from pathlib import Path import random from statistics import mean import numpy as np import torch from torch import nn from tqdm import tqdm from torch.utils.data import DataLoader import argparse import os import time import torch.optim as optim from glob import glob import re import utilities import matplotlib.pyplot as plt from itertools import chain, combinations import argparse def to_softmax(inarr): return np.exp(inarr)/np.sum(np.exp(inarr), axis=1)[:, None] def powerset(iterable): "powerset([1,2,3]) --> () (1,) (2,) (3,) (1,2) (1,3) (2,3) (1,2,3)" s = list(iterable) return chain.from_iterable(combinations(s, r) for r in range(len(s)+1)) torch.autograd.set_detect_anomaly(True) device = torch.device('cuda' if torch.cuda.is_available() else 'cpu') print(device) parser = argparse.ArgumentParser() parser.add_argument('--run_num', help='Number for Identifying created folders', required=True) parser.add_argument('--multi', help='If 0: Test on binaryclass training. If 1: Test on multiclass training', required=False, default=1) parser.add_argument('--addlayer', help='layer(s) to add after resnet', required=False, default="conv") parser.add_argument('--triplets', help='Whether to use triplet loss 0: No, 1: Yes, 2: Quadruplet loss', required=False, default="0") args = parser.parse_args() training_num = int(args.run_num) use_multiclass_training = int(args.multi) additional_layer = args.addlayer use_triplets = int(args.triplets) # Hyper Params base_path_data = "../../Spectrum_Highway1/" base_path = "./" test_file = base_path_data + "GNSS_dataset/test.txt" norm_data = [-135.99690198, 0.] batchSize = 40 time_size = 243 # ----------- # # Data folders # The test results will be saved in the already existing path base_path + "results_episodic + x" + "test" train_output_folder = base_path + "results_episodic" if additional_layer != "None": train_output_folder += "_" + additional_layer if not use_multiclass_training: train_output_folder += "_binary" if use_triplets == 1: train_output_folder += "_triplet" elif use_triplets == 2: train_output_folder += "_quadruplet" print(train_output_folder + "/%06d_202*" % training_num) folder = glob(train_output_folder + "/%06d_202*" % training_num)[0] fewshot_method = folder.split("_")[-3] new_classes = np.array([3, 6, 8, 9]) old_classes = np.array(list(set(np.arange(11)) - set(new_classes))) print("New classes: ", new_classes) additional_classes = [3 + np.array(list(x)).astype(int) for x in list(powerset("".join((new_classes - 3).astype("str"))))] # ---------- # # Support Data --------------- # with open(base_path_data + "GNSS_dataset/support_set.txt", "r") as f: support_info = f.readlines() # support_list = {int(si.split("\n")[0].split("\t")[-1]): [base_path_data + ("GNSS_dataset/data/%02d/" % (int(si.split(".npy")[0].split("/")[1]) // 15000)) + si.split("\t")[0].split("/")[1]] for si in support_info} support_list = {int(si.split("\n")[0].split("\t")[-1]): [base_path_data + "GNSS_dataset/data/" + si.split("\t")[0].split("/")[1]] for si in support_info} # ---------------------------- # wm = re.compile(r'.*/weights/(?P\d{1,6}).h5') wm_fs = re.compile(r'.*/weights/(?P\d{1,6})_fs.h5') if fewshot_method == "prototypical" or fewshot_method == "simpleshot": weights = glob(folder + "/weights/*") weights.sort(key=lambda x: int(wm.match(x).group(1))) elif fewshot_method == "relation" or fewshot_method == "bdcspn" or fewshot_method == "FEAT" or fewshot_method == "laplacianshot" or fewshot_method == "matchingnetworks": weights = glob(folder + "/weights/*_fs.h5") weights.sort(key=lambda x: int(wm_fs.match(x).group(1))) else: print("Invalid fewshot method: ", fewshot_method) exit() if len(weights) == 0: print("Skipped %d: Training not finished." % training_num) exit() if not os.path.exists(folder + "/test/"): os.makedirs(folder + "/test/") else: print("Skipped %d: Already Tested." % training_num) exit() # For getting best weights --- # log_train_file = glob(folder + "/log.txt")[0] with open(log_train_file, "r") as f: log_train_info = f.readlines() log_accs = np.array([float(x.split("\n")[0].split(" ")[-1]) for x in log_train_info]) # ---------------------------- # startweight = weights[np.argmax(log_accs)] print(startweight) # Create Test data lists -------------- # with open(test_file, "r") as f: test_info = f.readlines() test_info = np.array([x.split("\n")[0].split("\t") for x in test_info]) test_list_raw = test_info[:, 0] test_classes = test_info[:, 1].astype(int) test_list = [] for tlr in test_list_raw: # add_folder = ("data/%02d" % (int(tlr.split("/")[-1].split(".npy")[0]) // 15000)) + "/" + tlr.split("/")[-1] add_folder = ("data/" + tlr.split("/")[-1] test_list.append(base_path_data + "GNSS_dataset/" + add_folder) # ------------------------------------- # class extract_tensor(nn.Module): # For extracting the tensor from an lstm output def forward(self,x): # Output shape (batch, features, hidden) tensor, _ = x return tensor class TransposeB(torch.nn.Module): def forward(self, x): x = torch.transpose(x, 1, 0) return x class TransposeT(torch.nn.Module): def forward(self, x): x = torch.transpose(x, 2, 1) return x class multihead_Attention(nn.Module): def __init__(self, embeded_dim, num_heads): super().__init__() self.attention = nn.MultiheadAttention(embeded_dim, num_heads, batch_first=True) def forward(self,x): x, _ = self.attention(x, x, x) return x # Create Model and load weights --------------------------------------------------------------- # from torchvision.models import resnet18 model = resnet18() if additional_layer == "dense": model.fc = nn.Linear(512, 512) elif additional_layer == "lstm": model.avgpool = nn.AdaptiveAvgPool2d((8, 1)) model.use_flatten = False model.fc = nn.Sequential(nn.Flatten(start_dim=-2), nn.LSTM(8, 8, batch_first=True), extract_tensor(), nn.AdaptiveAvgPool1d(1), nn.Flatten()) elif additional_layer == "multiheadattention": model.avgpool = nn.AdaptiveAvgPool2d((8, 1)) model.use_flatten = False model.fc = nn.Sequential(nn.Flatten(start_dim=-2), multihead_Attention(8, 8), nn.AdaptiveAvgPool2d(1), nn.Flatten()) elif additional_layer == "conv": model.avgpool = nn.AdaptiveAvgPool2d((16, 1)) # Shape: (BS, 512, 16, 1) model.use_flatten = False model.fc = nn.Sequential(nn.Flatten(start_dim=-2), nn.Conv1d(512, 512, 4), nn.AdaptiveAvgPool1d(1), nn.Flatten()) elif additional_layer == "TSiT": from tsai.models.TSiTPlus import TSiTPlus model.avgpool = nn.AdaptiveAvgPool2d((16, 1)) # -> (BS, 512, 16, 1) model.use_flatten = False model.fc = nn.Sequential(nn.Flatten(start_dim=-2), # -> (BS, 512, 16) TransposeT(), # -> (BS, 16, 512) TSiTPlus(16, 16, seq_len=512, d_model=32, depth=3)) # -> (BS, 16) elif additional_layer == "gMLP": from tsai.models.gMLP import gMLP model.avgpool = nn.AdaptiveAvgPool2d((16, 1)) # -> (BS, 512, 16, 1) model.use_flatten = False model.fc = nn.Sequential(nn.Flatten(start_dim=-2), # -> (BS, 512, 16) TransposeT(), # -> (BS, 16, 512) gMLP(16, 16, seq_len=512, d_model=32, depth=3)) # -> (BS, 16) elif additional_layer == "autoencoder": model.fc = nn.Sequential(nn.Linear(512, 128), nn.ReLU(), nn.Linear(128, 32), nn.ReLU(), nn.Linear(32, 8), nn.Linear(8, 32), nn.ReLU(), nn.Linear(32, 128), nn.ReLU(), nn.Linear(128, 512)) else: model.use_fc = False if fewshot_method == "prototypical" or fewshot_method == "simpleshot": model.load_state_dict(torch.load(startweight, map_location=device)) model.eval() if fewshot_method == "prototypical": from easyfsl.methods import PrototypicalNetworks few_shot_classifier = PrototypicalNetworks(model).to(device) elif fewshot_method == "simpleshot": from easyfsl.methods import SimpleShot few_shot_classifier = SimpleShot(model).to(device) elif fewshot_method == "relation": from easyfsl.methods import RelationNetworks few_shot_classifier = RelationNetworks(backbone=model, feature_dimension=512).to(device) model.use_flatten = False elif fewshot_method == "bdcspn": from easyfsl.methods import BDCSPN few_shot_classifier = BDCSPN(model).to(device) elif fewshot_method == "FEAT": from easyfsl.methods import FEAT wp = "./feat-1-shot.pth" few_shot_classifier = FEAT.from_resnet12_checkpoint(checkpoint_path=wp).to(device) elif fewshot_method == "laplacianshot": from easyfsl.methods import LaplacianShot few_shot_classifier = LaplacianShot(model).to(device) elif fewshot_method == "matchingnetworks": from easyfsl.methods import MatchingNetworks few_shot_classifier = MatchingNetworks(model, feature_dimension=512).to(device) else: print("Invalid fewshot method: ", fewshot_method) exit() if fewshot_method == "relation" or fewshot_method == "bdcspn" or fewshot_method == "FEAT" or fewshot_method == "laplacianshot" or fewshot_method == "matchingnetworks": few_shot_classifier.load_state_dict(torch.load(startweight, map_location=device)) few_shot_classifier.eval() # --------------------------------------------------------------------------------------------- # save_file = folder + "/test/summary.txt" save_file_all_vals = folder + "/test/preds_" save_file_all_vals_ind = folder + "/test/inds_" results = [] for ai, add_class in enumerate(additional_classes): # Calculate the results for every combination of additional classes print("Dealing with classes: ", ai, add_class) cur_classes = np.concatenate([old_classes, add_class]) cur_classes.sort() cur_support_list_files = [] cur_support_list_classes = [] for ci, cc in enumerate(cur_classes): cur_support_list_files.extend(support_list[cc]) cur_support_list_classes.extend([ci] * len(support_list[cc])) cur_support_list = [cur_support_list_files, cur_support_list_classes] # Prepare support images # support_images, support_labels = utilities.get_support_data(cur_support_list, time_size, norm=norm_data, norm_type=1) support_images = torch.tensor(support_images).to(device) support_labels = torch.tensor(support_labels).to(device) few_shot_classifier.process_support_set(support_images, support_labels) # ---------------------- # # -------------------------- # datagen = utilities.gen_data_batch_test(test_list, test_classes, time_size, batchSize, norm=norm_data, norm_type=1) pred = [] lab = [] inds = [] bcount = 0 for X_batch, Y_batch, ind_batch in datagen: if bcount % 100 == 0: print("Dealing with batch: %d" % bcount) bcount += 1 inputs = torch.tensor(X_batch).to(device) out = few_shot_classifier(inputs).float() pred_x = out.detach().cpu().numpy() pred.extend(pred_x) lab.extend(Y_batch) inds.extend(ind_batch) del inputs, out pred = np.array(pred) lab = np.array(lab) inds = np.array(inds) np.save(save_file_all_vals + "_".join(cur_classes.astype(str)) + ".npy", pred) np.save(save_file_all_vals_ind + "_".join(cur_classes.astype(str)) + ".npy", inds) pred = to_softmax(pred) # reduce same inds -- # # Each sample is predicted on 4 times. The 4 predictions correspond to horizontal and vertical flipping of the sample pred_red_arg = [] pred_red = [] lab_red = [] cpred_arg = np.zeros(len(cur_classes)) cpred = np.zeros(len(cur_classes)) clab = [] cind = inds[0] for icind, ccind in enumerate(inds): if ccind == cind: cpred += pred[icind] cpred_arg[np.argmax(pred[icind])] += 1 clab.append(lab[icind]) else: cind = ccind pred_red.append(cpred) pred_red_arg.append(cpred_arg) lab_red.append(np.sum(clab) / len(clab)) cpred = np.zeros(len(cur_classes)) cpred_arg = np.zeros(len(cur_classes)) cpred += pred[icind] cpred_arg[np.argmax(pred[icind])] += 1 clab = [lab[icind]] pred_red.append(cpred) pred_red_arg.append(cpred_arg) lab_red.append(np.sum(clab) / len(clab)) pred = np.array(pred_red) pred_arg = np.array(pred_red_arg) lab = np.array(lab_red) # ------------------- # # Calcualte the results for the binary case of jammer/no jammer # lab_bool = lab > 2 pred_bool = np.argmax(pred, axis=1) > 2 pred_arg_bool = np.sum(pred_arg[:, 3:], axis=1) > 0 acc = np.mean(pred_bool == lab_bool) true_positives = np.sum(pred_bool * lab_bool) true_negatives = np.sum((~pred_bool) * (~lab_bool)) false_positives = np.sum(pred_bool * (~lab_bool)) false_negatives = np.sum((~pred_bool) * lab_bool) precision = true_positives/(true_positives + false_positives) recall = true_positives/(true_positives + false_negatives) f1_score = (2 * precision * recall) / (precision + recall) f2_score = ((1 + 2**2) * precision * recall) / (2**2 * precision + recall) print('Test Acc Prob: %.5f, F1: %.5f, F2: %.5f, Prec: %.5f, Rec: %.5f' % (acc, f1_score, f2_score, precision, recall)) results.append([acc, f1_score, f2_score, precision, recall, 1]) acc = np.mean(pred_arg_bool == lab_bool) true_positives = np.sum(pred_arg_bool * lab_bool) true_negatives = np.sum((~pred_arg_bool) * (~lab_bool)) false_positives = np.sum(pred_arg_bool * (~lab_bool)) false_negatives = np.sum((~pred_arg_bool) * lab_bool) precision = true_positives/(true_positives + false_positives) recall = true_positives/(true_positives + false_negatives) f1_score = (2 * precision * recall) / (precision + recall) f2_score = ((1 + 2**2) * precision * recall) / (2**2 * precision + recall) print('Test Acc Arg: %.5f, F1: %.5f, F2: %.5f, Prec: %.5f, Rec: %.5f' % (acc, f1_score, f2_score, precision, recall)) results.append([acc, f1_score, f2_score, precision, recall, 0]) with open(save_file, 'a') as f: f.write("Train\tAccuracy\tF1\tF2\tPrecision\tRecall\tUse Prob\n") for ir, res in enumerate(results): f.write("%d\t%.5f\t\t%.5f\t%.5f\t%.5f\t\t%.5f\t\t%d\n" % (ir, res[0], res[1], res[2], res[3], res[4], res[5])) print("Done")