#!/usr/bin/env python3 """Evaluate MDU-RiskBench participant-level prediction JSONL.""" from __future__ import annotations import argparse import gzip import json import math from collections import Counter from pathlib import Path ORDER = { "no_observed_risk": 0, "mild_risk": 1, "moderate_risk": 2, "high_risk": 3, } ABSTAIN = "insufficient_evidence" def read_jsonl(path: Path): opener = gzip.open if path.suffix == ".gz" else open with opener(path, "rt", encoding="utf-8") as handle: for line in handle: if line.strip(): yield json.loads(line) def main() -> None: parser = argparse.ArgumentParser() parser.add_argument("--gold", type=Path, required=True) parser.add_argument("--predictions", type=Path, required=True) parser.add_argument("--output", type=Path) args = parser.parse_args() gold = { row["sample_id"]: row["target_label"]["risk_level"] for row in read_jsonl(args.gold) } pred = {row["sample_id"]: row["risk_level"] for row in read_jsonl(args.predictions)} unknown = sorted(set(pred) - set(gold)) if unknown: raise SystemExit(f"unknown prediction IDs: {unknown[:5]}") labels = list(ORDER) total = len(gold) covered = [(gold[sid], pred.get(sid)) for sid in gold if pred.get(sid) in ORDER] abstained = total - len(covered) exact = sum(actual == predicted for actual, predicted in covered) distances = [abs(ORDER[actual] - ORDER[predicted]) for actual, predicted in covered] squared = [value * value for value in distances] f1_values = [] for label in labels: tp = sum(actual == label and predicted == label for actual, predicted in covered) fp = sum(actual != label and predicted == label for actual, predicted in covered) fn = sum(actual == label and predicted != label for actual, predicted in covered) precision = tp / (tp + fp) if tp + fp else 0.0 recall = tp / (tp + fn) if tp + fn else 0.0 f1_values.append( 2 * precision * recall / (precision + recall) if precision + recall else 0.0 ) n = len(covered) report = { "gold_records": total, "prediction_records": len(pred), "covered_records": n, "abstained_or_missing_records": abstained, "coverage": n / total if total else 0.0, "selective_accuracy": exact / n if n else None, "selective_macro_f1": sum(f1_values) / len(f1_values) if n else None, "ordinal_mae": sum(distances) / n if n else None, "ordinal_rmse": math.sqrt(sum(squared) / n) if n else None, "prediction_distribution": dict(sorted(Counter(pred.values()).items())), } rendered = json.dumps(report, indent=2) + "\n" if args.output: args.output.write_text(rendered, encoding="utf-8") print(rendered, end="") if __name__ == "__main__": main()