"""Shared CSV validation and non-overwriting output helpers.""" import argparse import os from contextlib import contextmanager from pathlib import Path import tempfile import numpy as np import pandas as pd def parser(description): return argparse.ArgumentParser(description=description) def require(df, columns): missing = set(columns) - set(df.columns) if missing: raise ValueError(f"Missing columns: {sorted(missing)}") def numeric(df, columns, integer=False): require(df, columns) for col in columns: values = pd.to_numeric(df[col], errors="raise") if not np.isfinite(values.to_numpy(dtype=float)).all(): raise ValueError(f"Non-finite values in {col}") if integer: if not (values == np.floor(values)).all(): raise ValueError(f"Non-integer values in {col}") values = values.astype("int64") df[col] = values def unique(df, keys): require(df, keys) if df[keys].isna().any().any() or df.duplicated(keys).any(): raise ValueError(f"Missing or duplicate keys: {keys}") def read_csv(path): df = pd.read_csv(path, encoding="utf-8-sig") if df.empty: raise ValueError(f"Empty input: {path}") return df @contextmanager def output_path(path): path = Path(path) if path.exists(): raise FileExistsError(f"Output exists; choose a new filename: {path}") path.parent.mkdir(parents=True, exist_ok=True) handle, temporary = tempfile.mkstemp(prefix=path.name + ".", dir=path.parent) os.close(handle) try: yield temporary if path.exists(): raise FileExistsError(path) os.replace(temporary, path) finally: if os.path.exists(temporary): os.unlink(temporary) def save_csv(df, path): with output_path(path) as temporary: df.to_csv(temporary, index=False, encoding="utf-8-sig") print(f"Saved {len(df):,} rows: {path}")