{ "table_description": "This is the main metadata table provided by idc-index. Each row corresponds to a DICOM series, and contains attributes at the collection, patient, study, and series levels. The table also contains download-related attributes, such as the AWS S3 bucket and URL to download the series.", "columns": [ { "name": "collection_id", "type": "STRING", "mode": "NULLABLE", "description": "short string with the identifier of the collection the series belongs to" }, { "name": "analysis_result_id", "type": "STRING", "mode": "NULLABLE", "description": "this string is not empty if the specific series is part of an analysis results collection; analysis results can be added to a given collection over time" }, { "name": "PatientID", "type": "STRING", "mode": "NULLABLE", "description": "identifier of the patient within the collection (DICOM attribute)" }, { "name": "SeriesInstanceUID", "type": "STRING", "mode": "NULLABLE", "description": "" }, { "name": "StudyInstanceUID", "type": "STRING", "mode": "NULLABLE", "description": "unique identifier of the DICOM study (DICOM attribute)" }, { "name": "source_DOI", "type": "STRING", "mode": "NULLABLE", "description": "Digital Object Identifier of the dataset that contains the given series; follow this DOI to learn more about the activity that produced this series" }, { "name": "PatientAge", "type": "STRING", "mode": "NULLABLE", "description": "age of the subject at the time of imaging (DICOM attribute)" }, { "name": "PatientSex", "type": "STRING", "mode": "NULLABLE", "description": "subject sex (DICOM attribute)" }, { "name": "StudyDate", "type": "STRING", "mode": "NULLABLE", "description": "date of the study (de-identified) (DICOM attribute)" }, { "name": "StudyDescription", "type": "STRING", "mode": "NULLABLE", "description": "textual description of the study content (DICOM attribute)" }, { "name": "BodyPartExamined", "type": "STRING", "mode": "NULLABLE", "description": "body part imaged (not applicable for SM series) (DICOM attribute). For derived series (SEG, RTSTRUCT) this reflects the source acquisition, not the segmented anatomy -- what was segmented is recorded in the seg_index table (SegmentedPropertyType_CodeMeanings) and in rtstruct_index." }, { "name": "Modality", "type": "STRING", "mode": "NULLABLE", "description": "acquisition modality (DICOM attribute)" }, { "name": "SOPClassUID", "type": "STRING", "mode": "NULLABLE", "description": "SOP Class UID identifying the type of DICOM object (e.g., CT Image Storage, Segmentation Storage); more specific than Modality for distinguishing object types (DICOM attribute)" }, { "name": "sop_class_name", "type": "STRING", "mode": "NULLABLE", "description": "human-readable name of the SOP Class (e.g., \"CT Image Storage\", \"Segmentation Storage\"); derived from SOPClassUID" }, { "name": "TransferSyntaxUID", "type": "STRING", "mode": "NULLABLE", "description": "Transfer Syntax UID identifying the encoding of the stored instances (e.g., Explicit VR Little Endian, JPEG 2000, HTJ2K); comma-separated when a series contains instances with different encodings, which is common for SM (DICOM attribute)" }, { "name": "transfer_syntax_name", "type": "STRING", "mode": "NULLABLE", "description": "human-readable name of the Transfer Syntax (e.g., \"JPEG 2000\", \"Explicit VR Little Endian\"); comma-separated when a series contains instances with different encodings; derived from TransferSyntaxUID" }, { "name": "PhotometricInterpretation", "type": "STRING", "mode": "NULLABLE", "description": "intended interpretation of the pixel data, e.g., MONOCHROME2 (grayscale), RGB or YBR_FULL_422 (color); NULL for non-image objects (e.g., SEG, SR, RTSTRUCT); comma-separated when a series contains instances with different values (DICOM attribute)" }, { "name": "PixelRepresentation", "type": "STRING", "mode": "NULLABLE", "description": "data representation of pixel sample values: \"0\" for unsigned integers, \"1\" for signed integers; NULL for non-image objects; comma-separated when a series contains instances with different values (DICOM attribute)" }, { "name": "Manufacturer", "type": "STRING", "mode": "NULLABLE", "description": "manufacturer of the equipment that produced the series (DICOM attribute)" }, { "name": "ManufacturerModelName", "type": "STRING", "mode": "NULLABLE", "description": "model name of the equipment that produced the series (DICOM attribute)" }, { "name": "SeriesDate", "type": "STRING", "mode": "NULLABLE", "description": "date of the series (de-identified) (DICOM attribute)" }, { "name": "SeriesDescription", "type": "STRING", "mode": "NULLABLE", "description": "textual description of the series content (DICOM attribute)" }, { "name": "SeriesNumber", "type": "STRING", "mode": "NULLABLE", "description": "series number (DICOM attribute)" }, { "name": "instanceCount", "type": "INTEGER", "mode": "NULLABLE", "description": "number of instances in the series" }, { "name": "license_short_name", "type": "STRING", "mode": "NULLABLE", "description": "short name of the license that applies to this series" }, { "name": "series_init_idc_version", "type": "INTEGER", "mode": "NULLABLE", "description": "IDC data release version number when this series first appeared in IDC (integer, e.g., 1 for v1)" }, { "name": "series_revised_idc_version", "type": "INTEGER", "mode": "NULLABLE", "description": "IDC data release version number when this series was most recently revised in IDC (integer, e.g., 24 for v24)" }, { "name": "aws_bucket", "type": "STRING", "mode": "NULLABLE", "description": "name of the AWS S3 bucket that contains the series" }, { "name": "crdc_series_uuid", "type": "STRING", "mode": "NULLABLE", "description": "unique identifier of the series within the IDC" }, { "name": "series_aws_url", "type": "STRING", "mode": "NULLABLE", "description": "public AWS S3 URL to download the series in bulk (each instance is a separate file)" }, { "name": "series_size_MB", "type": "FLOAT", "mode": "NULLABLE", "description": "total size of the series in megabytes" } ] }