# Data licenses and attribution

This repository aggregates transformed records from multiple sources. It does not replace or override upstream terms.

| Files | Source | Terms / attribution |
| --- | --- | --- |
| `processed/sciplex3_all.pt` | SciPlex3, GSE139944; harmonized by scPerturb | Cite Srivatsan et al. (2020) and scPerturb; retain the scPerturb Zenodo record's CC BY 4.0 attribution |
| `processed/cd34_all.pt` | GSE306429, ILD1-011 CD34+ | Cite GSE306429 and its associated publication; NCBI policies and submitter terms apply |
| `processed/frangieh_hvg.npz` | Frangieh et al. (2021), SCP1064; harmonized by scPerturb | Cite Frangieh et al. and scPerturb; retain the scPerturb Zenodo record's CC BY 4.0 attribution |
| `annotation/drug_annotation_master.csv` | SciPlex3, ChEMBL, PubChem and DrugCentral | Retain source attribution; ChEMBL portions are CC BY-SA 3.0 and DrugCentral portions are CC BY-SA 4.0 |
| `annotation/drugcentral_target_annotations.parquet` | DrugCentral | CC BY-SA 4.0; cite DrugCentral |

Source pages:

- SciPlex3 GEO: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE139944
- CD34+ GEO: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306429
- Frangieh Broad SCP: https://singlecell.broadinstitute.org/single_cell/study/SCP1064
- scPerturb Zenodo: https://doi.org/10.5281/zenodo.13350497
- ChEMBL licensing: https://www.ebi.ac.uk/chembl/
- DrugCentral licensing: https://drugcentral.org/privacy
- PubChem usage information: https://pubchem.ncbi.nlm.nih.gov/docs/programmatic-access

PopRetrieve's original selection, normalization, packaging and documentation are provided for research reproducibility. No additional rights are granted over upstream data.