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b/gdl_ct/256x256x128/gdl_0000.json new file mode 100644 index 0000000000000000000000000000000000000000..b91d8a272a8e541bba860cbd6b435501105966fe --- /dev/null +++ b/gdl_ct/256x256x128/gdl_0000.json @@ -0,0 +1,66 @@ +{ + "source": "data/DRP-462_crop/5DrySeg_crop_solid.npy", + "voxel_size_um": 2.05, + "shape": [ + 256, + 256, + 128 + ], + "crop_shape_zyx": [ + 128, + 256, + 256 + ], + "origin_zyx": [ + 2, + 771, + 652 + ], + "bob_transpose": [ + 1, + 2, + 0 + ], + "orientation": "slab (z, y, x) crop transposed (1, 2, 0) to bob porous3d default: flow axis x = last axis = GDL through-plane; x = 0 is slab z = origin", + "pre_opening_porosity": 0.69631, + "post_opening_porosity": 0.59625, + "closed_pore_voxels": 5388, + "post_fill_porosity": 0.59561, + "porosity_post": 0.59561, + "stats": { + "post_processing": { + "description": "ball(3) morphological opening of the pore space (closes throats with inscribed-sphere radius < 3 vox) + fill of face-disconnected dead pore pockets", + "opening_radius_vox": 3, + "closed_pore_voxels": 5388 + }, + "porosity": 0.59561, + "percolates_flow_axis": true, + "n_pores": 1752, + "n_throats": 4467, + "throat_inscribed_radius_vox": { + "n": 4467, + "mean": 3.754, + "std": 1.647, + "min": 1.0, + "p10": 1.414, + "p25": 2.828, + "median": 3.742, + "p75": 4.899, + "p90": 6.0, + "max": 10.296 + }, + "pore_inscribed_radius_vox": { + "n": 1752, + "mean": 4.838, + "std": 1.831, + "min": 1.0, + "p10": 2.828, + "p25": 3.464, + "median": 4.472, + "p75": 5.916, + "p90": 7.273, + "max": 14.036 + }, + "network_extraction": "porespy.networks.snow2 (boundary_width=0, voxel_size=1) on the post-processed geometry" + } +} \ No newline at end of file diff --git a/gdl_ct/256x256x128/gdl_0000_slices.csv b/gdl_ct/256x256x128/gdl_0000_slices.csv new file mode 100644 index 0000000000000000000000000000000000000000..74f3fde36a04ffcbe867d01694c29852242a29cc --- /dev/null +++ b/gdl_ct/256x256x128/gdl_0000_slices.csv @@ -0,0 +1,10 @@ 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