import argparse import csv import json from pathlib import Path import h5py import numpy as np MHB_ROOT = Path(__file__).resolve().parent.parent def main(): parser = argparse.ArgumentParser() parser.add_argument("data_dir", type=Path) args = parser.parse_args() data_dir = args.data_dir.expanduser().resolve() assert (data_dir / "waveforms.hdf5").is_file() assert (data_dir / "metadata.csv").is_file() with (data_dir / "metadata.csv").open("r", encoding="utf-8") as f: trace_names = {row["trace_name"] for row in csv.DictReader(f)} count = 0 with h5py.File(data_dir / "waveforms.hdf5", "r") as h5, \ (MHB_ROOT / "meta_data.jsonl").open("r", encoding="utf-8") as f: for line in f: if not line.strip(): continue record = json.loads(line) if record["task_name"] != "Iquique": continue trace_name = record["meta_data"]["trace_name"] assert trace_name in trace_names, f"Missing trace: {trace_name}" bucket, position = trace_name.split("$") index, channels, length = position.split(",") index, channels, length = int(index), int(channels[1:]), int(length[1:]) assert channels == 3 and length == record["input_ts"]["length"] assert record["id"] == f"{bucket.removeprefix('bucket')}_{index}_{channels}_{length}" signal = h5["data"][bucket][index, :channels, :length].T.astype(np.float32) assert signal.shape == (length, channels) dst = MHB_ROOT / record["input_ts"]["path"] assert dst.name == f"{record['id']}.npy" dst.parent.mkdir(parents=True, exist_ok=True) np.save(dst, signal) count += 1 assert count == 502, f"Expected 502, got {count}" print(f"Iquique: created {count} NPY files") if __name__ == "__main__": main()