9788640,sda-tissue-disease-2.4,"{""organ"": 0.5700000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.34, ""life_stage"": 0.91}",organ;uberon,low_confidence_annotation
GSM9788641,other,perturbation,,forelimb zeugopod,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1369,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],GSE334433,GSE334433,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002386,Regenerating limb amputated in epiphysis region,,luna,,Lower arm amputation in the epiphysis region of the radius and ulna,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,139698,counts,um,1.0,verified,4.106416764096489,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788641,,,train,sda-all,samples/GSE334433/GSM9788641,sda-tissue-disease-2.4,"{""organ"": 0.54, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.55, ""life_stage"": 0.72}",organ;uberon,low_confidence_annotation
GSM9788642,other,perturbation,,forelimb zeugopod,primary tissue,Ambystoma mexicanum,axolotl,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1103,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],GSE334433,GSE334433,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002386,Regenerating limb amputated in dyaphisis region,,luna,,Lower arm amputation in the diaphysis region of the radius and ulna,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,139698,counts,um,1.0,verified,4.521269363793237,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788642,,,train,sda-all,samples/GSE334433/GSM9788642,sda-tissue-disease-2.4,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.79, ""life_stage"": 0.86}",,
GSM9788644,other,perturbation,,forelimb zeugopod,primary tissue,Ambystoma mexicanum,axolotl,adult,unknown,Visium,Visium,True,H&E-like (heuristic),1374,Tissue composition shapes differential skeletal integration strategies during axolotl limb regeneration [Spatial Transcriptomics],GSE334433,GSE334433,8296,Ambystoma mexicanum,8296,,False,False,GEO organism field,Ambystoma mexicanum,,luna,UBERON:0002386,Regenerating limb amputated in epiphysis region,,luna,,Lower arm amputation in the epiphysis region of the radius and ulna,luna,adult,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,139698,counts,um,1.0,verified,4.523786486041112,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9788644,,,train,sda-all,samples/GSE334433/GSM9788644,sda-tissue-disease-2.4,"{""organ"": 0.47000000000000003, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.32, ""life_stage"": 0.73}",organ;uberon,low_confidence_annotation
GSM9802211,kidney,disease,,kidney,primary tissue,Homo sapiens,human,adult,male,Visium HD,Visium HD,True,H&E-like (heuristic),205569,Matched single-cell and Visium HD spatial transcriptomics of a chronic antibody-mediated rejection kidney graft,GSE334924,GSE334924,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Renal biopsy tissue,,luna,CAMR,,age rule: bare number read as years,adult,40,extracted field,M,GSE334924:CAMR-ZLD,CAMR-ZLD,,,release v3,sequencing-based,Visium HD,,,bin,18132,counts,um,1.0,verified,2.0909659348816305,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802211,,,train,sda-all,samples/GSE334924/GSM9802211,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9802652,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,7474,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,mondo_predicate,,,luna,adult,25.9,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.638208571249358,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802652,,,test,sda-all,samples/GSE334959/GSM9802652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.88, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9802653,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,7236,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,mondo_predicate,,,luna,adult,25,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.667530106842719,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802653,,,test,sda-all,samples/GSE334959/GSM9802653,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM9802654,brain,normal,,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,7082,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,,luna,,,luna,adult,29,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.6405082483668005,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802654,,,test,sda-all,samples/GSE334959/GSM9802654,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9802655,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,7119,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,mondo_predicate (Luna: perturbation),,,luna,adult,25.9,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.6663695492187705,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802655,,,test,sda-all,samples/GSE334959/GSM9802655,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 0.91, ""life_stage"": 0.77}",disease_status,low_confidence_annotation
GSM9802656,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,7402,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,luna,,,luna,adult,25.7,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.639851243519577,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802656,,,test,sda-all,samples/GSE334959/GSM9802656,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.84}",disease_status,low_confidence_annotation
GSM9802657,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,7210,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,luna,,,luna,adult,29,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.666866951862361,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802657,,,test,sda-all,samples/GSE334959/GSM9802657,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.35000000000000003, ""uberon"": 0.89, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9802658,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,7882,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,mondo_predicate (Luna: perturbation),,,luna,adult,29.14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.667357369767179,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802658,,,test,sda-all,samples/GSE334959/GSM9802658,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.92, ""life_stage"": 0.9400000000000001}",disease_status,low_confidence_annotation
GSM9802659,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,6935,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,mondo_predicate (Luna: perturbation),,,luna,adult,29.14,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.640340183121012,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802659,,,test,sda-all,samples/GSE334959/GSM9802659,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.89, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9802660,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,6477,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,mondo_predicate (Luna: perturbation),,,luna,adult,24,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.666607157480876,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802660,,,test,sda-all,samples/GSE334959/GSM9802660,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.9500000000000001, ""life_stage"": 0.9500000000000001}",,
GSM9802661,brain,normal,,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3480,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,,manual,,,luna,adult,29,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.006074446876273,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802661,,,test,sda-all,samples/GSE334959/GSM9802661,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": null, ""uberon"": 0.96, ""life_stage"": 0.97}",,
GSM9802662,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3822,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,mondo_predicate,,,luna,adult,29,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.948191927901177,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802662,,,test,sda-all,samples/GSE334959/GSM9802662,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.92, ""life_stage"": 0.9400000000000001}",,
GSM9802663,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3565,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,mondo_predicate (Luna: perturbation),,,luna,adult,29.4,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.997402894255731,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802663,,,test,sda-all,samples/GSE334959/GSM9802663,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 0.99, ""life_stage"": 0.93}",disease_status,low_confidence_annotation
GSM9802664,brain,disease,pulmonary hypertension,cerebellum,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E,3481,Cerebellar and cerebral frontal lobe alterations in pulmonary hypertension: Evidence of an inflammatory lung vascular-brain axis [Spatial Transcriptomics],GSE334959,GSE334959+GSE334960,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002037,Brain,MONDO:0005149,luna,,,luna,adult,29.4,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.951419263808623,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9802664,,,test,sda-all,samples/GSE334959/GSM9802664,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.99, ""life_stage"": 0.88}",disease_status,low_confidence_annotation
GSM9805851,small intestine,disease,Yersinia pseudotuberculosis infectious disease,ileum,primary tissue,Mus musculus,house mouse,adult,female,Stereo-seq,Stereo-seq,False,,34961,Spatial transcriptomic analysis of Yersinia pseudotuberculosis infected ileum reveals novel enterocyte transcriptional state and bacterial localization,GSE335102,GSE335102,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002116,ileum,MONDO:0007024,luna,,C57BL6,age rule: age with unit,juvenile,7.5 weeks,extracted field,female,,,FFPE,FFPE,release v3,sequencing-based,Stereoseq,,,bin,56513,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9805851,,,train,sda-all,samples/GSE335102/GSM9805851,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9806289,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,aged,unknown,Xenium,Xenium,True,fluorescence: DAPI,228762,10x Genomics Xenium analysis of adult and aged mouse brain control and heat stress cohorts,GSE335126,GSE335126,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,"control and periodic heat exposure (~40 deg C, 3 hours/day for 14-15 days)",luna,aged,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.50001148286032,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9806289,,,train,sda-all,samples/GSE335126/GSM9806289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.99, ""life_stage"": 0.5700000000000001}",disease_status;life_stage,low_confidence_annotation
GSM9806290,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,unknown,Xenium,Xenium,False,,211018,10x Genomics Xenium analysis of adult and aged mouse brain control and heat stress cohorts,GSE335126,GSE335126,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,"control and periodic heat exposure (~40 deg C, 3 hours/day for 14-15 days)",luna,aged,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9806290,,,train,sda-all,samples/GSE335126/GSM9806290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9807708,other,disease,ovarian cancer,,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4674,Spatial transcriptomic analysis of patient- and cell line-derived high grade serous ovarian cancer spheroids,GSE335181,GSE335181,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,,MONDO:0008170,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18132,counts,um,1.0,verified,3.4197314326207064,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9807708,,,train,sda-all,samples/GSE335181/GSM9807708,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.99, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9807709,peritoneum,disease,ovarian cancer,ascitic fluid,organoid,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4963,Spatial transcriptomic analysis of patient- and cell line-derived high grade serous ovarian cancer spheroids,GSE335181,GSE335181,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007795,"Ascites Derived Patient High Grade Serous Ovarian Cancer (ID's 526, 530, 498) microarray",MONDO:0008170,luna,,,rule: culture or organoid (culture time is not a life stage),not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18132,counts,um,1.0,verified,3.025470642610841,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9807709,,,train,sda-all,samples/GSE335181/GSM9807709,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 0.76, ""disease_status"": 0.99, ""uberon"": 0.52, ""life_stage"": 0.99}",organ;uberon,low_confidence_annotation
GSM9808287,lung,disease,lung cancer,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,371513,The H3K36M oncohistone inhibits NSD2 to activate a SETD2-dependent antiviral-like immune response in KRAS-driven lung cancer,GSE335211,GSE335211,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0008903,luna,,Kras (LSL-G12D) control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000079083122445,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9808287,,,train,sda-all,samples/GSE335211/GSM9808287,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9808288,lung,disease,lung cancer,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,306612,The H3K36M oncohistone inhibits NSD2 to activate a SETD2-dependent antiviral-like immune response in KRAS-driven lung cancer,GSE335211,GSE335211,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0008903,luna,,Kras (LSL-G12D) + H3K36M,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.4999890799576992,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9808288,,,train,sda-all,samples/GSE335211/GSM9808288,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9808289,lung,disease,lung cancer,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,179948,The H3K36M oncohistone inhibits NSD2 to activate a SETD2-dependent antiviral-like immune response in KRAS-driven lung cancer,GSE335211,GSE335211,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0008903,luna,,Kras (LSL-G12D) + Setd2 KO,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.49999353169469596,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9808289,,,train,sda-all,samples/GSE335211/GSM9808289,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9808290,lung,disease,lung cancer,lung,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,485208,The H3K36M oncohistone inhibits NSD2 to activate a SETD2-dependent antiviral-like immune response in KRAS-driven lung cancer,GSE335211,GSE335211,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0008903,luna,,Kras (LSL-G12D) + H3K36M + Setd2 KO,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.49998770576664253,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9808290,,,train,sda-all,samples/GSE335211/GSM9808290,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9809293,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,female,Xenium,Xenium,True,fluorescence: DAPI,52234,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],GSE335275,GSE335275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor,MONDO:0850335;MONDO:0021211,luna,Glioblastoma,,age rule: bare number read as years,aged,66,extracted field,female,GSE335275:B189,B189,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000034495446601,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809293,,,test,sda-all,samples/GSE335275/GSM9809293,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9809294,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,female,Xenium,Xenium,True,fluorescence: DAPI,185662,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],GSE335275,GSE335275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor,MONDO:0850335;MONDO:0021211,luna,Glioblastoma,,age rule: bare number read as years,aged,66,extracted field,female,GSE335275:B189,B189,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999574001947417,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809294,,,test,sda-all,samples/GSE335275/GSM9809294,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9809295,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,56669,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],GSE335275,GSE335275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor,MONDO:0850335;MONDO:0021211,luna,Glioblastoma,,age rule: bare number read as years,aged,71,extracted field,Male,GSE335275:WU1220,WU1220,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103528242504,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809295,,,test,sda-all,samples/GSE335275/GSM9809295,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9809296,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,296613,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],GSE335275,GSE335275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor,MONDO:0850335;MONDO:0021211,luna,Glioblastoma,,age rule: bare number read as years,aged,71,extracted field,Male,GSE335275:WU1220,WU1220,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000015904319612,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809296,,,test,sda-all,samples/GSE335275/GSM9809296,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9809297,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,female,Xenium,Xenium,True,fluorescence: DAPI,20859,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],GSE335275,GSE335275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor,MONDO:0850335;MONDO:0021211,luna,Glioblastoma,,age rule: bare number read as years,aged,68,extracted field,female,GSE335275:WU1221,WU1221,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999173143707626,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809297,,,test,sda-all,samples/GSE335275/GSM9809297,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9809298,brain,disease,IDH-wildtype glioblastoma;brain neoplasm,brain,tumour tissue,Homo sapiens,human,aged,female,Xenium,Xenium,True,fluorescence: DAPI,103688,Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions [xenium_cohort3],GSE335275,GSE335275,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Brain tumor,MONDO:0850335;MONDO:0021211,luna,Glioblastoma,,age rule: bare number read as years,aged,68,extracted field,female,GSE335275:WU1221,WU1221,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998871841155235,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9809298,,,test,sda-all,samples/GSE335275/GSM9809298,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9812268,bone,perturbation,,thoracic region of vertebral column,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,False,,1916,"10X Visium spatial transcriptomics of mouse thoracic spine intervertebral disc, IVD2 (area D1)",GSE335345,GSE335345,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0006073,Thoracic Spine,,luna,,Adgrg6-cKO and Wildtype,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9812268,,,train,sda-all,samples/GSE335345/GSM9812268,sda-tissue-disease-2.3,"{""organ"": 0.79, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9815146,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1152,Epigenetic reprogramming of CD4⁺ T cell fate by maternal and early-life obesity impairs vaccine responses in the offspring [Spatial Transcriptomics],GSE335533,GSE335533,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000029,draining lymph node,,luna,,NP-OVA + Alum,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.687298315398718,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9815146,,,train,sda-all,samples/GSE335533/GSM9815146,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9815147,lymph node,perturbation,,lymph node,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2758,Epigenetic reprogramming of CD4⁺ T cell fate by maternal and early-life obesity impairs vaccine responses in the offspring [Spatial Transcriptomics],GSE335533,GSE335533,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000029,draining lymph node,,luna,,NP-OVA + Alum,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.701480240620542,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9815147,,,train,sda-all,samples/GSE335533/GSM9815147,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.45, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9815454,liver,disease,neoplasm,liver,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,80036,An Integrated Spatial Multi-Omics Workflow for Sequential RNA and Protein Profiling in FFPE Tumor Tissue,GSE335552,GSE335552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver,MONDO:0005070,luna,,CRLM tumor,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000061968107081,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9815454,,,train,sda-all,samples/GSE335552/GSM9815454,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.99, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9815455,liver,disease,neoplasm,liver,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,166860,An Integrated Spatial Multi-Omics Workflow for Sequential RNA and Protein Profiling in FFPE Tumor Tissue,GSE335552,GSE335552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver,MONDO:0005070,luna,,CRLM tumor,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000110809053838,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9815455,,,train,sda-all,samples/GSE335552/GSM9815455,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9815456,liver,disease,neoplasm,liver,metastasis,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,213319,An Integrated Spatial Multi-Omics Workflow for Sequential RNA and Protein Profiling in FFPE Tumor Tissue,GSE335552,GSE335552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver,MONDO:0005070,luna,,CRLM tumor,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999912459413001,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9815456,,,train,sda-all,samples/GSE335552/GSM9815456,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9815457,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,186496,An Integrated Spatial Multi-Omics Workflow for Sequential RNA and Protein Profiling in FFPE Tumor Tissue,GSE335552,GSE335552,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,Liver,,luna,,matched adjacent normal liver sample,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9815457,,,train,sda-all,samples/GSE335552/GSM9815457,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9815713,brain,normal,,brain,primary tissue,Astyanax mexicanus,Mexican tetra,not stated,female,Other,not named in GEO,False,,784963,A comparative brain cell atlas of Astyanax mexicanus,GSE335564,GSE335564,7994,Astyanax mexicanus,7994,,False,False,GEO organism field,Astyanax mexicanus,,luna,UBERON:0000955,Whole brain,,luna,,Rio Choy surface,luna,not stated,,extracted field,female,,,,,release v3,sequencing-based,other,,,other,27540,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,42395481,,GSM9815713,,,train,sda-all,samples/GSE335564/GSM9815713,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9812615,lung,disease,neoplasm,lung,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,10000,CAR-T-drug conjugate against solid tumor,GSE335592,GSE335592,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0005070,mondo_predicate (Luna: perturbation),,CAR-T,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,39763,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM9812615,,,val,sda-all,samples/GSE335592/GSM9812615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9812616,lung,disease,neoplasm,lung,primary tissue,Homo sapiens,human,not stated,unknown,DBiT-seq,DBiT-seq,False,,10000,CAR-T-drug conjugate against solid tumor,GSE335592,GSE335592,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002048,Lung,MONDO:0005070,mondo_predicate (Luna: perturbation),,CAR-T-D-C,luna,not stated,,not stated,,,,,,GEO series text (assay_final.csv),sequencing-based,other,,,spot,44148,unknown,native_grid,,unresolved,,,,,,,VERIFIED,,,,,,GSM9812616,,,val,sda-all,samples/GSE335592/GSM9812616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.8200000000000001, ""disease_status"": 0.68, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9816491,skin,disease,atopic eczema;prurigo,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,45280,Initial OX40–OX40L Signaling Promotes a Skin-Resident Memory T-Cell Reservoir in Atopic Dermatitis,GSE335624,GSE335624,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0004980;MONDO:0021739,luna,,Pretreatment atopic dermatitis lesional skin specimen containing an erythematous lesion and a prurigo nodule,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000048294513743,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42638514,,GSM9816491,,,train,sda-all,samples/GSE335624/GSM9816491,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.51, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9817881,brain,disease,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2373,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,GSE335702,GSE335702,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0000914,mondo_predicate,,"transgenic, TgNotch3^WT",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,16.366801504538284,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817881,,,train,sda-all,samples/GSE335702/GSM9817881,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.24, ""uberon"": 0.99, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9817882,brain,disease,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2077,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,GSE335702,GSE335702,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0000914,luna,,"transgenic, TgNotch3^R169C",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,11.906500471350352,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817882,,,train,sda-all,samples/GSE335702/GSM9817882,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9817883,blood vessel,disease,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",blood vessel,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),831,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,GSE335702,GSE335702,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001981,cerebral vessels,MONDO:0000914,mondo_predicate (Luna: perturbation),,"transgenic, TgNotch3^WT",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,11.929727585747997,VERIFIED,ABSENT,ABSENT,,zero_count_observations,VERIFIED,PASS,,,42547848,,GSM9817883,,,train,sda-all,samples/GSE335702/GSM9817883,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 0.28, ""uberon"": 0.76, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9817884,blood vessel,disease,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",blood vessel,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),632,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,GSE335702,GSE335702,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001981,cerebral vessels,MONDO:0000914,luna,,"transgenic, TgNotch3^R169C",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,11.931448950616248,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817884,,,train,sda-all,samples/GSE335702/GSM9817884,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.56, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9817885,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),384475,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,GSE335702,GSE335702,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,"transgenic, TgNotch3^WT",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,0.8957524246479206,FAILED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42547848,,GSM9817885,,,train,sda-all,samples/GSE335702/GSM9817885,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9817886,brain,disease,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),217363,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,GSE335702,GSE335702,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0000914,mondo_predicate (Luna: perturbation),,"transgenic, TgNotch3^WT (line Tg129/213)",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,0.8961549734485088,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817886,,,train,sda-all,samples/GSE335702/GSM9817886,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.33, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9817887,brain,disease,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),346469,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,GSE335702,GSE335702,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0000914,luna,,"transgenic, TgNotch3^R169C (line Tg88/148)",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,1.1914155254906087,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817887,,,train,sda-all,samples/GSE335702/GSM9817887,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9817888,brain,disease,"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1",brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),267238,Pericyte KATP Channel Hyperactivity Redistributes Cortical Blood Flow in a CADASIL Mouse Model,GSE335702,GSE335702,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,MONDO:0000914,luna,,"transgenic, TgNotch3^R169C (line Tg88)",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,1.0935744355932078,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42547848,,GSM9817888,,,train,sda-all,samples/GSE335702/GSM9817888,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9820697,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3600,Resident tissue macrophages transfer selenium transporter protein to protect pancreatic cancer from ferroptosis,GSE335777,GSE335777,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,PDAC,MONDO:0005184,luna,,tamoxifen,luna,not stated,,not stated,,,,,,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.242247094208409,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9820697,,,train,sda-all,samples/GSE335777/GSM9820697,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9822859,brain,normal,,middle temporal gyrus,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,197723,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,Middle Temporal Gyrus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999187063970674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822859,,,train,sda-all,samples/GSE335898/GSM9822859,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9822860,brain,normal,,middle temporal gyrus,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,188921,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,Middle Temporal Gyrus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000051805120649,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822860,,,train,sda-all,samples/GSE335898/GSM9822860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9822861,brain,normal,,middle temporal gyrus,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,145605,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,Middle Temporal Gyrus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998906285977435,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822861,,,train,sda-all,samples/GSE335898/GSM9822861,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822862,brain,normal,,middle temporal gyrus,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,158042,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002771,Middle Temporal Gyrus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000054808535515,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822862,,,train,sda-all,samples/GSE335898/GSM9822862,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822863,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,33445,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999922472606988,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822863,,,train,sda-all,samples/GSE335898/GSM9822863,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822864,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,29499,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000120606478291,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822864,,,train,sda-all,samples/GSE335898/GSM9822864,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822865,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,22698,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000163657662624,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822865,,,train,sda-all,samples/GSE335898/GSM9822865,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.91, ""life_stage"": 1.0}",,
GSM9822866,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,26091,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999827705031013,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822866,,,train,sda-all,samples/GSE335898/GSM9822866,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9822867,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,29783,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999888648511071,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822867,,,train,sda-all,samples/GSE335898/GSM9822867,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822868,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,29037,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000163657662624,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822868,,,train,sda-all,samples/GSE335898/GSM9822868,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822869,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,124626,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999945244816509,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822869,,,train,sda-all,samples/GSE335898/GSM9822869,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9822870,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,30958,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822870,,,train,sda-all,samples/GSE335898/GSM9822870,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9822871,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,12719,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000183486238532,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822871,,,train,sda-all,samples/GSE335898/GSM9822871,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9822872,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,45812,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000007950642411,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822872,,,train,sda-all,samples/GSE335898/GSM9822872,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9822873,brain,normal,,hippocampal formation,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,110328,Spatial atlas of the human brain vasculature reveals specialized cell ensembles,GSE335898,GSE335898,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002421,Hippocampus,,luna,,Control,luna,not stated,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998965973639226,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9822873,,,train,sda-all,samples/GSE335898/GSM9822873,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9824312,bone marrow,disease,clonal hematopoiesis,bone marrow,primary tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,False,,61583,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],GSE335962,GSE335962,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow biopsy,MONDO:0100542,luna,,CHIP,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,9692,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824312,,,train,sda-all,samples/GSE335962/GSM9824312,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9824313,bone marrow,disease,clonal hematopoiesis,bone marrow,primary tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,False,,40264,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],GSE335962,GSE335962,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow biopsy,MONDO:0100542,luna,,CHIP,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,9692,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824313,,,train,sda-all,samples/GSE335962/GSM9824313,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9824314,bone marrow,disease,,bone marrow,primary tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,False,,23992,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],GSE335962,GSE335962,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow biopsy,,luna,,Non-CHIP,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,9692,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824314,,,train,sda-all,samples/GSE335962/GSM9824314,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.25, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9824315,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,male,Xenium,Xenium,False,,51464,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],GSE335962,GSE335962,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow biopsy,,luna,,Non-CHIP,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,9692,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824315,,,train,sda-all,samples/GSE335962/GSM9824315,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9824316,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,35084,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],GSE335962,GSE335962,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow biopsy,,luna,,Non-CHIP,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,9692,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824316,,,train,sda-all,samples/GSE335962/GSM9824316,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9824317,bone marrow,normal,,bone marrow,primary tissue,Homo sapiens,human,not stated,female,Xenium,Xenium,False,,69901,Clonal Hematopoiesis Drives Fibrotic Remodeling of the Bone Marrow Microenvironment [dataset 2],GSE335962,GSE335962,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow biopsy,,luna,,Non-CHIP,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,9692,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9824317,,,train,sda-all,samples/GSE335962/GSM9824317,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.4, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829813,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,83912,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,GSE336196,GSE336196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"Spinal cord (from thoracic, lumbar, and sacral parts)",,luna,,RT/saline,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.500005977741066,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829813,,,train,sda-all,samples/GSE336196/GSM9829813,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829814,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,172130,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,GSE336196,GSE336196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"Spinal cord (from thoracic, lumbar, and sacral parts)",,luna,,RT/saline,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.5000097690170198,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829814,,,train,sda-all,samples/GSE336196/GSM9829814,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.47000000000000003, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829815,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,173341,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,GSE336196,GSE336196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"Spinal cord (from thoracic, lumbar, and sacral parts)",,luna,,RT/saline,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.5000016273922666,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829815,,,train,sda-all,samples/GSE336196/GSM9829815,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9829816,spinal cord,perturbation,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,167694,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,GSE336196,GSE336196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"Spinal cord (from thoracic, lumbar, and sacral parts)",,luna,,Cold,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.5000103207022423,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829816,,,train,sda-all,samples/GSE336196/GSM9829816,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829817,spinal cord,perturbation,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,152358,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,GSE336196,GSE336196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"Spinal cord (from thoracic, lumbar, and sacral parts)",,luna,,Cold,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.5000048932190857,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829817,,,train,sda-all,samples/GSE336196/GSM9829817,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.52, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829818,spinal cord,perturbation,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,78138,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,GSE336196,GSE336196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"Spinal cord (from thoracic, lumbar, and sacral parts)",,luna,,Cold,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.5000028674986235,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829818,,,train,sda-all,samples/GSE336196/GSM9829818,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829819,spinal cord,normal,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,598230,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,GSE336196,GSE336196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"Spinal cord (from thoracic, lumbar, and sacral parts)",,luna,,RT/saline,luna,not stated,,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.3.1.1,cell,541,counts,um,1.0,verified,0.5000064836827317,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829819,,,train,sda-all,samples/GSE336196/GSM9829819,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.68, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9829820,spinal cord,perturbation,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,556964,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,GSE336196,GSE336196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"Spinal cord (from thoracic, lumbar, and sacral parts)",,luna,,Cold,luna,not stated,,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.3.1.1,cell,541,counts,um,1.0,verified,0.4999913610643169,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829820,,,train,sda-all,samples/GSE336196/GSM9829820,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9829821,spinal cord,perturbation,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,591992,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,GSE336196,GSE336196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"Spinal cord (from thoracic, lumbar, and sacral parts)",,luna,,2-DG,luna,not stated,,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.3.1.1,cell,541,counts,um,1.0,verified,0.49999082232011743,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829821,,,train,sda-all,samples/GSE336196/GSM9829821,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9829822,spinal cord,perturbation,,spinal cord,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,618208,Spatial Transcriptomic Activity Atlas of Spinal Sympathetic Neurons Delineates Neural Control of Lipolysis,GSE336196,GSE336196,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002240,"Spinal cord (from thoracic, lumbar, and sacral parts)",,luna,,2-DG,luna,not stated,,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,mSpinal Cord_100g,xenium-3.3.1.1,cell,541,counts,um,1.0,verified,0.5000102676062427,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9829822,,,train,sda-all,samples/GSE336196/GSM9829822,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9830047,lung,disease,tuberculosis,lung,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,398650,The lung environment in pulmonary Mycobacterium tuberculosis infection influences local monocyte differentiation,GSE336209,GSE336209,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0018076,luna,,,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999976998803938,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42427735,,GSM9830047,,,train,sda-all,samples/GSE336209/GSM9830047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9830048,lung,disease,tuberculosis,lung,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,True,fluorescence: DAPI,361007,The lung environment in pulmonary Mycobacterium tuberculosis infection influences local monocyte differentiation,GSE336209,GSE336209,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0018076,luna,,,luna,not stated,,extracted field,male,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999137415466705,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42427735,,GSM9830048,,,train,sda-all,samples/GSE336209/GSM9830048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9830049,lung,disease,tuberculosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,312610,The lung environment in pulmonary Mycobacterium tuberculosis infection influences local monocyte differentiation,GSE336209,GSE336209,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0018076,luna,,,luna,not stated,,extracted field,female,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999890714154243,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42427735,,GSM9830049,,,train,sda-all,samples/GSE336209/GSM9830049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9830050,lung,disease,tuberculosis,lung,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,True,fluorescence: DAPI,302232,The lung environment in pulmonary Mycobacterium tuberculosis infection influences local monocyte differentiation,GSE336209,GSE336209,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,lung,MONDO:0018076,luna,,,luna,not stated,,extracted field,female,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000012177301509,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42427735,,GSM9830050,,,train,sda-all,samples/GSE336209/GSM9830050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9837325,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,27886,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,GSE336556,GSE336556,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000222969264545,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837325,,,train,sda-all,samples/GSE336556/GSM9837325,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9837326,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,3900,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,GSE336556,GSE336556,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000253344142683,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837326,,,train,sda-all,samples/GSE336556/GSM9837326,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9837327,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,13110,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,GSE336556,GSE336556,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000025635767023,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837327,,,train,sda-all,samples/GSE336556/GSM9837327,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9837328,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,74724,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,GSE336556,GSE336556,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999943659855769,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837328,,,train,sda-all,samples/GSE336556/GSM9837328,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9837329,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,83604,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,GSE336556,GSE336556,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999793255536157,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837329,,,train,sda-all,samples/GSE336556/GSM9837329,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9837330,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,20345,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,GSE336556,GSE336556,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999931394072447,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837330,,,train,sda-all,samples/GSE336556/GSM9837330,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9837331,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,60123,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,GSE336556,GSE336556,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999725010312113,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837331,,,train,sda-all,samples/GSE336556/GSM9837331,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.93, ""disease_status"": 0.65, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9837332,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,37429,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,GSE336556,GSE336556,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000087434821315,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837332,,,train,sda-all,samples/GSE336556/GSM9837332,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9837333,lung,disease,,lung,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,47611,Spatial transcriptomics reveals differences in bronchus-associated lymphoid tissue composition in stable and rejecting human lung allografts,GSE336556,GSE336556,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998049921996873,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9837333,,,train,sda-all,samples/GSE336556/GSM9837333,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9839078,liver,normal,,liver,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,689749,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002107,liver,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy0861,cy0861,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18129,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9839078,,,val,sda-all,samples/GSE336633/GSM9839078,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839079,lung,normal,,lung,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,489441,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002048,lung,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy0861,cy0861,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18129,counts,um,1.0,verified,,,,,,zero_count_observations,VERIFIED,,,,,,GSM9839079,,,val,sda-all,samples/GSE336633/GSM9839079,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839080,kidney,normal,,kidney,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,655234,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy0861,cy0861,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18129,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839080,,,val,sda-all,samples/GSE336633/GSM9839080,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.97}",,feature_species_differs
GSM9839081,heart,normal,,heart,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,589611,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0000948,heart,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy0861,cy0861,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18129,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839081,,,val,sda-all,samples/GSE336633/GSM9839081,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839082,liver,normal,,liver,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,684861,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002107,liver,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy0993,cy0993,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18125,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839082,,,val,sda-all,samples/GSE336633/GSM9839082,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,feature_species_differs
GSM9839083,lung,normal,,lung,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,676352,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002048,lung,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy0993,cy0993,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18125,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839083,,,val,sda-all,samples/GSE336633/GSM9839083,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839084,kidney,normal,,kidney,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,696701,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy0993,cy0993,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18125,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839084,,,val,sda-all,samples/GSE336633/GSM9839084,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,feature_species_differs
GSM9839085,heart,normal,,heart,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,655856,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0000948,heart,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy0993,cy0993,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18125,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839085,,,val,sda-all,samples/GSE336633/GSM9839085,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839086,liver,normal,,liver,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,607205,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002107,liver,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy1008,cy1008,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18163,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839086,,,val,sda-all,samples/GSE336633/GSM9839086,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839087,lung,normal,,lung,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,458803,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002048,lung,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy1008,cy1008,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18163,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839087,,,val,sda-all,samples/GSE336633/GSM9839087,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,feature_species_differs
GSM9839088,kidney,normal,,kidney,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,676349,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy1008,cy1008,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18163,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839088,,,val,sda-all,samples/GSE336633/GSM9839088,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,feature_species_differs
GSM9839089,heart,normal,,heart,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,454987,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0000948,heart,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy1008,cy1008,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18163,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839089,,,val,sda-all,samples/GSE336633/GSM9839089,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,feature_species_differs
GSM9839090,liver,normal,,liver,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,669776,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002107,liver,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy1021,cy1021,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18163,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839090,,,val,sda-all,samples/GSE336633/GSM9839090,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.97}",,feature_species_differs
GSM9839091,lung,normal,,lung,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,455147,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002048,lung,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy1021,cy1021,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18163,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839091,,,val,sda-all,samples/GSE336633/GSM9839091,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM9839092,kidney,normal,,kidney,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,629929,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002113,kidney,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy1021,cy1021,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18163,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839092,,,val,sda-all,samples/GSE336633/GSM9839092,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,feature_species_differs
GSM9839093,heart,normal,,heart,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Visium HD,Visium HD,False,,580664,Spatial Transcriptomics of MHC Expression in Mauritian Cynomolgus Macaque Tissues,GSE336633,GSE336633+GSE336978,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0000948,heart,,luna,,normal control,luna,not stated,,not stated,,GSE336633:cy1021,cy1021,FFPE,formalin-fixed paraffin-embedded,release v3,sequencing-based,VisiumHD,,,bin,18163,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9839093,,,val,sda-all,samples/GSE336633/GSM9839093,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,feature_species_differs
GSM9843765,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,175270,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,GSE336853,GSE336853,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,rectum,MONDO:0005101,luna,,PreTreatResponder,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,19244,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9843765,,,train,sda-all,samples/GSE336853/GSM9843765,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843766,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,271646,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,GSE336853,GSE336853,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,rectum,MONDO:0005101,luna,,PreTreatNonResponder,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,19244,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9843766,,,train,sda-all,samples/GSE336853/GSM9843766,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843767,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,143733,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,GSE336853,GSE336853,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,rectum,MONDO:0005101,luna,,PreTreatNonResponder,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,19244,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9843767,,,train,sda-all,samples/GSE336853/GSM9843767,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843768,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,135286,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,GSE336853,GSE336853,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,rectum,MONDO:0005101,luna,,PreTreatResponder,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,19244,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9843768,,,train,sda-all,samples/GSE336853/GSM9843768,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843769,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,182225,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,GSE336853,GSE336853,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,rectum,MONDO:0005101,luna,,PreTreatResponder,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,19244,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9843769,,,train,sda-all,samples/GSE336853/GSM9843769,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9843770,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,229735,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,GSE336853,GSE336853,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,rectum,MONDO:0005101,luna,,PreTreatResponder,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,19244,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9843770,,,train,sda-all,samples/GSE336853/GSM9843770,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843771,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,241086,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,GSE336853,GSE336853,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,rectum,MONDO:0005101,luna,,PreTreatNonResponder,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,19244,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9843771,,,train,sda-all,samples/GSE336853/GSM9843771,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9843772,rectum,disease,ulcerative colitis,rectum,primary tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,91720,New taxonomy based on individual patient-reported response trajectories defines ulcerative colitis endotypes and reveals vascular inflammation as a mechanism for vedolizumab nonresponse.,GSE336853,GSE336853,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0001052,rectum,MONDO:0005101,luna,,PreTreatNonResponder,luna,not stated,,not stated,,,,FFPE,"Formalin-fixed, paraffin-embedded",release v3,imaging-based,CosMx,,,cell,19244,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9843772,,,train,sda-all,samples/GSE336853/GSM9843772,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9844156,kidney,disease,interstitial nephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,121864,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,GSE336890,GSE336890,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0001085,luna,"AIN, ATI, reference",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9644,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9844156,,,train,sda-all,samples/GSE336890/GSM9844156,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9844157,kidney,disease,interstitial nephritis,cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,23409,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,GSE336890,GSE336890,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,kidney,MONDO:0001085,luna,AIN,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9644,counts,um,1.0,verified,0.5000110035211267,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844157,,,train,sda-all,samples/GSE336890/GSM9844157,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9844158,kidney,disease,interstitial nephritis,medulla of organ,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,13860,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,GSE336890,GSE336890,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000958,kidney,MONDO:0001085,luna,AIN,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9644,counts,um,1.0,verified,0.5000235682300259,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844158,,,train,sda-all,samples/GSE336890/GSM9844158,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9844159,kidney,disease,nephritis,cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,16807,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,GSE336890,GSE336890,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,kidney,MONDO:0001166,luna,ATI,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9644,counts,um,1.0,verified,0.5000219298245614,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844159,,,train,sda-all,samples/GSE336890/GSM9844159,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.88, ""life_stage"": 1.0}",,
GSM9844160,kidney,disease,nephritis,cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,12177,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,GSE336890,GSE336890,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,kidney,MONDO:0001166,luna,ATI,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9644,counts,um,1.0,verified,0.49999060644773424,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844160,,,train,sda-all,samples/GSE336890/GSM9844160,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9844161,kidney,disease,interstitial nephritis,cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,21387,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,GSE336890,GSE336890,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,kidney,MONDO:0001085,luna,AIN,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9644,counts,um,1.0,verified,0.49998534583821796,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844161,,,train,sda-all,samples/GSE336890/GSM9844161,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9844162,kidney,disease,interstitial nephritis,cortex,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,24221,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,GSE336890,GSE336890,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001851,kidney,MONDO:0001085,luna,"AIN, ATI",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9644,counts,um,1.0,verified,0.5000034441587069,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844162,,,train,sda-all,samples/GSE336890/GSM9844162,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9844163,kidney,normal,,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,26598,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,GSE336890,GSE336890,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,,luna,reference,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9644,counts,um,1.0,verified,0.5000038803807947,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9844163,,,train,sda-all,samples/GSE336890/GSM9844163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.78, ""life_stage"": 1.0}",,
GSM9844164,kidney,disease,interstitial nephritis,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,98714,Spatial analysis reveals cellular microenvironments and mechanisms of inflammation and injury in acute interstitial nephritis,GSE336890,GSE336890,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,kidney,MONDO:0001085,luna,"AIN, ATI, reference",,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,9644,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9844164,,,train,sda-all,samples/GSE336890/GSM9844164,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9848653,brain,disease,Huntington disease,brain,primary tissue,Homo sapiens,human,adult,male,Visium HD,Visium HD,False,,687015,Spatial transcriptomics of early-grade Huntington’s disease and control Caudate,GSE337131,GSE337131,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,Caudate,MONDO:0007739,luna,PN,,age rule: bare number read as years,adult,59.9,extracted field,male,GSE337131:BG_14,BG_14,fresh frozen,Fresh-frozen,release v3,sequencing-based,Visium HD,,,bin,39125,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9848653,,,val,sda-all,samples/GSE337131/GSM9848653,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.91, ""uberon"": 0.37, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9848654,brain,disease,Huntington disease,brain,primary tissue,Homo sapiens,human,adult,male,Visium HD,Visium HD,False,,688126,Spatial transcriptomics of early-grade Huntington’s disease and control Caudate,GSE337131,GSE337131,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000955,Caudate,MONDO:0007739,luna,HD (grade 0/1),,age rule: bare number read as years,adult,59,extracted field,male,GSE337131:BG_13,BG_13,fresh frozen,Fresh-frozen,release v3,sequencing-based,Visium HD,,,bin,37082,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9848654,,,val,sda-all,samples/GSE337131/GSM9848654,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.28, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9852121,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,60866,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000096000472616,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852121,,,train,sda-all,samples/GSE337270/GSM9852121,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852122,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,92702,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999926188367283,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852122,,,train,sda-all,samples/GSE337270/GSM9852122,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9852123,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,116070,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000124062637847,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852123,,,train,sda-all,samples/GSE337270/GSM9852123,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852124,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,93056,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999980608129073,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852124,,,train,sda-all,samples/GSE337270/GSM9852124,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852125,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,67756,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999284260083976,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852125,,,train,sda-all,samples/GSE337270/GSM9852125,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852126,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,115307,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000110809053838,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852126,,,train,sda-all,samples/GSE337270/GSM9852126,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9852127,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,108738,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999924121185365,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852127,,,train,sda-all,samples/GSE337270/GSM9852127,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852128,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,102548,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000116423470972,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852128,,,train,sda-all,samples/GSE337270/GSM9852128,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9852129,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,87165,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000015904319612,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852129,,,train,sda-all,samples/GSE337270/GSM9852129,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852130,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,100588,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998965904390474,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852130,,,train,sda-all,samples/GSE337270/GSM9852130,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9852131,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,99780,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999931007837509,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852131,,,train,sda-all,samples/GSE337270/GSM9852131,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852132,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,107932,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000027583163237,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852132,,,train,sda-all,samples/GSE337270/GSM9852132,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852133,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,81569,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000135135135135,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852133,,,train,sda-all,samples/GSE337270/GSM9852133,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852134,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,109767,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000096519772764,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852134,,,train,sda-all,samples/GSE337270/GSM9852134,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9852135,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,109123,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999987070080166,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852135,,,train,sda-all,samples/GSE337270/GSM9852135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9852136,brain,normal,,brain,primary tissue,Mus musculus,house mouse,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,111646,"Xenium dataset for ""A conserved population of genetically defined striatal neurons gates opioid reward""",GSE337270,GSE337270,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,age rule: age with unit,adult,11-12 weeks,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500005170898185,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9852136,,,train,sda-all,samples/GSE337270/GSM9852136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9853377,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2031,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,patch,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853377,,,val,sda-all,samples/GSE337336/GSM9853377,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9853378,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2772,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,patch,luna,not stated,,not stated,,GSE337336:2,2,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853378,,,val,sda-all,samples/GSE337336/GSM9853378,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9853379,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2026,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,patch,luna,not stated,,not stated,,GSE337336:3,3,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853379,,,val,sda-all,samples/GSE337336/GSM9853379,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 0.99, ""uberon"": 0.5, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9853380,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2820,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,patch,luna,not stated,,not stated,,GSE337336:4,4,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853380,,,val,sda-all,samples/GSE337336/GSM9853380,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9, ""disease_status"": 1.0, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9853381,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3418,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,patch,luna,not stated,,not stated,,GSE337336:5,5,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853381,,,val,sda-all,samples/GSE337336/GSM9853381,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.61, ""disease_status"": 1.0, ""uberon"": 0.62, ""life_stage"": 1.0}",,
GSM9853382,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1173,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,patch,luna,not stated,,not stated,,GSE337336:6,6,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853382,,,val,sda-all,samples/GSE337336/GSM9853382,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.72, ""disease_status"": 1.0, ""uberon"": 0.68, ""life_stage"": 1.0}",,
GSM9853383,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,1675,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,patch,luna,not stated,,not stated,,GSE337336:7,7,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853383,,,val,sda-all,samples/GSE337336/GSM9853383,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 1.0, ""uberon"": 0.7000000000000001, ""life_stage"": 1.0}",,
GSM9853384,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,2439,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,patch,luna,not stated,,not stated,,GSE337336:8,8,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853384,,,val,sda-all,samples/GSE337336/GSM9853384,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.48, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9853385,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4947,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,plaque,luna,not stated,,not stated,,GSE337336:9,9,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853385,,,val,sda-all,samples/GSE337336/GSM9853385,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9853386,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,7952,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,plaque,luna,not stated,,not stated,,GSE337336:10,10,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853386,,,val,sda-all,samples/GSE337336/GSM9853386,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 0.96, ""life_stage"": 1.0}",,
GSM9853387,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4354,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,plaque,luna,not stated,,not stated,,GSE337336:11,11,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853387,,,val,sda-all,samples/GSE337336/GSM9853387,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9853388,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3782,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,plaque,luna,not stated,,not stated,,GSE337336:12,12,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853388,,,val,sda-all,samples/GSE337336/GSM9853388,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.99, ""uberon"": 0.85, ""life_stage"": 1.0}",,
GSM9853389,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,3373,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,plaque,luna,not stated,,not stated,,GSE337336:13,13,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853389,,,val,sda-all,samples/GSE337336/GSM9853389,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9853390,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,11739,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,plaque,luna,not stated,,not stated,,GSE337336:14,14,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853390,,,val,sda-all,samples/GSE337336/GSM9853390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 1.0, ""uberon"": 0.87, ""life_stage"": 1.0}",,
GSM9853391,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,4885,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,plaque,luna,not stated,,not stated,,GSE337336:15,15,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853391,,,val,sda-all,samples/GSE337336/GSM9853391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9853392,skin,disease,mycosis fungoides,zone of skin,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,6331,Genomic and spatial transcriptomics identify fibroblast-associated microenvironment in early mycosis fungoides progression,GSE337336,GSE337336,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0000014,skin,MONDO:0009691,luna,mycosis fungoides,plaque,luna,not stated,,not stated,,GSE337336:16,16,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,1000,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9853392,,,val,sda-all,samples/GSE337336/GSM9853392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9856933,thyroid,disease,thyroid gland mucosa-associated lymphoid tissue lymphoma,thyroid gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),50739,"Efficacy, safety, and spatial transcriptomic rationale of orelabrutinib plus obinutuzumab in marginal zone lymphoma",GSE337521,GSE337521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002046,thyroid,MONDO:0006464,luna,,first-line orelabrutinib plus obinutuzumab cohort; pretreatment biopsy,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,1.2884697655653639,VERIFIED,ABSENT,ABSENT,image_partial_coverage,,VERIFIED,PASS,,,42436125,,GSM9856933,,,test,sda-all,samples/GSE337521/GSM9856933,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9856934,other,disease,MALT lymphoma,labial gland,tumour tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),144957,"Efficacy, safety, and spatial transcriptomic rationale of orelabrutinib plus obinutuzumab in marginal zone lymphoma",GSE337521,GSE337521,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:8480065,labial gland,MONDO:0007650,luna,,first-line orelabrutinib plus obinutuzumab cohort; pretreatment biopsy,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,0.673467259324481,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42436125,,GSM9856934,,,test,sda-all,samples/GSE337521/GSM9856934,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9857595,lung,normal,,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2370,Persistent Lung Inflammation and Fibrosis After Mouse-Adapted Omicron BA.1 Infection,GSE337537,GSE337537,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Pulmonary tissue,,luna,,PBS Mock Infected,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,7.000046564739912,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9857595,,,train,sda-all,samples/GSE337537/GSM9857595,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9857596,lung,disease,infectious disease,lung,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,1817,Persistent Lung Inflammation and Fibrosis After Mouse-Adapted Omicron BA.1 Infection,GSE337537,GSE337537,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Pulmonary tissue,MONDO:0005550,luna,,Omicron BA.1 MA Infected,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,6.931628435795099,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9857596,,,train,sda-all,samples/GSE337537/GSM9857596,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9858163,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Other,SeekSpace,False,,30560,The spatial transcriptomics of the mouse brain 3 days after tMCAO,GSE337578,GSE337578,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,SeekSpace,,,cell,32286,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9858163,,,train,sda-all,samples/GSE337578/GSM9858163,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9858855,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4863,GDF15 Suppresses Liver Inflammation Independently of Weight Loss through Neuroendocrine Glucocorticoid Signaling,GSE337623,GSE337623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,GDF15,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.481369845974921,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9858855,,,train,sda-all,samples/GSE337623/GSM9858855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9858856,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4879,GDF15 Suppresses Liver Inflammation Independently of Weight Loss through Neuroendocrine Glucocorticoid Signaling,GSE337623,GSE337623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,GDF15,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.365690978170349,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9858856,,,train,sda-all,samples/GSE337623/GSM9858856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9858857,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4924,GDF15 Suppresses Liver Inflammation Independently of Weight Loss through Neuroendocrine Glucocorticoid Signaling,GSE337623,GSE337623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Caloric restriction,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.177033114104411,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9858857,,,train,sda-all,samples/GSE337623/GSM9858857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9858858,liver,perturbation,,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,4963,GDF15 Suppresses Liver Inflammation Independently of Weight Loss through Neuroendocrine Glucocorticoid Signaling,GSE337623,GSE337623,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,,Caloric restriction,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,4.637115338690455,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9858858,,,train,sda-all,samples/GSE337623/GSM9858858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9861745,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,3967,Exploratory Single-nucleus Multiomics of Myeloid Cell States Associated with Neoadjuvant Chemotherapy Response in Human Pancreatic Ductal Adenocarcinoma,GSE337859,GSE337859,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreas,MONDO:0005184,luna,,Untreated,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,UNSURE,registration correct (acceptance too strict),,42735906,,GSM9861745,,,train,sda-all,samples/GSE337859/GSM9861745,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9861746,pancreas,disease,pancreatic ductal adenocarcinoma,pancreas,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E,4970,Exploratory Single-nucleus Multiomics of Myeloid Cell States Associated with Neoadjuvant Chemotherapy Response in Human Pancreatic Ductal Adenocarcinoma,GSE337859,GSE337859,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001264,Pancreas,MONDO:0005184,luna,,Folfirinox & Gem/Abraxane,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18120,counts,um,1.0,verified,5.8508887444227,VERIFIED,ABSENT,ABSENT,,,VERIFIED,UNSURE,,,42735906,,GSM9861746,,,train,sda-all,samples/GSE337859/GSM9861746,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9863174,lymph node,disease,,lymph node,metastasis,Mus musculus,house mouse,not stated,unknown,CosMx,CosMx,False,,351037,PTPN1/2 inhibits alveolar macrophage-mediated control of lung metastasis [CosMx SMI],GSE337933,GSE337933,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,uberon_chain,UBERON:0000029,"lung, lymph node",,luna,,multi-region (vehicle and AC484),luna,not stated,,not stated,,,,,,release v3,imaging-based,CosMx,,,cell,1194,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9863174,,,val,sda-all,samples/GSE337933/GSM9863174,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.98, ""disease_status"": 0.43, ""uberon"": 0.48, ""life_stage"": 1.0}",disease_status;uberon,low_confidence_annotation
GSM9866598,kidney,normal,,kidney,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,347622,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,GSE338104,GSE338104,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002113,kidney,,luna,,untreated control,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999948282995448,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866598,,,train,sda-all,samples/GSE338104/GSM9866598,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.81, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 0.98}",,
GSM9866599,kidney,perturbation,,kidney,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,324796,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,GSE338104,GSE338104,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002113,kidney,,luna,,Fe-NTA i.p. for 1 week,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500005170898185,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866599,,,train,sda-all,samples/GSE338104/GSM9866599,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9866600,kidney,perturbation,,kidney,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,377793,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,GSE338104,GSE338104,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002113,kidney,,luna,,Fe-NTA i.p. for 3 weeks,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000054456739567,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866600,,,train,sda-all,samples/GSE338104/GSM9866600,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9866601,kidney,perturbation,,kidney,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,349164,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,GSE338104,GSE338104,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002113,kidney,,luna,,untreated control,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999963510752165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866601,,,train,sda-all,samples/GSE338104/GSM9866601,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.41000000000000003, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9866602,kidney,perturbation,,kidney,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,425329,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,GSE338104,GSE338104,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002113,kidney,,luna,,Fe-NTA i.p. for 1 week,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000030406227196,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866602,,,train,sda-all,samples/GSE338104/GSM9866602,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9866603,kidney,perturbation,,kidney,primary tissue,Rattus norvegicus,Norway rat,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,531476,Iron-Catalyzed Oxidative Stress Reveals an Exposome-Related Ferroptosis-Resistant Karyomegalic Niche in BRCA1-Linked Renal Carcinogenesis,GSE338104,GSE338104,10116,Rattus norvegicus,10116,,False,False,GEO organism field,Rattus norvegicus,Rattus norvegicus,luna,UBERON:0002113,kidney,,luna,,Fe-NTA i.p. for 3 weeks,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42442115,,GSM9866603,,,train,sda-all,samples/GSE338104/GSM9866603,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.96, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9869917,plant,normal,,,primary tissue,Nymphaea colorata,pocket water lily,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,5703,Spatiotemporal transcriptome atlas of water lily floral organogenesis provide insight to the evolutionary origin of novel traits of angiosperms [Spatial Transcriptomics],GSE338249,GSE338249,210225,Nymphaea colorata,210225,,False,False,GEO organism field,Nymphaea colorata,,luna,,floral bud,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,24059,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9869917,,,test,sda-all,samples/GSE338249/GSM9869917,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.88}",,
GSM9869918,plant,normal,,,primary tissue,Nymphaea colorata,pocket water lily,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,9588,Spatiotemporal transcriptome atlas of water lily floral organogenesis provide insight to the evolutionary origin of novel traits of angiosperms [Spatial Transcriptomics],GSE338249,GSE338249,210225,Nymphaea colorata,210225,,False,False,GEO organism field,Nymphaea colorata,,luna,,floral bud,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,24059,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9869918,,,test,sda-all,samples/GSE338249/GSM9869918,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.99}",,
GSM9869919,plant,normal,,,primary tissue,Nymphaea colorata,pocket water lily,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,18401,Spatiotemporal transcriptome atlas of water lily floral organogenesis provide insight to the evolutionary origin of novel traits of angiosperms [Spatial Transcriptomics],GSE338249,GSE338249,210225,Nymphaea colorata,210225,,False,False,GEO organism field,Nymphaea colorata,,luna,,floral bud,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,24059,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9869919,,,test,sda-all,samples/GSE338249/GSM9869919,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.81}",,
GSM9869920,plant,normal,,,primary tissue,Nymphaea colorata,pocket water lily,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,40741,Spatiotemporal transcriptome atlas of water lily floral organogenesis provide insight to the evolutionary origin of novel traits of angiosperms [Spatial Transcriptomics],GSE338249,GSE338249,210225,Nymphaea colorata,210225,,False,False,GEO organism field,Nymphaea colorata,,luna,,floral bud,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,24059,counts,unstated,,unresolved,,,,,units_unstated,zero_count_observations,VERIFIED,,,,,,GSM9869920,,,test,sda-all,samples/GSE338249/GSM9869920,sda-tissue-disease-2.4,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 0.98}",,
GSM9869921,plant,normal,,,primary tissue,Nymphaea colorata,pocket water lily,not stated,unknown,BMK S1000,BMKMANU S1000/S3000,False,,34939,Spatiotemporal transcriptome atlas of water lily floral organogenesis provide insight to the evolutionary origin of novel traits of angiosperms [Spatial Transcriptomics],GSE338249,GSE338249,210225,Nymphaea colorata,210225,,False,False,GEO organism field,Nymphaea colorata,,luna,,floral bud,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,GEO series text (assay_final.csv),sequencing-based,other,,,spot,24059,counts,unstated,,unresolved,,,,,units_unstated,,VERIFIED,,,,,,GSM9869921,,,test,sda-all,samples/GSE338249/GSM9869921,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 0.97}",,
GSM9873160,bone,disease,bone fracture,bone tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,3249,MALADAPTIVE IMMUNE-FIBROTIC AXIS DRIVES IMPAIRED LONG BONE REGENERATION UNDER MECHANICAL INSTABILITY,GSE338404,GSE338404,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002481,femoral fracture callus,MONDO:0005315,luna,,"Fracture stabilized with a low-stiffness intramedullary nail, producing a high-strain environment (>15% interfragmentary strain)",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,8.954998923394227,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,42664332,,GSM9873160,,,test,sda-all,samples/GSE338404/GSM9873160,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.92}",disease_status,low_confidence_annotation
GSM9873161,bone,disease,bone fracture,bone tissue,primary tissue,Mus musculus,house mouse,not stated,unknown,Visium,Visium,True,H&E,2031,MALADAPTIVE IMMUNE-FIBROTIC AXIS DRIVES IMPAIRED LONG BONE REGENERATION UNDER MECHANICAL INSTABILITY,GSE338404,GSE338404,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002481,femoral fracture callus,MONDO:0005315,mondo_predicate (Luna: perturbation),,"Fracture stabilized with a high-stiffness intramedullary nail, producing a low-strain environment (<5% interfragmentary strain)",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,19465,counts,um,1.0,verified,8.393079441659857,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42664332,,GSM9873161,,,test,sda-all,samples/GSE338404/GSM9873161,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.32, ""uberon"": 1.0, ""life_stage"": 0.91}",disease_status,low_confidence_annotation
GSM9875803,stomach,disease,gastric cancer,stomach,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,False,,4992,Spatial transcriptomic profiling of human gastric cancer FFPE specimens,GSE338506,GSE338506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000945,Stomach,MONDO:0001056,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18061,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9875803,,,train,sda-all,samples/GSE338506/GSM9875803,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 0.43, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9876361,liver,disease,liver disorder;biliary atresia,liver,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,fluorescence: immunofluorescence,1392,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0005154;MONDO:0008867,luna,billiary atresia (BA),,luna,not stated,,extracted field,male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,4.329313102928834,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific modality should be stated,42520160,,GSM9876361,,,train,sda-all,samples/GSE338525/GSM9876361,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9876362,liver,disease,liver disorder;biliary atresia,liver,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,fluorescence: immunofluorescence,1537,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0005154;MONDO:0008867,luna,billiary atresia (BA),,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,4.395083781084586,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,the specific modality should be stated,42520160,,GSM9876362,,,train,sda-all,samples/GSE338525/GSM9876362,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9876363,liver,disease,liver disorder;biliary atresia,liver,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,fluorescence: immunofluorescence,1215,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0005154;MONDO:0008867,luna,billiary atresia (BA),,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,4.5634884062291645,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876363,,,train,sda-all,samples/GSE338525/GSM9876363,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 0.99}",,
GSM9876364,liver,disease,liver disorder;biliary atresia,liver,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,fluorescence: immunofluorescence,944,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0005154;MONDO:0008867,luna,billiary atresia (BA),,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,4.316903280254891,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876364,,,train,sda-all,samples/GSE338525/GSM9876364,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9876365,liver,disease,liver disorder;biliary atresia,liver,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,fluorescence: immunofluorescence,816,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0005154;MONDO:0008867,luna,billiary atresia (BA),,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,4.031197389408842,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),"registration is good, but the fluorescence should be stated",42520160,,GSM9876365,,,train,sda-all,samples/GSE338525/GSM9876365,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9876366,liver,disease,liver disorder;biliary atresia,liver,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,fluorescence: immunofluorescence,1224,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0005154;MONDO:0008867,luna,billiary atresia (BA),,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,4.07395204977273,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876366,,,train,sda-all,samples/GSE338525/GSM9876366,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9876367,liver,disease,liver disorder;biliary atresia,liver,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,fluorescence: immunofluorescence,1265,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0005154;MONDO:0008867,luna,billiary atresia (BA),,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,4.075850979931831,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),"registration is good, but the fluorescence should be stated",42520160,,GSM9876367,,,train,sda-all,samples/GSE338525/GSM9876367,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9876368,liver,disease,liver disorder;biliary atresia,liver,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,fluorescence: immunofluorescence,964,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0005154;MONDO:0008867,luna,billiary atresia (BA),,luna,not stated,,extracted field,male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,4.114183864000849,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),"registration is good, but the fluorescence should be stated",42520160,,GSM9876368,,,train,sda-all,samples/GSE338525/GSM9876368,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9876369,liver,disease,progressive familial intrahepatic cholestasis;non-neoplastic bile duct disorder,liver,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,fluorescence: immunofluorescence,737,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0015762;MONDO:0006322,luna,Progressive Familial Intrahepatic Cholestasis (PFIC),,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,3.9357479768010073,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876369,,,train,sda-all,samples/GSE338525/GSM9876369,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9876370,liver,disease,progressive familial intrahepatic cholestasis;non-neoplastic bile duct disorder,liver,primary tissue,Homo sapiens,human,not stated,female,Visium,Visium,True,fluorescence: immunofluorescence,636,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0015762;MONDO:0006322,luna,Progressive Familial Intrahepatic Cholestasis (PFIC),,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,3.9137173219599073,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876370,,,train,sda-all,samples/GSE338525/GSM9876370,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.9500000000000001, ""life_stage"": 1.0}",,
GSM9876371,liver,disease,liver disorder;Alagille syndrome;cholestasis;non-neoplastic bile duct disorder,liver,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,fluorescence: immunofluorescence,1712,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0005154;MONDO:0007318;MONDO:0001751;MONDO:0006322,luna,Alagille Syndrome,,luna,not stated,,extracted field,male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,3.874318318228861,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876371,,,train,sda-all,samples/GSE338525/GSM9876371,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9876372,liver,disease,liver disorder;Alagille syndrome;cholestasis;non-neoplastic bile duct disorder,liver,primary tissue,Homo sapiens,human,not stated,male,Visium,Visium,True,fluorescence: immunofluorescence,1644,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,MONDO:0005154;MONDO:0007318;MONDO:0001751;MONDO:0006322,luna,Alagille Syndrome,,luna,not stated,,extracted field,male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,3.846862599088768,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876372,,,train,sda-all,samples/GSE338525/GSM9876372,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9876373,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,1078,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,Normal,,luna,not stated,,not stated,not collected,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,4.0116683492127025,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,other,"registration is good, but the fluorescence should be stated; the image may look gridded",42520160,,GSM9876373,,,train,sda-all,samples/GSE338525/GSM9876373,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9876374,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,2201,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,Normal,,luna,not stated,,not stated,not collected,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,3.9450504498534062,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,other,"registration is good, but the fluorescence should be stated; the image may look gridded",42520160,,GSM9876374,,,train,sda-all,samples/GSE338525/GSM9876374,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9876375,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,1521,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,Normal,,luna,not stated,,not stated,not collected,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,3.899380951767101,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876375,,,train,sda-all,samples/GSE338525/GSM9876375,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9876376,liver,normal,,liver,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,fluorescence: immunofluorescence,1549,Spatial transcriptomics supports a role for SOX-4 driven signaling throughout the disease course of biliary atresia,GSE338525,GSE338525,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002107,liver,,luna,Normal,,luna,not stated,,not stated,not collected,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,37481,counts,um,1.0,verified,3.8944974451252947,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,modality details missing,42520160,,GSM9876376,,,train,sda-all,samples/GSE338525/GSM9876376,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9879486,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,75549,A Novel Heterozygous STAT5B Loss-of-Function Variant Associated with Interleukin-17A-Responsive Systemic Juvenile Idiopathic Arthritis-like Disease,GSE338671,GSE338671,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,"Heterozygous STAT5B loss-of-function variant, c.415C>T (p.Gln139Ter)",luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000097732603597,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9879486,,,train,sda-all,samples/GSE338671/GSM9879486,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 0.97, ""life_stage"": 0.99}",,
GSM9879487,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,37295,A Novel Heterozygous STAT5B Loss-of-Function Variant Associated with Interleukin-17A-Responsive Systemic Juvenile Idiopathic Arthritis-like Disease,GSE338671,GSE338671,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999956440301433,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9879487,,,train,sda-all,samples/GSE338671/GSM9879487,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 0.99, ""life_stage"": 0.97}",,
GSM9879488,other,disease,juvenile idiopathic arthritis,layer of synovial tissue,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,38514,A Novel Heterozygous STAT5B Loss-of-Function Variant Associated with Interleukin-17A-Responsive Systemic Juvenile Idiopathic Arthritis-like Disease,GSE338671,GSE338671,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0007616,synovium,MONDO:0011429,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999983642311886,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9879488,,,train,sda-all,samples/GSE338671/GSM9879488,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 0.96, ""life_stage"": 0.99}",,
GSM9893296,unknown,disease,extranodal nasal NK/T cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,CosMx,CosMx,False,,120696,Multimodal spatial profiling reveals distinct myeloid-defined ENKTL subgroups and tumor-myeloid cooperativity within prognostic inflammatory niche [ENKTL_CosMx6x],GSE339304,GSE339304,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,,ENKTL FFPE sample,MONDO:0019472,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,CosMx,,,cell,6175,unknown,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9893296,,,train,sda-all,samples/GSE339304/GSM9893296,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9895920,kidney,disease,hypertensive nephropathy,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),786,Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [Spatial Transcriptomics],GSE339455,GSE339455,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Formalin Fixed Paraffin embedded kidney tissue,MONDO:0024633,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,4.814940550237359,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9895920,,,val,sda-all,samples/GSE339455/GSM9895920,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9895921,kidney,disease,hypertensive nephropathy,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1212,Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [Spatial Transcriptomics],GSE339455,GSE339455,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Formalin Fixed Paraffin embedded kidney tissue,MONDO:0024633,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,3.697794218598132,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9895921,,,val,sda-all,samples/GSE339455/GSM9895921,sda-tissue-disease-2.3,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9895922,kidney,disease,hypertensive nephropathy,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),1125,Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [Spatial Transcriptomics],GSE339455,GSE339455,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Formalin Fixed Paraffin embedded kidney tissue,MONDO:0024633,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,4.581459015002735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9895922,,,val,sda-all,samples/GSE339455/GSM9895922,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9895923,kidney,disease,hypertensive nephropathy,kidney,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),904,Integrated bulk and spatial transcriptomic analysis identifies progression-associated molecular signatures in biopsy-proven hypertensive nephropathy [Spatial Transcriptomics],GSE339455,GSE339455,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002113,Formalin Fixed Paraffin embedded kidney tissue,MONDO:0024633,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,5.086483448802158,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9895923,,,val,sda-all,samples/GSE339455/GSM9895923,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9901430,other,normal,,trunk,primary tissue,Leucoraja erinaceus,little skate,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,190499,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,GSE341169,GSE341169,7782,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,luna,UBERON:0002100,embryonic trunk transverse section,,luna,,,luna,embryonic,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000067567567568,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901430,,,train,sda-all,samples/GSE341169/GSM9901430,sda-tissue-disease-2.4,"{""organ"": 0.86, ""sample_kind"": 0.99, ""disease_status"": 0.61, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9901431,other,normal,,trunk,primary tissue,Leucoraja erinaceus,little skate,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,179565,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,GSE341169,GSE341169,7782,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,luna,UBERON:0002100,embryonic trunk transverse section,,luna,,,luna,embryonic,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999156545209167,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901431,,,train,sda-all,samples/GSE341169/GSM9901431,sda-tissue-disease-2.4,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.5700000000000001, ""uberon"": 0.87, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9901432,other,normal,,trunk,primary tissue,Leucoraja erinaceus,little skate,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,129522,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,GSE341169,GSE341169,7782,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,luna,UBERON:0002100,embryonic trunk transverse section,,luna,,,luna,embryonic,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000242483026187,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901432,,,train,sda-all,samples/GSE341169/GSM9901432,sda-tissue-disease-2.4,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.96, ""disease_status"": 0.67, ""uberon"": 0.89, ""life_stage"": 1.0}",,
GSM9901433,other,normal,,trunk,primary tissue,Leucoraja erinaceus,little skate,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,162075,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,GSE341169,GSE341169,7782,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,luna,UBERON:0002100,embryonic trunk transverse section,,luna,,,luna,embryonic,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999828273114433,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901433,,,train,sda-all,samples/GSE341169/GSM9901433,sda-tissue-disease-2.4,"{""organ"": 0.72, ""sample_kind"": 0.99, ""disease_status"": 0.79, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9901434,other,normal,,trunk,primary tissue,Leucoraja erinaceus,little skate,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,193664,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,GSE341169,GSE341169,7782,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,luna,UBERON:0002100,embryonic trunk transverse section,,luna,,,luna,embryonic,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000448922585794,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901434,,,train,sda-all,samples/GSE341169/GSM9901434,sda-tissue-disease-2.4,"{""organ"": 0.9, ""sample_kind"": 0.98, ""disease_status"": 0.77, ""uberon"": 0.92, ""life_stage"": 0.99}",,
GSM9901435,other,normal,,trunk,primary tissue,Leucoraja erinaceus,little skate,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,171459,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,GSE341169,GSE341169,7782,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,luna,UBERON:0002100,embryonic trunk transverse section,,luna,,,luna,embryonic,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000475761217948,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901435,,,train,sda-all,samples/GSE341169/GSM9901435,sda-tissue-disease-2.4,"{""organ"": 0.91, ""sample_kind"": 0.99, ""disease_status"": 0.84, ""uberon"": 0.89, ""life_stage"": 0.99}",,
GSM9901436,other,normal,,trunk,primary tissue,Leucoraja erinaceus,little skate,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,125982,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,GSE341169,GSE341169,7782,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,luna,UBERON:0002100,embryonic trunk transverse section,,luna,,,luna,embryonic,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000128047531244,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901436,,,train,sda-all,samples/GSE341169/GSM9901436,sda-tissue-disease-2.4,"{""organ"": 0.84, ""sample_kind"": 0.99, ""disease_status"": 0.77, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM9901437,other,normal,,trunk,primary tissue,Leucoraja erinaceus,little skate,embryonic,unknown,Xenium,Xenium,True,fluorescence: DAPI,137905,Ancient Somatosensory Circuit Architectures Employ Flexible Molecular Strategies,GSE341169,GSE341169,7782,Leucoraja erinaceus,7782,,False,False,GEO organism field,Leucoraja erinaceus,,luna,UBERON:0002100,embryonic trunk transverse section,,luna,,,luna,embryonic,,not stated,,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000355546525803,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9901437,,,train,sda-all,samples/GSE341169/GSM9901437,sda-tissue-disease-2.4,"{""organ"": 0.64, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.93, ""life_stage"": 1.0}",,
GSM9902424,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),2493,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,14.56573535399683,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902424,,,test,sda-all,samples/GSE341225/GSM9902424,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902425,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3997,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,14.608818814924081,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902425,,,test,sda-all,samples/GSE341225/GSM9902425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902426,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3049,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,14.627984496572244,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902426,,,test,sda-all,samples/GSE341225/GSM9902426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902427,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),4499,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,14.624076768297233,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902427,,,test,sda-all,samples/GSE341225/GSM9902427,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902428,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3333,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,14.629647765192955,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902428,,,test,sda-all,samples/GSE341225/GSM9902428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902429,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,other bright-field stain (heuristic),3140,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,14.604940572874993,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902429,,,test,sda-all,samples/GSE341225/GSM9902429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902430,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3404,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,15.624300100084753,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902430,,,test,sda-all,samples/GSE341225/GSM9902430,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902431,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2632,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,14.621861455441636,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902431,,,test,sda-all,samples/GSE341225/GSM9902431,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902432,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1181,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,14.624479677966056,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902432,,,test,sda-all,samples/GSE341225/GSM9902432,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9902433,brain,disease,astrocytoma (excluding glioblastoma),brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3951,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0019781,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,14.633790307315982,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902433,,,test,sda-all,samples/GSE341225/GSM9902433,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902436,brain,disease,oligodendroglioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,blue bright-field stain (heuristic),797,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0016695,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,15.675014769851273,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902436,,,test,sda-all,samples/GSE341225/GSM9902436,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902438,brain,disease,oligodendroglioma,brain,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2656,Spatial analysis reveals the evolving organization of IDH-mutant glioma,GSE341225,GSE341225,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000955,IDH mutant glioma,MONDO:0016695,luna,,,luna,not stated,,not stated,,,,fresh frozen,fresh frozen,release v3,sequencing-based,Visium,,,spot,33538,counts,um,1.0,verified,14.609733594738332,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9902438,,,test,sda-all,samples/GSE341225/GSM9902438,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9902814,skin,disease,keloid,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,86647,Xenium spatial transcriptomics identifies mesenchymal fibroblast expansion and conserved fibrotic ECM programs in keloid,GSE341250,GSE341250,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005348,luna,,Normal Skin and Keloid,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999903474903475,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9902814,,,train,sda-all,samples/GSE341250/GSM9902814,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.5, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9902815,skin,disease,keloid,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,64091,Xenium spatial transcriptomics identifies mesenchymal fibroblast expansion and conserved fibrotic ECM programs in keloid,GSE341250,GSE341250,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,Skin,MONDO:0005348,luna,,Keloid,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499996308328411,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9902815,,,train,sda-all,samples/GSE341250/GSM9902815,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.73, ""life_stage"": 1.0}",,
GSM9905856,lung,disease,neoplasm,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium HD,Visium HD,True,H&E,554078,Spatial transcriptomics of mouse lung after tumor induction.,GSE341382,GSE341382,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005070,luna,,Control,age rule: age with unit,adult,13-14 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,1.9752066459211004,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9905856,,,train,sda-all,samples/GSE341382/GSM9905856,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.88, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9905857,lung,disease,neoplasm,lung,tumour tissue,Mus musculus,house mouse,adult,unknown,Visium HD,Visium HD,True,H&E,583055,Spatial transcriptomics of mouse lung after tumor induction.,GSE341382,GSE341382,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002048,Lung,MONDO:0005070,luna,,DCP monotherapy,age rule: age with unit,adult,13-14 weeks,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,19059,counts,um,1.0,verified,2.028065483496312,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9905857,,,train,sda-all,samples/GSE341382/GSM9905857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9913880,colon,disease,,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: green (heuristic),2381,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 6 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.330772370635235,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913880,,,train,sda-all,samples/GSE341607/GSM9913880,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 0.8200000000000001}",,
GSM9913881,colon,disease,,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2128,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 6 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.333445569482791,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913881,,,train,sda-all,samples/GSE341607/GSM9913881,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9913882,colon,disease,,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2254,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 6 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.332379769138322,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913882,,,train,sda-all,samples/GSE341607/GSM9913882,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 0.89}",,
GSM9913883,colon,disease,,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),1942,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.332083472377197,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913883,,,train,sda-all,samples/GSE341607/GSM9913883,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9913884,colon,disease,,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: green (heuristic),2561,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.332106629259694,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913884,,,train,sda-all,samples/GSE341607/GSM9913884,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.59, ""uberon"": 1.0, ""life_stage"": 0.98}",disease_status,low_confidence_annotation
GSM9913885,colon,disease,,ascending colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),3060,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001156,Ascending colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.332567339124698,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913885,,,train,sda-all,samples/GSE341607/GSM9913885,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 0.81}",disease_status,low_confidence_annotation
GSM9913886,colon,disease,,descending colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2097,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001158,Descending colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.332757234762605,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913886,,,train,sda-all,samples/GSE341607/GSM9913886,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.61, ""uberon"": 1.0, ""life_stage"": 0.97}",,
GSM9913887,colon,disease,,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,H&E,1571,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.332107689893482,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913887,,,train,sda-all,samples/GSE341607/GSM9913887,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9913888,colon,disease,,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),3012,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.336067799507608,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913888,,,train,sda-all,samples/GSE341607/GSM9913888,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.91}",,
GSM9913889,colon,disease,,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2031,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.334837000039943,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913889,,,train,sda-all,samples/GSE341607/GSM9913889,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 0.92}",,
GSM9913890,colon,disease,infectious disease,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,H&E,2872,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,MONDO:0005550,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIVmac239; suppressive ART initiated 4 days post-infection and maintained for 172 days (~5 months) before analytical treatment interruption (ATI); necropsied 4 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.333144130601269,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913890,,,train,sda-all,samples/GSE341607/GSM9913890,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 0.88}",,
GSM9913891,colon,disease,infectious disease,ascending colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),3194,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001156,Ascending colon,MONDO:0005550,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIV-ffLuc; suppressive ART initiated 4 days post-infection and maintained for 172 days (~5 months) before analytical treatment interruption (ATI); necropsied 4 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.332728502113771,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913891,,,train,sda-all,samples/GSE341607/GSM9913891,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 0.9400000000000001}",,
GSM9913892,small intestine,disease,infectious disease,jejunum,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2661,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0002115,Jejunum,MONDO:0005550,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIV-ffLuc; suppressive ART initiated 4 days post-infection and maintained for 172 days (~5 months) before analytical treatment interruption (ATI); necropsied 4 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.334786333824161,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913892,,,train,sda-all,samples/GSE341607/GSM9913892,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM9913893,colon,disease,infectious disease,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,H&E,2602,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,MONDO:0005550,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIVmac239; suppressive ART initiated 4 days post-infection and maintained for 193 days (~6 months) before analytical treatment interruption (ATI); necropsied 4 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.427046056546735,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913893,,,train,sda-all,samples/GSE341607/GSM9913893,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9913894,colon,disease,infectious disease,transverse colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,H&E,1268,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001157,Transverse colon,MONDO:0005550,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIVmac239; suppressive ART initiated 4 days post-infection and maintained for 193 days (~6 months) before analytical treatment interruption (ATI); necropsied 4 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.425745266881301,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913894,,,train,sda-all,samples/GSE341607/GSM9913894,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM9913895,colon,disease,infectious disease,ascending colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,H&E,3021,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001156,Ascending colon,MONDO:0005550,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIVmac239; suppressive ART initiated 4 days post-infection and maintained for 144 days (~4 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.495590781248508,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913895,,,train,sda-all,samples/GSE341607/GSM9913895,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",,
GSM9913896,colon,disease,infectious disease,ascending colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,H&E,1924,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001156,Ascending colon,MONDO:0005550,luna,,"EAEA group (transient reservoir model): challenged intravaginally/intrarectally with a 2000 TCID50 dose of SIVmac239; suppressive ART initiated 4 days post-infection and maintained for 144 days (~4 months) before analytical treatment interruption (ATI); necropsied 5 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,21761,counts,um,1.0,verified,4.495954929160284,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913896,,,train,sda-all,samples/GSE341607/GSM9913896,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 0.99, ""life_stage"": 0.92}",,
GSM9913897,colon,disease,,ascending colon,primary tissue,Macaca mulatta,Rhesus monkey,not stated,unknown,Visium,Visium,True,fluorescence: multichannel (heuristic),2988,A Tissue Virus Microenvironment with Activated Stress Responses Underlies Durable SIV Persistence [Visium],GSE341607,GSE341607,9544,Macaca mulatta,9544,,False,False,GEO organism field,Macaca mulatta,Macaca mulatta,luna,UBERON:0001156,Ascending colon,,luna,,"LAEA group (persistent reservoir model): challenged intravenously with a 300 TCID50 dose of barcoded SIVmac239M2; suppressive ART initiated at week 10 post-challenge and maintained for 382 days (~12 months) before analytical treatment interruption (ATI); necropsied 6 days post-ATI, during the pre-viremic eclipse phase.",luna,not stated,,not stated,,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,35441,counts,um,1.0,verified,4.3242623978042145,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,42614350,,GSM9913897,,,train,sda-all,samples/GSE341607/GSM9913897,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 0.93}",,
GSM9919094,colon,normal,,caecum,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,1143,Spatial transcriptomic atlas of intestinal segments from KM mice,GSE341914,GSE341914,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001153,cecum,,luna,,germ-free,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,cell,11865,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,,,GSM9919094,,,test,sda-all,samples/GSE341914/GSM9919094,sda-tissue-disease-2.3,"{""organ"": 0.92, ""sample_kind"": 0.99, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9919095,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,23254,Spatial transcriptomic atlas of intestinal segments from KM mice,GSE341914,GSE341914,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,colon,,luna,,germ-free,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,cell,20436,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,,,GSM9919095,,,test,sda-all,samples/GSE341914/GSM9919095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9919096,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,4830,Spatial transcriptomic atlas of intestinal segments from KM mice,GSE341914,GSE341914,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002116,ileum,,luna,,germ-free,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,cell,16919,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,,,GSM9919096,,,test,sda-all,samples/GSE341914/GSM9919096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9919097,colon,normal,,caecum,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,683,Spatial transcriptomic atlas of intestinal segments from KM mice,GSE341914,GSE341914,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001153,cecum,,luna,,SPF,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,cell,7290,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,,,GSM9919097,,,test,sda-all,samples/GSE341914/GSM9919097,sda-tissue-disease-2.3,"{""organ"": 0.5, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9919098,colon,normal,,colon,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,33515,Spatial transcriptomic atlas of intestinal segments from KM mice,GSE341914,GSE341914,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001155,colon,,luna,,SPF,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,cell,22599,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,,,GSM9919098,,,test,sda-all,samples/GSE341914/GSM9919098,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9919099,small intestine,normal,,ileum,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,3487,Spatial transcriptomic atlas of intestinal segments from KM mice,GSE341914,GSE341914,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002116,ileum,,luna,,SPF,luna,not stated,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,cell,16721,counts,native_grid,,unresolved,,,,,,,VERIFIED,PASS,,,,,GSM9919099,,,test,sda-all,samples/GSE341914/GSM9919099,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9920041,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,not stated,female,Slide-seq,Curio Seeker,False,,42390,Dual host-pathogen screening of the lung during severe influenza using spatial transcriptomics,GSE341918,GSE341918,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0005812,luna,,PR8-OVA intranasal 500 PFU,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Curioseeker,,,bead,21226,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9920041,,,train,sda-all,samples/GSE341918/GSM9920041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9920042,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,not stated,female,Slide-seq,Curio Seeker,False,,47207,Dual host-pathogen screening of the lung during severe influenza using spatial transcriptomics,GSE341918,GSE341918,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0005812,luna,,PR8-OVA intranasal 500 PFU,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Curioseeker,,,bead,21439,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9920042,,,train,sda-all,samples/GSE341918/GSM9920042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9920043,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,not stated,female,Slide-seq,Curio Seeker,False,,41816,Dual host-pathogen screening of the lung during severe influenza using spatial transcriptomics,GSE341918,GSE341918,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0005812,luna,,PR8-OVA intranasal 500 PFU,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Curioseeker,,,bead,18750,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9920043,,,train,sda-all,samples/GSE341918/GSM9920043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9920044,lung,disease,influenza,lung,primary tissue,Mus musculus,house mouse,not stated,female,Slide-seq,Curio Seeker,False,,30616,Dual host-pathogen screening of the lung during severe influenza using spatial transcriptomics,GSE341918,GSE341918,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0002048,Lung,MONDO:0005812,luna,,PR8-OVA intranasal 500 PFU,luna,not stated,,extracted field,female,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Curioseeker,,,bead,18402,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9920044,,,train,sda-all,samples/GSE341918/GSM9920044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9921338,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,59145,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,luna,,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999811437191443,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921338,,,train,sda-all,samples/GSE341984/GSM9921338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921339,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,386542,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,luna,,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000079083122445,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921339,,,train,sda-all,samples/GSE341984/GSM9921339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921340,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,111028,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,luna,,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000264799340943,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921340,,,train,sda-all,samples/GSE341984/GSM9921340,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921341,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,68589,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,luna,,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998085532516495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921341,,,train,sda-all,samples/GSE341984/GSM9921341,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.96, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921342,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,454031,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,luna,,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000110586847537,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921342,,,train,sda-all,samples/GSE341984/GSM9921342,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921343,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,203952,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,mondo_predicate (Luna: perturbation),,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000113430127042,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921343,,,train,sda-all,samples/GSE341984/GSM9921343,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921344,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,55579,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,mondo_predicate (Luna: perturbation),,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998854262144815,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921344,,,train,sda-all,samples/GSE341984/GSM9921344,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.67, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921345,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,185750,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,mondo_predicate (Luna: perturbation),,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000167198271427,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921345,,,train,sda-all,samples/GSE341984/GSM9921345,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.36, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9921346,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,139603,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,luna,,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500009387908374,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921346,,,train,sda-all,samples/GSE341984/GSM9921346,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921347,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,271489,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,luna,,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000082665123584,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921347,,,train,sda-all,samples/GSE341984/GSM9921347,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921348,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,99937,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,luna,,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49997603068072866,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921348,,,train,sda-all,samples/GSE341984/GSM9921348,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.6000000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9921349,pancreas,disease,malignant pancreatic neoplasm,pancreas,tumour tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,182576,KDM6 Histone Demethylases Tune Pancreatic Cancer Plasticity,GSE341984,GSE341984,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0001264,Pancreas,MONDO:0009831,luna,,Not applicable,luna,not stated,,not stated,,,,FFPE,"Formalin fixed, paraffin embedded",release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999941259398496,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9921349,,,train,sda-all,samples/GSE341984/GSM9921349,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9924903,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Xenium,Xenium,False,,54424,nf_xpatial: A Reproducible Framework for Standardized Preprocessing and Clustering of Xenium Data,GSE342202,GSE342202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,extracted field,Male,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9924903,,,train,sda-all,samples/GSE342202/GSM9924903,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9924904,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,56933,nf_xpatial: A Reproducible Framework for Standardized Preprocessing and Clustering of Xenium Data,GSE342202,GSE342202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9924904,,,train,sda-all,samples/GSE342202/GSM9924904,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.63, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9924905,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,60698,nf_xpatial: A Reproducible Framework for Standardized Preprocessing and Clustering of Xenium Data,GSE342202,GSE342202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9924905,,,train,sda-all,samples/GSE342202/GSM9924905,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9924906,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Xenium,Xenium,False,,58841,nf_xpatial: A Reproducible Framework for Standardized Preprocessing and Clustering of Xenium Data,GSE342202,GSE342202,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,,luna,not stated,,extracted field,Female,,,,,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9924906,,,train,sda-all,samples/GSE342202/GSM9924906,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9927390,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,287576,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Xenium],GSE342289,GSE342289,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000059601213698,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9927390,,,train,sda-all,samples/GSE342289/GSM9927390,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9927391,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,252807,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Xenium],GSE342289,GSE342289,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999891657638135,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9927391,,,train,sda-all,samples/GSE342289/GSM9927391,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9927392,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,287565,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Xenium],GSE342289,GSE342289,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999783371604345,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9927392,,,train,sda-all,samples/GSE342289/GSM9927392,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9927393,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,205914,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Xenium],GSE342289,GSE342289,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000021685388385,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9927393,,,train,sda-all,samples/GSE342289/GSM9927393,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9928801,liver,disease,chronic liver failure,liver,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,283108,The role of Angiopoietin 1 in acute-on-chronic liver failure,GSE342343,GSE342343,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0100193,luna,,western diet with alcohol/control and CLP/sham surgeries and AAV-TBG-Angpt1/AAV-control,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.5000016322089228,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9928801,,,train,sda-all,samples/GSE342343/GSM9928801,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9936248,unknown,disease,marginal zone lymphoma,,tumour tissue,Canis lupus familiaris,dog,adult,male,Visium,Visium,True,H&E-like (heuristic),4609,"Longitudinal single-cell and spatial transcriptomics reveals intratumor heterogeneity, therapeutic response, and comparative value of canine marginal zone lymphoma [spatial data]",GSE342671,GSE342671,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,,Marginal zone lymphoma,MONDO:0017604,luna,Tumor,VSV,luna,adult,,extracted field,Male,,,fresh frozen,fresh-frozen,release v3,sequencing-based,Visium,,,spot,20257,counts,um,1.0,verified,3.9441824532788288,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936248,,,val,sda-all,samples/GSE342671/GSM9936248,sda-tissue-disease-2.5,"{""organ"": 0.91, ""sample_kind"": 0.98, ""disease_status"": 0.99, ""uberon"": 0.58, ""life_stage"": 0.99}",uberon,low_confidence_annotation
GSM9936455,head and neck,disease,adenoid cystic carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3628,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,GSE342687,GSE342687,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004971,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.040986982397843,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936455,,,train,sda-all,samples/GSE342687/GSM9936455,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.71, ""life_stage"": 1.0}",,
GSM9936456,head and neck,disease,adenoid cystic carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),1843,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,GSE342687,GSE342687,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004971,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.051287198100252,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936456,,,train,sda-all,samples/GSE342687/GSM9936456,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9936457,head and neck,disease,adenoid cystic carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3276,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,GSE342687,GSE342687,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,Tumor,MONDO:0004971,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.05284749071834,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936457,,,train,sda-all,samples/GSE342687/GSM9936457,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.4, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9936458,head and neck,disease,adenoid cystic carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2318,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,GSE342687,GSE342687,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,Tumor,MONDO:0004971,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.048698701582514,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936458,,,train,sda-all,samples/GSE342687/GSM9936458,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9936459,head and neck,disease,adenoid cystic carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4460,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,GSE342687,GSE342687,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,Tumor,MONDO:0004971,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.054937573143291,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936459,,,train,sda-all,samples/GSE342687/GSM9936459,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9936460,head and neck,disease,adenoid cystic carcinoma,head,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3791,Spatial transcriptomic dissection of intratumoral heterogeneity and microenvironment in sinonasal and skull base adenoid cystic carcinoma,GSE342687,GSE342687,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000033,Tumor,MONDO:0004971,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.050972458621778,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936460,,,train,sda-all,samples/GSE342687/GSM9936460,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.49, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9936741,bone,not stated,,head of femur,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,14400,Spatial-SCB,GSE342703,GSE342703,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006767,Human femoral head,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.8799835283589377,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936741,,,train,sda-all,samples/GSE342703/GSM9936741,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9936742,bone,not stated,,head of femur,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,14400,Spatial-SCB,GSE342703,GSE342703,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006767,Human femoral head,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.8794342105477275,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936742,,,train,sda-all,samples/GSE342703/GSM9936742,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9936743,bone,not stated,,head of femur,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,14400,Spatial-SCB,GSE342703,GSE342703,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006767,Human femoral head,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.795987569425817,UNRESOLVED,ABSENT,ABSENT,image_partial_coverage,zero_count_observations,VERIFIED,PASS,,,,,GSM9936743,,,train,sda-all,samples/GSE342703/GSM9936743,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.55, ""uberon"": 0.91, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9936744,bone,not stated,,head of femur,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E,14400,Spatial-SCB,GSE342703,GSE342703,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0006767,Human femoral head,,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium HD,,,bin,18085,counts,um,1.0,verified,2.8800430021515644,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9936744,,,train,sda-all,samples/GSE342703/GSM9936744,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.37, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9937015,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4740,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.756083411682934,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937015,,,train,sda-all,samples/GSE342709/GSM9937015,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937016,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4488,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.748510179085658,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937016,,,train,sda-all,samples/GSE342709/GSM9937016,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937017,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4660,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.751980839972679,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937017,,,train,sda-all,samples/GSE342709/GSM9937017,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937018,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4981,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.633015440034596,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937018,,,train,sda-all,samples/GSE342709/GSM9937018,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937019,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4490,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.636500154245859,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937019,,,train,sda-all,samples/GSE342709/GSM9937019,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937020,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4505,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.620063773538589,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937020,,,train,sda-all,samples/GSE342709/GSM9937020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937021,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4991,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.630175459812951,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937021,,,train,sda-all,samples/GSE342709/GSM9937021,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6900000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937022,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4268,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.896660227135588,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937022,,,train,sda-all,samples/GSE342709/GSM9937022,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937023,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4464,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.888568303707904,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937023,,,train,sda-all,samples/GSE342709/GSM9937023,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937024,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4313,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.902477962557148,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937024,,,train,sda-all,samples/GSE342709/GSM9937024,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937025,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3852,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.89017040014719,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937025,,,train,sda-all,samples/GSE342709/GSM9937025,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.87, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937026,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4143,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.3420812695579025,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937026,,,train,sda-all,samples/GSE342709/GSM9937026,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937027,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4700,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.343632208723565,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937027,,,train,sda-all,samples/GSE342709/GSM9937027,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937028,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4636,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.350037124207183,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937028,,,train,sda-all,samples/GSE342709/GSM9937028,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937029,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3977,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.3423668465419825,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937029,,,train,sda-all,samples/GSE342709/GSM9937029,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937030,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4992,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.861150803556135,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937030,,,train,sda-all,samples/GSE342709/GSM9937030,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937031,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4681,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.854893631809902,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937031,,,train,sda-all,samples/GSE342709/GSM9937031,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937032,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4723,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.8642734250189505,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937032,,,train,sda-all,samples/GSE342709/GSM9937032,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937033,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4918,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,6.264850540639475,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937033,,,train,sda-all,samples/GSE342709/GSM9937033,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937034,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4972,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.020381272009828,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937034,,,train,sda-all,samples/GSE342709/GSM9937034,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937035,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3735,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.02242598228811,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937035,,,train,sda-all,samples/GSE342709/GSM9937035,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937036,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4834,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.0186104832927825,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937036,,,train,sda-all,samples/GSE342709/GSM9937036,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937037,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4940,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.033468401033628,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937037,,,train,sda-all,samples/GSE342709/GSM9937037,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937038,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4587,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.484176368200269,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937038,,,train,sda-all,samples/GSE342709/GSM9937038,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937039,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4793,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.482300079850335,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937039,,,train,sda-all,samples/GSE342709/GSM9937039,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937040,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4570,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.481064174309167,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937040,,,train,sda-all,samples/GSE342709/GSM9937040,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM9937041,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4965,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.475430011036212,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937041,,,train,sda-all,samples/GSE342709/GSM9937041,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937042,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4831,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.728086826444421,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937042,,,train,sda-all,samples/GSE342709/GSM9937042,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.73, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937043,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3929,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.728229727943467,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937043,,,train,sda-all,samples/GSE342709/GSM9937043,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.64, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937044,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4515,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.724236470248054,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937044,,,train,sda-all,samples/GSE342709/GSM9937044,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937045,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4895,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.720850227085647,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937045,,,train,sda-all,samples/GSE342709/GSM9937045,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.79, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937046,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3694,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.544773251589129,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937046,,,train,sda-all,samples/GSE342709/GSM9937046,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.85, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937047,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3882,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.549219097406841,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937047,,,train,sda-all,samples/GSE342709/GSM9937047,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937048,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3453,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.549571299643031,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937048,,,train,sda-all,samples/GSE342709/GSM9937048,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937049,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3280,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.5458862706386745,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937049,,,train,sda-all,samples/GSE342709/GSM9937049,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937050,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3986,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.118909801960424,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937050,,,train,sda-all,samples/GSE342709/GSM9937050,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937051,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3571,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.119180275138686,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937051,,,train,sda-all,samples/GSE342709/GSM9937051,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937052,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3999,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.113205134214234,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937052,,,train,sda-all,samples/GSE342709/GSM9937052,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937053,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4020,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,5.113316481815729,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937053,,,train,sda-all,samples/GSE342709/GSM9937053,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937054,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4864,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.547040046510486,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937054,,,train,sda-all,samples/GSE342709/GSM9937054,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.88, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937055,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4908,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.3814357535374615,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937055,,,train,sda-all,samples/GSE342709/GSM9937055,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937056,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4604,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.3819217730972015,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937056,,,train,sda-all,samples/GSE342709/GSM9937056,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937057,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4981,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.381752293776277,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937057,,,train,sda-all,samples/GSE342709/GSM9937057,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937058,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4726,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.554718379978793,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937058,,,train,sda-all,samples/GSE342709/GSM9937058,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.81, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937059,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4525,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.374097115925372,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937059,,,train,sda-all,samples/GSE342709/GSM9937059,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.92, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937060,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4878,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.5556606878729315,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937060,,,train,sda-all,samples/GSE342709/GSM9937060,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937061,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4590,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.371434433771441,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937061,,,train,sda-all,samples/GSE342709/GSM9937061,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.71, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937062,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4499,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.380775792996989,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937062,,,train,sda-all,samples/GSE342709/GSM9937062,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937063,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4593,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.376559707358991,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937063,,,train,sda-all,samples/GSE342709/GSM9937063,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.77, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9937064,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4064,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.3786420652263365,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937064,,,train,sda-all,samples/GSE342709/GSM9937064,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9937065,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4098,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium],GSE342709,GSE342709,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Amygdala,,luna,,,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,36601,counts,um,1.0,verified,4.3763038604834605,PARTIAL,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937065,,,train,sda-all,samples/GSE342709/GSM9937065,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937425,brain,normal,,medial amygdaloid nucleus,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),508108,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium HD],GSE342738,GSE342738,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002892,Medial Amygdala,,luna,,,luna,not stated,,not stated,,GSE342738:Br8325,Br8325,fresh frozen,Fresh frozen,release v3,sequencing-based,VisiumHD,,,bin,37082,counts,um,1.0,verified,4.317673913517749,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937425,,,train,sda-all,samples/GSE342738/GSM9937425,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.75, ""uberon"": 0.61, ""life_stage"": 1.0}",,
GSM9937426,brain,normal,,central amygdaloid nucleus,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),690382,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium HD],GSE342738,GSE342738,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002883,Central Amygdala,,luna,,,luna,not stated,,not stated,,GSE342738:Br8325,Br8325,fresh frozen,Fresh frozen,release v3,sequencing-based,VisiumHD,,,bin,37082,counts,um,1.0,verified,4.090316546839667,UNRESOLVED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937426,,,train,sda-all,samples/GSE342738/GSM9937426,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.91, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9937427,brain,normal,,amygdala,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),556046,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium HD],GSE342738,GSE342738,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001876,Intercalated Amygdala,,luna,,,luna,not stated,,not stated,,GSE342738:Br9280,Br9280,fresh frozen,Fresh frozen,release v3,sequencing-based,VisiumHD,,,bin,37082,counts,um,1.0,verified,2.8570360511849295,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937427,,,train,sda-all,samples/GSE342738/GSM9937427,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 0.88, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9937428,brain,normal,,medial amygdaloid nucleus,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),628882,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium HD],GSE342738,GSE342738,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002892,Medial Amygdala,,luna,,,luna,not stated,,not stated,,GSE342738:Br9280,Br9280,fresh frozen,Fresh frozen,release v3,sequencing-based,VisiumHD,,,bin,37082,counts,um,1.0,verified,3.271267932435241,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937428,,,train,sda-all,samples/GSE342738/GSM9937428,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.6000000000000001, ""uberon"": 0.5700000000000001, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM9937429,brain,normal,,central amygdaloid nucleus,primary tissue,Homo sapiens,human,not stated,unknown,Visium HD,Visium HD,True,H&E-like (heuristic),605187,Multiscale spatial transcriptomics resolves the cellular and molecular architecture of the human amygdala [Visium HD],GSE342738,GSE342738,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002883,Central Amygdala,,luna,,,luna,not stated,,not stated,,GSE342738:Br9280,Br9280,fresh frozen,Fresh frozen,release v3,sequencing-based,VisiumHD,,,bin,37082,counts,um,1.0,verified,2.4327384041757654,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9937429,,,train,sda-all,samples/GSE342738/GSM9937429,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.76, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9942072,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,162857,"In situ targeted gene expression analysis of postnatal mouse cortex of LgDel model 22q11.2 deletion sydnrome, including treatment with antioxidant",GSE342913,GSE342913,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,fixed frozen,Fixed Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9942072,,,train,sda-all,samples/GSE342913/GSM9942072,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.72, ""uberon"": 0.98, ""life_stage"": 0.99}",,
GSM9942073,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,54343,"In situ targeted gene expression analysis of postnatal mouse cortex of LgDel model 22q11.2 deletion sydnrome, including treatment with antioxidant",GSE342913,GSE342913,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,fixed frozen,Fixed Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000205733095597,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9942073,,,train,sda-all,samples/GSE342913/GSM9942073,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9942074,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,217357,"In situ targeted gene expression analysis of postnatal mouse cortex of LgDel model 22q11.2 deletion sydnrome, including treatment with antioxidant",GSE342913,GSE342913,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,control,luna,not stated,,not stated,,,,fixed frozen,Fixed Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103476821192,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9942074,,,train,sda-all,samples/GSE342913/GSM9942074,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.93, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM9942075,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,84887,"In situ targeted gene expression analysis of postnatal mouse cortex of LgDel model 22q11.2 deletion sydnrome, including treatment with antioxidant",GSE342913,GSE342913,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,NAC,luna,not stated,,not stated,,,,fixed frozen,Fixed Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000012937949594,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9942075,,,train,sda-all,samples/GSE342913/GSM9942075,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.29, ""uberon"": 0.98, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9942076,brain,disease,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,195060,"In situ targeted gene expression analysis of postnatal mouse cortex of LgDel model 22q11.2 deletion sydnrome, including treatment with antioxidant",GSE342913,GSE342913,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,brain,,luna,,NAC,luna,not stated,,not stated,,,,fixed frozen,Fixed Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999920824400701,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9942076,,,train,sda-all,samples/GSE342913/GSM9942076,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.65, ""uberon"": 0.91, ""life_stage"": 0.97}",,
GSM9945415,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,False,,205397,Spatially Resolved Cell-Cell Communication in Small Cell Lung Cancer Reveals Macrophage-Driven Immune Evasion Programs,GSE343063,GSE343063,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0008433,luna,,None (treatment-naïve),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM9945415,,,train,sda-all,samples/GSE343063/GSM9945415,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9945416,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,117072,Spatially Resolved Cell-Cell Communication in Small Cell Lung Cancer Reveals Macrophage-Driven Immune Evasion Programs,GSE343063,GSE343063,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0008433,luna,,None (treatment-naïve),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999896694214876,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9945416,,,train,sda-all,samples/GSE343063/GSM9945416,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9945417,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,283748,Spatially Resolved Cell-Cell Communication in Small Cell Lung Cancer Reveals Macrophage-Driven Immune Evasion Programs,GSE343063,GSE343063,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0008433,luna,,None (treatment-naïve),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000064486174165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9945417,,,train,sda-all,samples/GSE343063/GSM9945417,sda-tissue-disease-2.3,"{""organ"": 0.96, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9945418,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,460746,Spatially Resolved Cell-Cell Communication in Small Cell Lung Cancer Reveals Macrophage-Driven Immune Evasion Programs,GSE343063,GSE343063,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0008433,luna,,None (treatment-naïve),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.4999912459413001,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9945418,,,train,sda-all,samples/GSE343063/GSM9945418,sda-tissue-disease-2.3,"{""organ"": 0.98, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9945419,lung,disease,small cell lung carcinoma,lung,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,396008,Spatially Resolved Cell-Cell Communication in Small Cell Lung Cancer Reveals Macrophage-Driven Immune Evasion Programs,GSE343063,GSE343063,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002048,lung,MONDO:0008433,luna,,None (treatment-naïve),luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,10029,counts,um,1.0,verified,0.5000077611631396,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9945419,,,train,sda-all,samples/GSE343063/GSM9945419,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9949642,head and neck,disease,head and neck squamous cell carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,354757,Multi-tissue gene expression in HNSCC,GSE343350,GSE343350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,larynx; hypopharynx,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999782248933017,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9949642,,,train,sda-all,samples/GSE343350/GSM9949642,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 0.33, ""disease_status"": 0.85, ""uberon"": 0.24, ""life_stage"": 1.0}",sample_kind;uberon,low_confidence_annotation
GSM9949643,head and neck,disease,head and neck squamous cell carcinoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,77787,Multi-tissue gene expression in HNSCC,GSE343350,GSE343350,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,larynx; hypopharynx,MONDO:0010150,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998964517465133,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9949643,,,train,sda-all,samples/GSE343350/GSM9949643,sda-tissue-disease-2.3,"{""organ"": 0.9500000000000001, ""sample_kind"": 0.42, ""disease_status"": 0.45, ""uberon"": 0.23, ""life_stage"": 1.0}",sample_kind;disease_status;uberon,low_confidence_annotation
GSM9950644,blood vessel,normal,,aorta,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,169679,Gelated Apoptotic Extracellular Vesicles via Enzyme-Instructed Self-Assembly with Multifunctional Microcapsule for Targeted Atherosclerosis Therapy,GSE343400,GSE343400,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000947,Aorta,,luna,,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,stereo_seq,,,bin,43696,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9950644,,,train,sda-all,samples/GSE343400/GSM9950644,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.15, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9950645,blood vessel,disease,atherosclerosis,aorta,primary tissue,Mus musculus,house mouse,not stated,unknown,Stereo-seq,Stereo-seq,False,,171373,Gelated Apoptotic Extracellular Vesicles via Enzyme-Instructed Self-Assembly with Multifunctional Microcapsule for Targeted Atherosclerosis Therapy,GSE343400,GSE343400,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000947,Aorta,MONDO:0005311,mondo_predicate (Luna: perturbation),,,luna,not stated,,not stated,,,,,,release v3,sequencing-based,stereo_seq,,,bin,46505,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9950645,,,train,sda-all,samples/GSE343400/GSM9950645,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.78, ""disease_status"": 0.33, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9963826,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),4019,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],GSE343862,GSE343862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,no MASLD,normal chow diet,age rule: age with unit,adult,38 week old,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31253,counts,um,1.0,verified,4.338661793706116,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963826,,,val,sda-all,samples/GSE343862/GSM9963826,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9963827,liver,normal,,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),3961,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],GSE343862,GSE343862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,,luna,no MASLD,normal chow diet,age rule: age with unit,adult,38 week old,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31253,counts,um,1.0,verified,4.437078385395416,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963827,,,val,sda-all,samples/GSE343862/GSM9963827,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9963828,liver,disease,metabolic dysfunction-associated steatohepatitis,liver,primary tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),3140,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],GSE343862,GSE343862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007027,luna,MASH,HHH diet,age rule: age with unit,adult,38 week old,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31253,counts,um,1.0,verified,4.200202334593781,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963828,,,val,sda-all,samples/GSE343862/GSM9963828,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9963829,liver,disease,hepatocellular carcinoma;metabolic dysfunction-associated steatotic liver disease,liver,tumour tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),3818,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],GSE343862,GSE343862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007256;MONDO:0013209,luna,MASLD-HCC,HHH diet,age rule: age with unit,adult,38 week old,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31253,counts,um,1.0,verified,4.338625717875368,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963829,,,val,sda-all,samples/GSE343862/GSM9963829,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.92, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9963830,liver,disease,hepatocellular carcinoma;metabolic dysfunction-associated steatotic liver disease,liver,tumour tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),3819,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],GSE343862,GSE343862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007256;MONDO:0013209,luna,MASLD-HCC,HHH diet,age rule: age with unit,adult,52 week old,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31253,counts,um,1.0,verified,4.477646518753786,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963830,,,val,sda-all,samples/GSE343862/GSM9963830,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9963831,liver,disease,hepatocellular carcinoma;metabolic dysfunction-associated steatotic liver disease,liver,tumour tissue,Mus musculus,house mouse,adult,male,Visium,Visium,True,H&E-like (heuristic),4113,Zonated Cholesterol Sensing by SIRT2 Drives MASLD-HCC [Spatial transcriptomics],GSE343862,GSE343862,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0002107,liver,MONDO:0007256;MONDO:0013209,luna,MASLD‑HCC with metastasis,HHH diet,age rule: age with unit,adult,52 week old,extracted field,male,,,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,31253,counts,um,1.0,verified,4.618603703717327,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9963831,,,val,sda-all,samples/GSE343862/GSM9963831,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.62, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9976580,plant,normal,,,primary tissue,Daucus carota,carrot,adult,unknown,Stereo-seq,Stereo-seq,False,,117940,A single-cell and spatial transcriptomic atlas provides insights into the genetic regulation of secondary growth and specialized metabolism in the carrot taproot [Spatial Transcriptomics],GSE344364,GSE344364,4039,Daucus carota,4039,,False,False,GEO organism field,Daucus carota,,luna,,Taproots,,luna,,,luna,adult,,not stated,,,,fresh frozen,OCT-embedded,release v3,sequencing-based,Stereo-seq,,,bin,27133,counts,um,1.0,verified,,,,,,,VERIFIED,PASS,,,,,GSM9976580,,,train,sda-all,samples/GSE344364/GSM9976580,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 0.63}",,
GSM9980504,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10546,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.699707772274859,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980504,,,train,sda-all,samples/GSE344506/GSM9980504,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980505,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4283,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.624044905490477,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980505,,,train,sda-all,samples/GSE344506/GSM9980505,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980506,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3287,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.670744769457283,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980506,,,train,sda-all,samples/GSE344506/GSM9980506,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980507,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2996,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Naive,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.624843300702095,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980507,,,train,sda-all,samples/GSE344506/GSM9980507,sda-tissue-disease-2.3,"{""organ"": 0.68, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980508,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7731,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Neg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.620670089658255,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980508,,,train,sda-all,samples/GSE344506/GSM9980508,sda-tissue-disease-2.3,"{""organ"": 0.75, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980509,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),6085,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Neg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.6694211287857605,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980509,,,train,sda-all,samples/GSE344506/GSM9980509,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980510,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),8546,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Naive,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.619882502652594,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980510,,,train,sda-all,samples/GSE344506/GSM9980510,sda-tissue-disease-2.3,"{""organ"": 0.71, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980511,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10018,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Neg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.671169331873407,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980511,,,train,sda-all,samples/GSE344506/GSM9980511,sda-tissue-disease-2.3,"{""organ"": 0.52, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9980512,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4153,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Neg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.619287380933359,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980512,,,train,sda-all,samples/GSE344506/GSM9980512,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980513,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4732,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.622992875587217,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980513,,,train,sda-all,samples/GSE344506/GSM9980513,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980514,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3225,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Naive,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.623317525390845,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980514,,,train,sda-all,samples/GSE344506/GSM9980514,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980515,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7935,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Naive,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.713720960987042,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980515,,,train,sda-all,samples/GSE344506/GSM9980515,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980516,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2913,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Neg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.62280465771869,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980516,,,train,sda-all,samples/GSE344506/GSM9980516,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980517,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4319,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.618857489978507,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980517,,,train,sda-all,samples/GSE344506/GSM9980517,sda-tissue-disease-2.3,"{""organ"": 0.86, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980518,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12388,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Naive,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.621908726999012,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980518,,,train,sda-all,samples/GSE344506/GSM9980518,sda-tissue-disease-2.3,"{""organ"": 0.4, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9980519,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),11536,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.6711497193751494,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980519,,,train,sda-all,samples/GSE344506/GSM9980519,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980520,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),5117,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Naive,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.620430767847997,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980520,,,train,sda-all,samples/GSE344506/GSM9980520,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980521,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7704,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.617738687570747,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980521,,,train,sda-all,samples/GSE344506/GSM9980521,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980522,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10497,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.621322313607839,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980522,,,train,sda-all,samples/GSE344506/GSM9980522,sda-tissue-disease-2.3,"{""organ"": 0.61, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980523,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4575,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Naive,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.672642104555541,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980523,,,train,sda-all,samples/GSE344506/GSM9980523,sda-tissue-disease-2.3,"{""organ"": 0.59, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9980524,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7181,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Naive,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.717060276952635,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980524,,,train,sda-all,samples/GSE344506/GSM9980524,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980525,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7086,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.668040203843306,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980525,,,train,sda-all,samples/GSE344506/GSM9980525,sda-tissue-disease-2.3,"{""organ"": 0.73, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980526,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10770,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.6467169146536795,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980526,,,train,sda-all,samples/GSE344506/GSM9980526,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980527,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),13594,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Neg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.718955174945757,FAILED,ABSENT,ABSENT,,,VERIFIED,PASS,registration correct (acceptance too strict),,,,GSM9980527,,,train,sda-all,samples/GSE344506/GSM9980527,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980528,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4394,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Neg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.648510005866487,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980528,,,train,sda-all,samples/GSE344506/GSM9980528,sda-tissue-disease-2.3,"{""organ"": 0.7000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980529,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12451,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Naive,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.7187977199433435,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,looks somewhat odd,,,GSM9980529,,,train,sda-all,samples/GSE344506/GSM9980529,sda-tissue-disease-2.3,"{""organ"": 0.6000000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980530,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),4171,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Neg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.6725934056196845,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980530,,,train,sda-all,samples/GSE344506/GSM9980530,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980531,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),9181,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.696788581112594,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980531,,,train,sda-all,samples/GSE344506/GSM9980531,sda-tissue-disease-2.3,"{""organ"": 0.46, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9980532,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10347,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Neg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.669781432396223,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980532,,,train,sda-all,samples/GSE344506/GSM9980532,sda-tissue-disease-2.3,"{""organ"": 0.8, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980533,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),10752,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Exp,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.6209249239509775,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980533,,,train,sda-all,samples/GSE344506/GSM9980533,sda-tissue-disease-2.3,"{""organ"": 0.63, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9980534,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),7931,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Pos_ART_Naive,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.706544220886225,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980534,,,train,sda-all,samples/GSE344506/GSM9980534,sda-tissue-disease-2.3,"{""organ"": 0.51, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": NaN, ""life_stage"": 1.0}",organ,low_confidence_annotation
GSM9980535,unknown,disease,diffuse large B-cell lymphoma,,tumour tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),13601,Spatial Transcriptomics to Investigate the Impact of HIV/ART on DLBCL Tumorigenesis and Tumor Microenvironment,GSE344506,GSE344506,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,DLBCL Biopsy,MONDO:0018905,luna,,HIV_Neg,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,4.668967241026095,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9980535,,,train,sda-all,samples/GSE344506/GSM9980535,sda-tissue-disease-2.3,"{""organ"": 0.67, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": NaN, ""life_stage"": 1.0}",,
GSM9981854,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,967159,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,GSE344584,GSE344584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0008170,luna,,,age rule: bare number read as years,adult,57,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499998783987548,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981854,,,train,sda-all,samples/GSE344584/GSM9981854,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 0.89, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9981855,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,727925,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,GSE344584,GSE344584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0008170,luna,,,age rule: bare number read as years,adult,54,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000103589654119,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981855,,,train,sda-all,samples/GSE344584/GSM9981855,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.87, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9981856,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,437136,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,GSE344584,GSE344584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0008170,luna,,,age rule: bare number read as years,adult,53,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999896387749761,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981856,,,train,sda-all,samples/GSE344584/GSM9981856,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 0.8300000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9981857,lymph node,disease,ovarian cancer,lymph node,metastasis,Homo sapiens,human,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,1101585,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,GSE344584,GSE344584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000029,Lymph node,MONDO:0008170,luna,,,age rule: bare number read as years,adult,45,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999891257068285,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981857,,,train,sda-all,samples/GSE344584/GSM9981857,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 0.92, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9981858,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,adult,unknown,Xenium,Xenium,True,fluorescence: DAPI,703019,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,GSE344584,GSE344584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0008170,luna,,,age rule: bare number read as years,adult,59,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000087070091424,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981858,,,train,sda-all,samples/GSE344584/GSM9981858,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.79, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM9981859,other,disease,ovarian cancer,fallopian tube,tumour tissue,Homo sapiens,human,aged,unknown,Xenium,Xenium,True,fluorescence: DAPI,716027,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,GSE344584,GSE344584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0003889,Fallopian tube,MONDO:0008170,luna,,,age rule: bare number read as years,aged,77,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998906333543963,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981859,,,train,sda-all,samples/GSE344584/GSM9981859,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 0.78, ""disease_status"": 0.99, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM9981860,ovary,disease,ovarian cancer,ovary,tumour tissue,Homo sapiens,human,aged,unknown,Xenium,Xenium,True,fluorescence: DAPI,388133,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,GSE344584,GSE344584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000992,Ovary,MONDO:0008170,luna,,,age rule: bare number read as years,aged,66,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999929104314821,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981860,,,train,sda-all,samples/GSE344584/GSM9981860,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.6900000000000001, ""disease_status"": 0.97, ""uberon"": 0.92, ""life_stage"": 1.0}",,
GSM9981861,unknown,disease,ovarian cancer,,unknown,Homo sapiens,human,aged,unknown,Xenium,Xenium,True,fluorescence: DAPI,724177,Olaparib plus tremelimumab in women with recurrent ovarian cancer and a germline BRCA1 or BRCA2 mutation: a phase I/II study,GSE344584,GSE344584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,,,MONDO:0008170,luna,,,age rule: bare number read as years,aged,68,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998843832148765,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM9981861,,,train,sda-all,samples/GSE344584/GSM9981861,sda-tissue-disease-2.3,"{""organ"": 0.77, ""sample_kind"": 0.47000000000000003, ""disease_status"": 0.77, ""uberon"": NaN, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9982017,testis,disease,disorder of sexual differentiation;cryptorchidism,testis,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,False,,3929,Spatial transcriptomic landscape of protein-coding genes in descended and undescended testes of dogs with unilateral cryptorchidism,GSE344594,GSE344594,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0000473,testis,MONDO:0002145;MONDO:0009047,luna,,abdominally retained testis; unilateral cryptorchidism with disorder of sex development,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Visium,,,spot,27046,counts,um,1.0,verified,,PARTIAL,ABSENT,ABSENT,,,VERIFIED,FAIL,image misaligned with cells / spots,not aligned at all,,,GSM9982017,,,val,sda-all,samples/GSE344594/GSM9982017,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.97, ""life_stage"": 1.0}",,
GSM9982018,testis,disease,male reproductive system disorder,testis,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,False,,4731,Spatial transcriptomic landscape of protein-coding genes in descended and undescended testes of dogs with unilateral cryptorchidism,GSE344594,GSE344594,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0000473,testis,MONDO:0003150,luna,,contralateral descended testis from dog with abdominal cryptorchidism,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Visium,,,spot,27046,counts,um,1.0,verified,,PARTIAL,ABSENT,ABSENT,,,VERIFIED,FAIL,image misaligned with cells / spots,not aligned at all,,,GSM9982018,,,val,sda-all,samples/GSE344594/GSM9982018,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.39, ""uberon"": 1.0, ""life_stage"": 0.9500000000000001}",disease_status,low_confidence_annotation
GSM9982019,testis,disease,cryptorchidism,testis,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,False,,4136,Spatial transcriptomic landscape of protein-coding genes in descended and undescended testes of dogs with unilateral cryptorchidism,GSE344594,GSE344594,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0000473,testis,MONDO:0009047,luna,,inguinally retained testis; isolated unilateral cryptorchidism,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Visium,,,spot,27046,counts,um,1.0,verified,,PARTIAL,ABSENT,ABSENT,,,VERIFIED,FAIL,image misaligned with cells / spots,not aligned at all,,,GSM9982019,,,val,sda-all,samples/GSE344594/GSM9982019,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.96, ""uberon"": 0.97, ""life_stage"": 0.98}",,
GSM9982020,testis,disease,male reproductive system disorder,testis,primary tissue,Canis lupus familiaris,dog,not stated,unknown,Visium,Visium,False,,4273,Spatial transcriptomic landscape of protein-coding genes in descended and undescended testes of dogs with unilateral cryptorchidism,GSE344594,GSE344594,9615,Canis lupus familiaris,9615,,False,False,GEO organism field,Canis lupus familiaris,Canis lupus familiaris,luna,UBERON:0000473,testis,MONDO:0003150,luna,,contralateral descended testis from dog with inguinal cryptorchidism,luna,not stated,,not stated,,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,Visium,,,spot,27046,counts,um,1.0,verified,,PARTIAL,ABSENT,ABSENT,,,VERIFIED,FAIL,image misaligned with cells / spots,not aligned at all,,,GSM9982020,,,val,sda-all,samples/GSE344594/GSM9982020,sda-tissue-disease-2.5,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.53, ""uberon"": 0.99, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9983337,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,62731,Placental TRPV2 supports trophoblast function and normal fetal development [MERSCOPE],GSE344692,GSE344692,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001987,Placenta,,luna,,Trpv2-/-,age rule: embryonic day,embryonic,E16.5,extracted field,female,,,,,release v3,imaging-based,MERscope,,,cell,350,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9983337,,,train,sda-all,samples/GSE344692/GSM9983337,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM9983338,placenta,normal,,placenta,primary tissue,Mus musculus,house mouse,embryonic,female,MERFISH/MERSCOPE,MERSCOPE,False,,53250,Placental TRPV2 supports trophoblast function and normal fetal development [MERSCOPE],GSE344692,GSE344692,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001987,Placenta,,luna,,Trpv2+/+,age rule: embryonic day,embryonic,E16.5,extracted field,female,,,,,release v3,imaging-based,MERscope,,,cell,350,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9983338,,,train,sda-all,samples/GSE344692/GSM9983338,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.84, ""uberon"": 0.99, ""life_stage"": 0.6000000000000001}",,
GSM9983339,placenta,perturbation,,placenta,primary tissue,Mus musculus,house mouse,embryonic,male,MERFISH/MERSCOPE,MERSCOPE,False,,52896,Placental TRPV2 supports trophoblast function and normal fetal development [MERSCOPE],GSE344692,GSE344692,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0001987,Placenta,,luna,,Trpv2-/-,age rule: embryonic day,embryonic,E16.5,extracted field,male,,,,,release v3,imaging-based,MERscope,,,cell,350,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9983339,,,train,sda-all,samples/GSE344692/GSM9983339,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.66}",,
GSM9983340,embryo (whole),normal,,conceptus,primary tissue,Mus musculus,house mouse,embryonic,unknown,MERFISH/MERSCOPE,MERSCOPE,False,,180374,Placental TRPV2 supports trophoblast function and normal fetal development [MERSCOPE],GSE344692,GSE344692,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0004716,Whole conceptus,,luna,,Trpv2+/+,age rule: embryonic day,embryonic,E9.5,not stated,,,,,,release v3,imaging-based,MERscope,,,cell,350,counts,um,1.0,verified,,,,,,,VERIFIED,,,,,,GSM9983340,,,train,sda-all,samples/GSE344692/GSM9983340,sda-tissue-disease-2.3,"{""organ"": 0.6900000000000001, ""sample_kind"": 0.51, ""disease_status"": 0.67, ""uberon"": 0.92, ""life_stage"": 1.0}",sample_kind,low_confidence_annotation
GSM9984135,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,31897,REM sleep readiness and duration are encoded during NREM by spinal-projecting sublaterodorsal (SLD) neurons.,GSE344748,GSE344748,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,AAV-retro-EGFP in cervical spinal cord,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,slide_seq,,,bead,32894,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9984135,,,val,sda-all,samples/GSE344748/GSM9984135,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.48, ""uberon"": 0.96, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9984136,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,43657,REM sleep readiness and duration are encoded during NREM by spinal-projecting sublaterodorsal (SLD) neurons.,GSE344748,GSE344748,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,AAV-retro-EGFP in cervical spinal cord,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,slide_seq,,,bead,32894,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9984136,,,val,sda-all,samples/GSE344748/GSM9984136,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.43, ""uberon"": 0.97, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9984137,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,19437,REM sleep readiness and duration are encoded during NREM by spinal-projecting sublaterodorsal (SLD) neurons.,GSE344748,GSE344748,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,AAV-retro-EGFP in cervical spinal cord,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,slide_seq,,,bead,32894,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9984137,,,val,sda-all,samples/GSE344748/GSM9984137,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.41000000000000003, ""uberon"": 0.97, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM9984138,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Slide-seq,Slide-seq,False,,54654,REM sleep readiness and duration are encoded during NREM by spinal-projecting sublaterodorsal (SLD) neurons.,GSE344748,GSE344748,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,,luna,UBERON:0000955,Brain,,luna,,AAV-retro-EGFP in cervical spinal cord,luna,not stated,,not stated,,,,fresh frozen,Fresh frozen,release v3,sequencing-based,slide_seq,,,bead,32894,counts,pixel,,unresolved,,,,,,,VERIFIED,,,,,,GSM9984138,,,val,sda-all,samples/GSE344748/GSM9984138,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.49, ""uberon"": 0.98, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM9989019,blood vessel,disease,calcinosis,coronary artery,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3026,Spatial transcriptomic profiling of calcified human coronary artery lesions,GSE344969,GSE344969,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,coronary artery,MONDO:0002123,luna,,vascular calcification,age rule: age in years,aged,85 years,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.778412705167272,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9989019,,,train,sda-all,samples/GSE344969/GSM9989019,sda-tissue-disease-2.3,"{""organ"": 0.97, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM9989020,blood vessel,disease,calcinosis,coronary artery,primary tissue,Homo sapiens,human,aged,male,Visium,Visium,True,H&E,3112,Spatial transcriptomic profiling of calcified human coronary artery lesions,GSE344969,GSE344969,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001621,coronary artery,MONDO:0002123,luna,,vascular calcification,age rule: age in years,aged,85 years,extracted field,male,,,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,18085,counts,um,1.0,verified,5.099333578007554,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM9989020,,,train,sda-all,samples/GSE344969/GSM9989020,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10000911,eye,perturbation,,eye,primary tissue,Mus musculus,house mouse,juvenile,unknown,Xenium,Xenium,True,fluorescence: DAPI,37071,Gene expression mapping of eye after adipocyte depletion,GSE345289,GSE345289,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000970,Eye,,luna,,7 weeks DT injection,luna,juvenile,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.4999912364563416,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10000911,,,val,sda-all,samples/GSE345289/GSM10000911,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM10000912,eye,perturbation,,eye,primary tissue,Mus musculus,house mouse,juvenile,unknown,Xenium,Xenium,True,fluorescence: DAPI,60468,Gene expression mapping of eye after adipocyte depletion,GSE345289,GSE345289,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000970,Eye,,luna,,7 weeks DT injection,luna,juvenile,,not stated,,,,fresh frozen,Fresh frozen,release v3,imaging-based,Xenium,,,cell,13780,counts,um,1.0,verified,0.49999840906198295,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10000912,,,val,sda-all,samples/GSE345289/GSM10000912,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.65, ""life_stage"": 0.98}",,
GSM10001168,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,701075,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,GSE345302,GSE345302,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,NDMM,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000109670501073,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001168,,,train,sda-all,samples/GSE345302/GSM10001168,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10001169,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,15152,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,GSE345302,GSE345302,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,NDMM,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999890934473434,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001169,,,train,sda-all,samples/GSE345302/GSM10001169,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10001170,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,971259,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,GSE345302,GSE345302,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,CBM,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999890934473434,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001170,,,train,sda-all,samples/GSE345302/GSM10001170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 1.0, ""uberon"": 0.98, ""life_stage"": 1.0}",,
GSM10001171,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,135364,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,GSE345302,GSE345302,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,CBM,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000045278137129,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001171,,,train,sda-all,samples/GSE345302/GSM10001171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10001172,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,781716,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,GSE345302,GSE345302,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,NDMM,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000063285313204,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001172,,,train,sda-all,samples/GSE345302/GSM10001172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10001173,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,435167,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,GSE345302,GSE345302,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,CBM,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000086345843886,VERIFIED,VERIFIED,VERIFIED,,zero_count_observations,VERIFIED,PASS,,,42678098,,GSM10001173,,,train,sda-all,samples/GSE345302/GSM10001173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.91, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10001174,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,721958,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,GSE345302,GSE345302,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,SMM,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.499999455005232,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001174,,,train,sda-all,samples/GSE345302/GSM10001174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10001175,bone marrow,disease,plasma cell myeloma,bone marrow,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,152039,Spatial profiling identifies a distinct and topographically-defined tumor microenvironment that emerges during multiple myeloma evolution,GSE345302,GSE345302,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0002371,Bone marrow,MONDO:0009693,luna,RRMM,Triple class exposed,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999827332166874,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,42678098,,GSM10001175,,,train,sda-all,samples/GSE345302/GSM10001175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10002162,brain,normal,,brain,primary tissue,Mesocricetus auratus,golden hamster,adult,female,Xenium,Xenium,False,,486207,A single-nucleus and spatial transcriptomic atlas of the Syrian hamster preoptic area across hibernation states,GSE345359,GSE345359,10036,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,,luna,UBERON:0000955,Brain,,luna,,wild type,luna,adult,7 months,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,mHamster_MPN_100g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM10002162,,,train,sda-all,samples/GSE345359/GSM10002162,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM10002163,brain,normal,,brain,primary tissue,Mesocricetus auratus,golden hamster,adult,female,Xenium,Xenium,False,,460753,A single-nucleus and spatial transcriptomic atlas of the Syrian hamster preoptic area across hibernation states,GSE345359,GSE345359,10036,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,,luna,UBERON:0000955,Brain,,luna,,wild type,luna,adult,7 months,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,mHamster_MPN_100g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM10002163,,,train,sda-all,samples/GSE345359/GSM10002163,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 0.99}",,
GSM10002164,brain,normal,,brain,primary tissue,Mesocricetus auratus,golden hamster,adult,female,Xenium,Xenium,False,,498713,A single-nucleus and spatial transcriptomic atlas of the Syrian hamster preoptic area across hibernation states,GSE345359,GSE345359,10036,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,,luna,UBERON:0000955,Brain,,luna,,wild type,luna,adult,7 months,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,mHamster_MPN_100g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,,ABSENT,VERIFIED,VERIFIED,,,VERIFIED,,,,,,GSM10002164,,,train,sda-all,samples/GSE345359/GSM10002164,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.93, ""life_stage"": 0.98}",,
GSM10002165,brain,normal,,brain,primary tissue,Mesocricetus auratus,golden hamster,adult,female,Xenium,Xenium,True,fluorescence: DAPI,510268,A single-nucleus and spatial transcriptomic atlas of the Syrian hamster preoptic area across hibernation states,GSE345359,GSE345359,10036,Mesocricetus auratus,10036,,False,False,GEO organism field,Mesocricetus auratus,,luna,UBERON:0000955,Brain,,luna,,wild type,luna,adult,7 months,extracted field,female,,,FFPE,FFPE,release v3,imaging-based,Xenium,mHamster_MPN_100g,xenium-3.2.0.7,cell,541,counts,um,1.0,verified,0.5000037796976241,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10002165,,,train,sda-all,samples/GSE345359/GSM10002165,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9500000000000001, ""life_stage"": 0.97}",,
GSM10012170,heart,disease,,heart right ventricle,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,154475,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],GSE345643,GSE345643,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002080,right ventricle (transmural),,luna,,NF; pRV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,477,counts,um,1.0,verified,0.49999021909233177,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012170,,,test,sda-all,samples/GSE345643/GSM10012170,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.33, ""uberon"": 1.0, ""life_stage"": 0.99}",disease_status,low_confidence_annotation
GSM10012171,heart,disease,,heart right ventricle,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,190058,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],GSE345643,GSE345643,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002080,right ventricle (transmural),,luna,,pRV,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,477,counts,um,1.0,verified,0.49998964517465133,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012171,,,test,sda-all,samples/GSE345643/GSM10012171,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.56, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM10012172,heart,normal,,heart right ventricle,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,83406,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],GSE345643,GSE345643,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002080,right ventricle (transmural),,luna,,NF,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,477,counts,um,1.0,verified,0.5000025883936429,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012172,,,test,sda-all,samples/GSE345643/GSM10012172,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM10012173,heart,disease,,heart right ventricle,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,31017,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],GSE345643,GSE345643,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002080,right ventricle (transmural),,luna,,RVF,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,477,counts,um,1.0,verified,0.5000143266475644,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012173,,,test,sda-all,samples/GSE345643/GSM10012173,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10012174,heart,disease,,heart right ventricle,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,97493,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],GSE345643,GSE345643,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002080,right ventricle (transmural),,luna,,RVF,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,477,counts,um,1.0,verified,0.5000087199162888,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012174,,,test,sda-all,samples/GSE345643/GSM10012174,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10012175,heart,disease,,heart right ventricle,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,68856,Human Adult and Pediatric Multimodal Transcriptomic Atlas of Progression from Pressure-Loaded to Failing Right Ventricle [Xenium spatial transcriptomics],GSE345643,GSE345643,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,,luna,UBERON:0002080,right ventricle (transmural),,luna,,RVF,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,477,counts,um,1.0,verified,0.4999844870380585,VERIFIED,ABSENT,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012175,,,test,sda-all,samples/GSE345643/GSM10012175,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.8300000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10012265,bladder,normal,,urinary bladder,primary tissue,Homo sapiens,human,aged,male,Xenium,Xenium,True,fluorescence: DAPI,89585,Human bladder cell spatial mapping [Xenium],GSE345644,GSE345644,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001255,Bladder,,luna,,,age rule: bare number read as years,aged,71,extracted field,male,,,FFPE,FFPE,release v3,imaging-based,Xenium,hLung_480g,xenium-3.3.0.1,cell,541,counts,um,1.0,verified,0.4999834724402942,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10012265,,,val,sda-all,samples/GSE345644/GSM10012265,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.98, ""disease_status"": 0.31, ""uberon"": 1.0, ""life_stage"": 1.0}",disease_status,low_confidence_annotation
GSM10013104,peripheral nerve,disease,acoustic neuroma;NF2-related schwannomatosis,nerve,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,246812,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,GSE345691,GSE345691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001021,vestibular schwannoma,MONDO:0001569;MONDO:0007039,luna,,NF2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999887471867967,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013104,,,train,sda-all,samples/GSE345691/GSM10013104,sda-tissue-disease-2.3,"{""organ"": 0.84, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.66, ""life_stage"": 1.0}",,
GSM10013105,peripheral nerve,disease,acoustic neuroma;NF2-related schwannomatosis,nerve,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,180115,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,GSE345691,GSE345691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001021,vestibular schwannoma,MONDO:0001569;MONDO:0007039,luna,,NF2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000135135135135,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013105,,,train,sda-all,samples/GSE345691/GSM10013105,sda-tissue-disease-2.3,"{""organ"": 0.91, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.72, ""life_stage"": 1.0}",,
GSM10013106,peripheral nerve,disease,acoustic neuroma;NF2-related schwannomatosis,nerve,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,114672,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,GSE345691,GSE345691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001021,vestibular schwannoma,MONDO:0001569;MONDO:0007039,luna,,NF2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999905061106124,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013106,,,train,sda-all,samples/GSE345691/GSM10013106,sda-tissue-disease-2.3,"{""organ"": 0.8300000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.9, ""life_stage"": 1.0}",,
GSM10013107,peripheral nerve,disease,acoustic neuroma;NF2-related schwannomatosis,nerve,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,148575,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,GSE345691,GSE345691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001021,vestibular schwannoma,MONDO:0001569;MONDO:0007039,luna,,NF2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49998970157451483,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013107,,,train,sda-all,samples/GSE345691/GSM10013107,sda-tissue-disease-2.3,"{""organ"": 0.87, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.8200000000000001, ""life_stage"": 1.0}",,
GSM10013108,peripheral nerve,disease,acoustic neuroma;NF2-related schwannomatosis,nerve,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,152502,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,GSE345691,GSE345691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001021,vestibular schwannoma,MONDO:0001569;MONDO:0007039,luna,,NF2,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999926114197885,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013108,,,train,sda-all,samples/GSE345691/GSM10013108,sda-tissue-disease-2.3,"{""organ"": 0.8200000000000001, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.84, ""life_stage"": 1.0}",,
GSM10013109,peripheral nerve,disease,acoustic neuroma,nerve,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,181878,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,GSE345691,GSE345691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001021,vestibular schwannoma,MONDO:0001569,luna,,Sporadic,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.4999840561224489,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013109,,,train,sda-all,samples/GSE345691/GSM10013109,sda-tissue-disease-2.3,"{""organ"": 0.89, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM10013110,peripheral nerve,disease,acoustic neuroma,nerve,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,81967,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,GSE345691,GSE345691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001021,vestibular schwannoma,MONDO:0001569,luna,,Sporadic,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500019603796946,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013110,,,train,sda-all,samples/GSE345691/GSM10013110,sda-tissue-disease-2.3,"{""organ"": 0.93, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.86, ""life_stage"": 1.0}",,
GSM10013111,peripheral nerve,disease,acoustic neuroma,nerve,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,132739,Functional Merlin Depletion Defines a TEAD1-Dependent Tumor Cell State that Promotes Schwannoma Progression: Xenium spatial transcriptomics,GSE345691,GSE345691,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0001021,vestibular schwannoma,MONDO:0001569,luna,,Sporadic,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000056348610068,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10013111,,,train,sda-all,samples/GSE345691/GSM10013111,sda-tissue-disease-2.3,"{""organ"": 0.9400000000000001, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.76, ""life_stage"": 1.0}",,
GSM10024480,skin,disease,hidradenitis suppurativa,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2942,Distinct IL‑17A and retinoic acid–associated gene programs are enriched in epithelialized tunnels in severe hidradenitis suppurativa.,GSE346090,GSE346090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,HS lesional skin,MONDO:0006559,luna,,,luna,not stated,,not stated,,GSE346090:HS1,HS1,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,62710,counts,um,1.0,verified,4.55810433909172,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10024480,,,test,sda-all,samples/GSE346090/GSM10024480,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM10024481,skin,disease,hidradenitis suppurativa,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3293,Distinct IL‑17A and retinoic acid–associated gene programs are enriched in epithelialized tunnels in severe hidradenitis suppurativa.,GSE346090,GSE346090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,HS lesional skin,MONDO:0006559,luna,,,luna,not stated,,not stated,,GSE346090:HS2,HS2,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,62710,counts,um,1.0,verified,4.723707128998128,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10024481,,,test,sda-all,samples/GSE346090/GSM10024481,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.54, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM10024482,skin,disease,hidradenitis suppurativa,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),2434,Distinct IL‑17A and retinoic acid–associated gene programs are enriched in epithelialized tunnels in severe hidradenitis suppurativa.,GSE346090,GSE346090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,HS lesional skin,MONDO:0006559,luna,,,luna,not stated,,not stated,,GSE346090:HS3,HS3,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,62710,counts,um,1.0,verified,4.557410862323747,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10024482,,,test,sda-all,samples/GSE346090/GSM10024482,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.58, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM10024483,skin,disease,hidradenitis suppurativa,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),3250,Distinct IL‑17A and retinoic acid–associated gene programs are enriched in epithelialized tunnels in severe hidradenitis suppurativa.,GSE346090,GSE346090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,HS lesional skin,MONDO:0006559,luna,,,luna,not stated,,not stated,,GSE346090:HS4,HS4,fresh frozen,Fresh frozen,release v3,sequencing-based,Visium,,,spot,62710,counts,um,1.0,verified,4.679794996243756,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10024483,,,test,sda-all,samples/GSE346090/GSM10024483,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.44, ""life_stage"": 1.0}",uberon,low_confidence_annotation
GSM10024484,skin,disease,hidradenitis suppurativa,zone of skin,primary tissue,Homo sapiens,human,not stated,unknown,Visium,Visium,True,H&E-like (heuristic),12911,Distinct IL‑17A and retinoic acid–associated gene programs are enriched in epithelialized tunnels in severe hidradenitis suppurativa.,GSE346090,GSE346090,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000014,HS lesional skin,MONDO:0006559,luna,,,luna,not stated,,not stated,,GSE346090:HS5,HS5,FFPE,FFPE,release v3,sequencing-based,Visium,,,spot,37082,counts,um,1.0,verified,4.6664288377315115,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10024484,,,test,sda-all,samples/GSE346090/GSM10024484,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.63, ""life_stage"": 1.0}",,
GSM10039417,lymph node,disease,COVID-19,mediastinal lymph node,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,2155761,Spatial compartmentalization shapes distinct germinal center states during respiratory viral infection,GSE346722,GSE346722,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002524,mediastinal lymph node,MONDO:0100096,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.500003810477725,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10039417,,,val,sda-all,samples/GSE346722/GSM10039417,sda-tissue-disease-2.4,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,feature_species_differs
GSM10039418,lymph node,disease,COVID-19,mediastinal lymph node,primary tissue,Macaca fascicularis,crab-eating macaque,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,1859898,Spatial compartmentalization shapes distinct germinal center states during respiratory viral infection,GSE346722,GSE346722,9541,Macaca fascicularis,9541,,False,False,GEO organism field,Macaca fascicularis,Homo sapiens,luna,UBERON:0002524,mediastinal lymph node,MONDO:0100096,luna,,,luna,not stated,,not stated,,,,FFPE,FFPE,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000074812393537,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10039418,,,val,sda-all,samples/GSE346722/GSM10039418,sda-tissue-disease-2.4,"{""organ"": 0.99, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.98}",,feature_species_differs
GSM10058081,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3447,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,aged,,extracted field,male,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.384874889094179,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058081,,,test,sda-all,samples/GSE347650/GSM10058081,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10058082,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3504,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,aged,,extracted field,male,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.385586278654619,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058082,,,test,sda-all,samples/GSE347650/GSM10058082,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10058083,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,3232,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,aged,,extracted field,male,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.384434500550177,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058083,,,test,sda-all,samples/GSE347650/GSM10058083,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10058084,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,male,Visium,Visium,True,H&E,2940,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,aged,,extracted field,male,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.384083236463523,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058084,,,test,sda-all,samples/GSE347650/GSM10058084,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10058085,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,female,Visium,Visium,True,H&E,3064,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,aged,,extracted field,female,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.0233202635874585,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058085,,,test,sda-all,samples/GSE347650/GSM10058085,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10058086,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,female,Visium,Visium,True,H&E,2920,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,aged,,extracted field,female,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.0264236248204295,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058086,,,test,sda-all,samples/GSE347650/GSM10058086,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10058087,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,female,Visium,Visium,True,H&E,3038,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,aged,,extracted field,female,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.03833887961473,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058087,,,test,sda-all,samples/GSE347650/GSM10058087,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10058088,brain,normal,,brain,primary tissue,Mus musculus,house mouse,aged,female,Visium,Visium,True,H&E,3114,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,aged,,extracted field,female,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.038221007651808,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058088,,,test,sda-all,samples/GSE347650/GSM10058088,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10058089,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3709,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,not stated,,extracted field,male,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.049941055614598,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058089,,,test,sda-all,samples/GSE347650/GSM10058089,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM10058090,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3433,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,not stated,,extracted field,male,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.052271088373272,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058090,,,test,sda-all,samples/GSE347650/GSM10058090,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.52}",life_stage,low_confidence_annotation
GSM10058091,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3198,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,not stated,,extracted field,male,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.047587604526553,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058091,,,test,sda-all,samples/GSE347650/GSM10058091,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 0.65}",,
GSM10058092,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,male,Visium,Visium,True,H&E,3037,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,not stated,,extracted field,male,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.384080039989511,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058092,,,test,sda-all,samples/GSE347650/GSM10058092,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.71}",,
GSM10058093,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3363,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,not stated,,extracted field,female,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.043561701703319,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058093,,,test,sda-all,samples/GSE347650/GSM10058093,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.74}",,
GSM10058094,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,3139,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,not stated,,extracted field,female,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.037089512292712,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058094,,,test,sda-all,samples/GSE347650/GSM10058094,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 0.72}",,
GSM10058095,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,2936,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,not stated,,extracted field,female,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.039120213000088,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058095,,,test,sda-all,samples/GSE347650/GSM10058095,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 0.99, ""life_stage"": 0.85}",,
GSM10058096,brain,normal,,brain,primary tissue,Mus musculus,house mouse,not stated,female,Visium,Visium,True,H&E,2678,Aging-Related Cellular and Molecular Changes Reveal a Role for Bglap3+ Neurons in MEC Spatial Cognition,GSE347650,GSE347650,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,no treatment,luna,not stated,,extracted field,female,,,fresh frozen,Fresh-frozen,release v3,sequencing-based,visium,,,spot,32285,counts,um,1.0,verified,4.0444179770596955,VERIFIED,ABSENT,ABSENT,,,VERIFIED,PASS,,,,,GSM10058096,,,test,sda-all,samples/GSE347650/GSM10058096,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.78}",,
GSM10073652,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,171924,Xenium In Situ Spatial Perturb-Seq: Single-cell Functional Genomics of the Mouse Brain,GSE348514,GSE348514,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Injected,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.5000043094532165,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10073652,,,train,sda-all,samples/GSE348514/GSM10073652,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10073653,brain,perturbation,,brain,primary tissue,Mus musculus,house mouse,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,201587,Xenium In Situ Spatial Perturb-Seq: Single-cell Functional Genomics of the Mouse Brain,GSE348514,GSE348514,10090,Mus musculus,10090,,False,False,GEO organism field,Mus musculus,Mus musculus,luna,UBERON:0000955,Brain,,luna,,Injected,luna,not stated,,not stated,,,,fresh frozen,Fresh Frozen,release v3,imaging-based,Xenium,,,cell,541,counts,um,1.0,verified,0.49999363665287944,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10073653,,,train,sda-all,samples/GSE348514/GSM10073653,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.97, ""uberon"": 0.99, ""life_stage"": 1.0}",,
GSM10075604,breast,disease,ductal breast carcinoma in situ,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,222249,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0005023,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000128945739634,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075604,,,test,sda-all,samples/GSE348584/GSM10075604,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075605,breast,disease,ductal breast carcinoma in situ,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,57248,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0005023,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000279050640348,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075605,,,test,sda-all,samples/GSE348584/GSM10075605,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.97, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM10075606,breast,disease,ductal breast carcinoma in situ,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,69849,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0005023,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000092760554089,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075606,,,test,sda-all,samples/GSE348584/GSM10075606,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075607,breast,disease,ductal breast carcinoma in situ,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,127565,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0005023,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.49996592148309704,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075607,,,test,sda-all,samples/GSE348584/GSM10075607,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.9400000000000001, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075608,breast,disease,ductal breast carcinoma in situ,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,33105,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0005023,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.49998085532516495,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075608,,,test,sda-all,samples/GSE348584/GSM10075608,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075609,breast,disease,ductal breast carcinoma in situ,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,73089,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0005023,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.49998873281754674,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075609,,,test,sda-all,samples/GSE348584/GSM10075609,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075610,breast,disease,ductal breast carcinoma in situ,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,95945,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0005023,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.500011256190905,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075610,,,test,sda-all,samples/GSE348584/GSM10075610,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075611,breast,disease,ductal breast carcinoma in situ,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,58675,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0005023,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000056420672534,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075611,,,test,sda-all,samples/GSE348584/GSM10075611,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075612,breast,disease,ductal breast carcinoma in situ,breast,tumour tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,144344,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,MONDO:0005023,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075612,,,test,sda-all,samples/GSE348584/GSM10075612,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 1.0, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075613,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,66080,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999782847215872,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075613,,,test,sda-all,samples/GSE348584/GSM10075613,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075614,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,188199,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.49999254552961137,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075614,,,test,sda-all,samples/GSE348584/GSM10075614,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 0.99, ""disease_status"": 0.97, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075615,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,292034,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999905615046677,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075615,,,test,sda-all,samples/GSE348584/GSM10075615,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.89, ""uberon"": 1.0, ""life_stage"": 0.99}",,
GSM10075616,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,213768,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.5000070821529745,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075616,,,test,sda-all,samples/GSE348584/GSM10075616,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075617,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,60690,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.49999727846723263,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075617,,,test,sda-all,samples/GSE348584/GSM10075617,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.9500000000000001, ""uberon"": 1.0, ""life_stage"": 1.0}",,
GSM10075618,breast,normal,,breast,primary tissue,Homo sapiens,human,not stated,unknown,Xenium,Xenium,True,fluorescence: DAPI,198205,A single cell and spatial atlas of preinvasive breast cancer,GSE348584,GSE348584,9606,Homo sapiens,9606,,False,False,GEO organism field,Homo sapiens,Homo sapiens,luna,UBERON:0000310,breast,,luna,,,luna,not stated,,not stated,,,,,,release v3,imaging-based,xenium,,,cell,541,counts,um,1.0,verified,0.4999956440301433,VERIFIED,VERIFIED,VERIFIED,,,VERIFIED,PASS,,,,,GSM10075618,,,test,sda-all,samples/GSE348584/GSM10075618,sda-tissue-disease-2.3,"{""organ"": 1.0, ""sample_kind"": 1.0, ""disease_status"": 0.99, ""uberon"": 1.0, ""life_stage"": 0.99}",,