from pathlib import Path import random from statistics import mean import numpy as np import torch from torch import nn from tqdm import tqdm from torch.utils.data import DataLoader from easyfsl.utils import evaluate import argparse import os import re import time from torch.optim import SGD, Optimizer from torch.optim.lr_scheduler import MultiStepLR from glob import glob from itertools import chain, combinations, permutations def powerset(iterable): "powerset([1,2,3]) --> () (1,) (2,) (3,) (1,2) (1,3) (2,3) (1,2,3)" s = list(iterable) return chain.from_iterable(combinations(s, r) for r in range(len(s)+1)) torch.autograd.set_detect_anomaly(True) device = torch.device('cuda' if torch.cuda.is_available() else 'cpu') print(device) parser = argparse.ArgumentParser() parser.add_argument('--run_num', help='Number for Identifying train folder', required=True) parser.add_argument('--timestamps', help='Frequency for saving Weights and Validation', required=False, default=5) parser.add_argument('--epochs', help='Number of epochs', required=False, default=5) parser.add_argument('--norm', help='0: No norm, 1: Subtract minimum to get positive values', required=False, default="1") parser.add_argument('--multi', help='If 1, use multiclass training else use binary', required=False, default="1") parser.add_argument('--addlayer', help='layer(s) to add after resnet', required=False, default="dense") args = parser.parse_args() train_num = int(args.run_num) timestamps = int(args.timestamps) epochs = int(args.epochs) norm_type = int(args.norm) use_multi = int(args.multi) additional_layer = args.addlayer # Params # The assumption is, that the dataset is stored in base_path + "GNSS_dataset" base_path_data = "../../Spectrum_Highway1/" base_path = "./" train_file = base_path_data + "GNSS_dataset/train.txt" adap_file = base_path_data + "GNSS_dataset/adap.txt" if norm_type == 0: norm_data = None elif norm_type == 1: norm_data = [-135.99690198, 0.] time_size = 243 # ----------- # # Create Folders # The post training weights and logs will be saved in the already existing path base_path + "results_episodic + x" + "post" train_output_folder = "results_episodic" if additional_layer != "None": train_output_folder += "_" + additional_layer if not use_multi: train_output_folder += "_binary" cur_folders = glob(base_path + train_output_folder + "/%06d_202*-*" % train_num) if len(cur_folders) == 0: print("No Training with number %d found for: " % train_num, additional_layer, " Multi: " + str(use_multi)) exit() base_path_train = cur_folders[0] print("Running: ", train_num, timestamps, epochs, norm_type, use_multi, additional_layer) if not os.path.exists(base_path_train + "/post"): os.mkdir(base_path_train + "/post") os.mkdir(base_path_train + "/post/weights") else: print("Already proccessing on another node") #exit() outputWeightspath = base_path_train + "/post/weights/" log_loss = open(base_path_train + "/post/loss.txt", "w") log = open(base_path_train + "/post/log.txt", "w") random_seed = int(base_path_train.split("/")[-1].split("_")[-6]) # ------------ # # Make deterministic # np.random.seed(random_seed) torch.manual_seed(random_seed) random.seed(random_seed) torch.backends.cudnn.deterministic = True torch.backends.cudnn.benchmark = False # ------------------ # # Create Train Test data lists new_classes = np.array([3, 6, 8, 9]) old_classes = list(set(np.arange(11)) - set(new_classes)) print("New classes: ", new_classes, " Old classes: ", old_classes) class_permutations = list(permutations(new_classes)) # Post train on every combination and order of new classes print("Train File: ", train_file) with open(train_file, "r") as f: train_info = f.readlines() train_info = [x.split("\n")[0].split("\t") for x in train_info] print("Adaptation File: ", adap_file) with open(adap_file, "r") as f: adap_info = f.readlines() adap_info = [x.split("\n")[0].split("\t") for x in adap_info] data_info = train_info data_info.extend(adap_info) import utilities if use_multi: train_list_raw, valid_list_raw, train_y_raw, valid_y_raw, num_classes = utilities.get_training_data(data_info) else: train_list_raw, valid_list_raw, train_y_raw, valid_y_raw, num_classes = utilities.get_training_data(data_info, reduce_to_binary=True) train_list = [] valid_list = [] train_y = [] valid_y = [] for ti, tlr in enumerate(train_list_raw): # add_folder = ("data/%02d" % (int(tlr.split("/")[-1].split(".npy")[0]) // 15000)) + "/" + tlr.split("/")[-1] add_folder = ("data/" + tlr.split("/")[-1] for i in range(4): train_list.append([base_path_data + "GNSS_dataset/" + add_folder, i]) train_y.append(train_y_raw[ti]) for vi, vlr in enumerate(valid_list_raw): # add_folder = ("data/%02d" % (int(vlr.split("/")[-1].split(".npy")[0]) // 15000)) + "/" + vlr.split("/")[-1] add_folder = ("data/" + vlr.split("/")[-1] for i in range(4): valid_list.append([base_path_data + "GNSS_dataset/" + add_folder, i]) valid_y.append(valid_y_raw[vi]) # -------------------------- # # ------------------------------ Select Base starting weights ---------------------------------------- # wm = re.compile(r'.*/weights/(?P\d{1,6}).h5') weights = glob(base_path_train + "/weights/*") weights.sort(key=lambda x: int(wm.match(x).group(1))) if len(weights) == 0: print("Skipped %d: Training not finished." % training_num) exit() # For getting best weights --- # log_train_file = glob(base_path_train + "/log.txt")[0] with open(log_train_file, "r") as f: log_train_info = f.readlines() log_accs = np.array([float(x.split("\n")[0].split(" ")[-1]) for x in log_train_info]) weights_ind_best = np.argmax(log_accs) # ---------------------------- # base_startweight = weights[weights_ind_best] # ---------------------------------------------------------------------------------------------------- # class extract_tensor(nn.Module): # For extracting the tensor from an lstm output def forward(self,x): # Output shape (batch, features, hidden) tensor, _ = x return tensor class TransposeB(torch.nn.Module): def forward(self, x): x = torch.transpose(x, 1, 0) return x class TransposeT(torch.nn.Module): def forward(self, x): x = torch.transpose(x, 2, 1) return x class multihead_Attention(nn.Module): def __init__(self, embeded_dim, num_heads): super().__init__() self.attention = nn.MultiheadAttention(embeded_dim, num_heads, batch_first=True) def forward(self,x): x, _ = self.attention(x, x, x) return x # Create Model from torchvision.models import resnet18 model = resnet18() if additional_layer == "dense": model.fc = nn.Linear(512, 512) elif additional_layer == "lstm": model.avgpool = nn.AdaptiveAvgPool2d((8, 1)) model.use_flatten = False model.fc = nn.Sequential(nn.Flatten(start_dim=-2), nn.LSTM(8, 8, batch_first=True), extract_tensor(), nn.AdaptiveAvgPool1d(1), nn.Flatten()) elif additional_layer == "multiheadattention": model.avgpool = nn.AdaptiveAvgPool2d((8, 1)) model.use_flatten = False model.fc = nn.Sequential(nn.Flatten(start_dim=-2), multihead_Attention(8, 8), nn.AdaptiveAvgPool2d(1), nn.Flatten()) elif additional_layer == "conv": model.avgpool = nn.AdaptiveAvgPool2d((16, 1)) # Shape: (BS, 512, 16, 1) model.use_flatten = False model.fc = nn.Sequential(nn.Flatten(start_dim=-2), nn.Conv1d(512, 512, 4), nn.AdaptiveAvgPool1d(1), nn.Flatten()) elif additional_layer == "TSiT": from tsai.models.TSiTPlus import TSiTPlus model.avgpool = nn.AdaptiveAvgPool2d((16, 1)) # -> (BS, 512, 16, 1) model.use_flatten = False model.fc = nn.Sequential(nn.Flatten(start_dim=-2), # -> (BS, 512, 16) TransposeT(), # -> (BS, 16, 512) TSiTPlus(16, 16, seq_len=512, d_model=32, depth=3)) # -> (BS, 16) elif additional_layer == "gMLP": from tsai.models.gMLP import gMLP model.avgpool = nn.AdaptiveAvgPool2d((16, 1)) # -> (BS, 512, 16, 1) model.use_flatten = False model.fc = nn.Sequential(nn.Flatten(start_dim=-2), # -> (BS, 512, 16) TransposeT(), # -> (BS, 16, 512) gMLP(16, 16, seq_len=512, d_model=32, depth=3)) # -> (BS, 16) elif additional_layer == "autoencoder": model.fc = nn.Sequential(nn.Linear(512, 128), nn.ReLU(), nn.Linear(128, 32), nn.ReLU(), nn.Linear(32, 8), nn.Linear(8, 32), nn.ReLU(), nn.Linear(32, 128), nn.ReLU(), nn.Linear(128, 512)) else: model.use_fc = False for ci, child in enumerate(model.children()): # freezes all layers up to and including the averaging layer -> (BS, 512, 1, 1) if ci < 9: for param in child.parameters(): param.requires_grad = False model.train() model = model.to(device) from easyfsl.methods import FewShotClassifier from easyfsl.methods import PrototypicalNetworks few_shot_classifier = PrototypicalNetworks(model).to(device) from easyfsl.samplers import TaskSampler # ---------- # for cpi, classes in enumerate(class_permutations): # Iterate over all class permutations print("Dealing with class permutation: ", classes) prev_classes = [] for cpj, cclass in enumerate(classes): # Add each class in the current permutation one by one print("Dealing with current class: ", cclass) if len(prev_classes) == 0: prev_weights = base_startweight new_weights = outputWeightspath + str(cclass) + ".h5" else: prev_weights = outputWeightspath + "_".join(prev_classes) + ".h5" new_weights = outputWeightspath + "_".join(prev_classes) + "_" + str(cclass) + ".h5" prev_classes.append(str(cclass)) if os.path.exists(new_weights): # Skip if previous permutations already covered the current order print("Skipped new class: ", cclass, " It already exists.") continue num_classes = len(old_classes) + len(prev_classes) cur_classes = old_classes + [int(c) for c in prev_classes] if len(prev_classes) == 1: few_shot_classifier.backbone.load_state_dict(torch.load(prev_weights, map_location=device)) else: few_shot_classifier.backbone.fc.load_state_dict(torch.load(prev_weights, map_location=device)) train_optimizer = SGD(few_shot_classifier.parameters(), lr=1e-2, momentum=0.9, weight_decay=5e-4) train_scheduler = MultiStepLR(train_optimizer, milestones=[120, 160], gamma=0.1) criterion = torch.nn.CrossEntropyLoss().to(device) print("Current classes: ", cur_classes) cur_train_list = [tl for ti, tl in enumerate(train_list) if train_y[ti] in cur_classes] cur_train_y = [ty for ty in train_y if ty in cur_classes] cur_valid_list = [vl for vi, vl in enumerate(valid_list) if valid_y[vi] in cur_classes] cur_valid_y = [vy for vy in valid_y if vy in cur_classes] def training_epoch(model: FewShotClassifier, data_loader: DataLoader, optimizer: Optimizer, method : str = "prototypical"): all_loss = [] model.train() with tqdm( enumerate(data_loader), total=len(data_loader), desc="Training" ) as tqdm_train: for episode_index, ( support_images, support_labels, query_images, query_labels, _, ) in tqdm_train: optimizer.zero_grad() model.process_support_set( support_images.to(device), support_labels.to(device) ) classification_scores = model(query_images.to(device)) # Added to deal with different losses for different fewshot methods ------------------------------------- # if method == "simpleshot" or method == "bdcspn": classification_scores = (torch.clamp(classification_scores, min=-0.1) + 0.1) / 1.1 if method == "simpleshot" or method == "bdcspn" or method == "relation" or method == "laplacianshot": query_labels = torch.nn.functional.one_hot(query_labels, num_classes=num_classes).float() # ------------------------------------------------------------------------------------------------------- # loss = criterion(classification_scores, query_labels.to(device)) loss.backward() optimizer.step() all_loss.append(loss.item()) tqdm_train.set_postfix(loss=mean(all_loss)) return mean(all_loss) # For validation -------------------------------------------------------------------- # n_way = num_classes n_shot = 1 if use_multi: n_query = 1 else: n_query = 9 n_validation_tasks = 250 val_set = utilities.val_set(cur_valid_list, cur_valid_y, time_size, norm=norm_data, norm_type=norm_type) val_sampler = TaskSampler( val_set, n_way=n_way, n_shot=n_shot, n_query=n_query, n_tasks=n_validation_tasks ) val_loader = DataLoader( val_set, batch_sampler=val_sampler, num_workers=1, pin_memory=True, collate_fn=val_sampler.episodic_collate_fn, ) # ----------------------------------------------------------------------------------- # # For training -------------------------------------------------------------------- # n_shot_tr = 2 if use_multi: n_query_tr = 3 else: n_query_tr = 20 n_tasks_per_epoch = 250 train_set = utilities.val_set(cur_train_list, cur_train_y, time_size, norm=norm_data, norm_type=norm_type) train_sampler = TaskSampler( train_set, n_way=n_way, n_shot=n_shot_tr, n_query=n_query_tr, n_tasks=n_tasks_per_epoch ) train_loader = DataLoader( train_set, batch_sampler=train_sampler, num_workers=1, pin_memory=True, collate_fn=train_sampler.episodic_collate_fn, ) # --------------------------------------------------------------------------------- # for e in range(epochs): print("Epoch: %d/%d" % (e, epochs)) average_loss = training_epoch(few_shot_classifier, train_loader, train_optimizer) log_loss.write("%f\n" % average_loss) log_loss.flush() if (e + 1) % int(timestamps) == 0: few_shot_classifier.eval() validation_accuracy = evaluate( few_shot_classifier, val_loader, device=device, tqdm_prefix="Validation" ) print('Valid Acc: %.5f' % validation_accuracy) log.write("Valid Acc: %.5f" % validation_accuracy + "\t" + "_".join(prev_classes) + "\n") log.flush() torch.save(few_shot_classifier.backbone.fc.state_dict(), new_weights) few_shot_classifier.train() log.close() log_loss.close() print("Done")